<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-11-20 23:08:00"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E250699" ref_strand="+" ref_description="SGN-E250699 [cLEG-7-K7]">
      <seq>ttatctgattttcttgttgtgatatagttagtataagatacgagcactagggaatgtaatttagttccttaagtgccaaagctattcaagaagggcaacaatctaagcatctcttcaaatgagcaatatctaaatgctatgttcaatgcaggttgggtgccccggtcattcaagtggtgttctgtacagtcaacaaggcagtactatgtttgtcttgttgctcattgacaaatttaatatgggtgtcaattctttcattttgtggtcctttcaagtggacaaatcttaaaaaaacaatataattggcaaagtgacatatttattattattatttttgaattaggaatatagaattagaaaattataatttttttgttaaacttgaatcggaatcttaactgggtgtttcacttaagaatggtgttaacatcctatgcatttaggattgtctttttgtgtttacagttaaccattgcatttatatttgtcatctcttaatccatttgcaccacccttcactaacattcacactttaaatataaaacaaaacacattcccacttcaaatatatgcaaaaacagaacacattcacactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="688" stop="1831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="937" g_stop="1531" g_length="595"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E250699" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E250699" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="937" e_stop="1531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCTGATTTGCTTTTTGTGATATAGTTTGTTTAAGATACCA-CACTATCCAATGTAATTTAGTTCCTTAAGTGCCAGAGCTATTCAAGAAGGGCAACAATCTAAGCATCTCTTCAAATGAGCAATAGCTAAATGCTATGTTCAATGCAGGTTGGGTGCCCCGGTCATTCAAGTGGTGTTCTGTACAGTCAACAAGGCAGTACTATGTTTGTCTTGTTGCTCATTGACAAATTTAATATGGGTGTCAATTCTTTCAGTTTGTGGTCCTTTCAAGTGGACAAATCTTAAAAAAACAATATAATTGGCAAAGTGACATATTTATTATTATTATTTTTGAATTAGGAATATAGAATTAGAAAATTATAATTTTTTTGTTAAACTTGAATCGGAATCTTAACTGGGTGTTTCACTTAAGAATGGTGTTAACATCCTATGCATTTAGGATTGTCTTTTTGTGTTTACAGTTAACCATTGCATTTATATTTGTCATCTTTTAATCCATTTGCACCACCCTTCACTAACATTCACACTTCAAATATAAAACAAAACACATTCACACTTCAAATATATGCAAAAACAGAACACATTCACACTT</genome_strand>
        <mrna_strand>TTATCTGATTTTCTTGTTGTGATATAGTTAGTATAAGATACGAGCACTAGGGAATGTAATTTAGTTCCTTAAGTGCCAAAGCTATTCAAGAAGGGCAACAATCTAAGCATCTCTTCAAATGAGCAATATCTAAATGCTATGTTCAATGCAGGTTGGGTGCCCCGGTCATTCAAGTGGTGTTCTGTACAGTCAACAAGGCAGTACTATGTTTGTCTTGTTGCTCATTGACAAATTTAATATGGGTGTCAATTCTTTCATTTTGTGGTCCTTTCAAGTGGACAAATCTTAAAAAAACAATATAATTGGCAAAGTGACATATTTATTATTATTATTTTTGAATTAGGAATATAGAATTAGAAAATTATAATTTTTTTGTTAAACTTGAATCGGAATCTTAACTGGGTGTTTCACTTAAGAATGGTGTTAACATCCTATGCATTTAGGATTGTCTTTTTGTGTTTACAGTTAACCATTGCATTTATATTTGTCATCTCTTAATCCATTTGCACCACCCTTCACTAACATTCACACTTTAAATATAAAACAAAACACATTCCCACTTCAAATATATGCAAAAACAGAACACATTCACACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E305692" ref_strand="+" ref_description="SGN-E305692 [cLEX-14-P4]">
      <seq>tcataaaagaaaagttgggtgccccggtcattcaagtggtgttctgtacagtcaacaaggcagtactatgtttgtcttgttgctcattgacaaatttaatatgggtgtcaattctttcagtttgtggtcctttcaagtggacaaatcttaaaaaaacaatataattggcaaagtgacatatttattattattatttttgaattaggaatatagaattagaaaattataatttttttgttaaacttgaatcggaatcttaactgggtgtttcacttaagaatggtgttaacatcctatgcatttaggattgtctttttgtgtttacagttaaccattgcatttatatttgtcatcttttaatccatttgcaccacccttcactaacattcacacttcaaatataaaacaaaacacattcacacttcaaatatatgcaaaaacagaacacattcacacttaaaattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="785" stop="1839"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1087" g_stop="1539" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="466" r_length="453" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E305692" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305692" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1087" e_stop="1539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGGTGCCCCGGTCATTCAAGTGGTGTTCTGTACAGTCAACAAGGCAGTACTATGTTTGTCTTGTTGCTCATTGACAAATTTAATATGGGTGTCAATTCTTTCAGTTTGTGGTCCTTTCAAGTGGACAAATCTTAAAAAAACAATATAATTGGCAAAGTGACATATTTATTATTATTATTTTTGAATTAGGAATATAGAATTAGAAAATTATAATTTTTTTGTTAAACTTGAATCGGAATCTTAACTGGGTGTTTCACTTAAGAATGGTGTTAACATCCTATGCATTTAGGATTGTCTTTTTGTGTTTACAGTTAACCATTGCATTTATATTTGTCATCTTTTAATCCATTTGCACCACCCTTCACTAACATTCACACTTCAAATATAAAACAAAACACATTCACACTTCAAATATATGCAAAAACAGAACACATTCACACTTAAAATTGC</genome_strand>
        <mrna_strand>GTTGGGTGCCCCGGTCATTCAAGTGGTGTTCTGTACAGTCAACAAGGCAGTACTATGTTTGTCTTGTTGCTCATTGACAAATTTAATATGGGTGTCAATTCTTTCAGTTTGTGGTCCTTTCAAGTGGACAAATCTTAAAAAAACAATATAATTGGCAAAGTGACATATTTATTATTATTATTTTTGAATTAGGAATATAGAATTAGAAAATTATAATTTTTTTGTTAAACTTGAATCGGAATCTTAACTGGGTGTTTCACTTAAGAATGGTGTTAACATCCTATGCATTTAGGATTGTCTTTTTGTGTTTACAGTTAACCATTGCATTTATATTTGTCATCTTTTAATCCATTTGCACCACCCTTCACTAACATTCACACTTCAAATATAAAACAAAACACATTCACACTTCAAATATATGCAAAAACAGAACACATTCACACTTAAAATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E268561" ref_strand="-" ref_description="SGN-E268561 [cLEI-13-B3]">
      <seq>tgcacgtgattggtaccaagatggattttgtagatgataaattgaggtctgagttcatttttattaatcccaactcgaaagggcaatgcggttgtggtgagtctttcatgacaacagccagtaaaggtgctgaaaagtgagatgattttaatgagacatgatgtttataatgtactcattaggtaggcgaacaatgaaataaagatttattcccagaattaaaatgttatatcttatacatgtctttgaattgtgtttattagatgtaaaaaattgccagtcttggcatttgtataatctactcccgctgatattccagaaatggaaagagtaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="1661" stop="3312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1961" g_stop="2006" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2007" i_stop="2721" i_length="715">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2722" g_stop="3012" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="337" r_length="291" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E268561" ref_strand="-">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268561" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="1961" e_stop="2006"/>
          <exon e_start="2722" e_stop="3012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACGTGATTGGTACCAAGATGGATTTTGTAGATGATAAATTGAGGTAAGGGATTTACTTGTCCGTTTCTATATTGTTGGTATTAAGCCTTTTAATTTTGTGTACAAGTGGATCATTTTGCTTTTGGATGAAAAGGACTGGAGACACCTAGTTTAAGTAATCTTACATATTTTGAACCCTAATGCCATGTAACATACTCCTTTAGCTGTTCTGATGTCATTGAAAGTCTGATTATTGTTTGTTTATGTGCAAATTATTCTGGGAGTTTTTCCATTATAAGGTTAGTTTTGAGAAATATGAAGTTATCGACTCCAGAAAATCTTAGTATCAAGACTTACTGTTGGATGAGGGAGACAAAAGTCTTGCATCTTCTTGTTTATCTTCTCGTTTATTGGATTGTCAGTTCATGTTAGTTTTTTGGTAAGCATACTATCTATATGTGTTTCTTTGAGCCGAGAGTCTTTCGGAAACAACCTTTCTACCTAACAAAGTAGAAATAAGGTCTGCATACACTCTACCCTCCCCAGACCCCACTTGTGTGACTATACTGGGTATGTTGTTGTTGTTGTTGTACTATCTATCTGTGTTAGTTTCTGCCGATGTCCCTTTCTGGGGGCAGGGGGGTCCAGAAGAGAAACAAAATAATGCTGGGCTCTGAGACAAATTCTTTAAAGATGTTTCGACTTGTCCAAACCTGTCCCTGTTTCATATGGTGTCCTCCGCAAGCAACTCTTGACGCGTTCTTACATTTTATGTGCAGGTCTGAGTTCATTTTTATTAATCCCAACTCGAAAGGGCAATGCGGTTGTGGTGAGTCTTTCATGACAACAGCCAGTAAAGGTGCTGAAAAGTGAGATGATTTTAATGAGACATGATGTTTATAATGTACTCATTAGGTAGGCGAACAATGAAATAAAGATTTATTCCCAGAATTAAAATGTTATATCTTATACATGTCTTTGTATTGTGTTTATTAGATGTAAAAAATTGCCAGTCTTGGCATTTGTATAATCTACTGATACTGATATTACAGAAATGGAAAGAGTAAAAT</genome_strand>
        <mrna_strand>TGCACGTGATTGGTACCAAGATGGATTTTGTAGATGATAAATTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGAGTTCATTTTTATTAATCCCAACTCGAAAGGGCAATGCGGTTGTGGTGAGTCTTTCATGACAACAGCCAGTAAAGGTGCTGAAAAGTGAGATGATTTTAATGAGACATGATGTTTATAATGTACTCATTAGGTAGGCGAACAATGAAATAAAGATTTATTCCCAGAATTAAAATGTTATATCTTATACATGTCTTTGAATTGTGTTTATTAGATGTAAAAAATTGCCAGTCTTGGCATTTGTATAATCTACTCCCGCTGATATTCCAGAAATGGAAAGAGTAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E356285" ref_strand="+" ref_description="SGN-E356285 [cTOS-20-C11]">
      <seq>ttcattgctatgtacatttatgagccaataattcttggtagagaaacaagtattgacatatggattatggagaaaaatggctattggactaaaaatatgagaattggcccttttttaaatatcaaaagatcaattggatatggaaaaaatggggaaatttttcttgaagttgttacatatcaattggacatatttgatccttttttaaagaacaataaggttcttagccaacaaaaaaatggctactctttgcaagcttttgcttacaatgaaagcttaatttcattgaaaaatatttcattcttggaatttagttgggtaatgatataaatgaaaatgatggctataatttaaattctaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="17250" stop="18209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17550" g_stop="17909" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="361" polyA_stop="371"/>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E356285" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>360</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17550" e_stop="17909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTGCTATGTACATTTATGAGCCAATAATTCTTGGTAGAGAAACAAGTATTGACATATGGATTATGGAGAAAAATGGCTATTGGACTAAAAATATGAGAATTGGCCCTTTTTTAAATATCAAAAGATCAATTGGATATGGAAAAAATGGGGAAATTTTTCTTGAAGTTGTTACATATCAATTGGACATATTTGATCCTTTTTTAAAGAACAATAAGGTTCTTAGCCAACAAAAAAATGGCTACTCTTTGCAAGCTTTTGCTTACAATGAAAGCTTAGTTTCATTGAAAAATATTTCATTCTTGTAATTTAGTTGGTTAATGATATAAATGAAAATGATGGCTATAATTTAAATTCTA</genome_strand>
        <mrna_strand>TTCATTGCTATGTACATTTATGAGCCAATAATTCTTGGTAGAGAAACAAGTATTGACATATGGATTATGGAGAAAAATGGCTATTGGACTAAAAATATGAGAATTGGCCCTTTTTTAAATATCAAAAGATCAATTGGATATGGAAAAAATGGGGAAATTTTTCTTGAAGTTGTTACATATCAATTGGACATATTTGATCCTTTTTTAAAGAACAATAAGGTTCTTAGCCAACAAAAAAATGGCTACTCTTTGCAAGCTTTTGCTTACAATGAAAGCTTAATTTCATTGAAAAATATTTCATTCTTGGAATTTAGTTGGGTAATGATATAAATGAAAATGATGGCTATAATTTAAATTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E354793" ref_strand="+" ref_description="SGN-E354793 [cTOS-19-C10]">
      <seq>ttcattgctatgtacatttatgagccaataattcttggtagagaaacaagtattgacatatggattatggagaaaaatggctattggactaaaaatatgagaattggcccttttttaaatatcaaaagatcaattggatatggaaaaaatggggaaatttttcttgaagttgttacatatcaattggacatatttgatccttttttaaagaacaataaggttcttagccaacaaaaaaatggctactctttgcaagcttttgcttacaatgaaagcttagtttcattgaaaaatatttcattcttgtaatttagttggttaatgatataaatgaaaatgatggctataatttaaattctaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="17250" stop="18209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17550" g_stop="17909" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="361" polyA_stop="371"/>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E354793" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>360</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354793" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17550" e_stop="17909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTGCTATGTACATTTATGAGCCAATAATTCTTGGTAGAGAAACAAGTATTGACATATGGATTATGGAGAAAAATGGCTATTGGACTAAAAATATGAGAATTGGCCCTTTTTTAAATATCAAAAGATCAATTGGATATGGAAAAAATGGGGAAATTTTTCTTGAAGTTGTTACATATCAATTGGACATATTTGATCCTTTTTTAAAGAACAATAAGGTTCTTAGCCAACAAAAAAATGGCTACTCTTTGCAAGCTTTTGCTTACAATGAAAGCTTAGTTTCATTGAAAAATATTTCATTCTTGTAATTTAGTTGGTTAATGATATAAATGAAAATGATGGCTATAATTTAAATTCTA</genome_strand>
        <mrna_strand>TTCATTGCTATGTACATTTATGAGCCAATAATTCTTGGTAGAGAAACAAGTATTGACATATGGATTATGGAGAAAAATGGCTATTGGACTAAAAATATGAGAATTGGCCCTTTTTTAAATATCAAAAGATCAATTGGATATGGAAAAAATGGGGAAATTTTTCTTGAAGTTGTTACATATCAATTGGACATATTTGATCCTTTTTTAAAGAACAATAAGGTTCTTAGCCAACAAAAAAATGGCTACTCTTTGCAAGCTTTTGCTTACAATGAAAGCTTAGTTTCATTGAAAAATATTTCATTCTTGTAATTTAGTTGGTTAATGATATAAATGAAAATGATGGCTATAATTTAAATTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E542597" ref_strand="+" ref_description="SGN-E542597 [TUS-63-P19]">
      <seq>gcaatgagcaactttgcacctagtcatgttctcacgcttgcttctcgttgtgtagaccgtgctttcaagggaagcaattgtttgactaggcttaatgcctttgtccgataagtttgtatcgaaaacagataacttaattggtgtttcgtttcctaaagttttggattttcttgtgctgtttgagctcactgtttctattactcaactctcctttcaggcacaggtaagacaacaaggagaatatgaatccctccaccgcgacttaatgattggattcggaacatgggaattcgatccaatggatcttgagaacccgttccctaacaatgaaggttccgttcacttatggcaaggcgatgaggataggctctcgcccgtcacactacaaaggtacatttcacagcaattaccatggatccaatatcatgaaattccaggtgctggtcatttgattccaatgattgatggaattggagagaaaatcttcaagactcttttaactgcgtaaactcaccatttttatagctacgcgcaaggtttcatcttgcacgtcgtgatgtgttttaagttgtctacatatctctggtttttgtcgatcgttaagtttcatattttgatgtcaaagagttttgactttgagagaaatattttgtattacaaattcttttgtttgtaattaaggatagtgatatttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="26677" stop="25390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26388" g_stop="25685" g_length="704"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="704" r_length="704" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E542597" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26388" e_stop="25685"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAGTTGCTCATTGCATCTAGTCATGTTCTCACGCTTGCTTCTCGTTGTGTAGACCGTGCTTTCAAGGGAAGCAATTGTTTGACTAGGCTTAATGCCTTTGTCCGATAAGTTTGTATCGAAAACAGATAACTTAATTGGTGTTTCGTTTCCTAAAGTTTTGGATTTTCTTGTGCTGTTTGAGCTCACTGTTTCTATTACTCAACTCTCCTTTCAGGCACAGGTAAGACAACAAGGAGAATATGAATCCCTCCACCGCGACTTAATGATTGGATTCGGAACATGGGAATTCGATCCAATGGATCTTGAGAACCCGTTCCCTAACAATGAAGGTTCCGTTCACTTATGGCAAGGCGATGAGGATAGGCTCTCGCCCGTCACACTACAAAGGTACATTTCACAGCAATTACCATGGATCCAATATCATGAAATTCCAGGTGCTGGTCATTTGATTCCAATGATTGATGGAATTGGAGAGAAAATCTTCAAGACTCTTTTAACTGCGTAAACTCACCATTTTTATAGCTACGCGCAAGGTTTCATCTTGCACGTCGTGATGTGTTTTAAGTTGTCTACATATCTCTGGTTTTTGTCGATCGTTAAGTTTCATATTTTGATGTCAAAGAGTTTTGACTTTGAGAGAAATATTTTGTATTACAAATTCTTTTGTTTGTAATTAAGGATAGTGATATTTAAACATTTTT</genome_strand>
        <mrna_strand>GCAATGAGCAACTTTGCACCTAGTCATGTTCTCACGCTTGCTTCTCGTTGTGTAGACCGTGCTTTCAAGGGAAGCAATTGTTTGACTAGGCTTAATGCCTTTGTCCGATAAGTTTGTATCGAAAACAGATAACTTAATTGGTGTTTCGTTTCCTAAAGTTTTGGATTTTCTTGTGCTGTTTGAGCTCACTGTTTCTATTACTCAACTCTCCTTTCAGGCACAGGTAAGACAACAAGGAGAATATGAATCCCTCCACCGCGACTTAATGATTGGATTCGGAACATGGGAATTCGATCCAATGGATCTTGAGAACCCGTTCCCTAACAATGAAGGTTCCGTTCACTTATGGCAAGGCGATGAGGATAGGCTCTCGCCCGTCACACTACAAAGGTACATTTCACAGCAATTACCATGGATCCAATATCATGAAATTCCAGGTGCTGGTCATTTGATTCCAATGATTGATGGAATTGGAGAGAAAATCTTCAAGACTCTTTTAACTGCGTAAACTCACCATTTTTATAGCTACGCGCAAGGTTTCATCTTGCACGTCGTGATGTGTTTTAAGTTGTCTACATATCTCTGGTTTTTGTCGATCGTTAAGTTTCATATTTTGATGTCAAAGAGTTTTGACTTTGAGAGAAATATTTTGTATTACAAATTCTTTTGTTTGTAATTAAGGATAGTGATATTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E301185" ref_strand="+" ref_description="SGN-E301185 [cLEW-22-L7]">
      <seq>caatgagcaactttgcacctagtcatgttctcacgcttgcttctcgttgtgtagaccgtgctttcaagggaagcaattgtttgactaggcttaatgcctttgtccgataagtttgtatcgaaaacagataacttaattggtgtttcgtttcctaaagttttggattttcttgtgctgtttgagctcactgtttctattactcaactctcctttcaggcacaggtaagacaacaaggagaatatgaatccctccaccgcgacttaatgattggattcggaacatgggaattcgatccaatggatcttgagaacccgttccctaacaatgaaggttccgttcacttatggcaaggcgatgaggataggctctcgcccgtcacactacaaaggtacatttcacagcaattaccatggatccaatatcatgaaattccaggtgctggtcatttgattccaatgattgatggaattggagagaaaatcttcaagactcttttaactgcgtaaactcaccatttttatagctacgcgcaaggtttcatcttgcacgtcgtgatgtgttttaagttgtctacatatctctggtttttgtcgatcgttaagtttcatattttgatgtcaaagagttttgactttgagagaaatattttgtattacaaattcttttgtttgtaattaaagatagtgatatttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="26677" stop="25390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26387" g_stop="25685" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="703" r_length="703" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E301185" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26387" e_stop="25685"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGTTGCTCATTGCATCTAGTCATGTTCTCACGCTTGCTTCTCGTTGTGTAGACCGTGCTTTCAAGGGAAGCAATTGTTTGACTAGGCTTAATGCCTTTGTCCGATAAGTTTGTATCGAAAACAGATAACTTAATTGGTGTTTCGTTTCCTAAAGTTTTGGATTTTCTTGTGCTGTTTGAGCTCACTGTTTCTATTACTCAACTCTCCTTTCAGGCACAGGTAAGACAACAAGGAGAATATGAATCCCTCCACCGCGACTTAATGATTGGATTCGGAACATGGGAATTCGATCCAATGGATCTTGAGAACCCGTTCCCTAACAATGAAGGTTCCGTTCACTTATGGCAAGGCGATGAGGATAGGCTCTCGCCCGTCACACTACAAAGGTACATTTCACAGCAATTACCATGGATCCAATATCATGAAATTCCAGGTGCTGGTCATTTGATTCCAATGATTGATGGAATTGGAGAGAAAATCTTCAAGACTCTTTTAACTGCGTAAACTCACCATTTTTATAGCTACGCGCAAGGTTTCATCTTGCACGTCGTGATGTGTTTTAAGTTGTCTACATATCTCTGGTTTTTGTCGATCGTTAAGTTTCATATTTTGATGTCAAAGAGTTTTGACTTTGAGAGAAATATTTTGTATTACAAATTCTTTTGTTTGTAATTAAGGATAGTGATATTTAAACATTTTT</genome_strand>
        <mrna_strand>CAATGAGCAACTTTGCACCTAGTCATGTTCTCACGCTTGCTTCTCGTTGTGTAGACCGTGCTTTCAAGGGAAGCAATTGTTTGACTAGGCTTAATGCCTTTGTCCGATAAGTTTGTATCGAAAACAGATAACTTAATTGGTGTTTCGTTTCCTAAAGTTTTGGATTTTCTTGTGCTGTTTGAGCTCACTGTTTCTATTACTCAACTCTCCTTTCAGGCACAGGTAAGACAACAAGGAGAATATGAATCCCTCCACCGCGACTTAATGATTGGATTCGGAACATGGGAATTCGATCCAATGGATCTTGAGAACCCGTTCCCTAACAATGAAGGTTCCGTTCACTTATGGCAAGGCGATGAGGATAGGCTCTCGCCCGTCACACTACAAAGGTACATTTCACAGCAATTACCATGGATCCAATATCATGAAATTCCAGGTGCTGGTCATTTGATTCCAATGATTGATGGAATTGGAGAGAAAATCTTCAAGACTCTTTTAACTGCGTAAACTCACCATTTTTATAGCTACGCGCAAGGTTTCATCTTGCACGTCGTGATGTGTTTTAAGTTGTCTACATATCTCTGGTTTTTGTCGATCGTTAAGTTTCATATTTTGATGTCAAAGAGTTTTGACTTTGAGAGAAATATTTTGTATTACAAATTCTTTTGTTTGTAATTAAAGATAGTGATATTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E542594" ref_strand="+" ref_description="SGN-E542594 [TUS-63-P19](-)">
      <seq>gcaatgagcaactttgcacctagtcatgttctcacgcttgcttctcgttgtgtagaccgtgctttcaagggaagcaattgtttgactaggcttaatgcctttgtccgataagtttgtatcgaaaacagataacttaattggtgtttcgtttcctaaagttttggattttcttgtgctgtttgagctcactgtttctattactcaactctcctttcaggcacaggtaagacaacaaggagaatatgaatccctccaccgcgacttaatgattggattcggaacatgggaattcgatccaatggatcttgagaacccgttccctaacaatgaaggttccgttcacttatggcaaggcgatgaggataggctctcgcccgtcacactacaaaggtacatttcacagcaattaccatggatccaatatcatgaaattccaggtgctggtcatttgattccaatgattgatggaattggagagaaaatcttcaagactcttttaactgcgtaaactcaccatttttatagctacgcgcaaggtttcatcttgcacgtcgtgatgtgttttaagttgtctacatatctctggtttttgtcgatcgttaagtttcatattttgatgtcaaagagttttgactttgagagaaatattttgtattacaaattcttttgtttgtaattaaggatagtgatattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="26677" stop="25390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26388" g_stop="25686" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="703" r_length="703" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E542594" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542594" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26388" e_stop="25686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAGTTGCTCATTGCATCTAGTCATGTTCTCACGCTTGCTTCTCGTTGTGTAGACCGTGCTTTCAAGGGAAGCAATTGTTTGACTAGGCTTAATGCCTTTGTCCGATAAGTTTGTATCGAAAACAGATAACTTAATTGGTGTTTCGTTTCCTAAAGTTTTGGATTTTCTTGTGCTGTTTGAGCTCACTGTTTCTATTACTCAACTCTCCTTTCAGGCACAGGTAAGACAACAAGGAGAATATGAATCCCTCCACCGCGACTTAATGATTGGATTCGGAACATGGGAATTCGATCCAATGGATCTTGAGAACCCGTTCCCTAACAATGAAGGTTCCGTTCACTTATGGCAAGGCGATGAGGATAGGCTCTCGCCCGTCACACTACAAAGGTACATTTCACAGCAATTACCATGGATCCAATATCATGAAATTCCAGGTGCTGGTCATTTGATTCCAATGATTGATGGAATTGGAGAGAAAATCTTCAAGACTCTTTTAACTGCGTAAACTCACCATTTTTATAGCTACGCGCAAGGTTTCATCTTGCACGTCGTGATGTGTTTTAAGTTGTCTACATATCTCTGGTTTTTGTCGATCGTTAAGTTTCATATTTTGATGTCAAAGAGTTTTGACTTTGAGAGAAATATTTTGTATTACAAATTCTTTTGTTTGTAATTAAGGATAGTGATATTTAAACATTTT</genome_strand>
        <mrna_strand>GCAATGAGCAACTTTGCACCTAGTCATGTTCTCACGCTTGCTTCTCGTTGTGTAGACCGTGCTTTCAAGGGAAGCAATTGTTTGACTAGGCTTAATGCCTTTGTCCGATAAGTTTGTATCGAAAACAGATAACTTAATTGGTGTTTCGTTTCCTAAAGTTTTGGATTTTCTTGTGCTGTTTGAGCTCACTGTTTCTATTACTCAACTCTCCTTTCAGGCACAGGTAAGACAACAAGGAGAATATGAATCCCTCCACCGCGACTTAATGATTGGATTCGGAACATGGGAATTCGATCCAATGGATCTTGAGAACCCGTTCCCTAACAATGAAGGTTCCGTTCACTTATGGCAAGGCGATGAGGATAGGCTCTCGCCCGTCACACTACAAAGGTACATTTCACAGCAATTACCATGGATCCAATATCATGAAATTCCAGGTGCTGGTCATTTGATTCCAATGATTGATGGAATTGGAGAGAAAATCTTCAAGACTCTTTTAACTGCGTAAACTCACCATTTTTATAGCTACGCGCAAGGTTTCATCTTGCACGTCGTGATGTGTTTTAAGTTGTCTACATATCTCTGGTTTTTGTCGATCGTTAAGTTTCATATTTTGATGTCAAAGAGTTTTGACTTTGAGAGAAATATTTTGTATTACAAATTCTTTTGTTTGTAATTAAGGATAGTGATATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E210660" ref_strand="+" ref_description="SGN-E210660 [cLEC-68-F19]">
      <seq>tcactgcacctagaatcaaacttagtgatggaagacacttggcttacaaggagactggtgtacttagagataatgcaaaatataagattgtatatatccatgggtacgatggttgtaggcatgatgttccaattaacatcctctctcaagatgtcatcgaaagtttaggagtgtacattgtttcctttgacagacctggttatggagaaagtgatcctaatccaaaacgaacagtcaagagcttagcttttgacatacaggagcttgctgatcaattaggtctaggatcgaaattctatgttatgggattttcaatggggggacaggctgtttggacctgtctcagatacattcctcacaggttggcaggtgctgctcttattgcaccagttgtcaactattggtggcctaggtttcctgctaatatgtcccaagaagcattcaaccttcgacttcctcaagacaaatggactcttcgtgttgctcattaccttccgtggctcacctattggtggaacactcagaagttctttccttcatgcagtgctgcaggtcgcaaccctgcaattttctcttcgaaggacctagagctagtttccaagcaaagttcgagccaagactatcgtgcacaggtaagacaacaaagagaatatgaatccctccaccgcgacttaatgattggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="29721" stop="25813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29421" g_stop="29273" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29272" i_stop="29192" i_length="81">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29191" g_stop="28980" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="361" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28979" i_stop="28288" i_length="692">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28287" g_stop="28023" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="626" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28022" i_stop="26172" i_length="1851">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26171" g_stop="26113" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="685" r_length="59" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E210660" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29421" e_stop="29273"/>
          <exon e_start="29191" e_stop="28980"/>
          <exon e_start="28287" e_stop="28023"/>
          <exon e_start="26171" e_stop="26113"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAAGTAACGTCACTTGGTTCTCTTGTTCGTATTCTTTTATGGACCAACTATGTATTTTGGACATAATTTTTGTTTTTCTTGCAGGATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAGATACATTCCTCACAGGTAATCTCATTTTTATTACATGTACATTAGTAGAGCGTTATACCTCATATACAATGGCTGAACCAAGTTTTCTTTACTAAAGGCCCTTACAATATAAAAAAGTAAACACACGAAGAAGCCAGTGACATCTATTATTTATACACAAAAGAATAGAGTTAATGGTGAAAGAACATACCTAAATTATCACGTTTTCGCGAGTTTCATACCTCAATTACCACTCAATTATATCAAAACATACCTCGATGTTTTGCCTACATGTGCTTGTTGTTGATTGAGAAGGAATATTTGGCCAACACAACATCGAAGTGTGTCTTAATACTAAGGGAATGACAATTTAGATAGGTAAAGAGAACAATGGGTAGTTGAGGTATGAAACTCGCGAAAAAGTCATTGTTTGGATGTGTTTTTGACCATTAACTCTAAAAAATTAACCTTGACCTTGAAAATACAGTATAACTTTCCGCGAAGGGCCCTAGCTCTGCCATGTTCGTATGGAATTTGTGTAGGTTCAGTAATTTGTGGAAGAAAAGCTTGAAATTTTTTCTGGAAAAGCAGACTCTATAGAGGAATCTCAATTCCTATTTTCAGGAGCACAAACATAAGAATTTTTGTTATATGATTGTTTATTTGTTTTATTAAGTTATTTGAAATGAATATCAAGATTCAAGAATAACGTTCGTTACTTGAAATAGGTTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTATTGGTGGCCTAGGTTTCCTGCTAATATGTCCCAAGAAGCATTCAACCTTCGACTTCCTCAAGACAAATGGACTCTTCGTGTTGCTCATTACCTTCCGTGGCTCACCTATTGGTGGAACACTCAGAAGTTCTTTCCTTCATGCAGTGCTGCAGGTCGCAACCCTGCAATTTTCTCTTCGAAGGACCTAGAGCTAGTTTCCAAGCAAAGTTCGAGCCAAGACTATCGTGTAAGAGCTCTTTCCTTTAATATCAATTTGTTAAATGAAGATGTTAGGAGGATGGTATTACAGCTACATTTATAAATTTGGGTTGGAAATTATTCGAGTTGTGCTTGAGCCTGGCTGCATATTACATGAGCTTGGAAACCACCTCAAACTTCGCTACGGAAAAATATTTACCCATCTCAAGTTTTAGCTTAGTGTAGATATGATAATGTCTAGTTTCTCCTATTTTCTTCAATCCAGAATCAAGTTCTGGAATCAACCGTTAATAGACCAACATAACTTTCTACTATCAACCGTAGAGTCAGGGTGGGTGGGGTGGGTGTAACTGAGGGAGACTGAGAGAGACAAACAAAAGGCTAACAAATTGATGATTGGCATTCTTGTAAGTGTGTTATAAGAGTTCGCCTATGCTTTGGAGTATATCGTGCGGTCTATTGAATCACTTGGAAATGCTAATTTTATATTTTTAGACCTACAATAAGAACCTCCTGTTTGGGATTAGTGCAATCGAAGCTTACAAGAGTAAATATGACAAATTCATGCTCAACAAAATGTAGCAAGTTTGTGCTTATAGAAGCTGAATCAAGATCTGTTCACGCACAAGTTGGCTAATCTACAACCCTTAGGTATGTGAGAAATACATGTTACCAATTTTTTTTTAAAAAGGAATATGTATTTGTATCCGAGTATCAAAAGTCATTGATATGTAAAAATACATTGGGGTCAATCATAGTACTTCCAATGATAAGGATTGATCGGCATTCAACAAATAGACATAGCAAGGGATAATGGTTAAAGTTTCTTTTCTTTTTCTTGATAATGCTGCTCGGATAATATTGTGCACTTCGACTAATCTATGGATGCTTGTTATCTTCTACCAATGCATTATACATGTATTTATTAACCGTCTTAAACTAAAGATATATAAAATTTACAAAAATATCCTTTAATCGTGTAGTCTTAGACAAGCCACGTAGTAAGTTGGAATTAAAAGATTGCAAAAAAAGGTAATAAACCTTTTTTTAAAAAAATGGACTAAAAGGGAAAGTGAAACAAACAAATTGAAACGGAGCGAGTAATGTGTTTCTGGCTAAAGATGTCCGGTGGGGTTCTTGAGAGGACCCACATTTGTTGAGACCTCGAAGTGTTACTATTAAGTTACGAGGCCTTTAACAAAAATGGGGCCTAATAAGCTTGTTGTTTATGGAGAAGAAGAAGCATGGGAGACTAGGCTTCAAAACCTATCAGTGCTAACAAAAAAGAAAATCAAAGCCTTAGTTGTCAGGTTACCACTACTTCGTGTTGAACTTGATAGGAGGTATCCAGTGCCAAATGAAATAGTCAAGGTGCATGCAAGTTCGCCTAAATACCAGTTTTACGGAGAAAACTTTTGTTGTGTATGTTGATGTGGTGTATAGGACAATGGGTCTTAGGATGACTCTTTGCGTACCAAGAGAGTCATGCAGAGGAATGATATTGACACTTCATTCCGAGAGAAACGCCCTTTTGCGTATAACATAGCTTTTAAGCATCAACATTTTGAAGCCTTCATTTGTAGAGGCAGATATCAGTGAGCTTATGCCGCTTTTGTAAATAGTAAGATTAAACTCCACAGGCTAAGAAATTTTGATCGATGTGCAAAGTTGCTCATTGCATCTAGTCATGTTCTCACGCTTGCTTCTCGTTGTGTAGACCGTGCTTTCAAGGGAAGCAATTGTTTGACTAGGCTTAATGCCTTTGTCCGATAAGTTTGTATCGAAAACAGATAACTTAATTGGTGTTTCGTTTCCTAAAGTTTTGGATTTTCTTGTGCTGTTTGAGCTCACTGTTTCTATTACTCAACTCTCCTTTCAGGCACAGGTAAGACAACAAGGAGAATATGAATCCCTCCACCGCGACTTAATGATTGGATT</genome_strand>
        <mrna_strand>TCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAA.................................................................................GATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAGATACATTCCTCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTATTGGTGGCCTAGGTTTCCTGCTAATATGTCCCAAGAAGCATTCAACCTTCGACTTCCTCAAGACAAATGGACTCTTCGTGTTGCTCATTACCTTCCGTGGCTCACCTATTGGTGGAACACTCAGAAGTTCTTTCCTTCATGCAGTGCTGCAGGTCGCAACCCTGCAATTTTCTCTTCGAAGGACCTAGAGCTAGTTTCCAAGCAAAGTTCGAGCCAAGACTATCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGGTAAGACAACAAAGAGAATATGAATCCCTCCACCGCGACTTAATGATTGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E258427" ref_strand="+" ref_description="SGN-E258427 [cLEG-47-M22]">
      <seq>gcgaaaattcttctggttgttttgattgggttattagcgtggggttatcaagcaacacgaccacctccccctaagacctgtggatccccagatggccctcccgtcactgcacctagaatcaaacttagtgatggaagacacttggcttacaaggagactggtgtacttagagataatgcaaaatataagattgtatatatccatgggtacgatggttgtaggcatgatgttccaattaacatcctctctcaagatgtcatcgaaagtttaggagtgtacattgtttcctttgacagacctggttatggagaaagtgatcctaatccaaaacgaacagtcaagagcttagcttttgacatacaggagcttgctgatcaattaggtctaggatcgaaattctatgttatgggattttcaatggggggacaggctgtttggacctgtctcagatacattcctcacaggttggcaggtgctgctcttattgcaccagttgtcaactattggtggcctaggtttcctgctaatatgtcccaagaagcattcaaccttcgacttcctcaagacaaatggactcttcgtgttgctcattaccttccgtggctcacctattggtggaacactcagaagttctttccttcatgcagtgctgcaggtcgcaaccctgcaattttctcttcgaaggacctagagctagtttccnagcaaagttcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="29824" stop="27738"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29524" g_stop="29273" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29272" i_stop="29192" i_length="81">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29191" g_stop="28980" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="464" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28979" i_stop="28288" i_length="692">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28287" g_stop="28038" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="714" r_length="250" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E258427" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29524" e_stop="29273"/>
          <exon e_start="29191" e_stop="28980"/>
          <exon e_start="28287" e_stop="28038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAAAATTCTTCTGGTTGTTTTGATTGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAAGTAACGTCACTTGGTTCTCTTGTTCGTATTCTTTTATGGACCAACTATGTATTTTGGACATAATTTTTGTTTTTCTTGCAGGATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAGATACATTCCTCACAGGTAATCTCATTTTTATTACATGTACATTAGTAGAGCGTTATACCTCATATACAATGGCTGAACCAAGTTTTCTTTACTAAAGGCCCTTACAATATAAAAAAGTAAACACACGAAGAAGCCAGTGACATCTATTATTTATACACAAAAGAATAGAGTTAATGGTGAAAGAACATACCTAAATTATCACGTTTTCGCGAGTTTCATACCTCAATTACCACTCAATTATATCAAAACATACCTCGATGTTTTGCCTACATGTGCTTGTTGTTGATTGAGAAGGAATATTTGGCCAACACAACATCGAAGTGTGTCTTAATACTAAGGGAATGACAATTTAGATAGGTAAAGAGAACAATGGGTAGTTGAGGTATGAAACTCGCGAAAAAGTCATTGTTTGGATGTGTTTTTGACCATTAACTCTAAAAAATTAACCTTGACCTTGAAAATACAGTATAACTTTCCGCGAAGGGCCCTAGCTCTGCCATGTTCGTATGGAATTTGTGTAGGTTCAGTAATTTGTGGAAGAAAAGCTTGAAATTTTTTCTGGAAAAGCAGACTCTATAGAGGAATCTCAATTCCTATTTTCAGGAGCACAAACATAAGAATTTTTGTTATATGATTGTTTATTTGTTTTATTAAGTTATTTGAAATGAATATCAAGATTCAAGAATAACGTTCGTTACTTGAAATAGGTTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTATTGGTGGCCTAGGTTTCCTGCTAATATGTCCCAAGAAGCATTCAACCTTCGACTTCCTCAAGACAAATGGACTCTTCGTGTTGCTCATTACCTTCCGTGGCTCACCTATTGGTGGAACACTCAGAAGTTCTTTCCTTCATGCAGTGCTGCAGGTCGCAACCCTGCAATTTTCTCTTCGAAGGACCTAGAGCTAGTTTCCAAGCAAAGTTCG</genome_strand>
        <mrna_strand>GCGAAAATTCTTCTGGTTGTTTTGATTGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAA.................................................................................GATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAGATACATTCCTCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTATTGGTGGCCTAGGTTTCCTGCTAATATGTCCCAAGAAGCATTCAACCTTCGACTTCCTCAAGACAAATGGACTCTTCGTGTTGCTCATTACCTTCCGTGGCTCACCTATTGGTGGAACACTCAGAAGTTCTTTCCTTCATGCAGTGCTGCAGGTCGCAACCCTGCAATTTTCTCTTCGAAGGACCTAGAGCTAGTTTCCNAGCAAAGTTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E214001" ref_strand="+" ref_description="SGN-E214001 [cLEC-80-F22]">
      <seq>tgttttgattgggttattagcgtggggttatcaagcaacacgaccacctccccctaagacctgtggatccccagatggccctcccgtcactgcacctataatcaaacttagtgatggaagacacttggcttacaaggagactggtgtacttagagataatgcaaaatataagattgtatatatccatgggtacaatgggtgtaagcatgatgttccaattaacatcctctctcaagatgtcatcgaaagtttaggagtgtacattgtttcctttgacagacctggttatggagaaagtgatcctaatccaaaacgaacagtcaagagcttagcttttgacatacaggagcttgctgatcaattatgtctaggatcgaaattctatgttatgggattttcaatggggggacaggctgtttggacctgtctcagatacattcctcacaggctggcaggtgctgctcttattgcaccagttgtcaactattggtggcctaggtttcctgctaatatgtcccaagaagcattcgaccttcgacttcctcaagacaaatggactcttcgtgtagctcattaccttccgcggctcacctattggtggaacactcagaagttctttccttcatgcagtgctgcaggtcgcaaccctgcaattttctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="29807" stop="27773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29507" g_stop="29273" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29272" i_stop="29192" i_length="81">
            <donor d_prob="0.973" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29191" g_stop="28980" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="447" r_length="212" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28979" i_stop="28288" i_length="692">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28287" g_stop="28073" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="662" r_length="215" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E214001" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214001" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29507" e_stop="29273"/>
          <exon e_start="29191" e_stop="28980"/>
          <exon e_start="28287" e_stop="28073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTTGATTGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAAGTAACGTCACTTGGTTCTCTTGTTCGTATTCTTTTATGGACCAACTATGTATTTTGGACATAATTTTTGTTTTTCTTGCAGGATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAGATACATTCCTCACAGGTAATCTCATTTTTATTACATGTACATTAGTAGAGCGTTATACCTCATATACAATGGCTGAACCAAGTTTTCTTTACTAAAGGCCCTTACAATATAAAAAAGTAAACACACGAAGAAGCCAGTGACATCTATTATTTATACACAAAAGAATAGAGTTAATGGTGAAAGAACATACCTAAATTATCACGTTTTCGCGAGTTTCATACCTCAATTACCACTCAATTATATCAAAACATACCTCGATGTTTTGCCTACATGTGCTTGTTGTTGATTGAGAAGGAATATTTGGCCAACACAACATCGAAGTGTGTCTTAATACTAAGGGAATGACAATTTAGATAGGTAAAGAGAACAATGGGTAGTTGAGGTATGAAACTCGCGAAAAAGTCATTGTTTGGATGTGTTTTTGACCATTAACTCTAAAAAATTAACCTTGACCTTGAAAATACAGTATAACTTTCCGCGAAGGGCCCTAGCTCTGCCATGTTCGTATGGAATTTGTGTAGGTTCAGTAATTTGTGGAAGAAAAGCTTGAAATTTTTTCTGGAAAAGCAGACTCTATAGAGGAATCTCAATTCCTATTTTCAGGAGCACAAACATAAGAATTTTTGTTATATGATTGTTTATTTGTTTTATTAAGTTATTTGAAATGAATATCAAGATTCAAGAATAACGTTCGTTACTTGAAATAGGTTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTATTGGTGGCCTAGGTTTCCTGCTAATATGTCCCAAGAAGCATTCAACCTTCGACTTCCTCAAGACAAATGGACTCTTCGTGTTGCTCATTACCTTCCGTGGCTCACCTATTGGTGGAACACTCAGAAGTTCTTTCCTTCATGCAGTGCTGCAGGTCGCAACCCTGCAATTTTCTCTT</genome_strand>
        <mrna_strand>TGTTTTGATTGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTATAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACAATGGGTGTAAGCATGATGTTCCAATTAACATCCTCTCTCAA.................................................................................GATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTATGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAGATACATTCCTCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTATTGGTGGCCTAGGTTTCCTGCTAATATGTCCCAAGAAGCATTCGACCTTCGACTTCCTCAAGACAAATGGACTCTTCGTGTAGCTCATTACCTTCCGCGGCTCACCTATTGGTGGAACACTCAGAAGTTCTTTCCTTCATGCAGTGCTGCAGGTCGCAACCCTGCAATTTTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E205749" ref_strand="+" ref_description="SGN-E205749 [cLEC-21-D22]">
      <seq>ccgtcactgcacctagaatcaaacttagtgatggaagacacttggcttacaaggagactggtgtacttagagataatgcaaaatataagattgtatatatccatgggtacgatggttgtaggcatgatgttccaattaacatcctctctcaagatgtcatcgaaagtttaggagtgtacattgtttcctttgacagacctggttatggagaaagtgatcctaatccaaaacgaacagtcaagagcttagcttttgacatacaggagcttgctgatcaattaggtctaggatcgaaattctatgttattgggattttcaatggggggacaggctgtttggacctgtctcaaatacattcctcacaggttggcaggtgctgctcttattgcaccagttgtcaactattggtggcctaggtttcctgctaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="29724" stop="27922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29424" g_stop="29273" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29272" i_stop="29192" i_length="81">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29191" g_stop="28980" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="365" r_length="213" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28979" i_stop="28288" i_length="692">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28287" g_stop="28222" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="431" r_length="66" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E205749" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205749" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29424" e_stop="29273"/>
          <exon e_start="29191" e_stop="28980"/>
          <exon e_start="28287" e_stop="28222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAAGTAACGTCACTTGGTTCTCTTGTTCGTATTCTTTTATGGACCAACTATGTATTTTGGACATAATTTTTGTTTTTCTTGCAGGATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTAT-GGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAGATACATTCCTCACAGGTAATCTCATTTTTATTACATGTACATTAGTAGAGCGTTATACCTCATATACAATGGCTGAACCAAGTTTTCTTTACTAAAGGCCCTTACAATATAAAAAAGTAAACACACGAAGAAGCCAGTGACATCTATTATTTATACACAAAAGAATAGAGTTAATGGTGAAAGAACATACCTAAATTATCACGTTTTCGCGAGTTTCATACCTCAATTACCACTCAATTATATCAAAACATACCTCGATGTTTTGCCTACATGTGCTTGTTGTTGATTGAGAAGGAATATTTGGCCAACACAACATCGAAGTGTGTCTTAATACTAAGGGAATGACAATTTAGATAGGTAAAGAGAACAATGGGTAGTTGAGGTATGAAACTCGCGAAAAAGTCATTGTTTGGATGTGTTTTTGACCATTAACTCTAAAAAATTAACCTTGACCTTGAAAATACAGTATAACTTTCCGCGAAGGGCCCTAGCTCTGCCATGTTCGTATGGAATTTGTGTAGGTTCAGTAATTTGTGGAAGAAAAGCTTGAAATTTTTTCTGGAAAAGCAGACTCTATAGAGGAATCTCAATTCCTATTTTCAGGAGCACAAACATAAGAATTTTTGTTATATGATTGTTTATTTGTTTTATTAAGTTATTTGAAATGAATATCAAGATTCAAGAATAACGTTCGTTACTTGAAATAGGTTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTATTGGTGGCCTAGGTTTCCTGCTAATAT</genome_strand>
        <mrna_strand>CCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAA.................................................................................GATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATTGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAAATACATTCCTCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTATTGGTGGCCTAGGTTTCCTGCTAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E254771" ref_strand="+" ref_description="SGN-E254771 [cLEG-33-M7]">
      <seq>tgggttattagcgtggggttatcaagcaacacgaccacctccccctaagacctgtggatccccagatggccctcccgtcactgcacctagaatcaaacttagtgatggaagacacttggcttacaaggagactggtgtacttagagataatgcaaaatataagattgtatatatccatgggtacgatggttgtaggcatgatgttccaattaacatcctctctcaagatgtcatcgaaagtttaagagtgtacattgtttcctttgacagacctggttatggagaaagtgatcctaatccaaaacgaacagtcaagagcttagcttttgacatacaggagcttgctgatcaattaggtctaagatcgaaattctatgttatgggattttcaatggggggacaggctgtttggacctgtctcagatacattcctcacaggttggcaggtgctgctcttattgcaccagttgtcaacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="29798" stop="27949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29498" g_stop="29273" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29272" i_stop="29192" i_length="81">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29191" g_stop="28980" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="438" r_length="212" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28979" i_stop="28288" i_length="692">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28287" g_stop="28249" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="477" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E254771" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254771" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29498" e_stop="29273"/>
          <exon e_start="29191" e_stop="28980"/>
          <exon e_start="28287" e_stop="28249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAAGTAACGTCACTTGGTTCTCTTGTTCGTATTCTTTTATGGACCAACTATGTATTTTGGACATAATTTTTGTTTTTCTTGCAGGATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAGATACATTCCTCACAGGTAATCTCATTTTTATTACATGTACATTAGTAGAGCGTTATACCTCATATACAATGGCTGAACCAAGTTTTCTTTACTAAAGGCCCTTACAATATAAAAAAGTAAACACACGAAGAAGCCAGTGACATCTATTATTTATACACAAAAGAATAGAGTTAATGGTGAAAGAACATACCTAAATTATCACGTTTTCGCGAGTTTCATACCTCAATTACCACTCAATTATATCAAAACATACCTCGATGTTTTGCCTACATGTGCTTGTTGTTGATTGAGAAGGAATATTTGGCCAACACAACATCGAAGTGTGTCTTAATACTAAGGGAATGACAATTTAGATAGGTAAAGAGAACAATGGGTAGTTGAGGTATGAAACTCGCGAAAAAGTCATTGTTTGGATGTGTTTTTGACCATTAACTCTAAAAAATTAACCTTGACCTTGAAAATACAGTATAACTTTCCGCGAAGGGCCCTAGCTCTGCCATGTTCGTATGGAATTTGTGTAGGTTCAGTAATTTGTGGAAGAAAAGCTTGAAATTTTTTCTGGAAAAGCAGACTCTATAGAGGAATCTCAATTCCTATTTTCAGGAGCACAAACATAAGAATTTTTGTTATATGATTGTTTATTTGTTTTATTAAGTTATTTGAAATGAATATCAAGATTCAAGAATAACGTTCGTTACTTGAAATAGGTTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTA</genome_strand>
        <mrna_strand>TGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAA.................................................................................GATGTCATCGAAAGTTTAAGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAAGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAGATACATTCCTCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E265378" ref_strand="+" ref_description="SGN-E265378 [cLEI-9-G9]">
      <seq>gcgaaaattcttctggttgttttgattgggttatgggcgtggggttatcaagcgacactaccacctccccctaagacctgtggatccccagatggccctcccgtcactggacctagaatcaaacttagtgatggaagacacttggcttacaaggagactggtgtacttagagataatgcaaaatataagattgtatatatccatgggtacgatggttgtaggcatgatgttccaattaacatcctctctcaagatgtcatcgaaagtttatgagtgtacattgtttcctttgacagacctggttatggagaaagtgatcctaatccaaaacgaacagtcaagagcttagcttttgacatacaaggacttgctgatcaattaggtctatgatcgaaattctatgtcttgggattttcaatggggggacaggctggttggacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="29824" stop="28701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29524" g_stop="29273" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29272" i_stop="29192" i_length="81">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29191" g_stop="29001" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="443" r_length="191" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E265378" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265378" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29524" e_stop="29273"/>
          <exon e_start="29191" e_stop="29001"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAAAATTCTTCTGGTTGTTTTGATTGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAAGTAACGTCACTTGGTTCTCTTGTTCGTATTCTTTTATGGACCAACTATGTATTTTGGACATAATTTTTGTTTTTCTTGCAGGATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTG</genome_strand>
        <mrna_strand>GCGAAAATTCTTCTGGTTGTTTTGATTGGGTTATGGGCGTGGGGTTATCAAGCGACACTACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGGACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAA.................................................................................GATGTCATCGAAAGTTTATGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAAGGACTTGCTGATCAATTAGGTCTATGATCGAAATTCTATGTCTTGGGATTTTCAATGGGGGGACAGGCTGGTTGGACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E323317" ref_strand="+" ref_description="SGN-E323317 [cTOB-28-N24]">
      <seq>aaaagatttcgaacaattattaaatcagtgagatgagactcagatctcttcaaccttcatttttgtataatttttgtaaatctacagtgtgaatacaaaatttgtaatttcaaaatcaagaacttgattcagcaaaaaaaaaaaaaaaatggcaaccaagaagatttcagcagcttcagctagggctcatactcgtaaagctaagcaaaaaagttctattccttttccttctggggcatttgcgaaaattcttctggttgttttgattgggttattagcgtggggttatcaagcaacacgaccacctccccctaagacctgtggatccccagatggccctcccgtcactgcacctaaaatcaaacttagtgatggaagacacttggcttacaaggagactggtgtacttagagataatgcaaaatataagattgtatatatccatgggtacgatggttgtaggcatgatgttccaattaacatcctctctcaagatgtcatcgaaagtttaggagtgtacattgtttcctttgacagacctggttatggagaaagtgatcctaatccaaaacgaacagtcaagagcttagcttttgacatacaggagcttgctgatcaattaggtctaagatcgaaattctatgttatgggattttcaatggggggacaggctgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="31546" stop="28708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31246" g_stop="31014" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31013" i_stop="29533" i_length="1481">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29532" g_stop="29273" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="493" r_length="260" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29272" i_stop="29192" i_length="81">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29191" g_stop="29008" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="677" r_length="184" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E323317" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323317" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31246" e_stop="31014"/>
          <exon e_start="29532" e_stop="29273"/>
          <exon e_start="29191" e_stop="29008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGATTTCGAACAATTATTAAATCAGTGAGATGAGACTCAGATCTCTTCAACCTTCATTTTTGTATAATTTTTGTAAATCTACAGTGTGAATACAAAATTTGTAATTTCAAAATCAAGAACTTGATTCAGCAAAAAAAAAAAAAAAATGGCAACCAAGAAGATTTCAGCAGCTTCAGCTAGGGCTCATACTCGTAAAGCTAAGCAAAAAAGTTCTATTCCTTTTCCTTCTGGTGAGTTTTCTTTTTTTATTTTTGGTATAAATTTCCAGTTTTATTTTATCATATGTTGAAAATATAGTGAAAAAACTGAATTTAGTATGTAAAGTTAGTTAGTTTCTTTAACTAGAGGTCTCAGGTTCGAGCTGAGGTAGGAGTTGCCTTTGTTAGAGGATAATTTACACTAAGGAGGGATTTTACCAATGTGAATCTGGATTTAATCGGGTTTCAATACAGGTATCGGACAGTTGATTGGGAAACCAAAAACAAAAATATTAATATTTGGTGGAAAGTTTTGATTTTGATATTTTCTCACATTTGATGTGTTTGTTGGGGCATATGGAAAATATAGTGAATTGAATCTTTATTATATAAAGTTGATAACTTTCTTAATTAGAGGTCTCGGGTTCAAATTAGGTAAAGAGTTTCCTTTGTTTGGGAGTATTTTATCCCTAAGGTGGGATTTCCAATGCAAAATTTGGATTTAGTCGGGTTTCAATGCGGGTACCGGACACCGAGTTTGAGAAACCAAAAACAAAAGTTGATAACTTTGTTGCATTTGGTGGGGAGTTTTTGATATTGATTGTGATTTTGAAAGTTTTTCTCACACTTCAATGAGTTTGTTGGAGCATGTAGTGAATTTAGTGAAGAACTGAATCTTTATTTTGTAAAGTTGATAACTTTCTTAACTAGTGGTGTTTGGTTCAAGCCTGGCTAGGAGTCTCCCTTTGTTAGGGAGCTTTTATCCCCAATGTGGGACTTTCCAGGATGAATCTAGAATTAGTCGCTCCCAATGTAGGTATTGGACGGACATTCGGTTAATCAAAAACAAAACTTGGTTATGCTTTTGGTACTCTTTTCTCACATCAGAATGAGTTTGTTGAGGCATGTAGAAAGTATAGTGATGAACTGAATCTTTGTTCTGTAAAGTTAATAACTTTTCTAACCAAAGGTGTCGGGTTTGATATGAGGTAGGGAGCCTCTATTGTAACGGATCATTTTATCCTCCAATGTGGGACTTTCCGACACGAATATGGATTTAGTCAGGTCCCAATGTGGGTACTAGACACTGGGTTGGGACACCAAAAACAGACTTTGTTACATTTGGTGGAAAGTTTTTTGCTTTTTTTCTTACATTTGAATGCCCGTGTTAGTATCATTTTAGTTAGAAACTGCAAATATAAATTATAATGGTTGTTTACTTAGAACCAAATATTTTGAGTTTGCAAATGCTTCTATTCAAAATTCAAAGAAAATTCTTGTATTATTAGATGCTCTTCATAAATCTTGAAACTGGATATATTCCGTATGTTCTCAAAACCGAAGATTTTAGTTTAACTTAATTTAAGTTGCTTGATTGTGCAAATGTTTCTCTAAACATTGTCCTTTTTTTTAAAAAGTTTTTTTAAGATGCTTGAATACTATTTCTCGTCTTTTTGTCTTTCCAAATTGTTTAAATTCTCAATTATCTTGTAACTCAAATGATATCATTTCAGGGGCATTTGCGAAAATTCTTCTGGTTGTTTTGATTGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAAGTAACGTCACTTGGTTCTCTTGTTCGTATTCTTTTATGGACCAACTATGTATTTTGGACATAATTTTTGTTTTTCTTGCAGGATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTT</genome_strand>
        <mrna_strand>AAAAGATTTCGAACAATTATTAAATCAGTGAGATGAGACTCAGATCTCTTCAACCTTCATTTTTGTATAATTTTTGTAAATCTACAGTGTGAATACAAAATTTGTAATTTCAAAATCAAGAACTTGATTCAGCAAAAAAAAAAAAAAAATGGCAACCAAGAAGATTTCAGCAGCTTCAGCTAGGGCTCATACTCGTAAAGCTAAGCAAAAAAGTTCTATTCCTTTTCCTTCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCATTTGCGAAAATTCTTCTGGTTGTTTTGATTGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAAAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAA.................................................................................GATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAAGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E264446" ref_strand="+" ref_description="SGN-E264446 [cLEG-67-P3]">
      <seq>gaaaattcttctggttgttttgattgggttattagcgtggggttatcaagcaacacgaccacctccccctaagacctgtggatccccagatggccctcccgtcactgcacctagaatcaaacttagtgatggaagacacttggcttacaaggagactggtgtacttagagataatgcaaaatataagattgtatatatccatgggtacgatggttgtaggcatgatgttccaattaacatcctctctcaagatgtcatcgaaagtttaggagtgtacattgtttcctttgacagacctggttatggagaaagtgatcctaatccaaaacgaacagtcaagagcttagcttttgacatacaggagcttgctgatcaattaggtctaggatccaaattctatgttatgggattttcaatgggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="29822" stop="28719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29522" g_stop="29273" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29272" i_stop="29192" i_length="81">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29191" g_stop="29019" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="423" r_length="173" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E264446" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264446" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29522" e_stop="29273"/>
          <exon e_start="29191" e_stop="29019"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATTCTTCTGGTTGTTTTGATTGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAAGTAACGTCACTTGGTTCTCTTGTTCGTATTCTTTTATGGACCAACTATGTATTTTGGACATAATTTTTGTTTTTCTTGCAGGATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGG</genome_strand>
        <mrna_strand>GAAAATTCTTCTGGTTGTTTTGATTGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAA.................................................................................GATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCCAAATTCTATGTTATGGGATTTTCAATGGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E392812" ref_strand="+" ref_description="SGN-E392812 [TUS-37-A20]">
      <seq>tcgcgacctaatgataggtttcgggacatgggaatttgatccgatggaactagaaaacccattccataacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctaaaaaggggctattggttttagtattggattcaacgatcattttttgtcattgaacaaatttgaatattttgttgataattatatcccacgtaagtcgttgggactcttcaaaaatattgttatataaaaaaaaaaaaaaaaaagaggggggggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="32464" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32164" g_stop="31762" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31761" i_stop="31115" i_length="647">
            <donor d_prob="0.655" d_score="0.94"/>
            <acceptor a_prob="0.436" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31114" g_stop="31086" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="432" r_length="29" r_score="0.586"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E392812" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392812" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32164" e_stop="31762"/>
          <exon e_start="31114" e_stop="31086"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAACATTGTTTTTTTGATATCAATAACATTGTGTAATATTGGATTCTATGACTCTTGTCATTGAACAAACTAGTTAATATTTAATAAGGACTTTGAAAGTATACGCGGTGTCAAGATTTTCAGTAAGCGTTTTAAAATTTGGAAAAAATAAATACACGAAGTAATCGAATGGGGTTCGACATCTATTATATAAATCTAAATCATGTATAAATAATATAATTTTTCGCTGAAAGAGGTTCAAACCTCCTAGCAATAAGCTAGCTCCGCCCCGGGTCTGAAGTAGTCGCTAATAGATATCTTATGAAATTAGTTGAGAAATACACAAATACGGTTAATATTTGAAAAATATTACTATATATTAAAAAGAAATTATTTATTGTTTTGAGAGTCATTTTTTTTAAAATAAAATATAAGGGTAAAAAATAAAGGAAGAAAGAAAATTGCCAAATGATAGATCATATGCTAAAAAAGATTTCGAACAATTATTAAATCAGTGAGATGAGACTCAGATCTCTTCAACCTTCATTTTTGTATAATTTTTGTAAATCTACAGTGTGAATACAAAATTTGTAATTTCAAAATCAAGAACTTGATTCAGCAAAAAAAAAAAAAAAATGGCAACCAAGA</genome_strand>
        <mrna_strand>TCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAGAGGGGGGGGGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E377607" ref_strand="+" ref_description="SGN-E377607 [TUS-20-C10](-)">
      <seq>aaacaagcgtactacgaacagcttgtgcaggatcaatggacgcttcgcatcgcacactattttccatggctgacttactggtggaacactcaaaaattatttccttcttccagcgttgcaacgggcagcgaggatattcttttagaacaagacagagttcttatgcctatctttgattcatatcagagtaaatatcgggacttggtaagacagcaaggggagtacgagtccatccatcgcgacctaatgataggtttcgggacatgggaatttgatccgatggaactagaaaacccattccataacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattttacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctaaaaaggggctattggttttagtattggattcaacgatcattttttgtcattgaacaaatttgaatattttgttgataattatatcccacgtaagtcgttgggactcttcaaaaatattgttatatacttgcatgtaagtcggatcttccaaatactttacatttttgaagagttcgattaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="33043" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32743" g_stop="32546" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32202" g_stop="31709" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="692" r_length="494" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31708" i_stop="31115" i_length="594">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.436" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31114" g_stop="31098" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="693" r_stop="709" r_length="17" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E377607" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377607" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32743" e_stop="32546"/>
          <exon e_start="32202" e_stop="31709"/>
          <exon e_start="31114" e_stop="31098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGGGTGAGCACTCGTCTGTCTTCTTCACATATCCACATTTCATTTTGCAAATTTGGATAAACACCATGCTTCAACATCAATCCTTATATACGTAAATGAAAAAATAAGGACAAATAGTGTTACAAGTACGTTTTCTGCATCATTATCGACTGTAGGATAGAGTCATAACTTGTTATAACTAGTTAAATTACGCTAATAGAATTGTGTATAACTTAATTCCACAATCATATGTGTTGATTTTGATTAGCAAATTGTTTGAGTTAACTCTCCTAAATCTTGTGCTTGCATTATGAATACTAGCAACTAACAAGTACTTAACTCTGAGTTCTGTTCTGTTTTTCTTTAGGACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAACATTGTTTTTTTGATATCAATAACATTGTGTAATATTGGATTCTATGACTCTTGTCATTGAACAAACTAGTTAATATTTAATAAGGACTTTGAAAGTATACGCGGTGTCAAGATTTTCAGTAAGCGTTTTAAAATTTGGAAAAAATAAATACACGAAGTAATCGAATGGGGTTCGACATCTATTATATAAATCTAAATCATGTATAAATAATATAATTTTTCGCTGAAAGAGGTTCAAACCTCCTAGCAATAAGCTAGCTCCGCCCCGGGTCTGAAGTAGTCGCTAATAGATATCTTATGAAATTAGTTGAGAAATACACAAATACGGTTAATATTTGAAAAATATTACTATATATTAAAAAGAAATTATTTATTGTTTTGAGAGTCATTTTTTTTAAAATAAAATATAAGGGTAAAAAATAAAGGAAGAAAGAAAATTGCCAAATGATAGATCATATGCTAAAAAAGATTTCGAACAATTATTAAATCAGTGAGATGAGACTCAGATCTCTTCAACCTTCATTTTTGTATAATTTTTGTAAATCTACAGTGTGAATACAAAATTTGTAATTTCAAAATCAAGAACTTGATTCAGCAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>AAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGG.......................................................................................................................................................................................................................................................................................................................................................GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTTTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E222561" ref_strand="+" ref_description="SGN-E222561 [cLEL-16-M9](-)">
      <seq>gagtccatccatcgcgacctaatgataggtttcgggacatgggaatttgatccgatggaactagaaaacccattccataacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctaaaaaggggctattggttttagtattggattcaacgatcattttttgtcattgaacaaatttgaatattttgttgataattatatcccacgtaagtcgttgggactcttcaaaaatattgttatatacttgcatgtaagtcggatcttccaaatactttacatttttgaagagttcgattaacattgtttttttgatacccataacattgtgtaatattggattctaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="32475" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32175" g_stop="31665" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31664" i_stop="31115" i_length="550">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.436" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31114" g_stop="31098" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="528" r_length="17" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E222561" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222561" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32175" e_stop="31665"/>
          <exon e_start="31114" e_stop="31098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAACATTGTTTTTTTGATATCAATAACATTGTGTAATATTGGATTCTATGACTCTTGTCATTGAACAAACTAGTTAATATTTAATAAGGACTTTGAAAGTATACGCGGTGTCAAGATTTTCAGTAAGCGTTTTAAAATTTGGAAAAAATAAATACACGAAGTAATCGAATGGGGTTCGACATCTATTATATAAATCTAAATCATGTATAAATAATATAATTTTTCGCTGAAAGAGGTTCAAACCTCCTAGCAATAAGCTAGCTCCGCCCCGGGTCTGAAGTAGTCGCTAATAGATATCTTATGAAATTAGTTGAGAAATACACAAATACGGTTAATATTTGAAAAATATTACTATATATTAAAAAGAAATTATTTATTGTTTTGAGAGTCATTTTTTTTAAAATAAAATATAAGGGTAAAAAATAAAGGAAGAAAGAAAATTGCCAAATGATAGATCATATGCTAAAAAAGATTTCGAACAATTATTAAATCAGTGAGATGAGACTCAGATCTCTTCAACCTTCATTTTTGTATAATTTTTGTAAATCTACAGTGTGAATACAAAATTTGTAATTTCAAAATCAAGAACTTGATTCAGCAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>GAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAACATTGTTTTTTTGATACCCATAACATTGTGTAATATTGGATTCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E222472" ref_strand="+" ref_description="SGN-E222472 [cLEL-16-M9](-)">
      <seq>gtaccagtcattctacaacgatttcatcgcgaagaaactaccataggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctaaaaaggggctattggttttagtattggattcaacgatcattttttgtcattgaacaaatttgaatattttgttgataattatatcccacgtaagtcgttgggactcttcaaaaatattgttatatacttgcatgtaagtcggatcttccaaatactttacatttttgaagagttcgattaacattgtttttttgatatcaataacattgtgtaatattggattctaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="32349" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32049" g_stop="31665" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="387" r_length="387" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31664" i_stop="31115" i_length="550">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.436" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31114" g_stop="31098" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="404" r_length="17" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E222472" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32049" e_stop="31665"/>
          <exon e_start="31114" e_stop="31098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACCAGTCATTCTACAACGA-TTCATCGCGAAGAAACTACCAT-GGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAACATTGTTTTTTTGATATCAATAACATTGTGTAATATTGGATTCTATGACTCTTGTCATTGAACAAACTAGTTAATATTTAATAAGGACTTTGAAAGTATACGCGGTGTCAAGATTTTCAGTAAGCGTTTTAAAATTTGGAAAAAATAAATACACGAAGTAATCGAATGGGGTTCGACATCTATTATATAAATCTAAATCATGTATAAATAATATAATTTTTCGCTGAAAGAGGTTCAAACCTCCTAGCAATAAGCTAGCTCCGCCCCGGGTCTGAAGTAGTCGCTAATAGATATCTTATGAAATTAGTTGAGAAATACACAAATACGGTTAATATTTGAAAAATATTACTATATATTAAAAAGAAATTATTTATTGTTTTGAGAGTCATTTTTTTTAAAATAAAATATAAGGGTAAAAAATAAAGGAAGAAAGAAAATTGCCAAATGATAGATCATATGCTAAAAAAGATTTCGAACAATTATTAAATCAGTGAGATGAGACTCAGATCTCTTCAACCTTCATTTTTGTATAATTTTTGTAAATCTACAGTGTGAATACAAAATTTGTAATTTCAAAATCAAGAACTTGATTCAGCAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>GTACCAGTCATTCTACAACGATTTCATCGCGAAGAAACTACCATAGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAACATTGTTTTTTTGATATCAATAACATTGTGTAATATTGGATTCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E397343" ref_strand="+" ref_description="SGN-E397343 [TUS-45-D23](-)">
      <seq>ctcaagtatattcctcacagattggctggagcaattcttctaacaccagtgactaactactggtggggtagtttcccagcaaacttgactaaacaagcgtactacgaacagctcgtgcaggatcaatggacgttgcggattgcacactacttaccatggctgacttactggtggaacactcaaagattgtttccttcttccagcgttgcaacgttcagtgaggatattctgttcgagcaagacagagttttaatgcctatctttgattcgtatcagagtaaatatcgggacttggtaagacagcaaggggagtacgagtccatccatcgcgacataatgatagggttcgggacatgggagtttgatccgatggaactagaaaatccattccctaacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattttacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctataaagggcttttagtattggattcaatgatcatttttgtcattgaacaaatttgaatatgtagttaataattaaattctacttaagttgattttagctaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="33458" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33158" g_stop="33139" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.791" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32813" g_stop="32546" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="288" r_length="268" r_score="0.918"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343">
            <donor d_prob="0.990" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32202" g_stop="31795" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="688" r_length="400" r_score="0.941"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31794" i_stop="31127" i_length="668">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.549" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31126" g_stop="31099" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="689" r_stop="716" r_length="28" r_score="0.714"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E397343" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E397343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33158" e_stop="33139"/>
          <exon e_start="32813" e_stop="32546"/>
          <exon e_start="32202" e_stop="31795"/>
          <exon e_start="31126" e_stop="31099"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAAGTATATTCCTCACAGGTACTTTTAGTTTGCTCGCACCTCGACTATTTTAACTATGTACCTGTTACGTCCCACCAGCATAAATACGAGTACCTTTGATCTACCAATTCTTAAGCAGATGAGAAGAAGTCATTTTATGAATTGGCTTGATTGTTCCTCTTAGTATAAATTGAATCTTCAGTGAAAGTAGTTTAGTTCTTTGGATTTAACTTATAGACACTGACGATGCTAATGACTTTTACATTATCAGTTTACGTTAATTTGTCGTAGTTATCTTTTAGGTGACCTTCTCGGGTGCACATAGGTTTCCATCTTAACTAGTGACATTTGAAATGTGTAACAGATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGGGTGAGCACTCGTCTGTCTTCTTCACATATCCACATTTCATTTTGCAAATTTGGATAAACACCATGCTTCAACATCAATCCTTATATACGTAAATGAAAAAATAAGGACAAATAGTGTTACAAGTACGTTTTCTGCATCATTATCGACTGTAGGATAGAGTCATAACTTGTTATAACTAGTTAAATTACGCTAATAGAATTGTGTATAACTTAATTCCACAATCATATGTGTTGATTTTGATTAGCAAATTGTTTGAGTTAACTCTCCTAAATCTTGTGCTTGCATTATGAATACTAGCAACTAACAAGTACTTAACTCTGAGTTCTGTTCTGTTTTTCTTTAGGACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAACATTGTTTTTTTGATATCAATAACATTGTGTAATATTGGATTCTATGACTCTTGTCATTGAACAAACTAGTTAATATTTAATAAGGACTTTGAAAGTATACGCGGTGTCAAGATTTTCAGTAAGCGTTTTAAAATTTGGAAAAAATAAATACACGAAGTAATCGAATGGGGTTCGACATCTATTATATAAATCTAAATCATGTATAAATAATATAATTTTTCGCTGAAAGAGGTTCAAACCTCCTAGCAATAAGCTAGCTCCGCCCCGGGTCTGAAGTAGTCGCTAATAGATATCTTATGAAATTAGTTGAGAAATACACAAATACGGTTAATATTTGAAAAATATTACTATATATTAAAAAGAAATTATTTATTGTTTTGAGAGTCATTTTTTTTAAAATAAAATATAAGGGTAAAAAATAAAGGAAGAAAGAAAATTGCCAAATGATAGATCATATGCTAAAAAAGATTTCGAACAATTATTAAATCAGTGAGATGAGACTCAGATCTCTTCAACCTTCATTTTTGTATAATTTTTGTAAATCTACAGTGTGAATACAAAATTTGTAATTTCAAAATCAAGAACTTGATTCAGCAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>CTCAAGTATATTCCTCACAG.....................................................................................................................................................................................................................................................................................................................................ATTGGCTGGAGCAATTCTTCTAACACCAGTGACTAACTACTGGTGGGGTAGTTTCCCAGCAAACTTGACTAAACAAGCGTACTACGAACAGCTCGTGCAGGATCAATGGACGTTGCGGATTGCACACTACTTACCATGGCTGACTTACTGGTGGAACACTCAAAGATTGTTTCCTTCTTCCAGCGTTGCAACGTTCAGTGAGGATATTCTGTTCGAGCAAGACAGAGTTTTAATGCCTATCTTTGATTCGTATCAGAGTAAATATCGG.......................................................................................................................................................................................................................................................................................................................................................GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACATAATGATAGGGTTCGGGACATGGGAGTTTGATCCGATGGAACTAGAAAATCCATTCCCTAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTTTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTATAAA-GGGC------TTTTAGTATTGGATTCAATGATCA-TTTTTGTCATTGAACAAATTTGAATATGTAGTTAATAATTAAATTCTACTTAAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTAGCTAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E393015" ref_strand="+" ref_description="SGN-E393015 [TUS-37-C22](-)">
      <seq>tcgcgacttaatgataggtttcgggacatgggaatttgatccgatggaactagaaaacccattccataacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctaaaaaggggctattggttttagtattggattcaacgatcattttttgtcattgaacaaatttgaatattttgttgataattatatcccacgtaagtcgttgggactcttcaaaaatattgttatataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="32464" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32164" g_stop="31762" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31761" i_stop="31115" i_length="647">
            <donor d_prob="0.655" d_score="0.94"/>
            <acceptor a_prob="0.436" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31114" g_stop="31103" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="415" r_length="12" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E393015" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393015" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32164" e_stop="31762"/>
          <exon e_start="31114" e_stop="31103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAACATTGTTTTTTTGATATCAATAACATTGTGTAATATTGGATTCTATGACTCTTGTCATTGAACAAACTAGTTAATATTTAATAAGGACTTTGAAAGTATACGCGGTGTCAAGATTTTCAGTAAGCGTTTTAAAATTTGGAAAAAATAAATACACGAAGTAATCGAATGGGGTTCGACATCTATTATATAAATCTAAATCATGTATAAATAATATAATTTTTCGCTGAAAGAGGTTCAAACCTCCTAGCAATAAGCTAGCTCCGCCCCGGGTCTGAAGTAGTCGCTAATAGATATCTTATGAAATTAGTTGAGAAATACACAAATACGGTTAATATTTGAAAAATATTACTATATATTAAAAAGAAATTATTTATTGTTTTGAGAGTCATTTTTTTTAAAATAAAATATAAGGGTAAAAAATAAAGGAAGAAAGAAAATTGCCAAATGATAGATCATATGCTAAAAAAGATTTCGAACAATTATTAAATCAGTGAGATGAGACTCAGATCTCTTCAACCTTCATTTTTGTATAATTTTTGTAAATCTACAGTGTGAATACAAAATTTGTAATTTCAAAATCAAGAACTTGATTCAGCAAAAAAAAAAA</genome_strand>
        <mrna_strand>TCGCGACTTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E310575" ref_strand="+" ref_description="SGN-E310575 [cLEZ-19-D12]">
      <seq>aatccaatattacacaatgttattgatatcaaaaaaacaatgttaatcgaactcttcaagaatgtaaagtctttggaagatccgacttacatgcaagtatataacaatatttttgaagagtcccaacgacttacgggggatgtaattatcaacaaaatattcaaatttgttcactgacaaaaaaggatcgttgaatccaatactaaaaccaatagcccctttttagcttttacataacaaaaggctctccaagtaaaaatgtcttcataactttatctcccattccttcagcccatggaaacatatgacctccacctttcatttcatgatagtgaatccatggtagtttcttcgcgatgaatcgttgtagaatgactggtacatgcccgtctttatcgccttgccagatgtgaacggacccttccccgttatggaatgggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="31368" stop="32408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31668" g_stop="32108" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E310575" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31668" e_stop="32108"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCAATATTACACAATGTTATTGATATCAAAAAAACAATGTTAATCGAACTCTTCAAAAATGTAAAGTATTTGGAAGATCCGACTTACATGCAAGTATATAACAATATTTTTGAAGAGTCCCAACGACTTACGTGGGATATAATTATCAACAAAATATTCAAATTTGTTCAATGACAAAAAATGATCGTTGAATCCAATACTAAAACCAATAGCCCCTTTTTAGCTTTTACATAACAAAAGGCTCTCCAAGTAAAAATGTCTTCATAACTTTATCTCCCATTCCTTCAGCCCATGGAAACATATGACCTCCACCTTTCATTTCATGATAGTGAATCCATGGTAGTTTCTTCGCGATGAATCGTTGTAGAATGACTGGTACATGCCCGTCTTCATCGCCTTGCCAGATGTGAACGGACCCTTCCCCGTTATGGAATGGGT</genome_strand>
        <mrna_strand>AATCCAATATTACACAATGTTATTGATATCAAAAAAACAATGTTAATCGAACTCTTCAAGAATGTAAAGTCTTTGGAAGATCCGACTTACATGCAAGTATATAACAATATTTTTGAAGAGTCCCAACGACTTACGGGGGATGTAATTATCAACAAAATATTCAAATTTGTTCACTGACAAAAAAGGATCGTTGAATCCAATACTAAAACCAATAGCCCCTTTTTAGCTTTTACATAACAAAAGGCTCTCCAAGTAAAAATGTCTTCATAACTTTATCTCCCATTCCTTCAGCCCATGGAAACATATGACCTCCACCTTTCATTTCATGATAGTGAATCCATGGTAGTTTCTTCGCGATGAATCGTTGTAGAATGACTGGTACATGCCCGTCTTTATCGCCTTGCCAGATGTGAACGGACCCTTCCCCGTTATGGAATGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E392822" ref_strand="+" ref_description="SGN-E392822 [TUS-37-C22]">
      <seq>tcgcgacctaatgataggtttcgggacatgggaatttgatccgatggaactagaaaacccattccataacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaataaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctaaaaaggggctattggttttagtattggattcatctatcattttttgtcattgaacaaatttgaatattttgttgataattatatcccacgtaagtcgttgggactcttcaaacatattgttattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="32464" stop="31465"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32164" g_stop="31765" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E392822" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392822" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32164" e_stop="31765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATA</genome_strand>
        <mrna_strand>TCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAATAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCATCTATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAACATATTGTTATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E298781" ref_strand="+" ref_description="SGN-E298781 [cLET-44-K23]">
      <seq>cgcgacctaatgataggtttcgggacatgggaatttgatccgatggaactagaaaacccattccataacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctaaaaaggggctattggttttagtattggattcaacgatcattttttgtcattgaacaaatttgaatattttggtgataattatatcccacgtaagtcgttgggactcttcaaaaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="32463" stop="31475"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32163" g_stop="31775" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="389" r_length="389" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E298781" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298781" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32163" e_stop="31775"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATA</genome_strand>
        <mrna_strand>CGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGGTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E357935" ref_strand="+" ref_description="SGN-E357935 [cTOS-24-H18]">
      <seq>ggtggggtagtttcccagcaaacttgactaaacaagcgtactacgaacagctcgtgcaggatcaatggacgttgcggattgcacactacttaccatggctgacttactggtggaacactcaaagattgtttccttcttccagcgttgcaacgttcagtgaggatattctgttcgagcaagacagagttctaatgcctatctttgattcgtatcagagtaaatatcgggacttggtaagacagcaaggggagtacgagtccatccatcgcgacataatgatagggttcgggacatgggagtttgatccgatggaactagaaaatccattccctaacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctataaagggcttttagtattggattcaatgatcatttttgtcattgaacaaatttgaatatgtagttaataattaaattctacttaagttgattttagctaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="33072" stop="31492"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32772" g_stop="32546" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.916"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32202" g_stop="31802" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="620" r_length="393" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E357935" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32772" e_stop="32546"/>
          <exon e_start="32202" e_stop="31802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGGGTGAGCACTCGTCTGTCTTCTTCACATATCCACATTTCATTTTGCAAATTTGGATAAACACCATGCTTCAACATCAATCCTTATATACGTAAATGAAAAAATAAGGACAAATAGTGTTACAAGTACGTTTTCTGCATCATTATCGACTGTAGGATAGAGTCATAACTTGTTATAACTAGTTAAATTACGCTAATAGAATTGTGTATAACTTAATTCCACAATCATATGTGTTGATTTTGATTAGCAAATTGTTTGAGTTAACTCTCCTAAATCTTGTGCTTGCATTATGAATACTAGCAACTAACAAGTACTTAACTCTGAGTTCTGTTCTGTTTTTCTTTAGGACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCAC</genome_strand>
        <mrna_strand>GGTGGGGTAGTTTCCCAGCAAACTTGACTAAACAAGCGTACTACGAACAGCTCGTGCAGGATCAATGGACGTTGCGGATTGCACACTACTTACCATGGCTGACTTACTGGTGGAACACTCAAAGATTGTTTCCTTCTTCCAGCGTTGCAACGTTCAGTGAGGATATTCTGTTCGAGCAAGACAGAGTTCTAATGCCTATCTTTGATTCGTATCAGAGTAAATATCGG.......................................................................................................................................................................................................................................................................................................................................................GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACATAATGATAGGGTTCGGGACATGGGAGTTTGATCCGATGGAACTAGAAAATCCATTCCCTAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTATAAA-GGGC------TTTTAGTATTGGATTCAATGATCA-TTTTTGTCATTGAACAAATTTGAATATGTAGTTAATAATTAAATTCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E352280" ref_strand="+" ref_description="SGN-E352280 [cTOS-9-A11]">
      <seq>ggatattctgttcgagcaagacagagttctaatgcctatctttgattcgtatcagagtaaatatcgggacttggtaagacagcaaggggagtacgagtccatccatcgcgacataatgatagggttcgggacatgggagtttgatccgatggaactagaaaatccattccctaacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctataaagggcttttagtattggattcaatgatcatttttgtcattgaacaaatttgaatatgtagttaataattaaattctacttaagttgattttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="32912" stop="31492"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32612" g_stop="32546" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32202" g_stop="31802" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="460" r_length="393" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="474" polyA_stop="484"/>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E352280" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32612" e_stop="32546"/>
          <exon e_start="32202" e_stop="31802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGGGTGAGCACTCGTCTGTCTTCTTCACATATCCACATTTCATTTTGCAAATTTGGATAAACACCATGCTTCAACATCAATCCTTATATACGTAAATGAAAAAATAAGGACAAATAGTGTTACAAGTACGTTTTCTGCATCATTATCGACTGTAGGATAGAGTCATAACTTGTTATAACTAGTTAAATTACGCTAATAGAATTGTGTATAACTTAATTCCACAATCATATGTGTTGATTTTGATTAGCAAATTGTTTGAGTTAACTCTCCTAAATCTTGTGCTTGCATTATGAATACTAGCAACTAACAAGTACTTAACTCTGAGTTCTGTTCTGTTTTTCTTTAGGACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCAC</genome_strand>
        <mrna_strand>GGATATTCTGTTCGAGCAAGACAGAGTTCTAATGCCTATCTTTGATTCGTATCAGAGTAAATATCGG.......................................................................................................................................................................................................................................................................................................................................................GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACATAATGATAGGGTTCGGGACATGGGAGTTTGATCCGATGGAACTAGAAAATCCATTCCCTAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTATAAA-GGGC------TTTTAGTATTGGATTCAATGATCA-TTTTTGTCATTGAACAAATTTGAATATGTAGTTAATAATTAAATTCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E397467" ref_strand="+" ref_description="SGN-E397467 [TUS-45-D24](-)">
      <seq>gtaagacagcaaggggagtacgagttcttccctcgccgacataatgatagggttcgggacatgggagtaaaataagatggaactagaaaatccattccctaacggggaagggtccgttcacatttggcaaggcgatgaagacgggcatgtaccagtcattttacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctataaagggcttttagtattggattcaatgatcatttttgtcattgaacaaatttgaataggtagttaataattaaattctacttaagttgattttagatagaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="32496" stop="30798"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32196" g_stop="31802" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="406" polyA_stop="423"/>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E397467" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E397467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32196" e_stop="31802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGACAGCAAGGGGAGTACGAGTCCATCCATCG-CGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCAC</genome_strand>
        <mrna_strand>GTAAGACAGCAAGGGGAGTACGAGTTCTTCCCTCGCCGACATAATGATAGGGTTCGGGACATGGGAGTAAAATAAGATGGAACTAGAAAATCCATTCCCTAACGGGGAAGGGTCCGTTCACATTTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTTTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTATAAA-GGGC------TTTTAGTATTGGATTCAATGATCA-TTTTTGTCATTGAACAAATTTGAATAGGTAGTTAATAATTAAATTCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E393014" ref_strand="+" ref_description="SGN-E393014 [TUS-37-C20]">
      <seq>tcgcgacctaatgatatgtttcgggacatgggaatttgatccgatggaactagaaaacccattccataacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctaaaaaggggctattggttttagtattggattcatttttttttttttgtcattgaacaaatttgaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="32464" stop="31524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32164" g_stop="31824" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E393014" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>341</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32164" e_stop="31824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATAT</genome_strand>
        <mrna_strand>TCGCGACCTAATGATATGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCATTTTTTTTTTTTTGTCATTGAACAAATTTGAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E303777" ref_strand="+" ref_description="SGN-E303777 [cLEX-4-I4]">
      <seq>acaagcgtactacgaacagcttgtgcaggatcaatggacgcttcgcatcgcacactattttccatggctgacttactggtggaacactcaaaaattatttccttcttccagcgttgcaacgggcagcgaggatattcttttagaacaagacagagttcttatgcctatctttgattcatatcagagtaaatatcgggacttggtaagacagcaaggggagtacgagtccatccatcgcgacctaatgataggtttcgggacatgggaatttgatccgatggaactagaaaacccattccataacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttttgttatgtaaaagctaaaaaggggctattggttatagtattggattcaacgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="33041" stop="31554"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32741" g_stop="32546" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="196" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32202" g_stop="31854" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="545" r_length="349" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E303777" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32741" e_stop="32546"/>
          <exon e_start="32202" e_stop="31854"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGGGTGAGCACTCGTCTGTCTTCTTCACATATCCACATTTCATTTTGCAAATTTGGATAAACACCATGCTTCAACATCAATCCTTATATACGTAAATGAAAAAATAAGGACAAATAGTGTTACAAGTACGTTTTCTGCATCATTATCGACTGTAGGATAGAGTCATAACTTGTTATAACTAGTTAAATTACGCTAATAGAATTGTGTATAACTTAATTCCACAATCATATGTGTTGATTTTGATTAGCAAATTGTTTGAGTTAACTCTCCTAAATCTTGTGCTTGCATTATGAATACTAGCAACTAACAAGTACTTAACTCTGAGTTCTGTTCTGTTTTTCTTTAGGACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGAT</genome_strand>
        <mrna_strand>ACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGG.......................................................................................................................................................................................................................................................................................................................................................GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTATAGTATTGGATTCAACGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E377608" ref_strand="+" ref_description="SGN-E377608 [TUS-20-C10]">
      <seq>gactttagctcttgatatagaggaattagctgatcaattggaattaggatctaagttttatgttatcggattttctatgggtggacaagctgtttggggccttctcaagtatattcctcacagattggctggagcaattcttctaacacccgtaactaactactggtggggtagttttcctgcaaacttgactaaacaagcgtactacgaacagcttgtgcaggatcaatggacgcttcgcatcgcacactattttccatggctgacttactggtggaacactcaaaaattatttccttcttccagcgttgcaacgggcagcgaggatattcttttagaacaagacagagttcttatgcctatctttgattcatatcagagtaaatatcgggacttggtaagacagcaaggggagtacgagtccatccatcgcgacctaatgataggtttcgggacatgggaatttgatccgatggaactagaaaacccattccataacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaagaaactaccatggattcactatcatgaaatgaaaggtggaggtcatatgtttccatgggctgaaggaatgggagataaagttatgaagacatttttacttggagagccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="33561" stop="31607"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33261" g_stop="33139" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.791" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32813" g_stop="32546" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="391" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32202" g_stop="31907" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="687" r_length="296" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E377608" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377608" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33261" e_stop="33139"/>
          <exon e_start="32813" e_stop="32546"/>
          <exon e_start="32202" e_stop="31907"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAGGTACTTTTAGTTTGCTCGCACCTCGACTATTTTAACTATGTACCTGTTACGTCCCACCAGCATAAATACGAGTACCTTTGATCTACCAATTCTTAAGCAGATGAGAAGAAGTCATTTTATGAATTGGCTTGATTGTTCCTCTTAGTATAAATTGAATCTTCAGTGAAAGTAGTTTAGTTCTTTGGATTTAACTTATAGACACTGACGATGCTAATGACTTTTACATTATCAGTTTACGTTAATTTGTCGTAGTTATCTTTTAGGTGACCTTCTCGGGTGCACATAGGTTTCCATCTTAACTAGTGACATTTGAAATGTGTAACAGATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGGGTGAGCACTCGTCTGTCTTCTTCACATATCCACATTTCATTTTGCAAATTTGGATAAACACCATGCTTCAACATCAATCCTTATATACGTAAATGAAAAAATAAGGACAAATAGTGTTACAAGTACGTTTTCTGCATCATTATCGACTGTAGGATAGAGTCATAACTTGTTATAACTAGTTAAATTACGCTAATAGAATTGTGTATAACTTAATTCCACAATCATATGTGTTGATTTTGATTAGCAAATTGTTTGAGTTAACTCTCCTAAATCTTGTGCTTGCATTATGAATACTAGCAACTAACAAGTACTTAACTCTGAGTTCTGTTCTGTTTTTCTTTAGGACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTT</genome_strand>
        <mrna_strand>GACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAG.....................................................................................................................................................................................................................................................................................................................................ATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGG.......................................................................................................................................................................................................................................................................................................................................................GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E232965" ref_strand="+" ref_description="SGN-E232965 [cLED-6-G6]">
      <seq>gactttagctcttgatatagaggaattagctgatcaattggaattaggatctaagttttatgttatcggattttctatgggtggacaagctgtttggggccttctcaagtatattcctcacagattggctggagcaattcttctaacacccgtaactaactactggtggggtagttttcctgcaaacttgactaaacaagcgtactacgaacagcttgtgcaggatcaatggacgcttcgcatcgcacactattttccatggctgacttactggtggaacactcaaaaattatttccttcttccagcgttgcaacgggcagcgaggatattcttttagaacaagacagagttcttatgcctatctttgattcatatcagagtaaatatcgggacttggtaagacagcaaggggagtacgagtccatccatcgcgacctaatgataggtttcgggacatgggaatttgatccgatggaactagaaaacccattccataacggggaagggtccgttcacatctggcaaggcgatgaagacgggcatgtaccagtcattctacaacgattcatcgcgaagaaactaccatggattcactatcatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="33561" stop="31690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33261" g_stop="33139" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.791" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32813" g_stop="32546" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="391" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32202" g_stop="31990" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="604" r_length="213" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E232965" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33261" e_stop="33139"/>
          <exon e_start="32813" e_stop="32546"/>
          <exon e_start="32202" e_stop="31990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAGGTACTTTTAGTTTGCTCGCACCTCGACTATTTTAACTATGTACCTGTTACGTCCCACCAGCATAAATACGAGTACCTTTGATCTACCAATTCTTAAGCAGATGAGAAGAAGTCATTTTATGAATTGGCTTGATTGTTCCTCTTAGTATAAATTGAATCTTCAGTGAAAGTAGTTTAGTTCTTTGGATTTAACTTATAGACACTGACGATGCTAATGACTTTTACATTATCAGTTTACGTTAATTTGTCGTAGTTATCTTTTAGGTGACCTTCTCGGGTGCACATAGGTTTCCATCTTAACTAGTGACATTTGAAATGTGTAACAGATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGGGTGAGCACTCGTCTGTCTTCTTCACATATCCACATTTCATTTTGCAAATTTGGATAAACACCATGCTTCAACATCAATCCTTATATACGTAAATGAAAAAATAAGGACAAATAGTGTTACAAGTACGTTTTCTGCATCATTATCGACTGTAGGATAGAGTCATAACTTGTTATAACTAGTTAAATTACGCTAATAGAATTGTGTATAACTTAATTCCACAATCATATGTGTTGATTTTGATTAGCAAATTGTTTGAGTTAACTCTCCTAAATCTTGTGCTTGCATTATGAATACTAGCAACTAACAAGTACTTAACTCTGAGTTCTGTTCTGTTTTTCTTTAGGACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAA</genome_strand>
        <mrna_strand>GACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAG.....................................................................................................................................................................................................................................................................................................................................ATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGG.......................................................................................................................................................................................................................................................................................................................................................GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E338620" ref_strand="+" ref_description="SGN-E338620 [cTOE-15-B1]">
      <seq>caaagaccttagctcttgatattgaagaattagttgatcaattggaattgggacctaaattttatgttataggattttctatgggtggacaagctgtttggggtcttctcaagtatattcctcacagattggctggagcaattcttctaacaccagtgactaactacctggtggggtagtttcccagcaaacttgactaaacaagcgtacctacgaaccagctcgtgcaggatcaatggaccgttgcggattgcaccactacttacccatggctgacttactggtggaaccactcaaagattgtttccttcttccagcgttgcaacgttcagtgaggatattctgttcgagcaagacagagttctaatgcctatctttgattcgtatcagagtaaatatcgggacttggtaagacagcaaggggagtacgagtccctccatcgcgacataatgatagggttcgggacatgggagtttgatccgatggaactagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="33565" stop="31809"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33265" g_stop="33139" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.791" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32813" g_stop="32546" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="402" r_length="275" r_score="0.869"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32202" g_stop="32109" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="496" r_length="94" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E338620" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338620" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33265" e_stop="33139"/>
          <exon e_start="32813" e_stop="32546"/>
          <exon e_start="32202" e_stop="32109"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAGGTACTTTTAGTTTGCTCGCACCTCGACTATTTTAACTATGTACCTGTTACGTCCCACCAGCATAAATACGAGTACCTTTGATCTACCAATTCTTAAGCAGATGAGAAGAAGTCATTTTATGAATTGGCTTGATTGTTCCTCTTAGTATAAATTGAATCTTCAGTGAAAGTAGTTTAGTTCTTTGGATTTAACTTATAGACACTGACGATGCTAATGACTTTTACATTATCAGTTTACGTTAATTTGTCGTAGTTATCTTTTAGGTGACCTTCTCGGGTGCACATAGGTTTCCATCTTAACTAGTGACATTTGAAATGTGTAACAGATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTA-CTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTA-CTACGAA-CAGCTTGTGCAGGATCAATGGA-CGCTTCGCATCGCA-CACTA-TTTTCCATGGCTGACTTACTGGTGGAA-CACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGGGTGAGCACTCGTCTGTCTTCTTCACATATCCACATTTCATTTTGCAAATTTGGATAAACACCATGCTTCAACATCAATCCTTATATACGTAAATGAAAAAATAAGGACAAATAGTGTTACAAGTACGTTTTCTGCATCATTATCGACTGTAGGATAGAGTCATAACTTGTTATAACTAGTTAAATTACGCTAATAGAATTGTGTATAACTTAATTCCACAATCATATGTGTTGATTTTGATTAGCAAATTGTTTGAGTTAACTCTCCTAAATCTTGTGCTTGCATTATGAATACTAGCAACTAACAAGTACTTAACTCTGAGTTCTGTTCTGTTTTTCTTTAGGACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAA</genome_strand>
        <mrna_strand>CAAAGACCTTAGCTCTTGATATTGAAGAATTAGTTGATCAATTGGAATTGGGACCTAAATTTTATGTTATAGGATTTTCTATGGGTGGACAAGCTGTTTGGGGTCTTCTCAAGTATATTCCTCACAG.....................................................................................................................................................................................................................................................................................................................................ATTGGCTGGAGCAATTCTTCTAACACCAGTGACTAACTACCTGGTGGGGTAGTTTCCCAGCAAACTTGACTAAACAAGCGTACCTACGAACCAGCTCGTGCAGGATCAATGGACCGTTGCGGATTGCACCACTACTTACCCATGGCTGACTTACTGGTGGAACCACTCAAAGATTGTTTCCTTCTTCCAGCGTTGCAACGTTCAGTGAGGATATTCTGTTCGAGCAAGACAGAGTTCTAATGCCTATCTTTGATTCGTATCAGAGTAAATATCGG.......................................................................................................................................................................................................................................................................................................................................................GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCCTCCATCGCGACATAATGATAGGGTTCGGGACATGGGAGTTTGATCCGATGGAACTAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E241841" ref_strand="+" ref_description="SGN-E241841 [cLED-27-O23]">
      <seq>gactttagctcttgatatagaggaattagctgatcaattggaattaggatctaagttttatgttatcggattttctatgggtggacaagctgtttggggccttctcaagtatattcctcacagattggctggagcaattcttctaacacccgtaactaactactggtggggtagttttcctgcaaacttgactaaacaagcgtactacgaacagcttgtgcaggatcaatggacgcttcgcatcgcacactattttccatggctgacttactggtggaacactcaaaaattatttccttcttccagcgttgcaacgggcagcgaggatattcttttagaacaagacagagttcttatgcctatctttgattcatatcagagtaaatatcgggacttggtaagacagcaaggggagtacgagtccatccatcgcgacctaatgataggtttcgggacatgggaatttgatccgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="33561" stop="31819"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33261" g_stop="33139" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.791" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32813" g_stop="32546" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="391" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32202" g_stop="32119" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="475" r_length="84" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E241841" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33261" e_stop="33139"/>
          <exon e_start="32813" e_stop="32546"/>
          <exon e_start="32202" e_stop="32119"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAGGTACTTTTAGTTTGCTCGCACCTCGACTATTTTAACTATGTACCTGTTACGTCCCACCAGCATAAATACGAGTACCTTTGATCTACCAATTCTTAAGCAGATGAGAAGAAGTCATTTTATGAATTGGCTTGATTGTTCCTCTTAGTATAAATTGAATCTTCAGTGAAAGTAGTTTAGTTCTTTGGATTTAACTTATAGACACTGACGATGCTAATGACTTTTACATTATCAGTTTACGTTAATTTGTCGTAGTTATCTTTTAGGTGACCTTCTCGGGTGCACATAGGTTTCCATCTTAACTAGTGACATTTGAAATGTGTAACAGATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGGGTGAGCACTCGTCTGTCTTCTTCACATATCCACATTTCATTTTGCAAATTTGGATAAACACCATGCTTCAACATCAATCCTTATATACGTAAATGAAAAAATAAGGACAAATAGTGTTACAAGTACGTTTTCTGCATCATTATCGACTGTAGGATAGAGTCATAACTTGTTATAACTAGTTAAATTACGCTAATAGAATTGTGTATAACTTAATTCCACAATCATATGTGTTGATTTTGATTAGCAAATTGTTTGAGTTAACTCTCCTAAATCTTGTGCTTGCATTATGAATACTAGCAACTAACAAGTACTTAACTCTGAGTTCTGTTCTGTTTTTCTTTAGGACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATG</genome_strand>
        <mrna_strand>GACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAG.....................................................................................................................................................................................................................................................................................................................................ATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGG.......................................................................................................................................................................................................................................................................................................................................................GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E710338" ref_strand="+" ref_description="SGN-E710338 [FA55AE05]">
      <seq>gcactaggccaccaccgaagatttgtggttcatcaaatatctcccatcagaaagaaaatggtgttcctagagaccaagcaaaacacaaatttgttttcatccatggctttgattgtgtcagacatgatgttgctttgctcacaactacttctcctgagcttatgcaaagtttgggaatatatattgtgtcaattgatagacctggttatggtgaaagtgatcctcatccaaaaagaacgccaaagactttagctcttgatatagaggaattagctgatcaattggaattaggatctaagttttatgttatcggattttctatgggtggacaagctgtttggggccttctcaagtatattcctcacagattggctggagcaattcttctaacacccgtaactaactactggtggggtagttttcctgcaaacttgactaaacaagcgtactacgaacagcttgtgcaggatcaatggacgcttcgcatcgcacactattttccatggctgacttactggtggaacactcaaaaattatttccttcttccaacgttgcaacgggcagcgaggatattcttttaaaacaagacagagttcttatgcctatctttgattcatatcacagcaaatatcgggacttggtaccacagcaaggggagtacgagtccatcccatcgcgacctaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="34479" stop="31851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34088" g_stop="33988" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="155" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33987" i_stop="33351" i_length="637">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33350" g_stop="33139" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="367" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.791" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32813" g_stop="32546" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="635" r_length="268" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32202" g_stop="32151" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="636" r_stop="688" r_length="53" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E710338" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.920" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34088" e_stop="33988"/>
          <exon e_start="33350" e_stop="33139"/>
          <exon e_start="32813" e_stop="32546"/>
          <exon e_start="32202" e_stop="32151"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGGTGTTCCTAGAGACCAAGCAAAACACAAATTTGTTTTCATCCATGGCTTTGATTGTGTCAGACATGATGTTGCTTTGCTCACAACTACTTCTCCTGTATGTATGTTTCATCTTTACTTGTTCATCCCCCCGCCCCCTCCCTTAGAATAGCTTTTAGTTTCTCCTTCGTTTTGTTTGTGTCCGATATTTGTTTTGAGGTCCGACTAATTTGAATTTGTGTTGGGAGGTTTCATTTTTAAGGCTTCTCCGACCAATGATTACTCTATTTTCAGAGTTCAAATCCCAAGATTGTCGTGATTCTAGTCAAGGATTAAGAGATACTTTCGAAGGTTGTTTTAGTGTTCATCTTGGTTTCTCATCCGGAGTCTGGAATCTGTTGGAGCCCAATTATTATGTATTCGTGTCCAGAAGTCCTAGTTTTAAGGCTCCTGACCCAATGCAACTACATTTTCAGAGCTTGAACCTTAGATCTGTGGTTAACGATTGAGTGGTACTTATAAGTGTTGTTTTTAGTATTCTTTTTAGTTTCCCACCTGGTGTCCAACATCCGATTTGGAGCATGACTAATCCGAATTCACATTGGGAAGTCCCACTTTGAGGGTTAAGGCTCCTGACAACAGCGACTTTATTTCTAGAGCTCGGATCTGGAACTTGATTAAGGATGGAGGGACACTTACCGTCTGCTCGAGTATATTTGTGGTTGCAATTAATGAAATTTTCTTTGTGGTTGCAGGAGCTTATGCAAAGTTTGGGAATATATATTGTGTCAATTGATAGACCTGGTTATGGTGAAAGTGATCCTCATCCAAAAAGAACGCCAAAGACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAGGTACTTTTAGTTTGCTCGCACCTCGACTATTTTAACTATGTACCTGTTACGTCCCACCAGCATAAATACGAGTACCTTTGATCTACCAATTCTTAAGCAGATGAGAAGAAGTCATTTTATGAATTGGCTTGATTGTTCCTCTTAGTATAAATTGAATCTTCAGTGAAAGTAGTTTAGTTCTTTGGATTTAACTTATAGACACTGACGATGCTAATGACTTTTACATTATCAGTTTACGTTAATTTGTCGTAGTTATCTTTTAGGTGACCTTCTCGGGTGCACATAGGTTTCCATCTTAACTAGTGACATTTGAAATGTGTAACAGATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGGGTGAGCACTCGTCTGTCTTCTTCACATATCCACATTTCATTTTGCAAATTTGGATAAACACCATGCTTCAACATCAATCCTTATATACGTAAATGAAAAAATAAGGACAAATAGTGTTACAAGTACGTTTTCTGCATCATTATCGACTGTAGGATAGAGTCATAACTTGTTATAACTAGTTAAATTACGCTAATAGAATTGTGTATAACTTAATTCCACAATCATATGTGTTGATTTTGATTAGCAAATTGTTTGAGTTAACTCTCCTAAATCTTGTGCTTGCATTATGAATACTAGCAACTAACAAGTACTTAACTCTGAGTTCTGTTCTGTTTTTCTTTAGGACTTGGTAAGACAGCAAGGGGAGTACGAGTCCAT-CCATCGCGACCTAATGA</genome_strand>
        <mrna_strand>AAAATGGTGTTCCTAGAGACCAAGCAAAACACAAATTTGTTTTCATCCATGGCTTTGATTGTGTCAGACATGATGTTGCTTTGCTCACAACTACTTCTCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTTATGCAAAGTTTGGGAATATATATTGTGTCAATTGATAGACCTGGTTATGGTGAAAGTGATCCTCATCCAAAAAGAACGCCAAAGACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAG.....................................................................................................................................................................................................................................................................................................................................ATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAACGTTGCAACGGGCAGCGAGGATATTCTTTTAAAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCACAGCAAATATCGG.......................................................................................................................................................................................................................................................................................................................................................GACTTGGTACCACAGCAAGGGGAGTACGAGTCCATCCCATCGCGACCTAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E245339" ref_strand="+" ref_description="SGN-E245339 [cLEF-44-H22]">
      <seq>tttctgatgggagatatttggcatataaagaaaatggtgtgcctagagaccaagcaaaacacaaatttgttttcatccatggctttgattgtgtcagacatgatgttgctttgctcacaactacttctcctgtatgagcttatgcaaagtttgggaatatatattgtgtcaattgatagacctggttatggtgaaagtgatcctcatccaaaaagaacgccaaagactttagctcttgatatagaggaattagctgatcaattggaattaggatctaagttttatgttatcggattttctatgggtggacaagctgtttggggccttctcaagtatattcctcacagattggctggagcaattcttctaacacccgtaactaactactggtggggtagttttcctgcaaacttgactaaacaagcgtactacgaacagcttgtgcaggatcaatggacgcttcgcatcgcacactattttccatggctgacttactggtggaacactcaaaaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="34418" stop="32345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34118" g_stop="33984" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33983" i_stop="33351" i_length="633">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33350" g_stop="33139" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="347" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.791" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32813" g_stop="32645" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="516" r_length="169" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E245339" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245339" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34118" e_stop="33984"/>
          <exon e_start="33350" e_stop="33139"/>
          <exon e_start="32813" e_stop="32645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTGATGGGAGATATTTGGCATATAAAGAAAATGGTGTTCCTAGAGACCAAGCAAAACACAAATTTGTTTTCATCCATGGCTTTGATTGTGTCAGACATGATGTTGCTTTGCTCACAACTACTTCTCCTGTATGTATGTTTCATCTTTACTTGTTCATCCCCCCGCCCCCTCCCTTAGAATAGCTTTTAGTTTCTCCTTCGTTTTGTTTGTGTCCGATATTTGTTTTGAGGTCCGACTAATTTGAATTTGTGTTGGGAGGTTTCATTTTTAAGGCTTCTCCGACCAATGATTACTCTATTTTCAGAGTTCAAATCCCAAGATTGTCGTGATTCTAGTCAAGGATTAAGAGATACTTTCGAAGGTTGTTTTAGTGTTCATCTTGGTTTCTCATCCGGAGTCTGGAATCTGTTGGAGCCCAATTATTATGTATTCGTGTCCAGAAGTCCTAGTTTTAAGGCTCCTGACCCAATGCAACTACATTTTCAGAGCTTGAACCTTAGATCTGTGGTTAACGATTGAGTGGTACTTATAAGTGTTGTTTTTAGTATTCTTTTTAGTTTCCCACCTGGTGTCCAACATCCGATTTGGAGCATGACTAATCCGAATTCACATTGGGAAGTCCCACTTTGAGGGTTAAGGCTCCTGACAACAGCGACTTTATTTCTAGAGCTCGGATCTGGAACTTGATTAAGGATGGAGGGACACTTACCGTCTGCTCGAGTATATTTGTGGTTGCAATTAATGAAATTTTCTTTGTGGTTGCAGGAGCTTATGCAAAGTTTGGGAATATATATTGTGTCAATTGATAGACCTGGTTATGGTGAAAGTGATCCTCATCCAAAAAGAACGCCAAAGACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAGGTACTTTTAGTTTGCTCGCACCTCGACTATTTTAACTATGTACCTGTTACGTCCCACCAGCATAAATACGAGTACCTTTGATCTACCAATTCTTAAGCAGATGAGAAGAAGTCATTTTATGAATTGGCTTGATTGTTCCTCTTAGTATAAATTGAATCTTCAGTGAAAGTAGTTTAGTTCTTTGGATTTAACTTATAGACACTGACGATGCTAATGACTTTTACATTATCAGTTTACGTTAATTTGTCGTAGTTATCTTTTAGGTGACCTTCTCGGGTGCACATAGGTTTCCATCTTAACTAGTGACATTTGAAATGTGTAACAGATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTA</genome_strand>
        <mrna_strand>TTTCTGATGGGAGATATTTGGCATATAAAGAAAATGGTGTGCCTAGAGACCAAGCAAAACACAAATTTGTTTTCATCCATGGCTTTGATTGTGTCAGACATGATGTTGCTTTGCTCACAACTACTTCTCCTGTAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTTATGCAAAGTTTGGGAATATATATTGTGTCAATTGATAGACCTGGTTATGGTGAAAGTGATCCTCATCCAAAAAGAACGCCAAAGACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAG.....................................................................................................................................................................................................................................................................................................................................ATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E271028" ref_strand="+" ref_description="SGN-E271028 [cLEM-22-P17]">
      <seq>ctgattggggccttctcaagtatattcctcacagattggctggagcaattcttctaacaccactgactaactactggtggggtagtttcccagcaaacttgactaaacaagcgtactacgaacagctcgtgcaagatcaatggacgttgcggattgcacactacttaccataggctgacttactggtggaacactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="33472" stop="32353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33172" g_stop="33139" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.791" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32813" g_stop="32653" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="196" r_length="162" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E271028" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>195</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33172" e_stop="33139"/>
          <exon e_start="32813" e_stop="32653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTTGGGGCCTTCTCAAGTATATTCCTCACAGGTACTTTTAGTTTGCTCGCACCTCGACTATTTTAACTATGTACCTGTTACGTCCCACCAGCATAAATACGAGTACCTTTGATCTACCAATTCTTAAGCAGATGAGAAGAAGTCATTTTATGAATTGGCTTGATTGTTCCTCTTAGTATAAATTGAATCTTCAGTGAAAGTAGTTTAGTTCTTTGGATTTAACTTATAGACACTGACGATGCTAATGACTTTTACATTATCAGTTTACGTTAATTTGTCGTAGTTATCTTTTAGGTGACCTTCTCGGGTGCACATAGGTTTCCATCTTAACTAGTGACATTTGAAATGTGTAACAGATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCAT-GGCTGACTTACTGGTGGAACACTC</genome_strand>
        <mrna_strand>CTGATTGGGGCCTTCTCAAGTATATTCCTCACAG.....................................................................................................................................................................................................................................................................................................................................ATTGGCTGGAGCAATTCTTCTAACACCACTGACTAACTACTGGTGGGGTAGTTTCCCAGCAAACTTGACTAAACAAGCGTACTACGAACAGCTCGTGCAAGATCAATGGACGTTGCGGATTGCACACTACTTACCATAGGCTGACTTACTGGTGGAACACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E342952" ref_strand="+" ref_description="SGN-E342952 [cTOF-11-O2]">
      <seq>gcaagttgaagaggagaagggtggaattaagacagatgcgttcttcaaaacaagtgtacctgatgtatatgctgtgggtgatgttgccacttttcctttgaaaatgtacaatgagattagaagagttgaacatgttgatcattctcgcaaatctgctgagcaggctgtcaaggcaatatttgccagtgagcaagggaagtctgtcgatgaatatgactaccttccatacttctattcccgcgccttcgatttgtcttggcaattctacggtgataatgtgggtgaaacagtgctctttggggacgctgatcccaactctgcaactcacaagtttggacaatactggatcaaagatggaaagatcgttggtgcattcctcgagagtgggtcacctgaagagaacaaggcaattgctaaggttgcaaaggttcaaccccctgctaccttggatcaattggcacaggagggcatcagttttgcctcaaagatctaatttttatacctactttggattttaaaacagctctttgaagtttctgccttatttacaatgttgtaattgtttgacatttttcatggctgtttgattggttaaatatgatgtttcttcatctgagtttagttgcagaagatcaccctgttaggcatatatattcataccttaaagtgtgacatctctgtaataatgaatgttagagcaatgtggtttgtgaaatatgagcatctatttacttggattagcccaaatttttggttatgcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="34528" stop="36314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34830" g_stop="34970" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="172" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34971" i_stop="35420" i_length="450">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35421" g_stop="35994" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="742" r_length="570" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="761" polyA_stop="775"/>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E342952" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34830" e_stop="34970"/>
          <exon e_start="35421" e_stop="35994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGATGCGTTCTTCAAAACAAGTGTACCTGATGTATATGCTGTGGGTGATGTTGCCACTTTTCCTTTGAAAATGTACAATGAGATTAGAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAGGTATGTGACAGCTCCCTGACGCTATCCAGAGTTGATATGGAAGTTTTATATGAAAGTTTTATATCGTCATCCTGCTTATAATATGTTGATTCTTTACTTGGTCAACCGTGATTGCTCTCATGAGTCATGATATAAACTGGATATTTGAACCACACTACACATGCAGATTAGGGTGTTCAAATACTGAAAACTATCTCCATTCTACATGCCTACTGATTGTTTATTGTCCTGGCATGAGTACAAATTTGTAACAATGCAACGTTAAATTACACTCACACAGCACACAGGTTATCTTTTGCTTCCACTGTGTGACTTATTAGAATAGCTTTCTGCAGTTTGCTAGTGTCTTTCTACTCTGTCAATCAACTCGGTCAAATGTAGTTACAAATTCTCATACTCCACATCTTCTTATGAAGTAAAAATGTTAATGTTACATTGTTGCTGGTGCAGGCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGATTAGC</genome_strand>
        <mrna_strand>ACAGATGCGTTCTTCAAAACAAGTGTACCTGATGTATATGCTGTGGGTGATGTTGCCACTTTTCCTTTGAAAATGTACAATGAGATTAGAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGG-TTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTTAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGT-AATAATGAATGTTAG-AGCAATGTGGTTTGTG-AAATATGAGCATCTATTTACTTGGATTAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E349065" ref_strand="+" ref_description="SGN-E349065 [cTOS-2-E14]">
      <seq>tgagattagaagagttgaacatgttgatcattctcgcaaatctgctgagcaggctgtcaaggcaatatttgccagtgagcaagggaagtctgtcgatgaatatgactaccttccatacttctattcccgcgccttcgatttgtcttggcaattctacggtgataatgtgggtgaaacagtgctctttggggacgctgatcccaactctgcaactcacaagtttggacaatactggatcaaagatggaaagatcgttggtgcattcctcgagagtgggtcacctgaagagaacaaggcaattgctaaggttgcaaaggttcaaccccctgctaccttggatcaattggcacaggagggcatcagttttgcctcaaagatctaatttttatacctactttggattttaaaacagctctttgaagtttctgccttatttacaatgttgtaattgtttgacatttttcatggctgtttgattggtttaaatatgatgtttcttcatctgagtttagttgcagaagatcaccctgtaaggcatatatattcataccttaaagtgtgacatctctgtaaataatgaatgttagaagcaatgtggtttgtgaaaatatgagcatctatttacttggattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="34610" stop="36292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34910" g_stop="34970" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34971" i_stop="35420" i_length="450">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35421" g_stop="36001" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="642" r_length="581" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E349065" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E349065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34910" e_stop="34970"/>
          <exon e_start="35421" e_stop="36001"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGATTAGAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAGGTATGTGACAGCTCCCTGACGCTATCCAGAGTTGATATGGAAGTTTTATATGAAAGTTTTATATCGTCATCCTGCTTATAATATGTTGATTCTTTACTTGGTCAACCGTGATTGCTCTCATGAGTCATGATATAAACTGGATATTTGAACCACACTACACATGCAGATTAGGGTGTTCAAATACTGAAAACTATCTCCATTCTACATGCCTACTGATTGTTTATTGTCCTGGCATGAGTACAAATTTGTAACAATGCAACGTTAAATTACACTCACACAGCACACAGGTTATCTTTTGCTTCCACTGTGTGACTTATTAGAATAGCTTTCTGCAGTTTGCTAGTGTCTTTCTACTCTGTCAATCAACTCGGTCAAATGTAGTTACAAATTCTCATACTCCACATCTTCTTATGAAGTAAAAATGTTAATGTTACATTGTTGCTGGTGCAGGCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGATTAGCGCACACT</genome_strand>
        <mrna_strand>TGAGATTAGAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E351689" ref_strand="+" ref_description="SGN-E351689 [cTOS-8-E14]">
      <seq>tgagattagaagagttgaacatgttgatcattctcgcaaatctgctgagcaggctgtcaaggcaatatttgccagtgagcaagggaagtctgtcgatgaatatgactaccttccatacttctattcccgcgccttcgatttgtcttggcaattctacggtgataatgtgggtgaaacagtgctctttggggacgctgatcccaactctgcaactcacaagtttggacaatactggatcaaagatggaaagatcgttggtgcattcctcgagagtgggtcacctgaagagaacaaggcaattgctaaggttgcaaaggttcaaccccctgctaccttggatcaattggcacaggagggcatcagttttgcctcaaagatctaatttttatacctactttggattttaaaacagctctttgaagtttctgccttatttacaatgttgtaattgtttgacatttttcatggctgtttgattggtttaaatatgatgtttcttcatctgagtttagttgcagaagatcaccctgtaaggcatatatattcataccttaaagtgtgacatctctgtaaataatgaatgttagaagcaatgtggtttgtgaaaatatgagcatctatttacttggattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="34610" stop="36292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34910" g_stop="34970" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34971" i_stop="35420" i_length="450">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35421" g_stop="36001" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="642" r_length="581" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E351689" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34910" e_stop="34970"/>
          <exon e_start="35421" e_stop="36001"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGATTAGAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAGGTATGTGACAGCTCCCTGACGCTATCCAGAGTTGATATGGAAGTTTTATATGAAAGTTTTATATCGTCATCCTGCTTATAATATGTTGATTCTTTACTTGGTCAACCGTGATTGCTCTCATGAGTCATGATATAAACTGGATATTTGAACCACACTACACATGCAGATTAGGGTGTTCAAATACTGAAAACTATCTCCATTCTACATGCCTACTGATTGTTTATTGTCCTGGCATGAGTACAAATTTGTAACAATGCAACGTTAAATTACACTCACACAGCACACAGGTTATCTTTTGCTTCCACTGTGTGACTTATTAGAATAGCTTTCTGCAGTTTGCTAGTGTCTTTCTACTCTGTCAATCAACTCGGTCAAATGTAGTTACAAATTCTCATACTCCACATCTTCTTATGAAGTAAAAATGTTAATGTTACATTGTTGCTGGTGCAGGCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGATTAGCGCACACT</genome_strand>
        <mrna_strand>TGAGATTAGAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E203775" ref_strand="-" ref_description="SGN-E203775 [cLEC-17-F13]">
      <seq>gaagagttgaacatgttgatcattctcgcaaatctgctgagcaggctgtcaaggcaatatttgccagtgagcaagggaagtctgtcgatgaatatgactactttccatacttctattcccgcgccttcgatttgtcttggcaattctacggtgataatgtgggtgaaacagtgctctttggggacgctgatcccaactctgcaactcacaagtttggacaatactggatcaaagatggaaagatcgttggtgcattcctcgagagtgggtcacctgaagagaacaaggcaattgctaaggttgcaaaggttcaaccccctgctaccttggatcaattggcacaggagggcatcagttttgcctcaaagatctaatttttatacctactttggattttaaaacagctctttgaagtttctgccttatttacaatgttgtaattgtttgacatttttcatggctgtttgattggtttaaatatgatgtttcttcatctgagtttagttgcagaagatcaccctgtaaggcatatatattcataccttaaagtgtgacatctctgtaaataatgaatgttagaagcaatgtggtttgtgaaaatatgagcatctatttacttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="34618" stop="36289"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34918" g_stop="34970" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34971" i_stop="35420" i_length="450">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35421" g_stop="35989" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="622" r_length="569" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E203775" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203775" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="34918" e_stop="34970"/>
          <exon e_start="35421" e_stop="35989"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAGGTATGTGACAGCTCCCTGACGCTATCCAGAGTTGATATGGAAGTTTTATATGAAAGTTTTATATCGTCATCCTGCTTATAATATGTTGATTCTTTACTTGGTCAACCGTGATTGCTCTCATGAGTCATGATATAAACTGGATATTTGAACCACACTACACATGCAGATTAGGGTGTTCAAATACTGAAAACTATCTCCATTCTACATGCCTACTGATTGTTTATTGTCCTGGCATGAGTACAAATTTGTAACAATGCAACGTTAAATTACACTCACACAGCACACAGGTTATCTTTTGCTTCCACTGTGTGACTTATTAGAATAGCTTTCTGCAGTTTGCTAGTGTCTTTCTACTCTGTCAATCAACTCGGTCAAATGTAGTTACAAATTCTCATACTCCACATCTTCTTATGAAGTAAAAATGTTAATGTTACATTGTTGCTGGTGCAGGCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGA</genome_strand>
        <mrna_strand>GAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACTTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E353551" ref_strand="+" ref_description="SGN-E353551 [cTOS-15-F9]">
      <seq>aagagttgaacatgttgatcattctcgcaaatctgctgagcaggctgtcaaggcaatatttgccagtgagcaagggaagtctgtcgatgaatatgactaccttccatacttctattcccgcgccttcgatttgtcttggcaattctacggtgataatgtgggtgaaacagtgctctttggggacgctgatcccaactctgcaactcacaagtttggacaatactggatcaaagatggaaagatcgttggtgcattcctcgagagtgggtcacctgaagagaacaaggcaattgctaaggttgcaaaggttcaaccccctgctaccttggatcaattggcacaggagggcatcagttttgcctcaaagatctaatttttatacctactttggattttaaaacagctctttgaagtttctgccttatttacaatgttgtaattgtttgacatttttcatggctgtttgattggntttaatatgatgtttcttcatctgagtttagttgcagaagatcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="34619" stop="36186"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34919" g_stop="34970" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34971" i_stop="35420" i_length="450">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35421" g_stop="35886" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="518" r_length="466" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E353551" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34919" e_stop="34970"/>
          <exon e_start="35421" e_stop="35886"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAGGTATGTGACAGCTCCCTGACGCTATCCAGAGTTGATATGGAAGTTTTATATGAAAGTTTTATATCGTCATCCTGCTTATAATATGTTGATTCTTTACTTGGTCAACCGTGATTGCTCTCATGAGTCATGATATAAACTGGATATTTGAACCACACTACACATGCAGATTAGGGTGTTCAAATACTGAAAACTATCTCCATTCTACATGCCTACTGATTGTTTATTGTCCTGGCATGAGTACAAATTTGTAACAATGCAACGTTAAATTACACTCACACAGCACACAGGTTATCTTTTGCTTCCACTGTGTGACTTATTAGAATAGCTTTCTGCAGTTTGCTAGTGTCTTTCTACTCTGTCAATCAACTCGGTCAAATGTAGTTACAAATTCTCATACTCCACATCTTCTTATGAAGTAAAAATGTTAATGTTACATTGTTGCTGGTGCAGGCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACC</genome_strand>
        <mrna_strand>AAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGNTTTAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E714287" ref_strand="+" ref_description="SGN-E714287 [FB11AB03]">
      <seq>attctcgcaaatctgctgagcaggctgtcaaggcaatatttgccagtgagcaagggaagtctgtcgatgaatatgactaccttccatacttctattcccgcgccttcgatttgtcttggcaattctacggtgataatgtgggtgaaacagtgctctttggggacgctgatcccaactctgcaactcacaagtttggacaatactggatcaaagatggaaagatcgttggtgcattcctcgagagtgggtcacctgaagagaacaaggcaattgctaaggttgcaaaggttcaaccccctgctaccttggatcaattggcacaggagggcatcagttttgcctcaaagatctaatttttatacctactttggattttaaaacagctctttgaagtttctgccttatttacaatgttgtaattgtttgacatttttcatggctgtttgattggtttaaatatgatgtttcttcatctgagtttagttgcagaagatcaccctgtaaggcatatatattcataccttaaagtgtgacatctctgtaaataatgaatgttagaagcaatgtggtttgtganaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="34639" stop="36269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34939" g_stop="34970" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34971" i_stop="35420" i_length="450">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35421" g_stop="35966" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="578" r_length="546" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="579" polyA_stop="598"/>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E714287" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E714287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34939" e_stop="34970"/>
          <exon e_start="35421" e_stop="35966"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTCGCAAATCTGCTGAGCAGGCTGTCAAGGTATGTGACAGCTCCCTGACGCTATCCAGAGTTGATATGGAAGTTTTATATGAAAGTTTTATATCGTCATCCTGCTTATAATATGTTGATTCTTTACTTGGTCAACCGTGATTGCTCTCATGAGTCATGATATAAACTGGATATTTGAACCACACTACACATGCAGATTAGGGTGTTCAAATACTGAAAACTATCTCCATTCTACATGCCTACTGATTGTTTATTGTCCTGGCATGAGTACAAATTTGTAACAATGCAACGTTAAATTACACTCACACAGCACACAGGTTATCTTTTGCTTCCACTGTGTGACTTATTAGAATAGCTTTCTGCAGTTTGCTAGTGTCTTTCTACTCTGTCAATCAACTCGGTCAAATGTAGTTACAAATTCTCATACTCCACATCTTCTTATGAAGTAAAAATGTTAATGTTACATTGTTGCTGGTGCAGGCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAA</genome_strand>
        <mrna_strand>ATTCTCGCAAATCTGCTGAGCAGGCTGTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGANA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E715030" ref_strand="+" ref_description="SGN-E715030 [FB13AE07]">
      <seq>attctcgcaaatctgctgagcaggctgtcaaggcaatatttgccagtgagcaagggaagtctgtcgatgaatatgactaccttccatacttctattcccgcgccttcgatttgtcttggcaattctacggtgataatgtgggtgaaacagtgctctttggggacgctgatcccaactctgcaactcacaagtttggacaatactggatcaaagatggaaagatcgttggtgcattcctcgagagtgggtcacctgaagagaacaaggcaattgctaaggttgcaaaggttcaaccccctgctaccttggatcaattggcacaggagggcatcagttttgcctcaaagatctaatttttatacctactttggattttaaaacagctctttgaagtttctgccttatttacaatgttgtaattgtttgacatttttcatggctgtttgattggtttaaatatgatgtttcttcatctgagtttagttgcagaagatcaccctgtaaggcatatatattcataccttaaagtgtgacatctctgtaaataatgaatgttagaagcaatgtggtttgtgaaannaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="34639" stop="36266"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34939" g_stop="34970" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34971" i_stop="35420" i_length="450">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35421" g_stop="35966" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="578" r_length="546" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="581" polyA_stop="597"/>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E715030" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34939" e_stop="34970"/>
          <exon e_start="35421" e_stop="35966"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTCGCAAATCTGCTGAGCAGGCTGTCAAGGTATGTGACAGCTCCCTGACGCTATCCAGAGTTGATATGGAAGTTTTATATGAAAGTTTTATATCGTCATCCTGCTTATAATATGTTGATTCTTTACTTGGTCAACCGTGATTGCTCTCATGAGTCATGATATAAACTGGATATTTGAACCACACTACACATGCAGATTAGGGTGTTCAAATACTGAAAACTATCTCCATTCTACATGCCTACTGATTGTTTATTGTCCTGGCATGAGTACAAATTTGTAACAATGCAACGTTAAATTACACTCACACAGCACACAGGTTATCTTTTGCTTCCACTGTGTGACTTATTAGAATAGCTTTCTGCAGTTTGCTAGTGTCTTTCTACTCTGTCAATCAACTCGGTCAAATGTAGTTACAAATTCTCATACTCCACATCTTCTTATGAAGTAAAAATGTTAATGTTACATTGTTGCTGGTGCAGGCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAA</genome_strand>
        <mrna_strand>ATTCTCGCAAATCTGCTGAGCAGGCTGTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E358850" ref_strand="+" ref_description="SGN-E358850 [cLHT-24-L20]">
      <seq>agactagtctcgagtttttttttttttttggttttttttttaaatgctcatattttcacaaatcatttcttctaacattcattatttacagagatgtcacactttaagggatgaatatatatcccttacagggggatcttctgcaactaaactcagatgaagaaacatcatatttaaaccaatcaaacagccatgaaaaatgtcaaacaattacaacattgtaaataaggcagaaacttcaaagagctgttttaaaatctaaaataggtataaaattagatctttgaggcaaaactgatgccctcctgtgccaattgatccaaggtagcagggggttgaacctttgcaaccttagcaattgccttattctcttcaggtgacccactctcgaggaatgcaccaacgatctttccatctttgatccagtattgtccaaacttgtgagttgcagagttgggatcagcgtccccaaagagcactgtttcacccacattatcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="52641" stop="35218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36305" g_stop="36267" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="0.590"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36266" i_stop="35984" i_length="283">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35983" g_stop="35518" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="499" r_length="463" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E358850" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E358850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36305" e_stop="36267"/>
          <exon e_start="35983" e_stop="35518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATTAGACCGAAGACATTGTTTGCTTGGTTTGATTTCTGCTAGTGAGGATAAACCCAAGACTGTATCGTTGCCAGAGCTCGTTTGTTGTTAGGGTAAATCTATGCAGTTTCTGGCAATTGAAACTTCAACTTCATGTTGAGATACAACCAACTTTTCTTGCCTTTAAAATTAGGACAATGTATAGAAGGTACTATTATTAGGAAAAGTAACAATAGTTTCATATCGACCTTTAAGATGTTTTAAATGCATGTCATTGTGCATCTATAAAAGCATGTCATTAAGGATAAAATGTGCATAACCAAAGTGTGCGCTAATCCAAGTAAATAGATGCTCATATTTTCACAAACCACATTGCTTCTAACATTCATTATTTACAGAGATGTCACACTTTAAGGTATGAATATATATGCCTTACAGGGTGATCTTCTGCAACTAAACTCAGATGAAGAAACATCATATTTAAACCAATCAAACAGCCATGAAAAATGTCAAACAATTACAACATTGTAAATAAGGCAGAAACTTCAAAGAGCTGTTTTAAAATCCAAAGTAGGTATAAAAATTAGATCTTTGAGGCAAAACTGATGCCCTCCTGTGCCAATTGATCCAAGGTAGCAGGGGGTTGAACCTTTGCAACCTTAGCAATTGCCTTGTTCTCTTCAGGTGACCCACTCTCGAGGAATGCACCAACGATCTTTCCATCTTTGATCCAGTATTGTCCAAACTTGTGAGTTGCAGAGTTGGGATCAGCGTCCCCAAAGAGCACTGTTTCACCCACATTATCAC</genome_strand>
        <mrna_strand>AGACTAG-TC-TCGAGTTTTTTT-TTTTTTTTGGTTTTT...........................................................................................................................................................................................................................................................................................TTTTTAAATGCTCATATTTTCACAAA--TCATTTCTTCTAACATTCATTATTTACAGAGATGTCACACTTTAAGGGATGAATATATATCCCTTACAGGGGGATCTTCTGCAACTAAACTCAGATGAAGAAACATCATATTTAAACCAATCAAACAGCCATGAAAAATGTCAAACAATTACAACATTGTAAATAAGGCAGAAACTTCAAAGAGCTGTTTTAAAATCTAAAATAGGTAT-AAAATTAGATCTTTGAGGCAAAACTGATGCCCTCCTGTGCCAATTGATCCAAGGTAGCAGGGGGTTGAACCTTTGCAACCTTAGCAATTGCCTTATTCTCTTCAGGTGACCCACTCTCGAGGAATGCACCAACGATCTTTCCATCTTTGATCCAGTATTGTCCAAACTTGTGAGTTGCAGAGTTGGGATCAGCGTCCCCAAAGAGCACTGTTTCACCCACATTATCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E282461" ref_strand="+" ref_description="SGN-E282461 [cLER-18-K11]">
      <seq>ttttttttttcacaaaccacattgcttctaacattcattatttacagagatgtcacactttaaggtatgaatatatatgccttacagggtgatcttctgcaactaaactcagatgaagaaacatcatatttaaaccaatcaaacagccatgaaaaatgtcaaacaattacaacattgtaaataaggcagaaacttcaaagagctgttttaaaatccaaagtaggtataaaaattagatctttgaggcaaaactgatgccctcctgtgccaattgatccaaggtagcagggggttgaacctttgcaaccttagcaattgccttgttctcttcaggtgacccactctcgaggaatgcaccaacgatctttccatctttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="36269" stop="35295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35973" g_stop="35595" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E282461" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282461" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35973" e_stop="35595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATATTTTCACAAACCACATTGCTTCTAACATTCATTATTTACAGAGATGTCACACTTTAAGGTATGAATATATATGCCTTACAGGGTGATCTTCTGCAACTAAACTCAGATGAAGAAACATCATATTTAAACCAATCAAACAGCCATGAAAAATGTCAAACAATTACAACATTGTAAATAAGGCAGAAACTTCAAAGAGCTGTTTTAAAATCCAAAGTAGGTATAAAAATTAGATCTTTGAGGCAAAACTGATGCCCTCCTGTGCCAATTGATCCAAGGTAGCAGGGGGTTGAACCTTTGCAACCTTAGCAATTGCCTTGTTCTCTTCAGGTGACCCACTCTCGAGGAATGCACCAACGATCTTTCCATCTTTGAT</genome_strand>
        <mrna_strand>TTTTTTTTTTCACAAACCACATTGCTTCTAACATTCATTATTTACAGAGATGTCACACTTTAAGGTATGAATATATATGCCTTACAGGGTGATCTTCTGCAACTAAACTCAGATGAAGAAACATCATATTTAAACCAATCAAACAGCCATGAAAAATGTCAAACAATTACAACATTGTAAATAAGGCAGAAACTTCAAAGAGCTGTTTTAAAATCCAAAGTAGGTATAAAAATTAGATCTTTGAGGCAAAACTGATGCCCTCCTGTGCCAATTGATCCAAGGTAGCAGGGGGTTGAACCTTTGCAACCTTAGCAATTGCCTTGTTCTCTTCAGGTGACCCACTCTCGAGGAATGCACCAACGATCTTTCCATCTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E282347" ref_strand="+" ref_description="SGN-E282347 [cLER-18-O9]">
      <seq>caaaccacattgcttctaacattcattatttacagagatgtcacactttaaggtatgaatatatatgccttacagggtgatcttctgcaactaaactcagatgaagaaacatcatatttaaaccaatcaaacagccatgaaaaatgtcaaacaattacaacattgtaaataaggcagaaacttcaaagagctgttttaaaatccaaagtaggtataaaaattagatctttgaggcaaaactgatgccctcctgtgccaattgatccaaggtagcagggggttgaacctttgcaaccttagcaattgccttgttctcttcaggtgacccactctcgaggaatgcaccaacgatctttccatctttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="36261" stop="35295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35961" g_stop="35595" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E282347" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>367</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35961" e_stop="35595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACCACATTGCTTCTAACATTCATTATTTACAGAGATGTCACACTTTAAGGTATGAATATATATGCCTTACAGGGTGATCTTCTGCAACTAAACTCAGATGAAGAAACATCATATTTAAACCAATCAAACAGCCATGAAAAATGTCAAACAATTACAACATTGTAAATAAGGCAGAAACTTCAAAGAGCTGTTTTAAAATCCAAAGTAGGTATAAAAATTAGATCTTTGAGGCAAAACTGATGCCCTCCTGTGCCAATTGATCCAAGGTAGCAGGGGGTTGAACCTTTGCAACCTTAGCAATTGCCTTGTTCTCTTCAGGTGACCCACTCTCGAGGAATGCACCAACGATCTTTCCATCTTTGAT</genome_strand>
        <mrna_strand>CAAACCACATTGCTTCTAACATTCATTATTTACAGAGATGTCACACTTTAAGGTATGAATATATATGCCTTACAGGGTGATCTTCTGCAACTAAACTCAGATGAAGAAACATCATATTTAAACCAATCAAACAGCCATGAAAAATGTCAAACAATTACAACATTGTAAATAAGGCAGAAACTTCAAAGAGCTGTTTTAAAATCCAAAGTAGGTATAAAAATTAGATCTTTGAGGCAAAACTGATGCCCTCCTGTGCCAATTGATCCAAGGTAGCAGGGGGTTGAACCTTTGCAACCTTAGCAATTGCCTTGTTCTCTTCAGGTGACCCACTCTCGAGGAATGCACCAACGATCTTTCCATCTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E223284" ref_strand="+" ref_description="SGN-E223284 [cLEL-14-M20](-)">
      <seq>ggcacgaggctctttgaagtttctgccttatttacaatgttgtaattgtttgacatttttcatggctgtttgattggtttaaatatgatgtttcttcatctgagtttagttgcagaagatcaccctgtaaggcatatatattcataccttaaagtgtgacatctctgtaaataatgaatgttagaagcaatgtggtttgtgaaaatatgagcatctatttacttggattagcgcacactttggttaaaaaaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="35468" stop="36308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35772" g_stop="36017" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="255" r_length="246" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E223284" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>246</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E223284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35772" e_stop="36017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGATTAGCGCACACTTTGGTTATGCACATTT</genome_strand>
        <mrna_strand>CTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGATTAGCGCACACTTTGGTTAAAAAAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E223629" ref_strand="+" ref_description="SGN-E223629 [cLEL-14-M20](-)">
      <seq>ggcacgaggctctttgaagtttctgccttatttacaatgttgtaattgtttgacatttttcatggctgtttgattggtttaaatatgatgtttcttcatctgagtttagttgcagaagatcaccctgtaaggcatatatattcataccttaaagtgtgacatctctgtaaataatgaatgttagaagcaatgtggtttgtgaaaatatgagcatctatttacttggattagcgaacactttggttaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="35468" stop="36308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35772" g_stop="36013" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="251" r_length="242" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E223629" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>242</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E223629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35772" e_stop="36013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGATTAGCGCACACTTTGGTTATGCAC</genome_strand>
        <mrna_strand>CTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGATTAGCGAACACTTTGGTTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E703480" ref_strand="+" ref_description="SGN-E703480 [FA21CE05]">
      <seq>gctgtttcacataacgagcgacttgaagttgatcgcatcccagcccttgtagaattgtgcattcaggctggtgtggacttacctgagtacccaacccgaagaaggaagttccccatttaccgggttgctggaaaactcatagattttgagaagaggtttcccaaggatgatttgttcgggaaggacgtagaaacttttaggtctagggaaactattaagaagcacatcggagatggaaattatttgaatttaccctacgatgacataaaaggattcgctatgcgaggaatggaagcttgggagactatgcgtactggagccatacagctcatgaaaacttatggcgttcaaacatgtggatattgtcctgagttgcaagtcgggccaaaggggcatagggttaggcaatgtcaagccttcaagcaccagatgagggatggacaacatgcttggcaagaggcaacaatagatgatcttctctccactgtatatgtttggcatgtccaaaacccgcatgctggtgacgttttggttgattctatgaaaaggtattacggaaagttacctgcagtcgttgaactgtttagtcaagttggagcacaggtcggagatgattactatcacatgatgagagatgatgttgtagttcctggacgagatgaagaaaagttagttgtataaagctctgaaatgctgccaacatattggcagagtagaatcaacattagaccgaagacattgtttgcttggtttgatttctgctagtgaggataaacccaagactgtatcgttgccagagctcgtttgttgttagggtaaatctatgcagtttctggcaattgaaacttcaacttcatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="37632" stop="35866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37332" g_stop="37062" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37061" i_stop="36756" i_length="306">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36755" g_stop="36166" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="861" r_length="590" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E703480" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>861</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703480" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37332" e_stop="37062"/>
          <exon e_start="36755" e_stop="36166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTTTCACATAACGAGCGACTTGAAGTTGATCGCATCCCAGCCCTTGTAGAATTGTGCATTCAGGCTGGTGTGGACTTACCTGAGTACCCAACCCGAAGAAGGAAGTTCCCCATTTACCGGGTTGCTGGAAAACTCATAGATTTTGAGAAGAGGTTTCCCAAGGATGATTTGTTCGGGAAGGACGTAGAAACTTTTAGGTCTAGGGAAACTATTAAGAAGCACATCGGAGATGGAAATTATTTGAATTTACCCTACGATGACATAAAAGGTTTGTCTTTATGTTACTACAATGTTTTCACTTATAATTATTAGTCATTTTTCAATGTGCATTTTCCTATTAAAATACATCAATTTCCTCTCTAGAGCTTCAAGCTATGTTGCTCAGAGTTTCCAAAATTGTTGCCGCACCTGTGTCGACCTCTCCAAAATGCACTACTTTTACAGTATCCGACACGGACCCGTCGACATTTTTGAAGAGTCTAAGCATCATAGACTTAAAAGTATGTTAAAGAATTATTACTTATGGTATGACGAAATTTCTAGTTTGATTTTCTACTACTTATCACTTCTCCAGGATTCGCTATGCGAGGAATGGAAGCTTGGGAGACTATGCGTACTGGAGCCATACAGCTCATGAAAACTTATGGCGTTCAAACATGTGGATATTGTCCTGAGTTGCAAGTCGGGCCAAAGGGGCATAGGGTTAGGCAATGTCAAGCCTTCAAGCACCAGATGAGGGATGGACAACATGCTTGGCAAGAGGCAACAATAGATGATCTTCTCTCCACTGTATATGTTTGGCATGTCCAAAACCCGCATGCTGGTGACGTTTTGGTTGATTCTATGAAAAGGTATTATGGAAAGTTACCTGCAGTCGTTGAACTGTTTAGTCAAGTTGGAGCACAGGTCGGAGATGATTACTATCACATGATGAGAGATGATGTTGTAGTTCCTGGACGAGATGAAGAAAAGTTAGTTGTATAAAGCTCTGAAATGCTGCCAACATATTGGCAGAGTAGAATCAACATTAGACCGAAGACATTGTTTGCTTGGTTTGATTTCTGCTAGTGAGGATAAACCCAAGACTGTATCGTTGCCAGAGCTCGTTTGTTGTTAGGGTAAATCTATGCAGTTTCTGGCAATTGAAACTTCAACTTCATGTTG</genome_strand>
        <mrna_strand>GCTGTTTCACATAACGAGCGACTTGAAGTTGATCGCATCCCAGCCCTTGTAGAATTGTGCATTCAGGCTGGTGTGGACTTACCTGAGTACCCAACCCGAAGAAGGAAGTTCCCCATTTACCGGGTTGCTGGAAAACTCATAGATTTTGAGAAGAGGTTTCCCAAGGATGATTTGTTCGGGAAGGACGTAGAAACTTTTAGGTCTAGGGAAACTATTAAGAAGCACATCGGAGATGGAAATTATTTGAATTTACCCTACGATGACATAAAAG..................................................................................................................................................................................................................................................................................................................GATTCGCTATGCGAGGAATGGAAGCTTGGGAGACTATGCGTACTGGAGCCATACAGCTCATGAAAACTTATGGCGTTCAAACATGTGGATATTGTCCTGAGTTGCAAGTCGGGCCAAAGGGGCATAGGGTTAGGCAATGTCAAGCCTTCAAGCACCAGATGAGGGATGGACAACATGCTTGGCAAGAGGCAACAATAGATGATCTTCTCTCCACTGTATATGTTTGGCATGTCCAAAACCCGCATGCTGGTGACGTTTTGGTTGATTCTATGAAAAGGTATTACGGAAAGTTACCTGCAGTCGTTGAACTGTTTAGTCAAGTTGGAGCACAGGTCGGAGATGATTACTATCACATGATGAGAGATGATGTTGTAGTTCCTGGACGAGATGAAGAAAAGTTAGTTGTATAAAGCTCTGAAATGCTGCCAACATATTGGCAGAGTAGAATCAACATTAGACCGAAGACATTGTTTGCTTGGTTTGATTTCTGCTAGTGAGGATAAACCCAAGACTGTATCGTTGCCAGAGCTCGTTTGTTGTTAGGGTAAATCTATGCAGTTTCTGGCAATTGAAACTTCAACTTCATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E732176" ref_strand="+" ref_description="SGN-E732176 [LB01BH09]">
      <seq>ttctcccttcaacaacactccctcttggctagctccaatactatagtttgtggagactagccaaaccacacacacaaaaaaatcttccttctacaatttgcttcaaattcattcaatatcaacaataacaaattcaacgacacgttcattatgacgaacgaacgtgaaaatccatcatttttttctatacatccctcaagacgccccgaccctaacaatgacaaggccgaatcaacaaggcctaataatttactagtcaagaaaaataacgtcacgattaaacgtgatcaagaaaaattcaacaatacagaaattacgtcagacatgatcaacgtgcacgtgggacatgttggcgcgcataacgagggcggaccgatgaggacagatgatagtggacgtgaaagattgaagagacatagaattgaagtggcaggacatgtatggataccagaaatttggggacaagaagaattactcaaagattggattgattgtagtgcatttgattcaaaattgaataataataataatataatgtcagctagggctgctttggttgaagaaagaagaagaaataattcatcttgcagattgagaattgaaaatagctattgaaattatgcaccaaaaaaaaaaaaaaaaaggagtttaaattttaatttaattttttgggtttttttcctcctccccttaaatggaacggttttataattttaatcaaaaaaatggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="53281" stop="51951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52981" g_stop="52250" g_length="732"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="732" r_length="732" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E732176" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732176" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52981" e_stop="52250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCCCTTCAACAACACTCCCTCTTGGCTAGCTCCAATACTATAGTTTGTGGAGACTAGCCAAACCACACACACAAAAAAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAACAAGGCCTAATAATTTACTAGTCAAGAAAAATAACGTCACGATTAAACGTGATCAAGAAAAATTCAACAATACAGAAATTACGTCAGACATGATCAACGTGCACGTGGGACATGTTGGCGCGCATAACGAGGGCGGACCGATGAGGACAGATGATAGTGGACGTGAAAGATTGAAGAGACATAGAATTGAAGTGGCAGGACATGTATGGATACCAGAAATTTGGGGACAAGAAGAATTACTCAAAGATTGGATTGATTGTAGTGCATTTGATTCAAAATTGAATAATAATAATAATATAATGTCAGCTAGGGCTGCTTTGGTTGAAGAAAGAAGAAGAAATAATTCATCTTGCAGATTGAGAATTGAAAATAGCTATTGAAATTATGCACCAAAAAAAAAAAAAAAGATGAGTTTTAATTTTTATTTTATTTTTTTGGTTTTTTTTCTTCTTCTCTTTAATTGAACTGTTTTATTATTTTTATCATAATAATTGTGT</genome_strand>
        <mrna_strand>TTCTCCCTTCAACAACACTCCCTCTTGGCTAGCTCCAATACTATAGTTTGTGGAGACTAGCCAAACCACACACACAAAAAAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAACAAGGCCTAATAATTTACTAGTCAAGAAAAATAACGTCACGATTAAACGTGATCAAGAAAAATTCAACAATACAGAAATTACGTCAGACATGATCAACGTGCACGTGGGACATGTTGGCGCGCATAACGAGGGCGGACCGATGAGGACAGATGATAGTGGACGTGAAAGATTGAAGAGACATAGAATTGAAGTGGCAGGACATGTATGGATACCAGAAATTTGGGGACAAGAAGAATTACTCAAAGATTGGATTGATTGTAGTGCATTTGATTCAAAATTGAATAATAATAATAATATAATGTCAGCTAGGGCTGCTTTGGTTGAAGAAAGAAGAAGAAATAATTCATCTTGCAGATTGAGAATTGAAAATAGCTATTGAAATTATGCACCAAAAAAAAAAAAAAAAAGGAGTTTAAATTTTAATTTAATTTTTTGGGTTTTTTTCCTCCTCCCCTTAAATGGAACGGTTTTATAATTTTAATCAAAAAAATGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E719084" ref_strand="+" ref_description="SGN-E719084 [FC06CG11]">
      <seq>aatcggccgaattgccctcttggctagctccaatactatagtttgtggagactagccaaaccacacacacaaaaaaatcttccttctacaatttgcttcaaattcattcaatatcaacaataacaaattcaacgacacgttcattatgacgaacgaacgtgaaaatccatcatttttttctatacatccctcaagacgccccgaccctaacaatgacaaggccgaatcaacaaggcctaataatttactagtcaagaaaaataacgtcacgattaaacgtgatcaagaaaaattcaacaatacagaaattacgtcagacatgatcaacgtgcacgtgggacatgttggcgcgcataacgagggcggaccgatgaggacagatgatagtggacgtgaaagattgaagagacatagaattgaagtggcaggacatgtatggataccagaaatttggggacaagaagaattactcaaagattggattgattgtagtgcatttgattcaaaattgaataataataataatataatgtcagctagggctgctttggttgaagaaagaagaagaaataattcatcttgcagattgagaattgaaaatagctattgaaattatgcaccaaaaaaaaaaaaaaaaagaagtttaaattttaatttaattttttgggtttttttcctcctccccttaaatggaacggtttaataatttttaccaaaaaaatggggggttcccgggttnnnaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="53269" stop="51939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52963" g_stop="52254" g_length="710"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="723" r_length="710" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="742" polyA_stop="768"/>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E719084" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="0.924" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52963" e_stop="52254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTCTTGGCTAGCTCCAATACTATAGTTTGTGGAGACTAGCCAAACCACACACACAAAAAAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAACAAGGCCTAATAATTTACTAGTCAAGAAAAATAACGTCACGATTAAACGTGATCAAGAAAAATTCAACAATACAGAAATTACGTCAGACATGATCAACGTGCACGTGGGACATGTTGGCGCGCATAACGAGGGCGGACCGATGAGGACAGATGATAGTGGACGTGAAAGATTGAAGAGACATAGAATTGAAGTGGCAGGACATGTATGGATACCAGAAATTTGGGGACAAGAAGAATTACTCAAAGATTGGATTGATTGTAGTGCATTTGATTCAAAATTGAATAATAATAATAATATAATGTCAGCTAGGGCTGCTTTGGTTGAAGAAAGAAGAAGAAATAATTCATCTTGCAGATTGAGAATTGAAAATAGCTATTGAAATTATGCACCAAAAAAAAAAAAAAAGATGAGTTTTAATTTTTATTTTATTTTTTTGGTTTTTTTTCTTCTTCTCTTTAATTGAACTGTTTTATTATTTTTATCATAATAATT</genome_strand>
        <mrna_strand>GCCCTCTTGGCTAGCTCCAATACTATAGTTTGTGGAGACTAGCCAAACCACACACACAAAAAAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAACAAGGCCTAATAATTTACTAGTCAAGAAAAATAACGTCACGATTAAACGTGATCAAGAAAAATTCAACAATACAGAAATTACGTCAGACATGATCAACGTGCACGTGGGACATGTTGGCGCGCATAACGAGGGCGGACCGATGAGGACAGATGATAGTGGACGTGAAAGATTGAAGAGACATAGAATTGAAGTGGCAGGACATGTATGGATACCAGAAATTTGGGGACAAGAAGAATTACTCAAAGATTGGATTGATTGTAGTGCATTTGATTCAAAATTGAATAATAATAATAATATAATGTCAGCTAGGGCTGCTTTGGTTGAAGAAAGAAGAAGAAATAATTCATCTTGCAGATTGAGAATTGAAAATAGCTATTGAAATTATGCACCAAAAAAAAAAAAAAAAAGAAGTTTAAATTTTAATTTAATTTTTTGGGTTTTTTTCCTCCTCCCCTTAAATGGAACGGTTTAATAATTTTTACCAAAAAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E326369" ref_strand="+" ref_description="SGN-E326369 [cTOC-14-C3]">
      <seq>ttctcccttcaacaacactccctcttggctagctccaatactataggttgtggagactagccaaaccacacacacaaaaaaatcttccttctacaatttgcttcaaattcattcaatatcaacaataacaaattcaacgacacgttcattatgacgaacgaacgtgaaaatccatcatttttttctatacatccctcaagacgccccgaccctaacaatgacaaggccgaatcaacaaggcctaataatttactagtcaagaaaaataacgtcacgattaaacgtgatcaagaaaaattcaacaatacagaaattacgtcagacatgatcaacgtgcacgtgggacatgttggcgcgcataacgagggcggaccgatgaggacagatgatagtggacgtgaaagattgaagagacatagaattgaagtggcaggacatgtatggataccagaaatttggggacaagaagaattactcaaagattggattgattgtagtgcatttgattcaaaattgaataataataataatataatgtcagctanggctgcttttgttgaagaaagaagaagaaatnattcatcttgcagattgagaattgaaaatagctattgaaattatgcacccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="53281" stop="52042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52981" g_stop="52343" g_length="639"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="639" r_length="639" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E326369" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326369" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52981" e_stop="52343"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCCCTTCAACAACACTCCCTCTTGGCTAGCTCCAATACTATAGTTTGTGGAGACTAGCCAAACCACACACACAAAAAAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAACAAGGCCTAATAATTTACTAGTCAAGAAAAATAACGTCACGATTAAACGTGATCAAGAAAAATTCAACAATACAGAAATTACGTCAGACATGATCAACGTGCACGTGGGACATGTTGGCGCGCATAACGAGGGCGGACCGATGAGGACAGATGATAGTGGACGTGAAAGATTGAAGAGACATAGAATTGAAGTGGCAGGACATGTATGGATACCAGAAATTTGGGGACAAGAAGAATTACTCAAAGATTGGATTGATTGTAGTGCATTTGATTCAAAATTGAATAATAATAATAATATAATGTCAGCTAGGGCTGCTTTGGTTGAAGAAAGAAGAAGAAATAATTCATCTTGCAGATTGAGAATTGAAAATAGCTATTGAAATTATGCACCAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>TTCTCCCTTCAACAACACTCCCTCTTGGCTAGCTCCAATACTATAGGTTGTGGAGACTAGCCAAACCACACACACAAAAAAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAACAAGGCCTAATAATTTACTAGTCAAGAAAAATAACGTCACGATTAAACGTGATCAAGAAAAATTCAACAATACAGAAATTACGTCAGACATGATCAACGTGCACGTGGGACATGTTGGCGCGCATAACGAGGGCGGACCGATGAGGACAGATGATAGTGGACGTGAAAGATTGAAGAGACATAGAATTGAAGTGGCAGGACATGTATGGATACCAGAAATTTGGGGACAAGAAGAATTACTCAAAGATTGGATTGATTGTAGTGCATTTGATTCAAAATTGAATAATAATAATAATATAATGTCAGCTANGGCTGCTTTTGTTGAAGAAAGAAGAAGAAATNATTCATCTTGCAGATTGAGAATTGAAAATAGCTATTGAAATTATGCACCCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E281962" ref_strand="+" ref_description="SGN-E281962 [cLES-2-A6]">
      <seq>tcttacactatagttttagagacaccaaaataaaaccatcatttctcccttcaacaacactccctcttggctagctccaatactatagtttgtggagactagccaaaccacacacacaaaaaaatcttccttctacaatttgcttcaaattcattcaatatcaacaataacaaattcaacgacacgttcattatgacgaacgaacgtgaaaatccatcatttttttctatacatccctcaagacgccccgaccctaacaatgacaaggccgaatcaacaaggcctaataatttactagtcaagaaaaataacgtcacgattaaacgtgatcaagaaaaattcaacaatacagaaattacgtcagacatgatcaacgtgcacgtgggacatgttggcgcgcataacgagggcggaccgatgaggacagatgatagtggacgtgaaagattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="53323" stop="52273"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53023" g_stop="52573" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="451" r_length="451" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E281962" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E281962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53023" e_stop="52573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTACACTATAGTTTTAGAGACACCAAAATAAAACCATCATTTCTCCCTTCAACAACACTCCCTCTTGGCTAGCTCCAATACTATAGTTTGTGGAGACTAGCCAAACCACACACACAAAAAAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAACAAGGCCTAATAATTTACTAGTCAAGAAAAATAACGTCACGATTAAACGTGATCAAGAAAAATTCAACAATACAGAAATTACGTCAGACATGATCAACGTGCACGTGGGACATGTTGGCGCGCATAACGAGGGCGGACCGATGAGGACAGATGATAGTGGACGTGAAAGATTGA</genome_strand>
        <mrna_strand>TCTTACACTATAGTTTTAGAGACACCAAAATAAAACCATCATTTCTCCCTTCAACAACACTCCCTCTTGGCTAGCTCCAATACTATAGTTTGTGGAGACTAGCCAAACCACACACACAAAAAAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAACAAGGCCTAATAATTTACTAGTCAAGAAAAATAACGTCACGATTAAACGTGATCAAGAAAAATTCAACAATACAGAAATTACGTCAGACATGATCAACGTGCACGTGGGACATGTTGGCGCGCATAACGAGGGCGGACCGATGAGGACAGATGATAGTGGACGTGAAAGATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E286320" ref_strand="+" ref_description="SGN-E286320 [cLES-11-I11]">
      <seq>aaatcttccttctacaatttgcttcaaattcattcaatatcaacaataacaaattcaacgacacgttcattatgacgaacgaacgtgaaaatccatcatttttttctatacatccctcaagacgccccgaccctaacaatgacaaggccgaatcaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="53202" stop="52446"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52902" g_stop="52746" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E286320" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>157</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E286320" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52902" e_stop="52746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAAC</genome_strand>
        <mrna_strand>AAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E366159" ref_strand="+" ref_description="SGN-E366159 [cLPT-1-A15](-)">
      <seq>atttttggggcggtgatagacccatcgataagtggacaggtcagcataacgctgattgccactggtttcaagcgccaagaagaaagtgatatgaggcccctccagggaaaccaactagcacagggagatgcttcacttggaactaacagacgacctgcgtcctttgtggaaggtggttcagtggaaattcctgagttcctcaggaaaaaagggcgattgcgctatccaagagcttaagttagtccttcattttcctgcatgtatagtacttccctttttcttcttgttctccaacatctctatctttcaaagtgatacatatgcgttatacatacaggatcttggttatgcatcgagtccatttcgtttttctttataataatgtagaattgcctatacatgttagtttgctagtgagtgtaataagctggagatactatcaaaggtagacaattaggagcacaatcagtctggtttcacctatgatctgtaaagtgttgctgtaaagttgatatccgttgacgaacttgtgcacatatatgtgatttaggttcagttttgaacttgttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="59355" stop="57477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59055" g_stop="59017" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59016" i_stop="58444" i_length="573">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58443" g_stop="58378" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="105" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58377" i_stop="58274" i_length="104">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58273" g_stop="57770" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="578" r_length="473" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E366159" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.054" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E366159" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59055" e_stop="59017"/>
          <exon e_start="58443" e_stop="58378"/>
          <exon e_start="58273" e_stop="57770"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTGGGGCGGTGATAGACCCATCAATAAGTGGACAGGTATGTTCGTATATCTCAATAGGTTATTCCTTCGTTGACTTGATTCTTTGCAGATCTTGACATGTACCGAAGCGAAAAATTATTGACTCCAAGGCTTCTTATTAGATAGTTGAAAGATTGAACAGTTATGTCATAAATTGGGAAACTGATCTTTAATTTAATCAGAGATGAGAAAGAATAAATAGTTGACTAATGGTAAAAAATATACCGTAAGTATCACCTTTTTTGCGAGTTTTATATCTGAACTATCACCAGCTATTTATAAAAACACAAGGTAGGGTAAGGTTGTGTATGCCAATCCTCCCCAGACCCCACTTGTGAGATTGCACCGTGTGTGTTGTCTTTGTATCTAGTTAGGATTAAGGCCCCCCCCACAAACACACACAGAAAAAAAAAAAAAAGAAAAAAAAAGTTTGAGGCTTGTATGTTAGTGTAGGGATAAAATGAGACTTGGAAAACTTGTTTACATCTCTGATTTGTCTCAATGGTGTTGAGGCGTAGAAGATCGATTGAACTCCTGTCGAATTTACGTTTTGCTGCATGGTCAATCTCATCATTATCCATGTGATGCAGGTCAGCATAACGCTGATTGCCACTGGTTTCAAGCGCCAAGAAGAAAGTGATATGAGGCCCCTCCAGGTATTCCTCTCTTCCATCCTATCCCTTCACATCTACATTACATGTGAAAATCTTTGGTTTTGCCGATCATTTGTGATACACATTCCACGGTGTTCAACTAACAGGGAAACCAACTAGCACAGGGAGATGCTTCACTTGGAACTAACAGACGACCTGCGTCCTTTCTGGAAGGTGGTTCAGTGGAAATTCCTGAGTTCCTCAGGAAAAAAGGGCGATTGCGCTATCCAAGAGCTTAAGTTAGTCCTTCATTTTCCTGCATGTATAGTACTTCCCTTTTTCTTCTTGTTCTCCAACATCTCTATCTTTCAAAGTGATACATATGCGTTATACATACAGGATCTTGGTTATGCATCGACTATCAAGTTTATCTCATGGAAAAACCATTGTCCATCTCGTTTTTCTTTATAATAATGTAGAATTGCCTATACATGTTAGTTTGCTAGTGAGTGTAATAAAGCTGGAGATACTATCAAAGGTAGACAATTAGGATCACAATCAGTCTGGTTTCACCTATGATCTGTAAAGTGTTGCTGTAAAGTTGATATCCATTGACGAACTTGTGCACATATATGTGATTTAGGTTCAGTTTTGAACTTGTTCATCAGCTT</genome_strand>
        <mrna_strand>ATTTTTGGGGCGGTGATAGACCCATCGATAAGTGGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCATAACGCTGATTGCCACTGGTTTCAAGCGCCAAGAAGAAAGTGATATGAGGCCCCTCCAG........................................................................................................GGAAACCAACTAGCACAGGGAGATGCTTCACTTGGAACTAACAGACGACCTGCGTCCTTTGTGGAAGGTGGTTCAGTGGAAATTCCTGAGTTCCTCAGGAAAAAAGGGCGATTGCGCTATCCAAGAGCTTAAGTTAGTCCTTCATTTTCCTGCATGTATAGTACTTCCCTTTTTCTTCTTGTTCTCCAACATCTCTATCTTTCAAAGTGATACATATGCGTTATACATACAGGATCTTGGTTATGCATCG-------AG---------T-------CCA---T---T-TCGTTTTTCTTTATAATAATGTAGAATTGCCTATACATGTTAGTTTGCTAGTGAGTGTAAT-AAGCTGGAGATACTATCAAAGGTAGACAATTAGGAGCACAATCAGTCTGGTTTCACCTATGATCTGTAAAGTGTTGCTGTAAAGTTGATATCCGTTGACGAACTTGTGCACATATATGTGATTTAGGTTCAGTTTTGAACTTGTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E732350" ref_strand="+" ref_description="SGN-E732350 [LB01DG04]">
      <seq>ctctgctggatatcggtatagagagggctactggaattgtgtggaatataactggtggtagtgatctaacattatttgaggtaaatgctgcagcagaggttatatatgaccttgtggatccaagtgctaacctcatttttggggcggtgatagacccatcaataagtggacaggtcagcataacgctgattgccactggtttcaagcgccaagaagaaagtgatatgaggcccctccagggaaaccaactagcacagggagatgcttcacttggaactaacagacgacctgcgtcctttctggaaggtggttcagtggaaattcctgagttcctcaggaaaaaagggcgattgcgctatccaagagcttaagacaggatcttggttatgcatcgactatcaagtttatctcatggaaaaaccattgtccatctcgtttttctttataataatgtagaattgcctatacatgttagtttgttagtgagtgtaataaagctggagatactatcaaaggtagacaattaggatcacaatcagtctggtttcacctatgatctgtaaagtgttgctgtaaagttgatatccattgacgaacttgtgcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="61212" stop="57508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60912" g_stop="60833" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60832" i_stop="59110" i_length="1723">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59109" g_stop="59017" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="173" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59016" i_stop="58444" i_length="573">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58443" g_stop="58378" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="239" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="58377" i_stop="58274" i_length="104">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="58273" g_stop="58142" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="371" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="58141" i_stop="58047" i_length="95">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58046" g_stop="57803" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="615" r_length="244" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E732350" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60912" e_stop="60833"/>
          <exon e_start="59109" e_stop="59017"/>
          <exon e_start="58443" e_stop="58378"/>
          <exon e_start="58273" e_stop="58142"/>
          <exon e_start="58046" e_stop="57803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTGCTGGATATCGGTATAGAGAGGGCTACTGGAATTGTGTGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAGGTACCCGACTATTTTTTCTCTTGCTCTCTCTCTCTCTTCCGATACACTTACTAATCATCCTTAGTATGCACCTTTTGTTGACTGAAAAAGGCAGAAATGTATTCCATAACGTAGAAAAGATTTTGGCAGTAGAAGCCTTTTACTTTTTTCAATGTAGAGATTTTTCTTATTGAAGATGGCATATATGAATGTGTGAATTTCCTTGTATGATCGTCTCTTACAAAGAAAAATAAGAGAGAAACTTTATCTAATGGTGCATGAGGGTTGTGAAAAGCTATGTTGCTTAGACTCTTCAAAAATGTCGACGGGTGCGTGTCAGATCCTCCAAAAATAGTGTATTTTTGAAGGATCTGACACGGGTGCGGCAACATTTTTGGAGAGTCCAAGCAACTTAGGTGAAAAGATCAAACAACCTATGCTTCTGGTTCATCCTGTTTCCTTATCTGCTGTTTCTCAGCATTTATGTATGCCAATGTTGTCATTTTTAAAGTGCGCTTAAGCCTTGAAGCGTGGTACAAAACATGTTGAGCACTTTGCCTCGCTTTATGCACGCTTCAGTGTCGTCATCAAGGCATGCTTTTCCTTGCCAGTGAGAGTGAGTTTAGTCCTGAAGATGCGACACAATAAACAATTGATATTTCACGTTAGTTCTTGTCAATTTCTTTGTCCATATATTTATTATTCATGCTTGTGATTATTAATCTTGGACTACACATACATGTTTATATTTTTCTCCATAGCTCCATTTTTCAATAAATTCCACATTTGTGCTTAAAGCCTTAAAGGATCTTAGAGTTTTTTTACACTTTTCACTTATGATAAAACTGATGCACGCACACCAATTGTATGCTTGTTTTAGGCATCAAAATCATGTCAGACACAAATTCACTCATTAAAGCTATTGAACATGACCACACCTGCCAAGTTGGAGTTTCAAATTTCTCTAGATAATTTTTGGACCATTCGGCCCTTAAATTAGACTCTGAAAGGGATGCGAAGATTATAAGTTGTTATCCAATTTAATGAAGCTTTAAAACCAAAATATAATTTCAAGAAGTTAAAAATCTCATGCTGTATGCTATAAAAACAAGTTATAATGTTAAATTTGTAGACTTTTTGTGATTTTCACACCATTTGAACAAAACTTCAAAATGTAAGGAAGAAAATTGTTTTCATGCCTTCTTGGTAAAAATGTATATTGAAACTCTTTATCTTATGTTGGATAGAGACAATTGTATGCAAAGCAGTCTTTGTACCTTGAGTTGAAAATATGTTGTTAATAGTTAATGATTTTGGGGTCATATTTAAGCCTTGACCAGAATTATGTACAAATTTAAAATATCTATACTAGTTAATTGATGCTCTGATTTTTAAAGTTATGTCCAATCCTCTCGTGTACCCAACGTAGGTGTCCTTGGCCATGTTGCTTTTCTCCGCAATGACGATAACTGTTTTCTTAAATTTGGACCAGATATCAATTTATCATCATAACATCATTGTAGTGGTGATTTTGCCATATTCTCTCTATTATCAGTTTCAAAGCCTTCCTGACCTCCAAGTTTGCAGAAAGTTTATTGCTTTTTCTTAGTATAATAAAAAGCTTTCATCGTATGCATTTGTTATTTTATGTTTGTGAGCATCCCCGGATGATGCTAATTTCTGACTTATCTGATTAGCGAATTCAGCTTTCGTATCCTTGCATGTCCTCTTTGCACCTTTTTAGGTAAATGCTGCAGCAGAGGTTATATATGACCTTGTGGATCCAAGTGCTAACCTCATTTTTGGGGCGGTGATAGACCCATCAATAAGTGGACAGGTATGTTCGTATATCTCAATAGGTTATTCCTTCGTTGACTTGATTCTTTGCAGATCTTGACATGTACCGAAGCGAAAAATTATTGACTCCAAGGCTTCTTATTAGATAGTTGAAAGATTGAACAGTTATGTCATAAATTGGGAAACTGATCTTTAATTTAATCAGAGATGAGAAAGAATAAATAGTTGACTAATGGTAAAAAATATACCGTAAGTATCACCTTTTTTGCGAGTTTTATATCTGAACTATCACCAGCTATTTATAAAAACACAAGGTAGGGTAAGGTTGTGTATGCCAATCCTCCCCAGACCCCACTTGTGAGATTGCACCGTGTGTGTTGTCTTTGTATCTAGTTAGGATTAAGGCCCCCCCCACAAACACACACAGAAAAAAAAAAAAAAGAAAAAAAAAGTTTGAGGCTTGTATGTTAGTGTAGGGATAAAATGAGACTTGGAAAACTTGTTTACATCTCTGATTTGTCTCAATGGTGTTGAGGCGTAGAAGATCGATTGAACTCCTGTCGAATTTACGTTTTGCTGCATGGTCAATCTCATCATTATCCATGTGATGCAGGTCAGCATAACGCTGATTGCCACTGGTTTCAAGCGCCAAGAAGAAAGTGATATGAGGCCCCTCCAGGTATTCCTCTCTTCCATCCTATCCCTTCACATCTACATTACATGTGAAAATCTTTGGTTTTGCCGATCATTTGTGATACACATTCCACGGTGTTCAACTAACAGGGAAACCAACTAGCACAGGGAGATGCTTCACTTGGAACTAACAGACGACCTGCGTCCTTTCTGGAAGGTGGTTCAGTGGAAATTCCTGAGTTCCTCAGGAAAAAAGGGCGATTGCGCTATCCAAGAGCTTAAGTTAGTCCTTCATTTTCCTGCATGTATAGTACTTCCCTTTTTCTTCTTGTTCTCCAACATCTCTATCTTTCAAAGTGATACATATGCGTTATACATACAGGATCTTGGTTATGCATCGACTATCAAGTTTATCTCATGGAAAAACCATTGTCCATCTCGTTTTTCTTTATAATAATGTAGAATTGCCTATACATGTTAGTTTGCTAGTGAGTGTAATAAAGCTGGAGATACTATCAAAGGTAGACAATTAGGATCACAATCAGTCTGGTTTCACCTATGATCTGTAAAGTGTTGCTGTAAAGTTGATATCCATTGACGAACTTGTGCACATATATGTGA</genome_strand>
        <mrna_strand>CTCTGCTGGATATCGGTATAGAGAGGGCTACTGGAATTGTGTGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGCTGCAGCAGAGGTTATATATGACCTTGTGGATCCAAGTGCTAACCTCATTTTTGGGGCGGTGATAGACCCATCAATAAGTGGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCATAACGCTGATTGCCACTGGTTTCAAGCGCCAAGAAGAAAGTGATATGAGGCCCCTCCAG........................................................................................................GGAAACCAACTAGCACAGGGAGATGCTTCACTTGGAACTAACAGACGACCTGCGTCCTTTCTGGAAGGTGGTTCAGTGGAAATTCCTGAGTTCCTCAGGAAAAAAGGGCGATTGCGCTATCCAAGAGCTTAA...............................................................................................GACAGGATCTTGGTTATGCATCGACTATCAAGTTTATCTCATGGAAAAACCATTGTCCATCTCGTTTTTCTTTATAATAATGTAGAATTGCCTATACATGTTAGTTTGTTAGTGAGTGTAATAAAGCTGGAGATACTATCAAAGGTAGACAATTAGGATCACAATCAGTCTGGTTTCACCTATGATCTGTAAAGTGTTGCTGTAAAGTTGATATCCATTGACGAACTTGTGCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E707690" ref_strand="+" ref_description="SGN-E707690 [FA33CH03]">
      <seq>cgtttacggctcagacatggtttttgtgactgctggaatgggtggaggaacagggactggtgcggctcctataattgcaggaactgccaaatcaatgggtatcttaactgttggtatcgttacaacccccttttcttttgagggacgaagaagagcagttcaagcccaagaaggaattgcagctttgagagaaaatgttgatactctgattgtcattccaaatgacaaattattgacagctgtttctccatcaaccccagtaactgaagcttttaacctggctgatgatattcttcggcaaggagttcgtggtatttctgatataattacgattcctgggctagtaaatgtggattttgctgatgtgcgtgctattatggcaaatgctgggtcttctttaatgggaataggaactgctacaggaaagaccagagcgagagatgcagcattgaacgccattcaatctcctctgctggatatcggtatagagagggctactggaattgtgtggaatataactggtggtagtgatctaacattatttgaggtaaatgctgcagcagaggttatatatgaccttgtggatccaagtgctaacctcatttttggggcggtgatagacccatcaataagtggacaggtcagcataacgctgattgccactggtttcaagcgccaagaagaaagtgatatgaggcccctccagggaaaccaactagcacagggagatgcttcacttggaactaacagacgacctgcgtcctttctggaaggtggttcagtggaaattcctgagttcctcangaaaaaagggcgattgcgctatccaagagcttaagatcttggttatgcatcgactatcaagtttatctcatggaaaaaccattgtcatctcgtttttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="74977" stop="57675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74678" g_stop="74648" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74647" i_stop="72164" i_length="2484">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72163" g_stop="71864" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="331" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71863" i_stop="67050" i_length="4814">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67049" g_stop="66959" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="422" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66958" i_stop="60958" i_length="6001">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60957" g_stop="60833" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="547" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="60832" i_stop="59110" i_length="1723">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59109" g_stop="59017" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="640" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59016" i_stop="58444" i_length="573">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="58443" g_stop="58378" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="706" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="58377" i_stop="58274" i_length="104">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="58273" g_stop="58142" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="707" r_stop="838" r_length="132" r_score="0.992"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="58141" i_stop="58042" i_length="100">
            <donor d_prob="0.962" d_score="0.98"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="58041" g_stop="57975" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="839" r_stop="904" r_length="66" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E707690" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>905</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74678" e_stop="74648"/>
          <exon e_start="72163" e_stop="71864"/>
          <exon e_start="67049" e_stop="66959"/>
          <exon e_start="60957" e_stop="60833"/>
          <exon e_start="59109" e_stop="59017"/>
          <exon e_start="58443" e_stop="58378"/>
          <exon e_start="58273" e_stop="58142"/>
          <exon e_start="58041" e_stop="57975"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTACGGCTCAGACATGGTTTTTGTGACTGTAAGTTCAACCTATGTAATAACTTTAATTGGAAAAAGAAGTTTTGGGTTATTGAAATACACTTTATTCTTTCCTTTGTTTTGTTTCCCCTCTCATTTGTCAGAAACTTAGATTTCATATACTATTGTATAGAAACTTCTAATTCTTTCTTTTATAGTAAAACTAAGTATCTTCTTTTCGTGAGATACTACTTTTCTTAGTTGCTCGGACCCTTCTGTTTCGGTTCCGCACCCGTGTTGACACGACGTGGGTGTGGGATCTGTAGCGGATATGGTCAATTGATTTTGGGTACTTTGACCAAAATCGGAGAAATTTGGGACAGATGCAATGATTTCTATAATCAAACCAAAAGCTAAGGTGAAATGAAGAAAATGAAATACCTTGTATATCAAAATTTCTATGTCAATCTTTTTCGTTATTTCTCCTTTTGGGATTCTCCTCATGATCAATATTTCTCATCTGAAGACTTTGTATATTGACCACATAATATCTCATAATTTAGACTTATTACCCTATTGGACACCCACACTCGAATTTGAACAACTTAGCTTCTTTCTGTCCAATGTGCAGAGCAGCTGAAAGGTTTTTTCTAGTTATAGTACCAGATTGAATTGGTTAAATAAAATGCAGAATTCCTATGTTACATGTAACTTTAGGTAATGAAGTGCAGTTAAAGTATACTCACTTAAACCTGGCAACACTCTTCCTCCCACCCCGTCAAAATTTCTGAGCTCTTTCCCTGGCCCATAAAGATACTTGATACAGTAAAGGATGACTGTTGGAGGAAAGTACACTTAAATATGCTTTTTATAAACAAAGTTCAGTGTCTTTGGTGCTCATTAGAAAGATAGGTGTCACATTAGTCTGCTCCATCCCTTACAGCTTCTCTGATCTACCAACTTGAAATTGCTAATGTGCAACCTGAAGTGTGTCTGACTGCCTATTGCCTTCGTACTGCATAAGCTAAAGAGTTGAGGAGAATTAGTAGAGGAAGGAATCATTTAGTTTTTGATATAATATACGAGTATCTTAATAGCCATTAACGCTACCAAATAAATTTGAAGTATATATTAATGGCTATTAATTGGCATTTTATATGTTTCTATGATTATGATTCTTTCAATAGTTTTCTGAATATTTCTAACTTGTGACTTACATACTTTTTTTTTTAAGTTTCTAAAGATCTAATCATTCACAATTTTTTTTTTGGTAATAATCAATATTTAAATTAACACCGAAAATTATATGTTTTGCCTTTCGTACTTCAAACCGTACCTTCATTTCGGAAAGGAGGGTGAATTTTATATATAGTATTATTTTGTGAGGCAATGAGAAGATATTTCTAGTAACACAAGTTCCCAAATACGTGTGTACTTAGTATTCTCAGTTTAAAAGGGAAGGGTTGATAACAAGCAAAAAGGGGTCATTAGGCGAATCGGGAGCTGGAGAGAATAAATTTTGTTATTCTTAGCTTTTGAAATTGCAATCTGAAAATTGTTTCTGATTTATCTGATAGGACAAAAATAAACGATATTTCACAAGGATCTGGCGTATTGTATCATCCTTGCAAAGAGTTGATAAACTTTCAAAACAAAACATGCTTAATTGAATGAGAGGCTATGTTGGTACAAGCCTACAAGCGTAAACAGATGATAACTAAAATGGTGCTTGTAGCATGGCTATATCTTTGTATCAATCCAATACCAAGATATTTTAAACTTCAAATTATATCCGGAAGTCACAATTAAGTTTCTCTTAATGTGAAGAGACATTTTTTAGCATAATCATAAAAAAAGGATGTACCCAAGAATGTAATTTAAATTTATTCCTTGGCCTTTTGGTTCCAAGACTTTGTCAGATTGCATTAGCCTTATTAATCATCAACATGGTGCTATAAGCATCCAAGAAGGGCATCATATAGTACGCCATAAAAAAGTAAAACGTGTATACCTACCCTTCATCCGAGATGGTATCAGGCCGTTTCTTGGTGTAAGAGAGGAATCTGATCTCCCGTTCTTTTGATTTTCGTGCCATGCTTATCATTCAATCAGTTTTGTAAAAGGCGTGCTTGTTCAAAAACTGAAGCGAGACTCAAAATGTGTTGAGCGCTTTACCTCGTGTAATTTGCCCTTCAGTGTTGTCATCAAGGTTCCAAGGCATACTTTTTCTTGCCAGTGAGCCTCTTCTGAAGAGGCGACGTATGTTTCTCCCTTTGCGCCTTTTATCATTGAAGCCCAAACCTTATTTGTGCTTAAAGCTCCAATGGACCTTAGATCTTTTTTGTGCTTTTTGCTTTTGATATCAATCACTGCATTGAATACTAAGTATATATTTGCTTGAAAGTGCTGTAAAGCTAAATGTGGGATGATTACGTGTTATTATATGTAAATTAAAATTCCTCACATATCTTTAGAGTTTCCGGAGGCTATATTCTCTCACTTTTTGTTTCTTCCTCATATGTGGGCTCCAACATGTTATGTACAGGCTGGAATGGGTGGAGGAACAGGGACTGGTGCGGCTCCTATAATTGCAGGAACTGCCAAATCAATGGGTATCTTAACTGTTGGTATCGTTACAACCCCCTTTTCTTTTGAGGGACGAAGAAGAGCAGTTCAAGCCCAAGAAGGAATTGCAGCTTTGAGAGAAAATGTTGATACTCTGATTGTCATTCCAAATGACAAATTATTGACAGCTGTTTCTCCATCAACCCCAGTAACTGAAGCTTTTAACCTGGCTGATGATATTCTTCGGCAAGGAGTTCGTGGTATTTCTGATATAATTACGGTAAGTTTGTTAGTCACAGTCTTTTCTTTCATTTTCTGTTTTCTGCTTGCATAGTGCCTATGATCCTAAATAAGCATTTGCCTGATAATGCTTTAGGTCTAGGATCTTACTTTTATATGCATCACCAGGATGTGTTTTGTTTGTTCTATGCTTTGAAGGGAAATCTTAAACTATACACAGGTGAAGTATAAATCTCTAGATTTCCTCGCGCCTTAGTGTAAAACAAAGATGTATAACAACAAAAATAGCAACATACCCAGCGTAATACTACAAGTGGGATCTGGGGAGGGTGGTGTGTCCGCAACCTTACCCCTTACCTTGTGAAGATAGAGAGGGTGTTTCCGATAGACCCTCGGCTCATGATAAGGTAAAAATCGTCGTAGTAAATATAATCAATGCAATTGAAAGTTAGAGCTGATCTTACATGTGTTTAAGCAAGATAGGAGAAATAAAAACTAAGAATTGGTTATGCCACAACAAATTGCCAATCTAAGGATTTGTATCGAAATAGATTAGGTGTTAAATGATACCTTATGTATTTCGGATGGAATATATAAAAAAGCATATGCATTTTCTATGGAATAATTTAGTCATAGGTCTAAAGTGTATTAGGGAGCACAATATTAAGTTGTAATGTATGCACTATGTGAATTTAGTGTTATTGGGCATAAAATTGTGATATTGCTTAAAAGGAATCTTGAAAATAACACTGGAAGTGATGAACATGATGTCTAAAAAGGGAAGTAATTAGTTTAACAACTTTAATCAAGCTAATCAAGGTTAAAAAGTAACAATAATGTAACTAATTATAGGTGTAAAATCTTCTTATAAGGTTCTATTGCGCTTGAGTTGTCGAGATTTTTTTCTTGAATCACATTAGGAGAAAATGATGTGAATACAACTTTAAGGAGGTGTCATTCAATGAAGCCTGGCTCACAAATGATGGTTGCCCTCGTCTCTTTTTAGTGTTTTGACATTGATATTAGTAAGTGGAAAGGGCAATTCCTGCATACGACCCACCCATTTGTTAACACTCATTTGGTACGTTATCAATAATGTAAAATGATGGTACATTTTGTGAGAAACAAAAATTTGAGATGGAACCAAATTGATTATTCTGACAAGTTATTGAGGCTTAAATAGCTAAGTTTATATGACCTGTAAAGGAAAGGAAATCAAAACAAATAAATACCTAATTAAAATAGGAGTAAATCAAGCTACCTACTATATTTGCCCATATGCTATAAAATAGTTCTAGGACTCTTAACACCCCTTCAAGCTGATGCATACAAAATTACAAATTAGATGTACCAAGCTTGTTTCATATATAACTCATTTGGGACCGGCTAAGGACTTGGTGAATGTGCCTGCAAGCTGATGATCAGTAGGCCTACAATTTGTCATCCATGTCTCTTCAAGAATATCAAGTGCATATTTCCTATGTGAGATGACAATTCTTGATTTGGATTGAGCAACCTCAATGCCCACGAAGTACCTCAATCGACCAAGATCCTTAGTCTGAAAGTGCTGGAAAAAGTGATGTCTGAATTTGGTAATTCCCTCATCATCATTACCTGTGATAAATGTGCCATAAATGTACACTTTCAAAAACATGCACAAACCTGGAGCAAAGTGACAATAGAACACAAAATGATCAGCTTCACTTCGTACCATGCCAAACTCCTGAATAGCCATGCTAAACTTTTCAAACCATGCCCGAGGAGACTGTTTGAAGCCACAAAGTGCTCGTTGTAGTCTCCATACCATGTTACTAACCTCCCTCAGAGCAACAAAACCAGATGGTTGTTTTATATATACCTCATCTTCGAGATCTCCATGAAAAAAGACATTTTTGATATACAACTGGTAGAGAGGCCAATGACGAACATTAACCATGGATAAAAAGATATGGACTGAAGTAATCTTGGCCACATGAGGGAAGATATCATCATTGTCAAGACCAAAAGTCTGTGTATAAACCTTGACCATTAGTTGAGTTGTCTGTCCATTGGGGCCTACCTTCATTGTATATACCCAACAACAACCAATTGTGGATTTATCTAGAGGTAGAGGAATAAGCTCCCAAGTACCACTAGATTGTAAGGCAGGCATCTCCTCAATCATAGCTTCTTGTTGGTCTGGATGAGAAAGAGCTTCACGTGTAGTCTTAGGAATAGACACAAAGGATGGTGATGATACAAAGGCAATATGGGTTGTTGGCAAACAATGATAGCTCAAACAAGTATAAATAGGATTAGGGTTACGAGTAGAGCAATTACCTTTTCGAGTGTCAGCGGAAGAACTCAGTGTAGACAAGTCCTCAGTAGGCAAGGATTTTGATGAAGGGTTTGAATCATTTGGGCGCGGACGACGATGATAGGTCAATAGTGGTGGAGGTGTAGAGGAGGAAGATGGAGTTATAGAAGATGAGGCGGAAGGGGAGACTATGGTGGGATCTCCAAAAGATGGAATTGGTAGAACCTCATTAATGCCTAATTTTTCAACAGAGGATGTAAAGTAGGGCTTACCTTCAAAAAAAGTAACATCAACGGACATAAGGTATCGCTGGAGGTGAGGTGAGAAACATCGGTATCCCTTCTCTACTTCTGAAAAACCAAGAAAGACACATTTAAGAGCACAAGGAGCTAATTTTTCTTTTTCTGGAGTGAGTGTATGGACAAAGCATGTGCTCCCAAAGACACGTGGTGGAAGAGAAAATAAGGTTGACTGGGGAAATAAAATAGAGTGTGGAACCTGATTTTGAATAGCAAAGGAAGGCATACGGTTAATCAGATAACAAGAGGTGAGCACTACATCCCCCCAAGATCCAATGGAACACTTGCTTGTATGAGAAGAGTGCGTGCAGTCTTAACAATATGACTATTTTTTCTCTTTGCAACCCTATTTTGTTGTGTAGTATAAGGACAAAATGTTTGATGAAGTATTCCACTGGACGACAGAAATTGTTTAAATTGAGATGATAAATATTCACGCGCATTATCACTACGAAAAGTGCGAATAGAAACACCAAATTGAGTTCTTACTTCAGCACAAAAAGTTTGAAATATGAAAGCTAATTCAGAAAGATCTTTCATTAAGAACACCCAAGTGTACCTTGAGTAATCATCAACGAAATGCTTAAAATTCAATGTAGAACTAATTCTACTAGGACCCCAAATATCATAATGAACTAAATGAAAAGGAGACTCCGCATAATTATTAGGACTACGTGAAAAAAAAAATTGGGTGTGCTTCCCTAGTTGACAGGACTCACAATCTAACTTAGACAATTTAGACAAGTTAGGTATCATCTTTTGAAGTTTGGATAAACTAGGGTGTCCCAATCGTCTGTGGATTAAATCTGGAGAGTCAGATATTGAACAAACTGTAGTGGATTCATGAGGATTAAGATAATAAAGTCCATTTGACTCATGCCCTTCTCCAATTATCCTTCCTGTACAGAGGTCTTGTATAACAAAGAAGTCACTAAAGAATGAGACGAAACAATTTAAAGTCTGAGCCAAACGACTTATTGACATGAGGCTAAAGAGACAACCAGGGACAAGAAGAACATTATTCAGAGTCAAGGAAGGTAAGGGATTGGCTTGACCGATTCCGGTTGCCTTGGTTTGAGAACCATTAGCTATCCTAATTGTGGGAAGGGACTGAGAGTAAATAATATCAGACAATACAAATTTGTCACCAGTAACGTGGGTAGCAGCGCCTGAGTCCATGACCCAACAACCATGTGTGGTGGATTGTGAGATACTAGTGGCAGGATTAACAGGATTACCATTTTTGGCAGCTATTGATGAAGATGTCTGCTTACTCGCCTGGTACTGAAGAAAGTCATTGTATTCTATCTCAGACAAAGAGACCAGTCGATTGGTTGGATTACCAGTGGATTCAGTTTGAGGGTTGCTGGAGCCCATTAATTTAGTGCCAAACATGTTGAATCCAAGAGAAATGAAAACAGATCTATCAGTGTCCAAAAAAAAACGTGAATTTCGGAAAAGCACCTGAAATATAGATTGGAAAAACTGCTTGTTGTCTCGCTGGAAAATTAGATCTGACCGCTGGAAAGTGATTGAAATTAGTAAAGAAATTAAATGGGTAGGGTCGGAATGTTGCAACGAATCTACTGAAAAAGGAATCTGCTGGAGAAGTGGTCGGAAAACATCAAGCGAGGATTCTGATTGTAACGGTGGTACTGATATATGCAAAGTACCCCTGGAGAATGTCGAAATTGTGGACTATGGAGGTTTTGCTGGAAAAACGCTCAACAATTTTGTTCCCTTACTTTATTCATGTTTTCTCACTAAAGAAAACTTTAATAAAGAATAAGAGTTTGAGAGAGAATTCACCTTGATTATTCCCACTAGCTATTGGGAATCAAGCTACCTACTATATACACACACACACACACACACACACACACTATAGAATATTCCATGATTTTAACACACTTTATCAAAAAATAAAAGAAGTAAAATGATGGCTCATTTATCACCACAAGCTTTTGATACTTACCATAGGATCCTCTTACTACTTCCAAGGCAAATGAGGCTCATTAAGTACTCATATCACTCCCCTTAGTAGGATAACTCCATGTACTCTTCATGCGTTCATCTTTACTTAAATGCATCTGAACTTATGGACCTAAATGTAGCAAATACATGTCAATTTTCTATATTTGGCATATTCTTTCCTTCTACATAAAATGGATTTTCTTTCCAAAGTGCATTCTTCTGCTAATTTGGTGAATATCAAGGCTTGTATTTATTTATCCATGATATATCTGGCATGATTTACAGATTCCTGGGCTAGTAAATGTGGATTTTGCTGATGTGCGTGCTATTATGGCAAATGCTGGGTCTTCTTTAATGGGAATAGGAACTGCTACAGGTAAGCTCAAAAAGCCATTTGATAGTTGTTGGCACTAAGCCATTTCTCTTTGTTGGTTGCCTTTTAACTCATAATGTCATGTGATTTTAAAGTCTATGTGATGTGATGATGTGGCTTAATGAGACACACATACAGCCAACATGGCTAAATCATTATTTATGTGAACTTCACAATACATTGAATCAAAAAAATCTATGTATTGTTATTACTGATATAAAGGGCGTATGCAGCCTCACCCAAGGGTGTGCCCTAGAGGTCTCAGGTTCAATTCTCAGTGGAGCCAAATACATTAGGTTATATCTTTCCATCTGGACAAGCCGTGGTGGGAGTTCCCCTTTATATGTTCTGGTGGGAATTAGTAGGTACCCCGTGAAATTAGTTGAGATGTGCGCAACCTGGTGTGGACACTATGGTTATCACAAAAAATGAACATATGCAGCTGTCAGAATTTATCCATGGTGTCCAAATTTATGTGCTACTTATAAAAGTTATCCACTAAACTTAAATATTGTATTCTGTTGAAGTCTTGTGTAAAATATTAGTCACGCCTGTGCCTATCAGTACGTATTTTGCACCAGTTCCATTTTTCTTGTGCAAACGTCAAGTCCTTGACATATTTTAAGGTTTATAAGAACTGTAACAATCTAAACTGAAATAACAAATAAGCTCAAGGCTAATTTCCTGAGAAGTATTTGAGGTCGCGTATGCAGCCTTACCCAAGGGTGTGGCCTAGAGGTCTCAGGTTCAATTCTCAGTGGAGCCAAAAACATTAGGTTATTTCTTCCCATCTGTACAAGCTTGGTGGATAGAGTTCCCCAGTACTTGTGCTGGTGGGAATTAGTAGGTACCCTGTGGAATTAGTTGAGATGCGCGCAAACTGGTGGGGACACTCGGAGTTCTTTTTTCGTCTGTATAGAGCTTAGTGAAATGTGTAAGTTGAGGTGCAATGAAGGTCATGTTCAGTAGACAAAATGTTTTGCATTTCAACGAATTTCATTTATTAACGAAGAGAACTGGCTGCTGCAGATAACCGGAACAATTTTGTGTGATATTTCAGAATTTTCATGTAAGAAACGAAATATGTATCTGTTTCAATCAGTCGTGAGTGCACACAGAGAACATAAGAGAGCAAAGGAGGGGGTAGGATTCTTAAAGTCTCAATTAGTTTCTCGTATCAGTCCCTATAAATAAATGTGAGATTACCATAGGCCATAGGGATAGAGCAAATTATTTTTTCTGATGCTGCAGCAGATGGCGGAGCAGCCATCTGAAGATGGTTCCGGCAGCCGATGCGCCGTTTGCACCGCCACTCGCCCTTTCATCCTCCACTTTCTCCCCTTCAGAGGTCGCAACCGCCATCTTTGCACCGCCTGCATACTGGACTCCTACCCTGTCGGCTGTTCCTTCTGTCCCATCTGCTTTGATGTCTTCCTCCACAGCCCTCCTCCCCCTCACCTCCATCTCCGATGCTCAAAATGCATCTCTATCTCACACCTCTCTTGTATCTCTGATGCTGCTTCCTTCTCCCCTAGTTACTTGTGCCCTCCTTTTTCTAACCCTAATTTTCTTTCTTCCATATCACTCCGGATCCTGCTAATAATGCCATAGAATCAATCTCCATTTGGCTAACAGATTGTTGCCGCTGCTACCATTGCTTCTGAGTCTATCCACAATGTTGCTGATATGGCCTGGATTAACGCCGACATTAGGGTCCAAGAAGCTCTGTCAGCTAAGGCCGAAGCTGCCCAAGTTTTGGTTAAGCTAAAGAATTTGTTGGGCAACCAAGATCATTAGTTCGGTTCCAATTTCTCGTCCACACTTGTTTCTAATACTCCAGGTAACGACACAGGGGGGAAAAGATAAATTGAAGCAAAAGGATGATCCTCTCAATAGATGCAAATGATTGTGATACCCTTGATGATTAGATTAAGTAGTTTCAATTCTAAAACAATGCTTTATAAGATTTTTCTTTTTTTGTTGTGTGGCTACTGGCATCTAGCAACTTCTCTCTATTTTTGAATGCTCGGCTATTTCAGGGGATGCTTTTTGGCGAACAAAGGAATTGGAATTATTCATTCAACTATATCTCGCTTACTGTTAATGCCTCTCTTTCAATATCGAGTTTTATATAATCTTTGATTTTAATATGGTATGCTCAATTATATCTTTTTTGTTGTTGGAGTTCTCTTTGACACATCTTGGGCTTACTATCCAAGGTAGTGGAGAGTCTGACGATGATGTCACACATCATATTCGTGTTGGGTGGATGAAATGGGGGCTCACATTTGTAGTCTTGTGTTATAAGAAGGTGTCACCAAAACATAAATGCAAGTTCTATAGAGTGGTGTTAGACCAACTATGTTGTATGGAGCGGAGTATTGGTCAGTCAAGAACCCTCACGTCTAGAAGATGAAAGTTGCGAAAATGAGGATACTGAGATGGATGTGTGGGCTTACTAGGAGAGATATGAATAGAAATGGAGATATCTGGGTCAAGGTGGGAGTGGGCTCGATGGAGGACAAACTGCGGAAATAGAGACTGAGATGGTTTAGGATGTAAAGAGGAAATGTTGGATTCCCCAATACAGAGGTGTGAGAGGTTTGCTATGGATGGTTTCAAGAGAGGTAGAGGTAGGCTGAAGAAGAAGTACTCGTGAGAAGTGACGTGACGTGTCTCAGCGTTAAATTACCGAGGACATGACTTTAGATAAGACTTGGGAGACTATGAAGTACATATACCCTTCCAGACTAGTAGTTGTAGCATTCCTCTTGCAGTTTCTTGTTCTTCATTTTCTATTACTATCGGTTATTTCTTGTTCAATTATAGTATTATTTTGTCATGATACTGCTCCGTTTTTTTTTTGAGAACACTTGTCATACTATCTTTAGTATTTTGTCGTGGTTTCTTCACTTCTAGTACTTCTTTTACCAGACTACTTTGTTTCTTGAGCCGACGGTCTATTGAAAACAACCTCTCTACCTCCCAAGGTAGGGGTAAGGTTTGCGTACACATTATCCTCCCCAGACCTCACTGGTTGGATTACAGTGGCTATGCTATTGTCTTTTAGTAATGAAGAACTCTTCTATTTTAGTTTCTAACTTGGTGGGTAATGGACCCACTCATTTATAGTTCGTTTCTACTTTTTTTTTGTAGAAATTGGATTTATTGTTGATAAATGTTGTGCAAACTATACTCTCAAAGAAAAAGAAATGAAATTGTATTGTGATATTTAACTTCTGAATCATGCATGCTAATTTTTTATTACCGTGATGTCCTGGTCAACTTGCGTGCACCTCGATTATTTCCACAGGTACCTACTATGTCCCACCAACATAGGTACTGCTAAAAGAGGTAATATAGAGTACATTAGGGAGTTCACGTAGGTTTTATAGAACCAATACAAACTTATGCATGGTAGATCTACTATAGATGCGATATGTTATTTTTATTAAGAAGATTAATGGATTTTTTTTGGGGAGGATGAATGATCTCCACATTGCTTGACCTAGAAAAACCTTTTGTTGGAGAATTTGGGAAGGTAGGTCTTATATCAAATAAAATAAATAAATGCCACAAGTGTCACTTTAGAAAAAGTTATCAAAAGTGTGAAAATAGTGAACGAGGTGCAAAGTATTTTTGCCAAAACTAAAGGTTTATACTAGTGCTGGCAGAATTTACCCACTTTTTGATAACCCTCCCATATTTAAGCGGATTTGGGTGAGTGATGAACCCATTTTCAAACTGTAAAAAAGTTGGTCGGTCATGGGTCAAGTATGGGTTGCCTTCAATCAGCTATCGTGCATCACTCACAATTTCTTCAAATTGTTTTTGCTTCAGCAACAACTTTCTAGCATCTACTATTCAAATACTTTTTGCTTTTTAGACTTACAGTAAAGACTTCAGTAGATATGATTTCCTTGCCACTGTTAACAATATATGCTCTTATTTTTATATATAAAAATTATCCCAAACTAGCTATGTGTTGTTGTATAATTAAATGAATACAATAGTTAACTAGATATGTAAGAACAACAAATAAATACACATCCACTAACTTACGCTAACACACACACACACACAAAATTACCAGAATCATCAAGTTACGGTATTACTAGATTTTAAAAGAAACACAAAGTCAGTTATATAAGATGGGTACTTATTTTATCAACAAGACGAACAATTTACTCAAAAACTATTTTTATTTATTTTAAATGTCTACGATGAAAACACATTTTATACGAGCTCTTTTATATGGAAAATATGGTTATGTGACTGATCATATTGTCTTGAGTTCTTGAATTATTCCCAAGTAGATTAAAAAATATAATATTGTGATATAACAAAAGTGAATATCTAGTTTCACCGATACACTGTTACAAATTATTAAACATAACTGAAGATATTATTTGTTCCAAAACCACATACTATGTAATGTGGGTAAACCCATTTTCAACCCGCCCATTAATGACCCAATCCATTTTTTACCCGCATGATTGGGTATTGACCCATGTTTGCTCAACCCGTTTCCAACCCGCCCATTTGCCACCAACAGTTTATACCAAGAATCTTCCTTGAGTTCACTTTTATCCTTATGGTTGAGCTAACCAAATGAAGGGAGAGTGAAATCAACGAGGATCGTGGTGCCCACGTGCAGACAATTCAGATCTTTTGGTTCAGCGTGCTTCTGCTAAAAGAAACATTTTCCAACTGAAACACCACCATAAAGGTAGAGAAGCATGGGGTGGGGGGAGACTTTGGGCCTTCATGGAGGGAGAAAAGGGTTCCATATTCGTGGCTCGAGGTTGTGAGGGAGTTATAGCCTTTGATTCCAATATGCTATGAAGAGAAATCTAAAGAAAAATGGCAGCCCAGTGCACTAAGCTCCCGCCATGCACAAATCCGATGAAGGGCCGGACTACTAGGTGGGTTTATTATATGCAACCTTACATTGCATTTCTGAAAGAGGCAGTTTCCGCAGATCGTACCCGTGACATGATCCCCTTTAACCTAAGCAGACATCTGCATTGACATAAATAGCTGCTTGTAGAAATTTCGAATAGTGACCTAAAAAATTGAATGTAATCTAAAAAGTAACATCTTTATCTGCTGATGTTCCCGTTAGGGAAATTGGAAAATAAACTCTTTGGACTGGACACATCTGACATGTTTCTGTGAGTTTCCTCCTATTATTGGATGCTATTTGGCTGCAGATTTAAGATTTCTTTCAATTCAGTCACTTGCTGACAATAGTGATTGATGGTCCATTTCCTGCTGGACCCCTTCTTACTTCTGGCTTTATTCTTGCGAAAGGTAGAAACTGTGTGCATTTTTCTACGTTGTTTTGGCTATTTGATAATATTTCATGTCCAATGTACAACAACAACAACATCATATCCAGTGTAGTCCCACAAAGTGAGGTCTGAGGGAGGGTAGAGTGTATGCAGACCTTACCCCTACCTTCAGAGGTAGAGAGGTTGTCTTCAATTGACCCTTAGCTCAAGGAAAACAGTCCCCAAAAAAAGAAGTAATAGAAGTACAGAAAAGAACAAATAATAACAAAACTGCAACAAAACCATACGATAGTCGAGGTATTAAGGAATCAGCAGCTATTAACATCAATCAATGGACAAGAAACTATAGGAGAAAAACTACGACTACTAATATGAACGGATAGCAAGACAATGCACTACTACCTACTATCCTAATTCATGACCTCCACTCCCTCCCATCTAAGGTCATGCCCTCGGTAAGCTGAAACTGTGTTATGTCATGTCCAATGTAAAACACCTAAATCTCATCTGTAATATAGCAGGTTCGCATGCAAAATATGCATATCAAGATTTCAGATATGTATATCGTCCATGTATGGTTTTGTGCATCTCTCTAATAGTCGGATTTAGCATTGCTAACAAGTTTTTTTTTTTTGCAAGAATGGAGTGATATGTTGATGCTTCTACTAACTAGTCAAGAGGAAAATTGATATTATTCGTTGATATTACAGGAAAGACCAGAGCGAGAGATGCAGCATTGAACGCCATTCAATCTCCTCTGCTGGATATCGGTATAGAGAGGGCTACTGGAATTGTGTGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAGGTACCCGACTATTTTTTCTCTTGCTCTCTCTCTCTCTTCCGATACACTTACTAATCATCCTTAGTATGCACCTTTTGTTGACTGAAAAAGGCAGAAATGTATTCCATAACGTAGAAAAGATTTTGGCAGTAGAAGCCTTTTACTTTTTTCAATGTAGAGATTTTTCTTATTGAAGATGGCATATATGAATGTGTGAATTTCCTTGTATGATCGTCTCTTACAAAGAAAAATAAGAGAGAAACTTTATCTAATGGTGCATGAGGGTTGTGAAAAGCTATGTTGCTTAGACTCTTCAAAAATGTCGACGGGTGCGTGTCAGATCCTCCAAAAATAGTGTATTTTTGAAGGATCTGACACGGGTGCGGCAACATTTTTGGAGAGTCCAAGCAACTTAGGTGAAAAGATCAAACAACCTATGCTTCTGGTTCATCCTGTTTCCTTATCTGCTGTTTCTCAGCATTTATGTATGCCAATGTTGTCATTTTTAAAGTGCGCTTAAGCCTTGAAGCGTGGTACAAAACATGTTGAGCACTTTGCCTCGCTTTATGCACGCTTCAGTGTCGTCATCAAGGCATGCTTTTCCTTGCCAGTGAGAGTGAGTTTAGTCCTGAAGATGCGACACAATAAACAATTGATATTTCACGTTAGTTCTTGTCAATTTCTTTGTCCATATATTTATTATTCATGCTTGTGATTATTAATCTTGGACTACACATACATGTTTATATTTTTCTCCATAGCTCCATTTTTCAATAAATTCCACATTTGTGCTTAAAGCCTTAAAGGATCTTAGAGTTTTTTTACACTTTTCACTTATGATAAAACTGATGCACGCACACCAATTGTATGCTTGTTTTAGGCATCAAAATCATGTCAGACACAAATTCACTCATTAAAGCTATTGAACATGACCACACCTGCCAAGTTGGAGTTTCAAATTTCTCTAGATAATTTTTGGACCATTCGGCCCTTAAATTAGACTCTGAAAGGGATGCGAAGATTATAAGTTGTTATCCAATTTAATGAAGCTTTAAAACCAAAATATAATTTCAAGAAGTTAAAAATCTCATGCTGTATGCTATAAAAACAAGTTATAATGTTAAATTTGTAGACTTTTTGTGATTTTCACACCATTTGAACAAAACTTCAAAATGTAAGGAAGAAAATTGTTTTCATGCCTTCTTGGTAAAAATGTATATTGAAACTCTTTATCTTATGTTGGATAGAGACAATTGTATGCAAAGCAGTCTTTGTACCTTGAGTTGAAAATATGTTGTTAATAGTTAATGATTTTGGGGTCATATTTAAGCCTTGACCAGAATTATGTACAAATTTAAAATATCTATACTAGTTAATTGATGCTCTGATTTTTAAAGTTATGTCCAATCCTCTCGTGTACCCAACGTAGGTGTCCTTGGCCATGTTGCTTTTCTCCGCAATGACGATAACTGTTTTCTTAAATTTGGACCAGATATCAATTTATCATCATAACATCATTGTAGTGGTGATTTTGCCATATTCTCTCTATTATCAGTTTCAAAGCCTTCCTGACCTCCAAGTTTGCAGAAAGTTTATTGCTTTTTCTTAGTATAATAAAAAGCTTTCATCGTATGCATTTGTTATTTTATGTTTGTGAGCATCCCCGGATGATGCTAATTTCTGACTTATCTGATTAGCGAATTCAGCTTTCGTATCCTTGCATGTCCTCTTTGCACCTTTTTAGGTAAATGCTGCAGCAGAGGTTATATATGACCTTGTGGATCCAAGTGCTAACCTCATTTTTGGGGCGGTGATAGACCCATCAATAAGTGGACAGGTATGTTCGTATATCTCAATAGGTTATTCCTTCGTTGACTTGATTCTTTGCAGATCTTGACATGTACCGAAGCGAAAAATTATTGACTCCAAGGCTTCTTATTAGATAGTTGAAAGATTGAACAGTTATGTCATAAATTGGGAAACTGATCTTTAATTTAATCAGAGATGAGAAAGAATAAATAGTTGACTAATGGTAAAAAATATACCGTAAGTATCACCTTTTTTGCGAGTTTTATATCTGAACTATCACCAGCTATTTATAAAAACACAAGGTAGGGTAAGGTTGTGTATGCCAATCCTCCCCAGACCCCACTTGTGAGATTGCACCGTGTGTGTTGTCTTTGTATCTAGTTAGGATTAAGGCCCCCCCCACAAACACACACAGAAAAAAAAAAAAAAGAAAAAAAAAGTTTGAGGCTTGTATGTTAGTGTAGGGATAAAATGAGACTTGGAAAACTTGTTTACATCTCTGATTTGTCTCAATGGTGTTGAGGCGTAGAAGATCGATTGAACTCCTGTCGAATTTACGTTTTGCTGCATGGTCAATCTCATCATTATCCATGTGATGCAGGTCAGCATAACGCTGATTGCCACTGGTTTCAAGCGCCAAGAAGAAAGTGATATGAGGCCCCTCCAGGTATTCCTCTCTTCCATCCTATCCCTTCACATCTACATTACATGTGAAAATCTTTGGTTTTGCCGATCATTTGTGATACACATTCCACGGTGTTCAACTAACAGGGAAACCAACTAGCACAGGGAGATGCTTCACTTGGAACTAACAGACGACCTGCGTCCTTTCTGGAAGGTGGTTCAGTGGAAATTCCTGAGTTCCTCAGGAAAAAAGGGCGATTGCGCTATCCAAGAGCTTAAGTTAGTCCTTCATTTTCCTGCATGTATAGTACTTCCCTTTTTCTTCTTGTTCTCCAACATCTCTATCTTTCAAAGTGATACATATGCGTTATACATACAGGATCTTGGTTATGCATCGACTATCAAGTTTATCTCATGGAAAAACCATTGTCCATCTCGTTTTTCTT</genome_strand>
        <mrna_strand>CGTTTACGGCTCAGACATGGTTTTTGTGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAATGGGTGGAGGAACAGGGACTGGTGCGGCTCCTATAATTGCAGGAACTGCCAAATCAATGGGTATCTTAACTGTTGGTATCGTTACAACCCCCTTTTCTTTTGAGGGACGAAGAAGAGCAGTTCAAGCCCAAGAAGGAATTGCAGCTTTGAGAGAAAATGTTGATACTCTGATTGTCATTCCAAATGACAAATTATTGACAGCTGTTTCTCCATCAACCCCAGTAACTGAAGCTTTTAACCTGGCTGATGATATTCTTCGGCAAGGAGTTCGTGGTATTTCTGATATAATTACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGACCAGAGCGAGAGATGCAGCATTGAACGCCATTCAATCTCCTCTGCTGGATATCGGTATAGAGAGGGCTACTGGAATTGTGTGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGCTGCAGCAGAGGTTATATATGACCTTGTGGATCCAAGTGCTAACCTCATTTTTGGGGCGGTGATAGACCCATCAATAAGTGGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCATAACGCTGATTGCCACTGGTTTCAAGCGCCAAGAAGAAAGTGATATGAGGCCCCTCCAG........................................................................................................GGAAACCAACTAGCACAGGGAGATGCTTCACTTGGAACTAACAGACGACCTGCGTCCTTTCTGGAAGGTGGTTCAGTGGAAATTCCTGAGTTCCTCANGAAAAAAGGGCGATTGCGCTATCCAAGAGCTTAA....................................................................................................GATCTTGGTTATGCATCGACTATCAAGTTTATCTCATGGAAAAACCATTGT-CATCTCGTTTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E255922" ref_strand="+" ref_description="SGN-E255922 [cLEG-35-N24]">
      <seq>gatcccccgggctgcagggtggaatataactggtggtagtgatctaacattatttgaggtacccgactattttttctcttgctctctctctctcttccgatacacttactaatcatccttagtatgcaccttttgttgactgaaaaaggcagaaatgtattccataacgtagaaaagattttggcagtagaagccttttacttttttcaatgtagagatttttcttattgaagatggcatatatgaatgtgtgaatttccttgtatgatcgtctcttacaaagaaaaataagagagaaactttatctaatggtgcatgagggttgtgaaaagctatgttgcttagactcttcaaaaatgtcgacgggtgcgtgtcagatcctccaaaaatagtgtatttttgaaggatctgacacgggtgcggcaacatttttggagagtccaagcaacttaggtgaaaagatcaaacaacctatgcttctggttcatcctgtttccttatctgctgtttctcagcatttatgtatgccaatgttgtcatttttaaagtgcgcttaagccttgaagcgtggtacaaaacatgttgagcactttgcctcgctttatgcacgcttcagtgtcgtcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="61174" stop="59966"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60890" g_stop="60266" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="625" r_length="625" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E255922" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60890" e_stop="60266"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGGCTACTGGAATTGTGTGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAGGTACCCGACTATTTTTTCTCTTGCTCTCTCTCTCTCTTCCGATACACTTACTAATCATCCTTAGTATGCACCTTTTGTTGACTGAAAAAGGCAGAAATGTATTCCATAACGTAGAAAAGATTTTGGCAGTAGAAGCCTTTTACTTTTTTCAATGTAGAGATTTTTCTTATTGAAGATGGCATATATGAATGTGTGAATTTCCTTGTATGATCGTCTCTTACAAAGAAAAATAAGAGAGAAACTTTATCTAATGGTGCATGAGGGTTGTGAAAAGCTATGTTGCTTAGACTCTTCAAAAATGTCGACGGGTGCGTGTCAGATCCTCCAAAAATAGTGTATTTTTGAAGGATCTGACACGGGTGCGGCAACATTTTTGGAGAGTCCAAGCAACTTAGGTGAAAAGATCAAACAACCTATGCTTCTGGTTCATCCTGTTTCCTTATCTGCTGTTTCTCAGCATTTATGTATGCCAATGTTGTCATTTTTAAAGTGCGCTTAAGCCTTGAAGCGTGGTACAAAACATGTTGAGCACTTTGCCTCGCTTTATGCACGCTTCAGTGTCGTCAT</genome_strand>
        <mrna_strand>GATCCCCCGGGCTGCAGGGTGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAGGTACCCGACTATTTTTTCTCTTGCTCTCTCTCTCTCTTCCGATACACTTACTAATCATCCTTAGTATGCACCTTTTGTTGACTGAAAAAGGCAGAAATGTATTCCATAACGTAGAAAAGATTTTGGCAGTAGAAGCCTTTTACTTTTTTCAATGTAGAGATTTTTCTTATTGAAGATGGCATATATGAATGTGTGAATTTCCTTGTATGATCGTCTCTTACAAAGAAAAATAAGAGAGAAACTTTATCTAATGGTGCATGAGGGTTGTGAAAAGCTATGTTGCTTAGACTCTTCAAAAATGTCGACGGGTGCGTGTCAGATCCTCCAAAAATAGTGTATTTTTGAAGGATCTGACACGGGTGCGGCAACATTTTTGGAGAGTCCAAGCAACTTAGGTGAAAAGATCAAACAACCTATGCTTCTGGTTCATCCTGTTTCCTTATCTGCTGTTTCTCAGCATTTATGTATGCCAATGTTGTCATTTTTAAAGTGCGCTTAAGCCTTGAAGCGTGGTACAAAACATGTTGAGCACTTTGCCTCGCTTTATGCACGCTTCAGTGTCGTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E264051" ref_strand="+" ref_description="SGN-E264051 [cLEG-64-A13]">
      <seq>tggaatataactggtggtagtgatctaacattatttgaggtacccgactattttttctcttgctctctctctctcttccgatacacttactaatcatccttagtatgcaccttttgttgactgaaaaaggcagaaatgtattccataacgtagaaaagattttggcagtagaagccttttacttttttcaatgtagagatttttcttattgaagatggcatatatgaatgtgtgaatttccttgtatgatcgtctcttacaaagaaaaataagagagaaactttatctaatggtgcatgagggttgtgaaaagctatgttgcttagactcttcaaaaatgtcaccgggtgcgtgtcagatcctccaaaaatagtgtatttttgaaggatctgacacgggtgcggcaacatttttggagagtccaagcaacttaggtgaaaagatcaaacaacctatgcttctggttcatcctgtttccttatctgctgtttctcagcatttatgtatgccaatgttgtcatttttaaagtgcgcttaagccttgaagcgtggtacaaaacatgttgagcactttgcctcgctttatgcacgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="61171" stop="59977"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60871" g_stop="60277" g_length="595"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="595" r_length="595" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E264051" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60871" e_stop="60277"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAGGTACCCGACTATTTTTTCTCTTGCTCTCTCTCTCTCTTCCGATACACTTACTAATCATCCTTAGTATGCACCTTTTGTTGACTGAAAAAGGCAGAAATGTATTCCATAACGTAGAAAAGATTTTGGCAGTAGAAGCCTTTTACTTTTTTCAATGTAGAGATTTTTCTTATTGAAGATGGCATATATGAATGTGTGAATTTCCTTGTATGATCGTCTCTTACAAAGAAAAATAAGAGAGAAACTTTATCTAATGGTGCATGAGGGTTGTGAAAAGCTATGTTGCTTAGACTCTTCAAAAATGTCGACGGGTGCGTGTCAGATCCTCCAAAAATAGTGTATTTTTGAAGGATCTGACACGGGTGCGGCAACATTTTTGGAGAGTCCAAGCAACTTAGGTGAAAAGATCAAACAACCTATGCTTCTGGTTCATCCTGTTTCCTTATCTGCTGTTTCTCAGCATTTATGTATGCCAATGTTGTCATTTTTAAAGTGCGCTTAAGCCTTGAAGCGTGGTACAAAACATGTTGAGCACTTTGCCTCGCTTTATGCACGCTTC</genome_strand>
        <mrna_strand>TGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAGGTACCCGACTATTTTTTCTCTTGCTCTCTCTCTCTCTTCCGATACACTTACTAATCATCCTTAGTATGCACCTTTTGTTGACTGAAAAAGGCAGAAATGTATTCCATAACGTAGAAAAGATTTTGGCAGTAGAAGCCTTTTACTTTTTTCAATGTAGAGATTTTTCTTATTGAAGATGGCATATATGAATGTGTGAATTTCCTTGTATGATCGTCTCTTACAAAGAAAAATAAGAGAGAAACTTTATCTAATGGTGCATGAGGGTTGTGAAAAGCTATGTTGCTTAGACTCTTCAAAAATGTCACCGGGTGCGTGTCAGATCCTCCAAAAATAGTGTATTTTTGAAGGATCTGACACGGGTGCGGCAACATTTTTGGAGAGTCCAAGCAACTTAGGTGAAAAGATCAAACAACCTATGCTTCTGGTTCATCCTGTTTCCTTATCTGCTGTTTCTCAGCATTTATGTATGCCAATGTTGTCATTTTTAAAGTGCGCTTAAGCCTTGAAGCGTGGTACAAAACATGTTGAGCACTTTGCCTCGCTTTATGCACGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E297149" ref_strand="+" ref_description="SGN-E297149 [cLET-29-K5]">
      <seq>gagaatcgattgccaataggccaatagctcacgagaggactaggtgcaggtggtaatccagatatagggatgaatgctgccaaagaaagcaaggaggctatcgaagaagcagttcgcggtgcagatatggtttttgtgactgctggaatgggcggaggaacagggactggtggggctcctataattgcaggaattgccaaatcaatgggtatcttaactgttggtattgtcacaacccccttttcttttgagggacgaagaagagcagttcaagcccaagaaggaattgcagctttgagagaaaatgttgatacactaattgtcattcctaatgacaagttactgactgctgtttccttatcaaccccagtaactgaagcttttaacctggctgatgatattcttcggcaaggggttcgtggtatttctgatataattacgattcctggactggtaaatgttgattttgctgatgtgcgtgctattatggcaaatgctggttcttcgttgatgggaataggaactgctacagggaagaccagagccagagatgctgcattgaatgctgttcaatctcctttgctggacattggcatagagagagctacaggaattgtgtggaatataaccggtggtaacgatttaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="75088" stop="60542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74788" g_stop="74648" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="0.851"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74647" i_stop="72164" i_length="2484">
            <donor d_prob="0.994" d_score="0.82"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72163" g_stop="71864" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="441" r_length="300" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71863" i_stop="67050" i_length="4814">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67049" g_stop="66959" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="532" r_length="91" r_score="0.934"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66958" i_stop="60958" i_length="6001">
            <donor d_prob="0.995" d_score="0.94"/>
            <acceptor a_prob="0.959" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60957" g_stop="60842" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="648" r_length="116" r_score="0.862"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E297149" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74788" e_stop="74648"/>
          <exon e_start="72163" e_stop="71864"/>
          <exon e_start="67049" e_stop="66959"/>
          <exon e_start="60957" e_stop="60842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTATAGACTGCCAATAGGTCAAGAACTCACAAGGGGACTTGGTGCAGGCGGTAATCCAGATATAGGGATGAATGCTGCCAATGAGAGCAAGCAGGCCATTGAGGAAGCAGTTTACGGCTCAGACATGGTTTTTGTGACTGTAAGTTCAACCTATGTAATAACTTTAATTGGAAAAAGAAGTTTTGGGTTATTGAAATACACTTTATTCTTTCCTTTGTTTTGTTTCCCCTCTCATTTGTCAGAAACTTAGATTTCATATACTATTGTATAGAAACTTCTAATTCTTTCTTTTATAGTAAAACTAAGTATCTTCTTTTCGTGAGATACTACTTTTCTTAGTTGCTCGGACCCTTCTGTTTCGGTTCCGCACCCGTGTTGACACGACGTGGGTGTGGGATCTGTAGCGGATATGGTCAATTGATTTTGGGTACTTTGACCAAAATCGGAGAAATTTGGGACAGATGCAATGATTTCTATAATCAAACCAAAAGCTAAGGTGAAATGAAGAAAATGAAATACCTTGTATATCAAAATTTCTATGTCAATCTTTTTCGTTATTTCTCCTTTTGGGATTCTCCTCATGATCAATATTTCTCATCTGAAGACTTTGTATATTGACCACATAATATCTCATAATTTAGACTTATTACCCTATTGGACACCCACACTCGAATTTGAACAACTTAGCTTCTTTCTGTCCAATGTGCAGAGCAGCTGAAAGGTTTTTTCTAGTTATAGTACCAGATTGAATTGGTTAAATAAAATGCAGAATTCCTATGTTACATGTAACTTTAGGTAATGAAGTGCAGTTAAAGTATACTCACTTAAACCTGGCAACACTCTTCCTCCCACCCCGTCAAAATTTCTGAGCTCTTTCCCTGGCCCATAAAGATACTTGATACAGTAAAGGATGACTGTTGGAGGAAAGTACACTTAAATATGCTTTTTATAAACAAAGTTCAGTGTCTTTGGTGCTCATTAGAAAGATAGGTGTCACATTAGTCTGCTCCATCCCTTACAGCTTCTCTGATCTACCAACTTGAAATTGCTAATGTGCAACCTGAAGTGTGTCTGACTGCCTATTGCCTTCGTACTGCATAAGCTAAAGAGTTGAGGAGAATTAGTAGAGGAAGGAATCATTTAGTTTTTGATATAATATACGAGTATCTTAATAGCCATTAACGCTACCAAATAAATTTGAAGTATATATTAATGGCTATTAATTGGCATTTTATATGTTTCTATGATTATGATTCTTTCAATAGTTTTCTGAATATTTCTAACTTGTGACTTACATACTTTTTTTTTTAAGTTTCTAAAGATCTAATCATTCACAATTTTTTTTTTGGTAATAATCAATATTTAAATTAACACCGAAAATTATATGTTTTGCCTTTCGTACTTCAAACCGTACCTTCATTTCGGAAAGGAGGGTGAATTTTATATATAGTATTATTTTGTGAGGCAATGAGAAGATATTTCTAGTAACACAAGTTCCCAAATACGTGTGTACTTAGTATTCTCAGTTTAAAAGGGAAGGGTTGATAACAAGCAAAAAGGGGTCATTAGGCGAATCGGGAGCTGGAGAGAATAAATTTTGTTATTCTTAGCTTTTGAAATTGCAATCTGAAAATTGTTTCTGATTTATCTGATAGGACAAAAATAAACGATATTTCACAAGGATCTGGCGTATTGTATCATCCTTGCAAAGAGTTGATAAACTTTCAAAACAAAACATGCTTAATTGAATGAGAGGCTATGTTGGTACAAGCCTACAAGCGTAAACAGATGATAACTAAAATGGTGCTTGTAGCATGGCTATATCTTTGTATCAATCCAATACCAAGATATTTTAAACTTCAAATTATATCCGGAAGTCACAATTAAGTTTCTCTTAATGTGAAGAGACATTTTTTAGCATAATCATAAAAAAAGGATGTACCCAAGAATGTAATTTAAATTTATTCCTTGGCCTTTTGGTTCCAAGACTTTGTCAGATTGCATTAGCCTTATTAATCATCAACATGGTGCTATAAGCATCCAAGAAGGGCATCATATAGTACGCCATAAAAAAGTAAAACGTGTATACCTACCCTTCATCCGAGATGGTATCAGGCCGTTTCTTGGTGTAAGAGAGGAATCTGATCTCCCGTTCTTTTGATTTTCGTGCCATGCTTATCATTCAATCAGTTTTGTAAAAGGCGTGCTTGTTCAAAAACTGAAGCGAGACTCAAAATGTGTTGAGCGCTTTACCTCGTGTAATTTGCCCTTCAGTGTTGTCATCAAGGTTCCAAGGCATACTTTTTCTTGCCAGTGAGCCTCTTCTGAAGAGGCGACGTATGTTTCTCCCTTTGCGCCTTTTATCATTGAAGCCCAAACCTTATTTGTGCTTAAAGCTCCAATGGACCTTAGATCTTTTTTGTGCTTTTTGCTTTTGATATCAATCACTGCATTGAATACTAAGTATATATTTGCTTGAAAGTGCTGTAAAGCTAAATGTGGGATGATTACGTGTTATTATATGTAAATTAAAATTCCTCACATATCTTTAGAGTTTCCGGAGGCTATATTCTCTCACTTTTTGTTTCTTCCTCATATGTGGGCTCCAACATGTTATGTACAGGCTGGAATGGGTGGAGGAACAGGGACTGGTGCGGCTCCTATAATTGCAGGAACTGCCAAATCAATGGGTATCTTAACTGTTGGTATCGTTACAACCCCCTTTTCTTTTGAGGGACGAAGAAGAGCAGTTCAAGCCCAAGAAGGAATTGCAGCTTTGAGAGAAAATGTTGATACTCTGATTGTCATTCCAAATGACAAATTATTGACAGCTGTTTCTCCATCAACCCCAGTAACTGAAGCTTTTAACCTGGCTGATGATATTCTTCGGCAAGGAGTTCGTGGTATTTCTGATATAATTACGGTAAGTTTGTTAGTCACAGTCTTTTCTTTCATTTTCTGTTTTCTGCTTGCATAGTGCCTATGATCCTAAATAAGCATTTGCCTGATAATGCTTTAGGTCTAGGATCTTACTTTTATATGCATCACCAGGATGTGTTTTGTTTGTTCTATGCTTTGAAGGGAAATCTTAAACTATACACAGGTGAAGTATAAATCTCTAGATTTCCTCGCGCCTTAGTGTAAAACAAAGATGTATAACAACAAAAATAGCAACATACCCAGCGTAATACTACAAGTGGGATCTGGGGAGGGTGGTGTGTCCGCAACCTTACCCCTTACCTTGTGAAGATAGAGAGGGTGTTTCCGATAGACCCTCGGCTCATGATAAGGTAAAAATCGTCGTAGTAAATATAATCAATGCAATTGAAAGTTAGAGCTGATCTTACATGTGTTTAAGCAAGATAGGAGAAATAAAAACTAAGAATTGGTTATGCCACAACAAATTGCCAATCTAAGGATTTGTATCGAAATAGATTAGGTGTTAAATGATACCTTATGTATTTCGGATGGAATATATAAAAAAGCATATGCATTTTCTATGGAATAATTTAGTCATAGGTCTAAAGTGTATTAGGGAGCACAATATTAAGTTGTAATGTATGCACTATGTGAATTTAGTGTTATTGGGCATAAAATTGTGATATTGCTTAAAAGGAATCTTGAAAATAACACTGGAAGTGATGAACATGATGTCTAAAAAGGGAAGTAATTAGTTTAACAACTTTAATCAAGCTAATCAAGGTTAAAAAGTAACAATAATGTAACTAATTATAGGTGTAAAATCTTCTTATAAGGTTCTATTGCGCTTGAGTTGTCGAGATTTTTTTCTTGAATCACATTAGGAGAAAATGATGTGAATACAACTTTAAGGAGGTGTCATTCAATGAAGCCTGGCTCACAAATGATGGTTGCCCTCGTCTCTTTTTAGTGTTTTGACATTGATATTAGTAAGTGGAAAGGGCAATTCCTGCATACGACCCACCCATTTGTTAACACTCATTTGGTACGTTATCAATAATGTAAAATGATGGTACATTTTGTGAGAAACAAAAATTTGAGATGGAACCAAATTGATTATTCTGACAAGTTATTGAGGCTTAAATAGCTAAGTTTATATGACCTGTAAAGGAAAGGAAATCAAAACAAATAAATACCTAATTAAAATAGGAGTAAATCAAGCTACCTACTATATTTGCCCATATGCTATAAAATAGTTCTAGGACTCTTAACACCCCTTCAAGCTGATGCATACAAAATTACAAATTAGATGTACCAAGCTTGTTTCATATATAACTCATTTGGGACCGGCTAAGGACTTGGTGAATGTGCCTGCAAGCTGATGATCAGTAGGCCTACAATTTGTCATCCATGTCTCTTCAAGAATATCAAGTGCATATTTCCTATGTGAGATGACAATTCTTGATTTGGATTGAGCAACCTCAATGCCCACGAAGTACCTCAATCGACCAAGATCCTTAGTCTGAAAGTGCTGGAAAAAGTGATGTCTGAATTTGGTAATTCCCTCATCATCATTACCTGTGATAAATGTGCCATAAATGTACACTTTCAAAAACATGCACAAACCTGGAGCAAAGTGACAATAGAACACAAAATGATCAGCTTCACTTCGTACCATGCCAAACTCCTGAATAGCCATGCTAAACTTTTCAAACCATGCCCGAGGAGACTGTTTGAAGCCACAAAGTGCTCGTTGTAGTCTCCATACCATGTTACTAACCTCCCTCAGAGCAACAAAACCAGATGGTTGTTTTATATATACCTCATCTTCGAGATCTCCATGAAAAAAGACATTTTTGATATACAACTGGTAGAGAGGCCAATGACGAACATTAACCATGGATAAAAAGATATGGACTGAAGTAATCTTGGCCACATGAGGGAAGATATCATCATTGTCAAGACCAAAAGTCTGTGTATAAACCTTGACCATTAGTTGAGTTGTCTGTCCATTGGGGCCTACCTTCATTGTATATACCCAACAACAACCAATTGTGGATTTATCTAGAGGTAGAGGAATAAGCTCCCAAGTACCACTAGATTGTAAGGCAGGCATCTCCTCAATCATAGCTTCTTGTTGGTCTGGATGAGAAAGAGCTTCACGTGTAGTCTTAGGAATAGACACAAAGGATGGTGATGATACAAAGGCAATATGGGTTGTTGGCAAACAATGATAGCTCAAACAAGTATAAATAGGATTAGGGTTACGAGTAGAGCAATTACCTTTTCGAGTGTCAGCGGAAGAACTCAGTGTAGACAAGTCCTCAGTAGGCAAGGATTTTGATGAAGGGTTTGAATCATTTGGGCGCGGACGACGATGATAGGTCAATAGTGGTGGAGGTGTAGAGGAGGAAGATGGAGTTATAGAAGATGAGGCGGAAGGGGAGACTATGGTGGGATCTCCAAAAGATGGAATTGGTAGAACCTCATTAATGCCTAATTTTTCAACAGAGGATGTAAAGTAGGGCTTACCTTCAAAAAAAGTAACATCAACGGACATAAGGTATCGCTGGAGGTGAGGTGAGAAACATCGGTATCCCTTCTCTACTTCTGAAAAACCAAGAAAGACACATTTAAGAGCACAAGGAGCTAATTTTTCTTTTTCTGGAGTGAGTGTATGGACAAAGCATGTGCTCCCAAAGACACGTGGTGGAAGAGAAAATAAGGTTGACTGGGGAAATAAAATAGAGTGTGGAACCTGATTTTGAATAGCAAAGGAAGGCATACGGTTAATCAGATAACAAGAGGTGAGCACTACATCCCCCCAAGATCCAATGGAACACTTGCTTGTATGAGAAGAGTGCGTGCAGTCTTAACAATATGACTATTTTTTCTCTTTGCAACCCTATTTTGTTGTGTAGTATAAGGACAAAATGTTTGATGAAGTATTCCACTGGACGACAGAAATTGTTTAAATTGAGATGATAAATATTCACGCGCATTATCACTACGAAAAGTGCGAATAGAAACACCAAATTGAGTTCTTACTTCAGCACAAAAAGTTTGAAATATGAAAGCTAATTCAGAAAGATCTTTCATTAAGAACACCCAAGTGTACCTTGAGTAATCATCAACGAAATGCTTAAAATTCAATGTAGAACTAATTCTACTAGGACCCCAAATATCATAATGAACTAAATGAAAAGGAGACTCCGCATAATTATTAGGACTACGTGAAAAAAAAAATTGGGTGTGCTTCCCTAGTTGACAGGACTCACAATCTAACTTAGACAATTTAGACAAGTTAGGTATCATCTTTTGAAGTTTGGATAAACTAGGGTGTCCCAATCGTCTGTGGATTAAATCTGGAGAGTCAGATATTGAACAAACTGTAGTGGATTCATGAGGATTAAGATAATAAAGTCCATTTGACTCATGCCCTTCTCCAATTATCCTTCCTGTACAGAGGTCTTGTATAACAAAGAAGTCACTAAAGAATGAGACGAAACAATTTAAAGTCTGAGCCAAACGACTTATTGACATGAGGCTAAAGAGACAACCAGGGACAAGAAGAACATTATTCAGAGTCAAGGAAGGTAAGGGATTGGCTTGACCGATTCCGGTTGCCTTGGTTTGAGAACCATTAGCTATCCTAATTGTGGGAAGGGACTGAGAGTAAATAATATCAGACAATACAAATTTGTCACCAGTAACGTGGGTAGCAGCGCCTGAGTCCATGACCCAACAACCATGTGTGGTGGATTGTGAGATACTAGTGGCAGGATTAACAGGATTACCATTTTTGGCAGCTATTGATGAAGATGTCTGCTTACTCGCCTGGTACTGAAGAAAGTCATTGTATTCTATCTCAGACAAAGAGACCAGTCGATTGGTTGGATTACCAGTGGATTCAGTTTGAGGGTTGCTGGAGCCCATTAATTTAGTGCCAAACATGTTGAATCCAAGAGAAATGAAAACAGATCTATCAGTGTCCAAAAAAAAACGTGAATTTCGGAAAAGCACCTGAAATATAGATTGGAAAAACTGCTTGTTGTCTCGCTGGAAAATTAGATCTGACCGCTGGAAAGTGATTGAAATTAGTAAAGAAATTAAATGGGTAGGGTCGGAATGTTGCAACGAATCTACTGAAAAAGGAATCTGCTGGAGAAGTGGTCGGAAAACATCAAGCGAGGATTCTGATTGTAACGGTGGTACTGATATATGCAAAGTACCCCTGGAGAATGTCGAAATTGTGGACTATGGAGGTTTTGCTGGAAAAACGCTCAACAATTTTGTTCCCTTACTTTATTCATGTTTTCTCACTAAAGAAAACTTTAATAAAGAATAAGAGTTTGAGAGAGAATTCACCTTGATTATTCCCACTAGCTATTGGGAATCAAGCTACCTACTATATACACACACACACACACACACACACACACTATAGAATATTCCATGATTTTAACACACTTTATCAAAAAATAAAAGAAGTAAAATGATGGCTCATTTATCACCACAAGCTTTTGATACTTACCATAGGATCCTCTTACTACTTCCAAGGCAAATGAGGCTCATTAAGTACTCATATCACTCCCCTTAGTAGGATAACTCCATGTACTCTTCATGCGTTCATCTTTACTTAAATGCATCTGAACTTATGGACCTAAATGTAGCAAATACATGTCAATTTTCTATATTTGGCATATTCTTTCCTTCTACATAAAATGGATTTTCTTTCCAAAGTGCATTCTTCTGCTAATTTGGTGAATATCAAGGCTTGTATTTATTTATCCATGATATATCTGGCATGATTTACAGATTCCTGGGCTAGTAAATGTGGATTTTGCTGATGTGCGTGCTATTATGGCAAATGCTGGGTCTTCTTTAATGGGAATAGGAACTGCTACAGGTAAGCTCAAAAAGCCATTTGATAGTTGTTGGCACTAAGCCATTTCTCTTTGTTGGTTGCCTTTTAACTCATAATGTCATGTGATTTTAAAGTCTATGTGATGTGATGATGTGGCTTAATGAGACACACATACAGCCAACATGGCTAAATCATTATTTATGTGAACTTCACAATACATTGAATCAAAAAAATCTATGTATTGTTATTACTGATATAAAGGGCGTATGCAGCCTCACCCAAGGGTGTGCCCTAGAGGTCTCAGGTTCAATTCTCAGTGGAGCCAAATACATTAGGTTATATCTTTCCATCTGGACAAGCCGTGGTGGGAGTTCCCCTTTATATGTTCTGGTGGGAATTAGTAGGTACCCCGTGAAATTAGTTGAGATGTGCGCAACCTGGTGTGGACACTATGGTTATCACAAAAAATGAACATATGCAGCTGTCAGAATTTATCCATGGTGTCCAAATTTATGTGCTACTTATAAAAGTTATCCACTAAACTTAAATATTGTATTCTGTTGAAGTCTTGTGTAAAATATTAGTCACGCCTGTGCCTATCAGTACGTATTTTGCACCAGTTCCATTTTTCTTGTGCAAACGTCAAGTCCTTGACATATTTTAAGGTTTATAAGAACTGTAACAATCTAAACTGAAATAACAAATAAGCTCAAGGCTAATTTCCTGAGAAGTATTTGAGGTCGCGTATGCAGCCTTACCCAAGGGTGTGGCCTAGAGGTCTCAGGTTCAATTCTCAGTGGAGCCAAAAACATTAGGTTATTTCTTCCCATCTGTACAAGCTTGGTGGATAGAGTTCCCCAGTACTTGTGCTGGTGGGAATTAGTAGGTACCCTGTGGAATTAGTTGAGATGCGCGCAAACTGGTGGGGACACTCGGAGTTCTTTTTTCGTCTGTATAGAGCTTAGTGAAATGTGTAAGTTGAGGTGCAATGAAGGTCATGTTCAGTAGACAAAATGTTTTGCATTTCAACGAATTTCATTTATTAACGAAGAGAACTGGCTGCTGCAGATAACCGGAACAATTTTGTGTGATATTTCAGAATTTTCATGTAAGAAACGAAATATGTATCTGTTTCAATCAGTCGTGAGTGCACACAGAGAACATAAGAGAGCAAAGGAGGGGGTAGGATTCTTAAAGTCTCAATTAGTTTCTCGTATCAGTCCCTATAAATAAATGTGAGATTACCATAGGCCATAGGGATAGAGCAAATTATTTTTTCTGATGCTGCAGCAGATGGCGGAGCAGCCATCTGAAGATGGTTCCGGCAGCCGATGCGCCGTTTGCACCGCCACTCGCCCTTTCATCCTCCACTTTCTCCCCTTCAGAGGTCGCAACCGCCATCTTTGCACCGCCTGCATACTGGACTCCTACCCTGTCGGCTGTTCCTTCTGTCCCATCTGCTTTGATGTCTTCCTCCACAGCCCTCCTCCCCCTCACCTCCATCTCCGATGCTCAAAATGCATCTCTATCTCACACCTCTCTTGTATCTCTGATGCTGCTTCCTTCTCCCCTAGTTACTTGTGCCCTCCTTTTTCTAACCCTAATTTTCTTTCTTCCATATCACTCCGGATCCTGCTAATAATGCCATAGAATCAATCTCCATTTGGCTAACAGATTGTTGCCGCTGCTACCATTGCTTCTGAGTCTATCCACAATGTTGCTGATATGGCCTGGATTAACGCCGACATTAGGGTCCAAGAAGCTCTGTCAGCTAAGGCCGAAGCTGCCCAAGTTTTGGTTAAGCTAAAGAATTTGTTGGGCAACCAAGATCATTAGTTCGGTTCCAATTTCTCGTCCACACTTGTTTCTAATACTCCAGGTAACGACACAGGGGGGAAAAGATAAATTGAAGCAAAAGGATGATCCTCTCAATAGATGCAAATGATTGTGATACCCTTGATGATTAGATTAAGTAGTTTCAATTCTAAAACAATGCTTTATAAGATTTTTCTTTTTTTGTTGTGTGGCTACTGGCATCTAGCAACTTCTCTCTATTTTTGAATGCTCGGCTATTTCAGGGGATGCTTTTTGGCGAACAAAGGAATTGGAATTATTCATTCAACTATATCTCGCTTACTGTTAATGCCTCTCTTTCAATATCGAGTTTTATATAATCTTTGATTTTAATATGGTATGCTCAATTATATCTTTTTTGTTGTTGGAGTTCTCTTTGACACATCTTGGGCTTACTATCCAAGGTAGTGGAGAGTCTGACGATGATGTCACACATCATATTCGTGTTGGGTGGATGAAATGGGGGCTCACATTTGTAGTCTTGTGTTATAAGAAGGTGTCACCAAAACATAAATGCAAGTTCTATAGAGTGGTGTTAGACCAACTATGTTGTATGGAGCGGAGTATTGGTCAGTCAAGAACCCTCACGTCTAGAAGATGAAAGTTGCGAAAATGAGGATACTGAGATGGATGTGTGGGCTTACTAGGAGAGATATGAATAGAAATGGAGATATCTGGGTCAAGGTGGGAGTGGGCTCGATGGAGGACAAACTGCGGAAATAGAGACTGAGATGGTTTAGGATGTAAAGAGGAAATGTTGGATTCCCCAATACAGAGGTGTGAGAGGTTTGCTATGGATGGTTTCAAGAGAGGTAGAGGTAGGCTGAAGAAGAAGTACTCGTGAGAAGTGACGTGACGTGTCTCAGCGTTAAATTACCGAGGACATGACTTTAGATAAGACTTGGGAGACTATGAAGTACATATACCCTTCCAGACTAGTAGTTGTAGCATTCCTCTTGCAGTTTCTTGTTCTTCATTTTCTATTACTATCGGTTATTTCTTGTTCAATTATAGTATTATTTTGTCATGATACTGCTCCGTTTTTTTTTTGAGAACACTTGTCATACTATCTTTAGTATTTTGTCGTGGTTTCTTCACTTCTAGTACTTCTTTTACCAGACTACTTTGTTTCTTGAGCCGACGGTCTATTGAAAACAACCTCTCTACCTCCCAAGGTAGGGGTAAGGTTTGCGTACACATTATCCTCCCCAGACCTCACTGGTTGGATTACAGTGGCTATGCTATTGTCTTTTAGTAATGAAGAACTCTTCTATTTTAGTTTCTAACTTGGTGGGTAATGGACCCACTCATTTATAGTTCGTTTCTACTTTTTTTTTGTAGAAATTGGATTTATTGTTGATAAATGTTGTGCAAACTATACTCTCAAAGAAAAAGAAATGAAATTGTATTGTGATATTTAACTTCTGAATCATGCATGCTAATTTTTTATTACCGTGATGTCCTGGTCAACTTGCGTGCACCTCGATTATTTCCACAGGTACCTACTATGTCCCACCAACATAGGTACTGCTAAAAGAGGTAATATAGAGTACATTAGGGAGTTCACGTAGGTTTTATAGAACCAATACAAACTTATGCATGGTAGATCTACTATAGATGCGATATGTTATTTTTATTAAGAAGATTAATGGATTTTTTTTGGGGAGGATGAATGATCTCCACATTGCTTGACCTAGAAAAACCTTTTGTTGGAGAATTTGGGAAGGTAGGTCTTATATCAAATAAAATAAATAAATGCCACAAGTGTCACTTTAGAAAAAGTTATCAAAAGTGTGAAAATAGTGAACGAGGTGCAAAGTATTTTTGCCAAAACTAAAGGTTTATACTAGTGCTGGCAGAATTTACCCACTTTTTGATAACCCTCCCATATTTAAGCGGATTTGGGTGAGTGATGAACCCATTTTCAAACTGTAAAAAAGTTGGTCGGTCATGGGTCAAGTATGGGTTGCCTTCAATCAGCTATCGTGCATCACTCACAATTTCTTCAAATTGTTTTTGCTTCAGCAACAACTTTCTAGCATCTACTATTCAAATACTTTTTGCTTTTTAGACTTACAGTAAAGACTTCAGTAGATATGATTTCCTTGCCACTGTTAACAATATATGCTCTTATTTTTATATATAAAAATTATCCCAAACTAGCTATGTGTTGTTGTATAATTAAATGAATACAATAGTTAACTAGATATGTAAGAACAACAAATAAATACACATCCACTAACTTACGCTAACACACACACACACACAAAATTACCAGAATCATCAAGTTACGGTATTACTAGATTTTAAAAGAAACACAAAGTCAGTTATATAAGATGGGTACTTATTTTATCAACAAGACGAACAATTTACTCAAAAACTATTTTTATTTATTTTAAATGTCTACGATGAAAACACATTTTATACGAGCTCTTTTATATGGAAAATATGGTTATGTGACTGATCATATTGTCTTGAGTTCTTGAATTATTCCCAAGTAGATTAAAAAATATAATATTGTGATATAACAAAAGTGAATATCTAGTTTCACCGATACACTGTTACAAATTATTAAACATAACTGAAGATATTATTTGTTCCAAAACCACATACTATGTAATGTGGGTAAACCCATTTTCAACCCGCCCATTAATGACCCAATCCATTTTTTACCCGCATGATTGGGTATTGACCCATGTTTGCTCAACCCGTTTCCAACCCGCCCATTTGCCACCAACAGTTTATACCAAGAATCTTCCTTGAGTTCACTTTTATCCTTATGGTTGAGCTAACCAAATGAAGGGAGAGTGAAATCAACGAGGATCGTGGTGCCCACGTGCAGACAATTCAGATCTTTTGGTTCAGCGTGCTTCTGCTAAAAGAAACATTTTCCAACTGAAACACCACCATAAAGGTAGAGAAGCATGGGGTGGGGGGAGACTTTGGGCCTTCATGGAGGGAGAAAAGGGTTCCATATTCGTGGCTCGAGGTTGTGAGGGAGTTATAGCCTTTGATTCCAATATGCTATGAAGAGAAATCTAAAGAAAAATGGCAGCCCAGTGCACTAAGCTCCCGCCATGCACAAATCCGATGAAGGGCCGGACTACTAGGTGGGTTTATTATATGCAACCTTACATTGCATTTCTGAAAGAGGCAGTTTCCGCAGATCGTACCCGTGACATGATCCCCTTTAACCTAAGCAGACATCTGCATTGACATAAATAGCTGCTTGTAGAAATTTCGAATAGTGACCTAAAAAATTGAATGTAATCTAAAAAGTAACATCTTTATCTGCTGATGTTCCCGTTAGGGAAATTGGAAAATAAACTCTTTGGACTGGACACATCTGACATGTTTCTGTGAGTTTCCTCCTATTATTGGATGCTATTTGGCTGCAGATTTAAGATTTCTTTCAATTCAGTCACTTGCTGACAATAGTGATTGATGGTCCATTTCCTGCTGGACCCCTTCTTACTTCTGGCTTTATTCTTGCGAAAGGTAGAAACTGTGTGCATTTTTCTACGTTGTTTTGGCTATTTGATAATATTTCATGTCCAATGTACAACAACAACAACATCATATCCAGTGTAGTCCCACAAAGTGAGGTCTGAGGGAGGGTAGAGTGTATGCAGACCTTACCCCTACCTTCAGAGGTAGAGAGGTTGTCTTCAATTGACCCTTAGCTCAAGGAAAACAGTCCCCAAAAAAAGAAGTAATAGAAGTACAGAAAAGAACAAATAATAACAAAACTGCAACAAAACCATACGATAGTCGAGGTATTAAGGAATCAGCAGCTATTAACATCAATCAATGGACAAGAAACTATAGGAGAAAAACTACGACTACTAATATGAACGGATAGCAAGACAATGCACTACTACCTACTATCCTAATTCATGACCTCCACTCCCTCCCATCTAAGGTCATGCCCTCGGTAAGCTGAAACTGTGTTATGTCATGTCCAATGTAAAACACCTAAATCTCATCTGTAATATAGCAGGTTCGCATGCAAAATATGCATATCAAGATTTCAGATATGTATATCGTCCATGTATGGTTTTGTGCATCTCTCTAATAGTCGGATTTAGCATTGCTAACAAGTTTTTTTTTTTTGCAAGAATGGAGTGATATGTTGATGCTTCTACTAACTAGTCAAGAGGAAAATTGATATTATTCGTTGATATTACAGGAAAGACCAGAGCGAGAGATGCAGCATTGAACGCCATTCAATCTCCTCTGCTGGATATCGGTATAGAGAGGGCTACTGGAATTGTGTGGAATATAACTGGTGGTAGTGATCTAACA</genome_strand>
        <mrna_strand>GAGAATCGATTGCCAATAGGCCAATAGCTCACGAGAGGACTAGGTGCAGGTGGTAATCCAGATATAGGGATGAATGCTGCCAAAGAAAGCAAGGAGGCTATCGAAGAAGCAGTTCGCGGTGCAGATATGGTTTTTGTGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAATGGGCGGAGGAACAGGGACTGGTGGGGCTCCTATAATTGCAGGAATTGCCAAATCAATGGGTATCTTAACTGTTGGTATTGTCACAACCCCCTTTTCTTTTGAGGGACGAAGAAGAGCAGTTCAAGCCCAAGAAGGAATTGCAGCTTTGAGAGAAAATGTTGATACACTAATTGTCATTCCTAATGACAAGTTACTGACTGCTGTTTCCTTATCAACCCCAGTAACTGAAGCTTTTAACCTGGCTGATGATATTCTTCGGCAAGGGGTTCGTGGTATTTCTGATATAATTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E325732" ref_strand="+" ref_description="SGN-E325732 [cTOC-15-N5]">
      <seq>agacatggtttttgtgactgctggaatgggtggaggaacagggactggtgcggctcctataattgcaggaactgccaaatcaatgggtatcttaactgttggtatcgttacaacccccttttcttttgagggacgaagaagagcagttcaagcccaagaaggaattgcagctttgagagaaaatgttgatactctgattgtcattccaaatgacaaattattgacagctgtttctccatcaaccccagtaactgaagcttttaacctggctgatgatattcttcggcaaggagttcgtggtatttctgatataattacgattcctgggctagtaaatgtggattttgctgatgtgcgtgctattatggcaaatgctgggtcttctttaatgggaataggaactgctacaggaaagaccagagcgagagatgcagcattgaacgccattcaatctcctctgctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="74966" stop="60604"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74666" g_stop="74648" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74647" i_stop="72164" i_length="2484">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72163" g_stop="71864" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="319" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71863" i_stop="67050" i_length="4814">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67049" g_stop="66959" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="410" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66958" i_stop="60958" i_length="6001">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60957" g_stop="60904" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="464" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E325732" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74666" e_stop="74648"/>
          <exon e_start="72163" e_stop="71864"/>
          <exon e_start="67049" e_stop="66959"/>
          <exon e_start="60957" e_stop="60904"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACATGGTTTTTGTGACTGTAAGTTCAACCTATGTAATAACTTTAATTGGAAAAAGAAGTTTTGGGTTATTGAAATACACTTTATTCTTTCCTTTGTTTTGTTTCCCCTCTCATTTGTCAGAAACTTAGATTTCATATACTATTGTATAGAAACTTCTAATTCTTTCTTTTATAGTAAAACTAAGTATCTTCTTTTCGTGAGATACTACTTTTCTTAGTTGCTCGGACCCTTCTGTTTCGGTTCCGCACCCGTGTTGACACGACGTGGGTGTGGGATCTGTAGCGGATATGGTCAATTGATTTTGGGTACTTTGACCAAAATCGGAGAAATTTGGGACAGATGCAATGATTTCTATAATCAAACCAAAAGCTAAGGTGAAATGAAGAAAATGAAATACCTTGTATATCAAAATTTCTATGTCAATCTTTTTCGTTATTTCTCCTTTTGGGATTCTCCTCATGATCAATATTTCTCATCTGAAGACTTTGTATATTGACCACATAATATCTCATAATTTAGACTTATTACCCTATTGGACACCCACACTCGAATTTGAACAACTTAGCTTCTTTCTGTCCAATGTGCAGAGCAGCTGAAAGGTTTTTTCTAGTTATAGTACCAGATTGAATTGGTTAAATAAAATGCAGAATTCCTATGTTACATGTAACTTTAGGTAATGAAGTGCAGTTAAAGTATACTCACTTAAACCTGGCAACACTCTTCCTCCCACCCCGTCAAAATTTCTGAGCTCTTTCCCTGGCCCATAAAGATACTTGATACAGTAAAGGATGACTGTTGGAGGAAAGTACACTTAAATATGCTTTTTATAAACAAAGTTCAGTGTCTTTGGTGCTCATTAGAAAGATAGGTGTCACATTAGTCTGCTCCATCCCTTACAGCTTCTCTGATCTACCAACTTGAAATTGCTAATGTGCAACCTGAAGTGTGTCTGACTGCCTATTGCCTTCGTACTGCATAAGCTAAAGAGTTGAGGAGAATTAGTAGAGGAAGGAATCATTTAGTTTTTGATATAATATACGAGTATCTTAATAGCCATTAACGCTACCAAATAAATTTGAAGTATATATTAATGGCTATTAATTGGCATTTTATATGTTTCTATGATTATGATTCTTTCAATAGTTTTCTGAATATTTCTAACTTGTGACTTACATACTTTTTTTTTTAAGTTTCTAAAGATCTAATCATTCACAATTTTTTTTTTGGTAATAATCAATATTTAAATTAACACCGAAAATTATATGTTTTGCCTTTCGTACTTCAAACCGTACCTTCATTTCGGAAAGGAGGGTGAATTTTATATATAGTATTATTTTGTGAGGCAATGAGAAGATATTTCTAGTAACACAAGTTCCCAAATACGTGTGTACTTAGTATTCTCAGTTTAAAAGGGAAGGGTTGATAACAAGCAAAAAGGGGTCATTAGGCGAATCGGGAGCTGGAGAGAATAAATTTTGTTATTCTTAGCTTTTGAAATTGCAATCTGAAAATTGTTTCTGATTTATCTGATAGGACAAAAATAAACGATATTTCACAAGGATCTGGCGTATTGTATCATCCTTGCAAAGAGTTGATAAACTTTCAAAACAAAACATGCTTAATTGAATGAGAGGCTATGTTGGTACAAGCCTACAAGCGTAAACAGATGATAACTAAAATGGTGCTTGTAGCATGGCTATATCTTTGTATCAATCCAATACCAAGATATTTTAAACTTCAAATTATATCCGGAAGTCACAATTAAGTTTCTCTTAATGTGAAGAGACATTTTTTAGCATAATCATAAAAAAAGGATGTACCCAAGAATGTAATTTAAATTTATTCCTTGGCCTTTTGGTTCCAAGACTTTGTCAGATTGCATTAGCCTTATTAATCATCAACATGGTGCTATAAGCATCCAAGAAGGGCATCATATAGTACGCCATAAAAAAGTAAAACGTGTATACCTACCCTTCATCCGAGATGGTATCAGGCCGTTTCTTGGTGTAAGAGAGGAATCTGATCTCCCGTTCTTTTGATTTTCGTGCCATGCTTATCATTCAATCAGTTTTGTAAAAGGCGTGCTTGTTCAAAAACTGAAGCGAGACTCAAAATGTGTTGAGCGCTTTACCTCGTGTAATTTGCCCTTCAGTGTTGTCATCAAGGTTCCAAGGCATACTTTTTCTTGCCAGTGAGCCTCTTCTGAAGAGGCGACGTATGTTTCTCCCTTTGCGCCTTTTATCATTGAAGCCCAAACCTTATTTGTGCTTAAAGCTCCAATGGACCTTAGATCTTTTTTGTGCTTTTTGCTTTTGATATCAATCACTGCATTGAATACTAAGTATATATTTGCTTGAAAGTGCTGTAAAGCTAAATGTGGGATGATTACGTGTTATTATATGTAAATTAAAATTCCTCACATATCTTTAGAGTTTCCGGAGGCTATATTCTCTCACTTTTTGTTTCTTCCTCATATGTGGGCTCCAACATGTTATGTACAGGCTGGAATGGGTGGAGGAACAGGGACTGGTGCGGCTCCTATAATTGCAGGAACTGCCAAATCAATGGGTATCTTAACTGTTGGTATCGTTACAACCCCCTTTTCTTTTGAGGGACGAAGAAGAGCAGTTCAAGCCCAAGAAGGAATTGCAGCTTTGAGAGAAAATGTTGATACTCTGATTGTCATTCCAAATGACAAATTATTGACAGCTGTTTCTCCATCAACCCCAGTAACTGAAGCTTTTAACCTGGCTGATGATATTCTTCGGCAAGGAGTTCGTGGTATTTCTGATATAATTACGGTAAGTTTGTTAGTCACAGTCTTTTCTTTCATTTTCTGTTTTCTGCTTGCATAGTGCCTATGATCCTAAATAAGCATTTGCCTGATAATGCTTTAGGTCTAGGATCTTACTTTTATATGCATCACCAGGATGTGTTTTGTTTGTTCTATGCTTTGAAGGGAAATCTTAAACTATACACAGGTGAAGTATAAATCTCTAGATTTCCTCGCGCCTTAGTGTAAAACAAAGATGTATAACAACAAAAATAGCAACATACCCAGCGTAATACTACAAGTGGGATCTGGGGAGGGTGGTGTGTCCGCAACCTTACCCCTTACCTTGTGAAGATAGAGAGGGTGTTTCCGATAGACCCTCGGCTCATGATAAGGTAAAAATCGTCGTAGTAAATATAATCAATGCAATTGAAAGTTAGAGCTGATCTTACATGTGTTTAAGCAAGATAGGAGAAATAAAAACTAAGAATTGGTTATGCCACAACAAATTGCCAATCTAAGGATTTGTATCGAAATAGATTAGGTGTTAAATGATACCTTATGTATTTCGGATGGAATATATAAAAAAGCATATGCATTTTCTATGGAATAATTTAGTCATAGGTCTAAAGTGTATTAGGGAGCACAATATTAAGTTGTAATGTATGCACTATGTGAATTTAGTGTTATTGGGCATAAAATTGTGATATTGCTTAAAAGGAATCTTGAAAATAACACTGGAAGTGATGAACATGATGTCTAAAAAGGGAAGTAATTAGTTTAACAACTTTAATCAAGCTAATCAAGGTTAAAAAGTAACAATAATGTAACTAATTATAGGTGTAAAATCTTCTTATAAGGTTCTATTGCGCTTGAGTTGTCGAGATTTTTTTCTTGAATCACATTAGGAGAAAATGATGTGAATACAACTTTAAGGAGGTGTCATTCAATGAAGCCTGGCTCACAAATGATGGTTGCCCTCGTCTCTTTTTAGTGTTTTGACATTGATATTAGTAAGTGGAAAGGGCAATTCCTGCATACGACCCACCCATTTGTTAACACTCATTTGGTACGTTATCAATAATGTAAAATGATGGTACATTTTGTGAGAAACAAAAATTTGAGATGGAACCAAATTGATTATTCTGACAAGTTATTGAGGCTTAAATAGCTAAGTTTATATGACCTGTAAAGGAAAGGAAATCAAAACAAATAAATACCTAATTAAAATAGGAGTAAATCAAGCTACCTACTATATTTGCCCATATGCTATAAAATAGTTCTAGGACTCTTAACACCCCTTCAAGCTGATGCATACAAAATTACAAATTAGATGTACCAAGCTTGTTTCATATATAACTCATTTGGGACCGGCTAAGGACTTGGTGAATGTGCCTGCAAGCTGATGATCAGTAGGCCTACAATTTGTCATCCATGTCTCTTCAAGAATATCAAGTGCATATTTCCTATGTGAGATGACAATTCTTGATTTGGATTGAGCAACCTCAATGCCCACGAAGTACCTCAATCGACCAAGATCCTTAGTCTGAAAGTGCTGGAAAAAGTGATGTCTGAATTTGGTAATTCCCTCATCATCATTACCTGTGATAAATGTGCCATAAATGTACACTTTCAAAAACATGCACAAACCTGGAGCAAAGTGACAATAGAACACAAAATGATCAGCTTCACTTCGTACCATGCCAAACTCCTGAATAGCCATGCTAAACTTTTCAAACCATGCCCGAGGAGACTGTTTGAAGCCACAAAGTGCTCGTTGTAGTCTCCATACCATGTTACTAACCTCCCTCAGAGCAACAAAACCAGATGGTTGTTTTATATATACCTCATCTTCGAGATCTCCATGAAAAAAGACATTTTTGATATACAACTGGTAGAGAGGCCAATGACGAACATTAACCATGGATAAAAAGATATGGACTGAAGTAATCTTGGCCACATGAGGGAAGATATCATCATTGTCAAGACCAAAAGTCTGTGTATAAACCTTGACCATTAGTTGAGTTGTCTGTCCATTGGGGCCTACCTTCATTGTATATACCCAACAACAACCAATTGTGGATTTATCTAGAGGTAGAGGAATAAGCTCCCAAGTACCACTAGATTGTAAGGCAGGCATCTCCTCAATCATAGCTTCTTGTTGGTCTGGATGAGAAAGAGCTTCACGTGTAGTCTTAGGAATAGACACAAAGGATGGTGATGATACAAAGGCAATATGGGTTGTTGGCAAACAATGATAGCTCAAACAAGTATAAATAGGATTAGGGTTACGAGTAGAGCAATTACCTTTTCGAGTGTCAGCGGAAGAACTCAGTGTAGACAAGTCCTCAGTAGGCAAGGATTTTGATGAAGGGTTTGAATCATTTGGGCGCGGACGACGATGATAGGTCAATAGTGGTGGAGGTGTAGAGGAGGAAGATGGAGTTATAGAAGATGAGGCGGAAGGGGAGACTATGGTGGGATCTCCAAAAGATGGAATTGGTAGAACCTCATTAATGCCTAATTTTTCAACAGAGGATGTAAAGTAGGGCTTACCTTCAAAAAAAGTAACATCAACGGACATAAGGTATCGCTGGAGGTGAGGTGAGAAACATCGGTATCCCTTCTCTACTTCTGAAAAACCAAGAAAGACACATTTAAGAGCACAAGGAGCTAATTTTTCTTTTTCTGGAGTGAGTGTATGGACAAAGCATGTGCTCCCAAAGACACGTGGTGGAAGAGAAAATAAGGTTGACTGGGGAAATAAAATAGAGTGTGGAACCTGATTTTGAATAGCAAAGGAAGGCATACGGTTAATCAGATAACAAGAGGTGAGCACTACATCCCCCCAAGATCCAATGGAACACTTGCTTGTATGAGAAGAGTGCGTGCAGTCTTAACAATATGACTATTTTTTCTCTTTGCAACCCTATTTTGTTGTGTAGTATAAGGACAAAATGTTTGATGAAGTATTCCACTGGACGACAGAAATTGTTTAAATTGAGATGATAAATATTCACGCGCATTATCACTACGAAAAGTGCGAATAGAAACACCAAATTGAGTTCTTACTTCAGCACAAAAAGTTTGAAATATGAAAGCTAATTCAGAAAGATCTTTCATTAAGAACACCCAAGTGTACCTTGAGTAATCATCAACGAAATGCTTAAAATTCAATGTAGAACTAATTCTACTAGGACCCCAAATATCATAATGAACTAAATGAAAAGGAGACTCCGCATAATTATTAGGACTACGTGAAAAAAAAAATTGGGTGTGCTTCCCTAGTTGACAGGACTCACAATCTAACTTAGACAATTTAGACAAGTTAGGTATCATCTTTTGAAGTTTGGATAAACTAGGGTGTCCCAATCGTCTGTGGATTAAATCTGGAGAGTCAGATATTGAACAAACTGTAGTGGATTCATGAGGATTAAGATAATAAAGTCCATTTGACTCATGCCCTTCTCCAATTATCCTTCCTGTACAGAGGTCTTGTATAACAAAGAAGTCACTAAAGAATGAGACGAAACAATTTAAAGTCTGAGCCAAACGACTTATTGACATGAGGCTAAAGAGACAACCAGGGACAAGAAGAACATTATTCAGAGTCAAGGAAGGTAAGGGATTGGCTTGACCGATTCCGGTTGCCTTGGTTTGAGAACCATTAGCTATCCTAATTGTGGGAAGGGACTGAGAGTAAATAATATCAGACAATACAAATTTGTCACCAGTAACGTGGGTAGCAGCGCCTGAGTCCATGACCCAACAACCATGTGTGGTGGATTGTGAGATACTAGTGGCAGGATTAACAGGATTACCATTTTTGGCAGCTATTGATGAAGATGTCTGCTTACTCGCCTGGTACTGAAGAAAGTCATTGTATTCTATCTCAGACAAAGAGACCAGTCGATTGGTTGGATTACCAGTGGATTCAGTTTGAGGGTTGCTGGAGCCCATTAATTTAGTGCCAAACATGTTGAATCCAAGAGAAATGAAAACAGATCTATCAGTGTCCAAAAAAAAACGTGAATTTCGGAAAAGCACCTGAAATATAGATTGGAAAAACTGCTTGTTGTCTCGCTGGAAAATTAGATCTGACCGCTGGAAAGTGATTGAAATTAGTAAAGAAATTAAATGGGTAGGGTCGGAATGTTGCAACGAATCTACTGAAAAAGGAATCTGCTGGAGAAGTGGTCGGAAAACATCAAGCGAGGATTCTGATTGTAACGGTGGTACTGATATATGCAAAGTACCCCTGGAGAATGTCGAAATTGTGGACTATGGAGGTTTTGCTGGAAAAACGCTCAACAATTTTGTTCCCTTACTTTATTCATGTTTTCTCACTAAAGAAAACTTTAATAAAGAATAAGAGTTTGAGAGAGAATTCACCTTGATTATTCCCACTAGCTATTGGGAATCAAGCTACCTACTATATACACACACACACACACACACACACACACTATAGAATATTCCATGATTTTAACACACTTTATCAAAAAATAAAAGAAGTAAAATGATGGCTCATTTATCACCACAAGCTTTTGATACTTACCATAGGATCCTCTTACTACTTCCAAGGCAAATGAGGCTCATTAAGTACTCATATCACTCCCCTTAGTAGGATAACTCCATGTACTCTTCATGCGTTCATCTTTACTTAAATGCATCTGAACTTATGGACCTAAATGTAGCAAATACATGTCAATTTTCTATATTTGGCATATTCTTTCCTTCTACATAAAATGGATTTTCTTTCCAAAGTGCATTCTTCTGCTAATTTGGTGAATATCAAGGCTTGTATTTATTTATCCATGATATATCTGGCATGATTTACAGATTCCTGGGCTAGTAAATGTGGATTTTGCTGATGTGCGTGCTATTATGGCAAATGCTGGGTCTTCTTTAATGGGAATAGGAACTGCTACAGGTAAGCTCAAAAAGCCATTTGATAGTTGTTGGCACTAAGCCATTTCTCTTTGTTGGTTGCCTTTTAACTCATAATGTCATGTGATTTTAAAGTCTATGTGATGTGATGATGTGGCTTAATGAGACACACATACAGCCAACATGGCTAAATCATTATTTATGTGAACTTCACAATACATTGAATCAAAAAAATCTATGTATTGTTATTACTGATATAAAGGGCGTATGCAGCCTCACCCAAGGGTGTGCCCTAGAGGTCTCAGGTTCAATTCTCAGTGGAGCCAAATACATTAGGTTATATCTTTCCATCTGGACAAGCCGTGGTGGGAGTTCCCCTTTATATGTTCTGGTGGGAATTAGTAGGTACCCCGTGAAATTAGTTGAGATGTGCGCAACCTGGTGTGGACACTATGGTTATCACAAAAAATGAACATATGCAGCTGTCAGAATTTATCCATGGTGTCCAAATTTATGTGCTACTTATAAAAGTTATCCACTAAACTTAAATATTGTATTCTGTTGAAGTCTTGTGTAAAATATTAGTCACGCCTGTGCCTATCAGTACGTATTTTGCACCAGTTCCATTTTTCTTGTGCAAACGTCAAGTCCTTGACATATTTTAAGGTTTATAAGAACTGTAACAATCTAAACTGAAATAACAAATAAGCTCAAGGCTAATTTCCTGAGAAGTATTTGAGGTCGCGTATGCAGCCTTACCCAAGGGTGTGGCCTAGAGGTCTCAGGTTCAATTCTCAGTGGAGCCAAAAACATTAGGTTATTTCTTCCCATCTGTACAAGCTTGGTGGATAGAGTTCCCCAGTACTTGTGCTGGTGGGAATTAGTAGGTACCCTGTGGAATTAGTTGAGATGCGCGCAAACTGGTGGGGACACTCGGAGTTCTTTTTTCGTCTGTATAGAGCTTAGTGAAATGTGTAAGTTGAGGTGCAATGAAGGTCATGTTCAGTAGACAAAATGTTTTGCATTTCAACGAATTTCATTTATTAACGAAGAGAACTGGCTGCTGCAGATAACCGGAACAATTTTGTGTGATATTTCAGAATTTTCATGTAAGAAACGAAATATGTATCTGTTTCAATCAGTCGTGAGTGCACACAGAGAACATAAGAGAGCAAAGGAGGGGGTAGGATTCTTAAAGTCTCAATTAGTTTCTCGTATCAGTCCCTATAAATAAATGTGAGATTACCATAGGCCATAGGGATAGAGCAAATTATTTTTTCTGATGCTGCAGCAGATGGCGGAGCAGCCATCTGAAGATGGTTCCGGCAGCCGATGCGCCGTTTGCACCGCCACTCGCCCTTTCATCCTCCACTTTCTCCCCTTCAGAGGTCGCAACCGCCATCTTTGCACCGCCTGCATACTGGACTCCTACCCTGTCGGCTGTTCCTTCTGTCCCATCTGCTTTGATGTCTTCCTCCACAGCCCTCCTCCCCCTCACCTCCATCTCCGATGCTCAAAATGCATCTCTATCTCACACCTCTCTTGTATCTCTGATGCTGCTTCCTTCTCCCCTAGTTACTTGTGCCCTCCTTTTTCTAACCCTAATTTTCTTTCTTCCATATCACTCCGGATCCTGCTAATAATGCCATAGAATCAATCTCCATTTGGCTAACAGATTGTTGCCGCTGCTACCATTGCTTCTGAGTCTATCCACAATGTTGCTGATATGGCCTGGATTAACGCCGACATTAGGGTCCAAGAAGCTCTGTCAGCTAAGGCCGAAGCTGCCCAAGTTTTGGTTAAGCTAAAGAATTTGTTGGGCAACCAAGATCATTAGTTCGGTTCCAATTTCTCGTCCACACTTGTTTCTAATACTCCAGGTAACGACACAGGGGGGAAAAGATAAATTGAAGCAAAAGGATGATCCTCTCAATAGATGCAAATGATTGTGATACCCTTGATGATTAGATTAAGTAGTTTCAATTCTAAAACAATGCTTTATAAGATTTTTCTTTTTTTGTTGTGTGGCTACTGGCATCTAGCAACTTCTCTCTATTTTTGAATGCTCGGCTATTTCAGGGGATGCTTTTTGGCGAACAAAGGAATTGGAATTATTCATTCAACTATATCTCGCTTACTGTTAATGCCTCTCTTTCAATATCGAGTTTTATATAATCTTTGATTTTAATATGGTATGCTCAATTATATCTTTTTTGTTGTTGGAGTTCTCTTTGACACATCTTGGGCTTACTATCCAAGGTAGTGGAGAGTCTGACGATGATGTCACACATCATATTCGTGTTGGGTGGATGAAATGGGGGCTCACATTTGTAGTCTTGTGTTATAAGAAGGTGTCACCAAAACATAAATGCAAGTTCTATAGAGTGGTGTTAGACCAACTATGTTGTATGGAGCGGAGTATTGGTCAGTCAAGAACCCTCACGTCTAGAAGATGAAAGTTGCGAAAATGAGGATACTGAGATGGATGTGTGGGCTTACTAGGAGAGATATGAATAGAAATGGAGATATCTGGGTCAAGGTGGGAGTGGGCTCGATGGAGGACAAACTGCGGAAATAGAGACTGAGATGGTTTAGGATGTAAAGAGGAAATGTTGGATTCCCCAATACAGAGGTGTGAGAGGTTTGCTATGGATGGTTTCAAGAGAGGTAGAGGTAGGCTGAAGAAGAAGTACTCGTGAGAAGTGACGTGACGTGTCTCAGCGTTAAATTACCGAGGACATGACTTTAGATAAGACTTGGGAGACTATGAAGTACATATACCCTTCCAGACTAGTAGTTGTAGCATTCCTCTTGCAGTTTCTTGTTCTTCATTTTCTATTACTATCGGTTATTTCTTGTTCAATTATAGTATTATTTTGTCATGATACTGCTCCGTTTTTTTTTTGAGAACACTTGTCATACTATCTTTAGTATTTTGTCGTGGTTTCTTCACTTCTAGTACTTCTTTTACCAGACTACTTTGTTTCTTGAGCCGACGGTCTATTGAAAACAACCTCTCTACCTCCCAAGGTAGGGGTAAGGTTTGCGTACACATTATCCTCCCCAGACCTCACTGGTTGGATTACAGTGGCTATGCTATTGTCTTTTAGTAATGAAGAACTCTTCTATTTTAGTTTCTAACTTGGTGGGTAATGGACCCACTCATTTATAGTTCGTTTCTACTTTTTTTTTGTAGAAATTGGATTTATTGTTGATAAATGTTGTGCAAACTATACTCTCAAAGAAAAAGAAATGAAATTGTATTGTGATATTTAACTTCTGAATCATGCATGCTAATTTTTTATTACCGTGATGTCCTGGTCAACTTGCGTGCACCTCGATTATTTCCACAGGTACCTACTATGTCCCACCAACATAGGTACTGCTAAAAGAGGTAATATAGAGTACATTAGGGAGTTCACGTAGGTTTTATAGAACCAATACAAACTTATGCATGGTAGATCTACTATAGATGCGATATGTTATTTTTATTAAGAAGATTAATGGATTTTTTTTGGGGAGGATGAATGATCTCCACATTGCTTGACCTAGAAAAACCTTTTGTTGGAGAATTTGGGAAGGTAGGTCTTATATCAAATAAAATAAATAAATGCCACAAGTGTCACTTTAGAAAAAGTTATCAAAAGTGTGAAAATAGTGAACGAGGTGCAAAGTATTTTTGCCAAAACTAAAGGTTTATACTAGTGCTGGCAGAATTTACCCACTTTTTGATAACCCTCCCATATTTAAGCGGATTTGGGTGAGTGATGAACCCATTTTCAAACTGTAAAAAAGTTGGTCGGTCATGGGTCAAGTATGGGTTGCCTTCAATCAGCTATCGTGCATCACTCACAATTTCTTCAAATTGTTTTTGCTTCAGCAACAACTTTCTAGCATCTACTATTCAAATACTTTTTGCTTTTTAGACTTACAGTAAAGACTTCAGTAGATATGATTTCCTTGCCACTGTTAACAATATATGCTCTTATTTTTATATATAAAAATTATCCCAAACTAGCTATGTGTTGTTGTATAATTAAATGAATACAATAGTTAACTAGATATGTAAGAACAACAAATAAATACACATCCACTAACTTACGCTAACACACACACACACACAAAATTACCAGAATCATCAAGTTACGGTATTACTAGATTTTAAAAGAAACACAAAGTCAGTTATATAAGATGGGTACTTATTTTATCAACAAGACGAACAATTTACTCAAAAACTATTTTTATTTATTTTAAATGTCTACGATGAAAACACATTTTATACGAGCTCTTTTATATGGAAAATATGGTTATGTGACTGATCATATTGTCTTGAGTTCTTGAATTATTCCCAAGTAGATTAAAAAATATAATATTGTGATATAACAAAAGTGAATATCTAGTTTCACCGATACACTGTTACAAATTATTAAACATAACTGAAGATATTATTTGTTCCAAAACCACATACTATGTAATGTGGGTAAACCCATTTTCAACCCGCCCATTAATGACCCAATCCATTTTTTACCCGCATGATTGGGTATTGACCCATGTTTGCTCAACCCGTTTCCAACCCGCCCATTTGCCACCAACAGTTTATACCAAGAATCTTCCTTGAGTTCACTTTTATCCTTATGGTTGAGCTAACCAAATGAAGGGAGAGTGAAATCAACGAGGATCGTGGTGCCCACGTGCAGACAATTCAGATCTTTTGGTTCAGCGTGCTTCTGCTAAAAGAAACATTTTCCAACTGAAACACCACCATAAAGGTAGAGAAGCATGGGGTGGGGGGAGACTTTGGGCCTTCATGGAGGGAGAAAAGGGTTCCATATTCGTGGCTCGAGGTTGTGAGGGAGTTATAGCCTTTGATTCCAATATGCTATGAAGAGAAATCTAAAGAAAAATGGCAGCCCAGTGCACTAAGCTCCCGCCATGCACAAATCCGATGAAGGGCCGGACTACTAGGTGGGTTTATTATATGCAACCTTACATTGCATTTCTGAAAGAGGCAGTTTCCGCAGATCGTACCCGTGACATGATCCCCTTTAACCTAAGCAGACATCTGCATTGACATAAATAGCTGCTTGTAGAAATTTCGAATAGTGACCTAAAAAATTGAATGTAATCTAAAAAGTAACATCTTTATCTGCTGATGTTCCCGTTAGGGAAATTGGAAAATAAACTCTTTGGACTGGACACATCTGACATGTTTCTGTGAGTTTCCTCCTATTATTGGATGCTATTTGGCTGCAGATTTAAGATTTCTTTCAATTCAGTCACTTGCTGACAATAGTGATTGATGGTCCATTTCCTGCTGGACCCCTTCTTACTTCTGGCTTTATTCTTGCGAAAGGTAGAAACTGTGTGCATTTTTCTACGTTGTTTTGGCTATTTGATAATATTTCATGTCCAATGTACAACAACAACAACATCATATCCAGTGTAGTCCCACAAAGTGAGGTCTGAGGGAGGGTAGAGTGTATGCAGACCTTACCCCTACCTTCAGAGGTAGAGAGGTTGTCTTCAATTGACCCTTAGCTCAAGGAAAACAGTCCCCAAAAAAAGAAGTAATAGAAGTACAGAAAAGAACAAATAATAACAAAACTGCAACAAAACCATACGATAGTCGAGGTATTAAGGAATCAGCAGCTATTAACATCAATCAATGGACAAGAAACTATAGGAGAAAAACTACGACTACTAATATGAACGGATAGCAAGACAATGCACTACTACCTACTATCCTAATTCATGACCTCCACTCCCTCCCATCTAAGGTCATGCCCTCGGTAAGCTGAAACTGTGTTATGTCATGTCCAATGTAAAACACCTAAATCTCATCTGTAATATAGCAGGTTCGCATGCAAAATATGCATATCAAGATTTCAGATATGTATATCGTCCATGTATGGTTTTGTGCATCTCTCTAATAGTCGGATTTAGCATTGCTAACAAGTTTTTTTTTTTTGCAAGAATGGAGTGATATGTTGATGCTTCTACTAACTAGTCAAGAGGAAAATTGATATTATTCGTTGATATTACAGGAAAGACCAGAGCGAGAGATGCAGCATTGAACGCCATTCAATCTCCTCTGCTGG</genome_strand>
        <mrna_strand>AGACATGGTTTTTGTGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAATGGGTGGAGGAACAGGGACTGGTGCGGCTCCTATAATTGCAGGAACTGCCAAATCAATGGGTATCTTAACTGTTGGTATCGTTACAACCCCCTTTTCTTTTGAGGGACGAAGAAGAGCAGTTCAAGCCCAAGAAGGAATTGCAGCTTTGAGAGAAAATGTTGATACTCTGATTGTCATTCCAAATGACAAATTATTGACAGCTGTTTCTCCATCAACCCCAGTAACTGAAGCTTTTAACCTGGCTGATGATATTCTTCGGCAAGGAGTTCGTGGTATTTCTGATATAATTACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345772" ref_strand="+" ref_description="SGN-E345772 [cTOF-18-M21]">
      <seq>tagtagccaaaactctgtctttctctatatttcttcaaaatttcaaaggatttgtgcaattctctttttgggtttttgtctcttcaatttcaggtgctgaaagaaaaaactggactggaacttcagatattatctaggaggtcgattatattttttctggattaatcagaatagtttgagcttgagtttgggaatattctgttatggctacttgtacgtcagctgtatttatgcctcctgatacgcggcggtcacgaggggtcttgactgttcttggtggtagagtttgccccttgaaaattcaagatgagaagattggatacttgggcgttaaccaaaagggtacctcaagtttgcctcaattcaaatgttcagccagattcccagagtgtcaatcagtatcaaaacaaagacccctttctaaatttacatcccgaaatttctatgctcagaggcgaaggtaacaatacaatgactacctctagacaagaaagctctagtggaaatgtcagtgagagtttgatggattcatcaagctcgaacaattttaatgaggccaaaatcaaggtggttggtgtaggaggtgggtggatcaaatgcagttaatcgcatgattgagagctctatgaaaggtgtagagttttggattgtgaacacggatatccaagcaatgaggatgtcacctgtaaatcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="77407" stop="74488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77107" g_stop="77015" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77014" i_stop="75388" i_length="1627">
            <donor d_prob="0.094" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75387" g_stop="74788" g_length="600"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="695" r_length="602" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E345772" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77107" e_stop="77015"/>
          <exon e_start="75387" e_stop="74788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTAGCCAAAACTCTGTCTTTCTCTATATTTCTTCAAAATTTCAAAGGATTTGTGCAATTCTCTTTTTGGGTTTTTGTCTCTTCAATTTCAGGTGCCATTTTTGAAATGATAGGTTTGCCTTTGTTTTGAGAATCTTGATACAATCTATACAATTGTGAGGTGATTTATTCTTATGGGGTTTTTTGTGTAATGCTACTTAATAAAGACTGTAACTTTTTGTGTTCTATTGCATTTTCTCAATTTTTACAATTGTGAGGTTCTTTGTTCTTATGGGGTTGTTTTGTTTTTGGGTTTGTGTAATGCTATTTGATAAAGATTGCATTTTTTTACCTTCATGCTATTGAATTTTCTCAATCTATATGATTATGAGGTTCTTTATTCTTAAGGGTTGTTTTCTTTTTGGGTTTGTGTAATGGTATTTGATAAAGATTGTTTTTTTTTCTTCCTGCTATTGAATTTTCTCAATCTATACAGTTTGTGAGGTTTTTTGTGCTTATGGAGTTGTTTCTTTGTGGGTTTGTGTAATGTTATTTAATAAAGATTGTTTTCTTCTTCTTCATGCTATTGAATTTTCTCAATCTATACAGTTTGTGAGGTTTTTTGTGCTTATGGAGTTGTTTCTTTGTGGGTTTGTGTAATGTTAGTTAATAAAGATTGTTTTTTTCTTCTTCCTGCTATTGAATTTTTTCAATCTATACAATTGTGAGGTTCTTTATTCTTGTGTTTTTTTCTTTCTTGAGTTTGTGTAATGCTACTTGATAAAGATTGCATTTATTTTTCCTGTAATTGATGTTTCTCAATCTATATATTTGTGAGGTTCTTTATTCTTATGGGGTTGTTTTCTTTGTGGGTTTGTAAATGTTAATAAGCATTGTATTTTTTCTTCTTCCTGCTAATTGAATTTTCACAATTTTATACATTTGCGAGGTTCTTTATTCTTATGAGGTTGTTTCCTTTGTGGGTTTGTGTAATGCTCTACTTGATAAATATTGCCTTTTTCTTCCTGCTACTGTTTTTTTCAATCTATACACTTGTGAGGTTCTTTATTCTTATGCTGTTGTTTTCTTTTGGGGTTGTGTAATGCTACTTGATAAAGATGGTCTTTCTTTTTATGACAACGGAACCCACAACTGCTAAACTCAGTTCATGTGCAATAGCTCGCAAACCACACAAAAGATTTAAACTGCACTAGGCAACCTTGTGCGGTGAGCTTGACCTAGAAAGCAAGGGGTTTTGAACTTGAGACCTCCATTATGGGAATCCCAAGCCAAACCATCTAAGTTTTCTTCCAGCTATTGCATTTTCTCAAGCTATACAATTTTGAGGATCTTTATTCTTATGGGTTGTTTTCTTTTTGGGTTTGTGTAATGCTACTTGATAAGTATTGCCTTTTTCTTCCTGCTATTGCATTTTCTCAACCTATACAATTATAAGGTTCTTTATTCTTATGGAGTTAATTTCTTTTTGGGTTGGTGTAATGCTACTCAATAAAGATTGTCTTTTTTCTTCTAATTTCTGCTCTGCTGCTATTAGAGCTGTGTTAAACTTTGTGCTGTATTATACTCTCTAAATCTGAAAGTGTGGCACAGTTTTGGAGTTTGGTAACTCATACGTGTTAGTAAATTTAGATTTGCGGACTAGAACCCCCTTTATAGCTACCACTTACAAGCTTCTTTTAAACAATGTGCGCTGCTTTTTCCTGTTTTATTGATTGGCAGGTGCTGAAAGAAAAAACTGGACTGGAACTTCAGATATTATCTAGGAGGTCGATTATATTTTTTCTGGATTAATCAGAATAGTTTGAGCTTGAGTTTGGGAATATTCTGTTATGGCTACTTGTACGTCAGCTGTATTTATGCCTCCTGATACGCGGCGGTCACGAGGGGTCTTGACTGTTCTTGGTGGTAGAGTTTGCCCCTTGAAAATTCAAGATGAGAAGATTGGATACTTGGGCGTTAACCAAAAGGGTACCTCAAGTTTGCCTCAATTCAAATGTTCAGCCA-ATTCCCAGAGTGTCAATCAGTATCAAAACAAAGACCCCTTTCTAAATTTACATCCCGAAATTTCTATGCTCAGAGGCGAAGGTAACAATACAATGACTACCTCTAGACAAGAAAGCTCTAGTGGAAATGTCAGTGAGAGTTTGATGGATTCATCAAGCTCGAACAATTTTAATGAGGCCAAAATCAAGGTGGTTGGTGTAGGAGGT-GGTGGATCAAATGCAGTTAATCGCATGATTGAGAGCTCTATGAAGGGTGTAGAGTTTTGGATTGTGAACACGGATATCCAAGCAATGAGGATGTCACCTGTAAATCCTG</genome_strand>
        <mrna_strand>TAGTAGCCAAAACTCTGTCTTTCTCTATATTTCTTCAAAATTTCAAAGGATTTGTGCAATTCTCTTTTTGGGTTTTTGTCTCTTCAATTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGAAAGAAAAAACTGGACTGGAACTTCAGATATTATCTAGGAGGTCGATTATATTTTTTCTGGATTAATCAGAATAGTTTGAGCTTGAGTTTGGGAATATTCTGTTATGGCTACTTGTACGTCAGCTGTATTTATGCCTCCTGATACGCGGCGGTCACGAGGGGTCTTGACTGTTCTTGGTGGTAGAGTTTGCCCCTTGAAAATTCAAGATGAGAAGATTGGATACTTGGGCGTTAACCAAAAGGGTACCTCAAGTTTGCCTCAATTCAAATGTTCAGCCAGATTCCCAGAGTGTCAATCAGTATCAAAACAAAGACCCCTTTCTAAATTTACATCCCGAAATTTCTATGCTCAGAGGCGAAGGTAACAATACAATGACTACCTCTAGACAAGAAAGCTCTAGTGGAAATGTCAGTGAGAGTTTGATGGATTCATCAAGCTCGAACAATTTTAATGAGGCCAAAATCAAGGTGGTTGGTGTAGGAGGTGGGTGGATCAAATGCAGTTAATCGCATGATTGAGAGCTCTATGAAAGGTGTAGAGTTTTGGATTGTGAACACGGATATCCAAGCAATGAGGATGTCACCTGTAAATCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E329084" ref_strand="+" ref_description="SGN-E329084 [cTOC-24-L7]">
      <seq>tttttgtctcttcaatttcaggtgctgaaagaaaaaactggactggaacttcagatattatctaggaggtcgattatattttttctggattaatcagaatagtttgagcttgagtttgggaatattctgttatggctacttgtacgtcagctgtatttatgcctcctgatacgcggcggtcacgaggggtcttgactgttcttggtggtagagtttgccccttgaaaattcaagatgagaagattggatacttgggcgttaaccaaaagggtacctcaagtttgcctcaattcaaatgttcagccaattcccagagtgtcaatcagtatcaaaacaaagacccctttctaaatttacatcccgaaatttctatgctcagaggcgaaggtaacaatacaatgactacctctagacaagaaagctctagtggaaatgtcaatgaaagtttgatggattcatcagagctcgaacaattttaatgaggccaacatcaaggttggttggtgtaagaagcggtggatcaaatgcagtttatcgcatgattgaaagctctatgaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="75709" stop="74551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75387" g_stop="74851" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="560" r_length="539" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E329084" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75387" e_stop="74851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCTGAAAGAAAAAACTGGACTGGAACTTCAGATATTATCTAGGAGGTCGATTATATTTTTTCTGGATTAATCAGAATAGTTTGAGCTTGAGTTTGGGAATATTCTGTTATGGCTACTTGTACGTCAGCTGTATTTATGCCTCCTGATACGCGGCGGTCACGAGGGGTCTTGACTGTTCTTGGTGGTAGAGTTTGCCCCTTGAAAATTCAAGATGAGAAGATTGGATACTTGGGCGTTAACCAAAAGGGTACCTCAAGTTTGCCTCAATTCAAATGTTCAGCCAATTCCCAGAGTGTCAATCAGTATCAAAACAAAGACCCCTTTCTAAATTTACATCCCGAAATTTCTATGCTCAGAGGCGAAGGTAACAATACAATGACTACCTCTAGACAAGAAAGCTCTAGTGGAAATGTCAGTGAGAGTTTGATGGATTCATCA-AGCTCGAACAATTTTAATGAGGCCAAAATCAAGG-TGGTTGGTGTAGGAGGTGGTGGATCAAATGCAGTTAATCGCATGATTGAGAGCTCTATGAAGG</genome_strand>
        <mrna_strand>GTGCTGAAAGAAAAAACTGGACTGGAACTTCAGATATTATCTAGGAGGTCGATTATATTTTTTCTGGATTAATCAGAATAGTTTGAGCTTGAGTTTGGGAATATTCTGTTATGGCTACTTGTACGTCAGCTGTATTTATGCCTCCTGATACGCGGCGGTCACGAGGGGTCTTGACTGTTCTTGGTGGTAGAGTTTGCCCCTTGAAAATTCAAGATGAGAAGATTGGATACTTGGGCGTTAACCAAAAGGGTACCTCAAGTTTGCCTCAATTCAAATGTTCAGCCAATTCCCAGAGTGTCAATCAGTATCAAAACAAAGACCCCTTTCTAAATTTACATCCCGAAATTTCTATGCTCAGAGGCGAAGGTAACAATACAATGACTACCTCTAGACAAGAAAGCTCTAGTGGAAATGTCAATGAAAGTTTGATGGATTCATCAGAGCTCGAACAATTTTAATGAGGCCAACATCAAGGTTGGTTGGTGTAAGAAGCGGTGGATCAAATGCAGTTTATCGCATGATTGAAAGCTCTATGAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E366158" ref_strand="+" ref_description="SGN-E366158 [cLPT-1-A15]">
      <seq>ctttgttagctgaatacaacaccaccaatagtgctgaaagaaaaaactggactggaacttcagatattatctaggaggtcgattatattttttctggattaatcagaatagtttgagcttgagtttgggaaaattctgttatggctacttgtacgtcagctgtatttatgcctcctgatacgcggcggtcacgaggggtcttgactgttcttggtggtagagtttgccccttgaaaattcaagatgagaagattggatacttgggcgttaaccaaaaggatacctcaagtttgcctcaattcaaatgttcagccaattcccagagtgtcaatcagtatcaaaacaaagacccctttctaaatttacatcccgaaatttctatgctcagaggcgaaggtaacaatacaatgactacctctagacaagaaagctctagtggaaatgtcagtgagagtttgatggattcatcaagctcgaacaattttaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="-" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="77435" stop="74628"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77135" g_stop="77106" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77105" i_stop="75388" i_length="1718">
            <donor d_prob="0.467" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75387" g_stop="74928" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="490" r_length="460" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="-" ref_id="SGN-E366158" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E366158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77135" e_stop="77106"/>
          <exon e_start="75387" e_stop="74928"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGAGCTGAATACAACACCACCAATAGTAGCCAAAACTCTGTCTTTCTCTATATTTCTTCAAAATTTCAAAGGATTTGTGCAATTCTCTTTTTGGGTTTTTGTCTCTTCAATTTCAGGTGCCATTTTTGAAATGATAGGTTTGCCTTTGTTTTGAGAATCTTGATACAATCTATACAATTGTGAGGTGATTTATTCTTATGGGGTTTTTTGTGTAATGCTACTTAATAAAGACTGTAACTTTTTGTGTTCTATTGCATTTTCTCAATTTTTACAATTGTGAGGTTCTTTGTTCTTATGGGGTTGTTTTGTTTTTGGGTTTGTGTAATGCTATTTGATAAAGATTGCATTTTTTTACCTTCATGCTATTGAATTTTCTCAATCTATATGATTATGAGGTTCTTTATTCTTAAGGGTTGTTTTCTTTTTGGGTTTGTGTAATGGTATTTGATAAAGATTGTTTTTTTTTCTTCCTGCTATTGAATTTTCTCAATCTATACAGTTTGTGAGGTTTTTTGTGCTTATGGAGTTGTTTCTTTGTGGGTTTGTGTAATGTTATTTAATAAAGATTGTTTTCTTCTTCTTCATGCTATTGAATTTTCTCAATCTATACAGTTTGTGAGGTTTTTTGTGCTTATGGAGTTGTTTCTTTGTGGGTTTGTGTAATGTTAGTTAATAAAGATTGTTTTTTTCTTCTTCCTGCTATTGAATTTTTTCAATCTATACAATTGTGAGGTTCTTTATTCTTGTGTTTTTTTCTTTCTTGAGTTTGTGTAATGCTACTTGATAAAGATTGCATTTATTTTTCCTGTAATTGATGTTTCTCAATCTATATATTTGTGAGGTTCTTTATTCTTATGGGGTTGTTTTCTTTGTGGGTTTGTAAATGTTAATAAGCATTGTATTTTTTCTTCTTCCTGCTAATTGAATTTTCACAATTTTATACATTTGCGAGGTTCTTTATTCTTATGAGGTTGTTTCCTTTGTGGGTTTGTGTAATGCTCTACTTGATAAATATTGCCTTTTTCTTCCTGCTACTGTTTTTTTCAATCTATACACTTGTGAGGTTCTTTATTCTTATGCTGTTGTTTTCTTTTGGGGTTGTGTAATGCTACTTGATAAAGATGGTCTTTCTTTTTATGACAACGGAACCCACAACTGCTAAACTCAGTTCATGTGCAATAGCTCGCAAACCACACAAAAGATTTAAACTGCACTAGGCAACCTTGTGCGGTGAGCTTGACCTAGAAAGCAAGGGGTTTTGAACTTGAGACCTCCATTATGGGAATCCCAAGCCAAACCATCTAAGTTTTCTTCCAGCTATTGCATTTTCTCAAGCTATACAATTTTGAGGATCTTTATTCTTATGGGTTGTTTTCTTTTTGGGTTTGTGTAATGCTACTTGATAAGTATTGCCTTTTTCTTCCTGCTATTGCATTTTCTCAACCTATACAATTATAAGGTTCTTTATTCTTATGGAGTTAATTTCTTTTTGGGTTGGTGTAATGCTACTCAATAAAGATTGTCTTTTTTCTTCTAATTTCTGCTCTGCTGCTATTAGAGCTGTGTTAAACTTTGTGCTGTATTATACTCTCTAAATCTGAAAGTGTGGCACAGTTTTGGAGTTTGGTAACTCATACGTGTTAGTAAATTTAGATTTGCGGACTAGAACCCCCTTTATAGCTACCACTTACAAGCTTCTTTTAAACAATGTGCGCTGCTTTTTCCTGTTTTATTGATTGGCAGGTGCTGAAAGAAAAAACTGGACTGGAACTTCAGATATTATCTAGGAGGTCGATTATATTTTTTCTGGATTAATCAGAATAGTTTGAGCTTGAGTTTGGGAATATTCTGTTATGGCTACTTGTACGTCAGCTGTATTTATGCCTCCTGATACGCGGCGGTCACGAGGGGTCTTGACTGTTCTTGGTGGTAGAGTTTGCCCCTTGAAAATTCAAGATGAGAAGATTGGATACTTGGGCGTTAACCAAAAGGGTACCTCAAGTTTGCCTCAATTCAAATGTTCAGCCAATTCCCAGAGTGTCAATCAGTATCAAAACAAAGACCCCTTTCTAAATTTACATCCCGAAATTTCTATGCTCAGAGGCGAAGGTAACAATACAATGACTACCTCTAGACAAGAAAGCTCTAGTGGAAATGTCAGTGAGAGTTTGATGGATTCATCAAGCTCGAACAATTTTAATGA</genome_strand>
        <mrna_strand>CTTTGTTAGCTGAATACAACACCACCAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGAAAGAAAAAACTGGACTGGAACTTCAGATATTATCTAGGAGGTCGATTATATTTTTTCTGGATTAATCAGAATAGTTTGAGCTTGAGTTTGGGAAAATTCTGTTATGGCTACTTGTACGTCAGCTGTATTTATGCCTCCTGATACGCGGCGGTCACGAGGGGTCTTGACTGTTCTTGGTGGTAGAGTTTGCCCCTTGAAAATTCAAGATGAGAAGATTGGATACTTGGGCGTTAACCAAAAGGATACCTCAAGTTTGCCTCAATTCAAATGTTCAGCCAATTCCCAGAGTGTCAATCAGTATCAAAACAAAGACCCCTTTCTAAATTTACATCCCGAAATTTCTATGCTCAGAGGCGAAGGTAACAATACAATGACTACCTCTAGACAAGAAAGCTCTAGTGGAAATGTCAGTGAGAGTTTGATGGATTCATCAAGCTCGAACAATTTTAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E315914" ref_strand="+" ref_description="SGN-E315914 [cTOA-26-D7]">
      <seq>ggttatccaccggagtgacttgcctatgtagaggggccggaaatcttgggaactaagtcacctctcaatcgtcgaaattccttccaaatcttagatcccaaaaattatctccaccataggcccacctaatttcttggaccttcaattctccttgacatgacattctaaacaaattctgaagattatctttcagtgagttatctctacccaacctacgtcccgggaaattctctccttccattccaaccttgaatgagatacttttgctaaaatcatcccatcccttcattatgttcctccacaaaccgcacccaaaaggcataatgacatctctagttctcctaaatctgcttcccactagacaaataggtctgtagtcctccatgcaccatgctcctccctcttaggggtaatgacaactaatgaagcattcaaactcttttcaaatacaccacttccctggaagtcaacaactgtatctattaaatcagatctaaccattttcctgcagtgctcaaaaaaatccgtagaggcatcaggtgccagagctttgttactagcacaaccctctaccgccctcttcaactcttcctcctgaatttccctctctagccattcactctcctccctgccaatatgacgaaccctaaaccccccaatttaggcccccaatctgctacctctaacaaacgcttgtaaaaatctacaattgccttttctacttcctcccttttcacatgcatcacccatttaccttttccgactatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="84923" stop="86291"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85223" g_stop="85991" g_length="769"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="769" r_length="769" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E315914" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85223" e_stop="85991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTATCCACCGGAGTGACTTGCCTATGTAGAGGGGCCGGAAATCTTGGGAACTAAGTCACCTCTCAATCGTCGAAATTCCTTCCAAATCTTAGATCCCAAAAATTATCTCCACCATAGGCCCACCTAATTTCTTGGACCTTCAATTCTCCTTGACATGACATTCTAAACAAATTCTGAAGATTATCTTTCAGTGAGTTATCTCTACCCAACCTACGTCCCGGGAAATTCTCTCCTTCCATTCCAACCTTGAATGAGATACTTTTGCTAAAATCATCCCATCCCTTCATTATGTTCCTCCACAAACCGCACCCAAAAGGCATAATGACATCTCTAGTTCTCCTAAATCTGCTTCCCACTAGACAAATAGGTCTGTAGTCCTCCATGCACCATGCTCCTCCCTCTTAGGGGTAATGACAACTAATGAAGCATTCAAACTCTTTTCAAATACACCACTTCCCTGGAAGTCAACAACTGTATCTATTAAATCAGATCTAACCATTTTCCTGCAGTGCTCAAAAAAATCCGTAGAGGCATCAGGTGCCAGAGCTTTGTTACTAGCACAACCCTCTACCGCCCTCTTCAACTCTTCCTCCTGAATTTCCCTCTCTAGCCATTCACTCTCCTCCCTGCCAATATGACGAACCCTAAACCCCCCAATTTAGGCCCCCAATCTGCTACCTCTAACAAACGCTTGTAAAAATCTACAATTGCCTTTTCTACTTCCTCCTTTTCCACATGCATCACCCATTTACCTTTTCCGACTATAT</genome_strand>
        <mrna_strand>GGTTATCCACCGGAGTGACTTGCCTATGTAGAGGGGCCGGAAATCTTGGGAACTAAGTCACCTCTCAATCGTCGAAATTCCTTCCAAATCTTAGATCCCAAAAATTATCTCCACCATAGGCCCACCTAATTTCTTGGACCTTCAATTCTCCTTGACATGACATTCTAAACAAATTCTGAAGATTATCTTTCAGTGAGTTATCTCTACCCAACCTACGTCCCGGGAAATTCTCTCCTTCCATTCCAACCTTGAATGAGATACTTTTGCTAAAATCATCCCATCCCTTCATTATGTTCCTCCACAAACCGCACCCAAAAGGCATAATGACATCTCTAGTTCTCCTAAATCTGCTTCCCACTAGACAAATAGGTCTGTAGTCCTCCATGCACCATGCTCCTCCCTCTTAGGGGTAATGACAACTAATGAAGCATTCAAACTCTTTTCAAATACACCACTTCCCTGGAAGTCAACAACTGTATCTATTAAATCAGATCTAACCATTTTCCTGCAGTGCTCAAAAAAATCCGTAGAGGCATCAGGTGCCAGAGCTTTGTTACTAGCACAACCCTCTACCGCCCTCTTCAACTCTTCCTCCTGAATTTCCCTCTCTAGCCATTCACTCTCCTCCCTGCCAATATGACGAACCCTAAACCCCCCAATTTAGGCCCCCAATCTGCTACCTCTAACAAACGCTTGTAAAAATCTACAATTGCCTTTTCTACTTCCTCCCTTTTCACATGCATCACCCATTTACCTTTTCCGACTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E213960" ref_strand="+" ref_description="SGN-E213960 [cLEC-80-C18]">
      <seq>aatacaccacttccctggaagtcaacaactgtatctattaaatcagatctaaccattttcctgcagtgctcaaaaaaatccgtagaggcatcaggtgccagagctttgttactagcacaaccctctaccgccctcttcaactcttcctcctgaatttccctctctagccattcactctcctccctgccaatatgacgaaccctaaaccccccaatttaggcccccaatctgctacctctaacaaacgcttgtaaaaatctacaattgccttttctacttcctccttttccacatgcatcacccatttaccttttccgactatataaaagtccttctcctattagcagttactaccctatggaaatgttttttgttggagtccccctctacaaccattatgaccctcaagttctgtgtcaaaccaatctcttgggccaaagccaactcatctagctcccttttcaacccctctaaaattgttctttcctcaattattacaagactaatgacttaattcatgtgtaacttcgttcaaggcttcaagcttcaaatttgcgatgatcatcaaatggagaatattgccatctggttttttgttttagaggaggataaaaaagttggcaaatgggctattctagtggtatgacgtaagcaactttgaagaacttgaatgatattttatcaggtaacacctctgcccattcctttctcacgaaaagcactaaagcaattaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0076D18-M1gdQ/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0076D18.1" temp_strand="+" temp_description="C09HBa0076D18.1  EF647600.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0076D18 upload_account_name:spain">
        <position start="85368" stop="86702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85668" g_stop="86402" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="734" r_length="734" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0076D18.1" gen_strand="+" ref_id="SGN-E213960" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0076D18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E213960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85668" e_stop="86402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATACACCACTTCCCTGGAAGTCAACAACTGTATCTATTAAATCAGATCTAACCATTTTCCTGCAGTGCTCAAAAAAATCCGTAGAGGCATCAGGTGCCAGAGCTTTGTTACTAGCACAACCCTCTACCGCCCTCTTCAACTCTTCCTCCTGAATTTCCCTCTCTAGCCATTCACTCTCCTCCCTGCCAATATGACGAACCCTAAACCCCCCAATTTAGGCCCCCAATCTGCTACCTCTAACAAACGCTTGTAAAAATCTACAATTGCCTTTTCTACTTCCTCCTTTTCCACATGCATCACCCATTTACCTTTTCCGACTATATAAAAGTCCTTCTCCTATTAGCAGTTACTACCCTATGGAAATGTTTTTTGTTGGAGTCCCCCTCTACAACCATTATGACCCTCAAGTTCTGTGTCAAACCAATCTCTTGGGCCAAAGCCAACTCATCTAGCTCCCTTTTCAACCCCTCTAAAATTGTTCTTTCCTCAATTATTACAAGACTAATGACTTAATTCATGTGTAACTTCGTTCAAGGCTTCAAGCTTCAAATTTGCGATGATCATCAAATGGAGAATATTGCCATCTGGTTTTTTGTTTTAGAGGAGGATAAAAAAGTTGGCAAATGGGCTATTCTAGTGGTATGATGTAAGCAACTTTGAAGAACTTGAATGATATTTTATCAGGTAACACCTCTGCCAATTCCTTCTCAACGAAAAAGCACTAAAGCAATTAA</genome_strand>
        <mrna_strand>AATACACCACTTCCCTGGAAGTCAACAACTGTATCTATTAAATCAGATCTAACCATTTTCCTGCAGTGCTCAAAAAAATCCGTAGAGGCATCAGGTGCCAGAGCTTTGTTACTAGCACAACCCTCTACCGCCCTCTTCAACTCTTCCTCCTGAATTTCCCTCTCTAGCCATTCACTCTCCTCCCTGCCAATATGACGAACCCTAAACCCCCCAATTTAGGCCCCCAATCTGCTACCTCTAACAAACGCTTGTAAAAATCTACAATTGCCTTTTCTACTTCCTCCTTTTCCACATGCATCACCCATTTACCTTTTCCGACTATATAAAAGTCCTTCTCCTATTAGCAGTTACTACCCTATGGAAATGTTTTTTGTTGGAGTCCCCCTCTACAACCATTATGACCCTCAAGTTCTGTGTCAAACCAATCTCTTGGGCCAAAGCCAACTCATCTAGCTCCCTTTTCAACCCCTCTAAAATTGTTCTTTCCTCAATTATTACAAGACTAATGACTTAATTCATGTGTAACTTCGTTCAAGGCTTCAAGCTTCAAATTTGCGATGATCATCAAATGGAGAATATTGCCATCTGGTTTTTTGTTTTAGAGGAGGATAAAAAAGTTGGCAAATGGGCTATTCTAGTGGTATGACGTAAGCAACTTTGAAGAACTTGAATGATATTTTATCAGGTAACACCTCTGCCCATTCCTTTCTCACG-AAAAGCACTAAAGCAATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>67</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="937" PGL_stop="1539"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="937" e_stop="1539"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="937" e_stop="1539" e_length="603"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="937" stop="1531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1087" stop="1539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305692" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTATCTGATTTGCTTTTTGTGATATAGTTTGTTTAAGATACCACACTATCCAATGTAATTTAGTTCCTTAAGTGCCAGAGCTATTCAAGAAGGGCAACAATCTAAGCATCTCTTCAAATGAGCAATAGCTAAATGCTATGTTCAATGCAGGTTGGGTGCCCCGGTCATTCAAGTGGTGTTCTGTACAGTCAACAAGGCAGTACTATGTTTGTCTTGTTGCTCATTGACAAATTTAATATGGGTGTCAATTCTTTCAGTTTGTGGTCCTTTCAAGTGGACAAATCTTAAAAAAACAATATAATTGGCAAAGTGACATATTTATTATTATTATTTTTGAATTAGGAATATAGAATTAGAAAATTATAATTTTTTTGTTAAACTTGAATCGGAATCTTAACTGGGTGTTTCACTTAAGAATGGTGTTAACATCCTATGCATTTAGGATTGTCTTTTTGTGTTTACAGTTAACCATTGCATTTATATTTGTCATCTTTTAATCCATTTGCACCACCCTTCACTAACATTCACACTTCAAATATAAAACAAAACACATTCACACTTCAAATATATGCAAAAACAGAACACATTCACACTTAAAATTGC</gDNA_template>
            <first_frame> L  S  D  L  L  F  V  I  *  F  V  *  D  T  T  L  S  N  V  I  *  F  L  K  C  Q  S  Y  S  R  R  A  T  I  *  A  S  L  Q  M  S  N  S  *  M  L  C  S  M  Q  V  G  C  P  G  H  S  S  G  V  L  Y  S  Q  Q  G  S  T  M  F  V  L  L  L  I  D  K  F  N  M  G  V  N  S  F  S  L  W  S  F  Q  V  D  K  S  *  K  N  N  I  I  G  K  V  T  Y  L  L  L  L  F  L  N  *  E  Y  R  I  R  K  L  *  F  F  C  *  T  *  I  G  I  L  T  G  C  F  T  *  E  W  C  *  H  P  M  H  L  G  L  S  F  C  V  Y  S  *  P  L  H  L  Y  L  S  S  F  N  P  F  A  P  P  F  T  N  I  H  T  S  N  I  K  Q  N  T  F  T  L  Q  I  Y  A  K  T  E  H  I  H  T  *  N  C </first_frame>
            <second_frame>  Y  L  I  C  F  L  *  Y  S  L  F  K  I  P  H  Y  P  M  *  F  S  S  L  S  A  R  A  I  Q  E  G  Q  Q  S  K  H  L  F  K  *  A  I  A  K  C  Y  V  Q  C  R  L  G  A  P  V  I  Q  V  V  F  C  T  V  N  K  A  V  L  C  L  S  C  C  S  L  T  N  L  I  W  V  S  I  L  S  V  C  G  P  F  K  W  T  N  L  K  K  T  I  *  L  A  K  *  H  I  Y  Y  Y  Y  F  *  I  R  N  I  E  L  E  N  Y  N  F  F  V  K  L  E  S  E  S  *  L  G  V  S  L  K  N  G  V  N  I  L  C  I  *  D  C  L  F  V  F  T  V  N  H  C  I  Y  I  C  H  L  L  I  H  L  H  H  P  S  L  T  F  T  L  Q  I  *  N  K  T  H  S  H  F  K  Y  M  Q  K  Q  N  T  F  T  L  K  I   </second_frame>
            <third_frame>   I  *  F  A  F  C  D  I  V  C  L  R  Y  H  T  I  Q  C  N  L  V  P  *  V  P  E  L  F  K  K  G  N  N  L  S  I  S  S  N  E  Q  *  L  N  A  M  F  N  A  G  W  V  P  R  S  F  K  W  C  S  V  Q  S  T  R  Q  Y  Y  V  C  L  V  A  H  *  Q  I  *  Y  G  C  Q  F  F  Q  F  V  V  L  S  S  G  Q  I  L  K  K  Q  Y  N  W  Q  S  D  I  F  I  I  I  I  F  E  L  G  I  *  N  *  K  I  I  I  F  L  L  N  L  N  R  N  L  N  W  V  F  H  L  R  M  V  L  T  S  Y  A  F  R  I  V  F  L  C  L  Q  L  T  I  A  F  I  F  V  I  F  *  S  I  C  T  T  L  H  *  H  S  H  F  K  Y  K  T  K  H  I  H  T  S  N  I  C  K  N  R  T  H  S  H  L  K  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0076D18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="1961" PGL_stop="3012"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1961" e_stop="2006"/>
            <exon e_start="2722" e_stop="3012"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.960" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="1961" e_stop="2006" e_length="46"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.960">
            <gDNA_intron_boundary i_start="2007" i_stop="2721" i_length="715"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="2722" e_stop="3012" e_length="291"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1961" stop="2006"/>
              <exon start="2722" stop="3012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268561" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCACGTGATTGGTACCAAGATGGATTTTGTAGATGATAAATTGAG : GTCTGAGTTCATTTTTATTAATCCCAACTCGAAAGGGCAATGCGGTTGTGGTGAGTCTTTCATGACAACAGCCAGTAAAGGTGCTGAAAAGTGAGATGATTTTAATGAGACATGATGTTTATAATGTACTCATTAGGTAGGCGAACAATGAAATAAAGATTTATTCCCAGAATTAAAATGTTATATCTTATACATGTCTTTGTATTGTGTTTATTAGATGTAAAAAATTGCCAGTCTTGGCATTTGTATAATCTACTGATACTGATATTACAGAAATGGAAAGAGTAAAAT</gDNA_template>
            <first_frame> C  T  *  L  V  P  R  W  I  L  *  M  I  N  *   : G  L  S  S  F  L  L  I  P  T  R  K  G  N  A  V  V  V  S  L  S  *  Q  Q  P  V  K  V  L  K  S  E  M  I  L  M  R  H  D  V  Y  N  V  L  I  R  *  A  N  N  E  I  K  I  Y  S  Q  N  *  N  V  I  S  Y  T  C  L  C  I  V  F  I  R  C  K  K  L  P  V  L  A  F  V  *  S  T  D  T  D  I  T  E  M  E  R  V  K  </first_frame>
            <second_frame>  A  R  D  W  Y  Q  D  G  F  C  R  *  *  I  E  :  V  *  V  H  F  Y  *  S  Q  L  E  R  A  M  R  L  W  *  V  F  H  D  N  S  Q  *  R  C  *  K  V  R  *  F  *  *  D  M  M  F  I  M  Y  S  L  G  R  R  T  M  K  *  R  F  I  P  R  I  K  M  L  Y  L  I  H  V  F  V  L  C  L  L  D  V  K  N  C  Q  S  W  H  L  Y  N  L  L  I  L  I  L  Q  K  W  K  E  *  N </second_frame>
            <third_frame>   H  V  I  G  T  K  M  D  F  V  D  D  K  L  R :   S  E  F  I  F  I  N  P  N  S  K  G  Q  C  G  C  G  E  S  F  M  T  T  A  S  K  G  A  E  K  *  D  D  F  N  E  T  *  C  L  *  C  T  H  *  V  G  E  Q  *  N  K  D  L  F  P  E  L  K  C  Y  I  L  Y  M  S  L  Y  C  V  Y  *  M  *  K  I  A  S  L  G  I  C  I  I  Y  *  Y  *  Y  Y  R  N  G  K  S  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0076D18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="17550" PGL_stop="17909"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17550" e_stop="17909"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="17550" e_stop="17909" e_length="360"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17550" stop="17909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17550" stop="17909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354793" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCATTGCTATGTACATTTATGAGCCAATAATTCTTGGTAGAGAAACAAGTATTGACATATGGATTATGGAGAAAAATGGCTATTGGACTAAAAATATGAGAATTGGCCCTTTTTTAAATATCAAAAGATCAATTGGATATGGAAAAAATGGGGAAATTTTTCTTGAAGTTGTTACATATCAATTGGACATATTTGATCCTTTTTTAAAGAACAATAAGGTTCTTAGCCAACAAAAAAATGGCTACTCTTTGCAAGCTTTTGCTTACAATGAAAGCTTAGTTTCATTGAAAAATATTTCATTCTTGTAATTTAGTTGGTTAATGATATAAATGAAAATGATGGCTATAATTTAAATTCTA</gDNA_template>
            <first_frame> F  I  A  M  Y  I  Y  E  P  I  I  L  G  R  E  T  S  I  D  I  W  I  M  E  K  N  G  Y  W  T  K  N  M  R  I  G  P  F  L  N  I  K  R  S  I  G  Y  G  K  N  G  E  I  F  L  E  V  V  T  Y  Q  L  D  I  F  D  P  F  L  K  N  N  K  V  L  S  Q  Q  K  N  G  Y  S  L  Q  A  F  A  Y  N  E  S  L  V  S  L  K  N  I  S  F  L  *  F  S  W  L  M  I  *  M  K  M  M  A  I  I  *  I  L </first_frame>
            <second_frame>  S  L  L  C  T  F  M  S  Q  *  F  L  V  E  K  Q  V  L  T  Y  G  L  W  R  K  M  A  I  G  L  K  I  *  E  L  A  L  F  *  I  S  K  D  Q  L  D  M  E  K  M  G  K  F  F  L  K  L  L  H  I  N  W  T  Y  L  I  L  F  *  R  T  I  R  F  L  A  N  K  K  M  A  T  L  C  K  L  L  L  T  M  K  A  *  F  H  *  K  I  F  H  S  C  N  L  V  G  *  *  Y  K  *  K  *  W  L  *  F  K  F   </second_frame>
            <third_frame>   H  C  Y  V  H  L  *  A  N  N  S  W  *  R  N  K  Y  *  H  M  D  Y  G  E  K  W  L  L  D  *  K  Y  E  N  W  P  F  F  K  Y  Q  K  I  N  W  I  W  K  K  W  G  N  F  S  *  S  C  Y  I  S  I  G  H  I  *  S  F  F  K  E  Q  *  G  S  *  P  T  K  K  W  L  L  F  A  S  F  C  L  Q  *  K  L  S  F  I  E  K  Y  F  I  L  V  I  *  L  V  N  D  I  N  E  N  D  G  Y  N  L  N  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17550" stop="17858"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIAMYIYEPIILGRETSIDIWIMEKNGYWTKNMRIGPFLNIKRSIGYGKNGEIFLEVVTYQLDIFDPFLKNNKVLSQQKNGYSLQAFAYNESLVSLKNISFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="34118" PGL_stop="25685"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34088" e_stop="33988"/>
            <exon e_start="33350" e_stop="33139"/>
            <exon e_start="32813" e_stop="32546"/>
            <exon e_start="32202" e_stop="31665"/>
            <exon e_start="31114" e_stop="31098"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.791" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.436" e_score="0.996"/>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34088" e_stop="33988" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.997">
            <gDNA_intron_boundary i_start="33987" i_stop="33351" i_length="637"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="33350" e_stop="33139" e_length="212"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.791">
            <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="32813" e_stop="32546" e_length="268"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="32202" e_stop="31665" e_length="538"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.436">
            <gDNA_intron_boundary i_start="31664" i_stop="31115" i_length="550"/>
          </intron>
          <exon e_serial="5" e_score="0.941">
            <gDNA_exon_boundary e_start="31114" e_stop="31098" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34088" stop="33988"/>
              <exon start="33350" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33265" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33172" stop="33139"/>
              <exon start="32813" stop="32653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32772" stop="32546"/>
              <exon start="32202" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32741" stop="32546"/>
              <exon start="32202" stop="31854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32612" stop="32546"/>
              <exon start="32202" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32196" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397467" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32175" stop="31665"/>
              <exon start="31114" stop="31098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393014" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32163" stop="31775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32049" stop="31665"/>
              <exon start="31114" stop="31098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222472" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATGGTGTTCCTAGAGACCAAGCAAAACACAAATTTGTTTTCATCCATGGCTTTGATTGTGTCAGACATGATGTTGCTTTGCTCACAACTACTTCTCCT : GAGCTTATGCAAAGTTTGGGAATATATATTGTGTCAATTGATAGACCTGGTTATGGTGAAAGTGATCCTCATCCAAAAAGAACGCCAAAGACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAG : ATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGG : GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAACATTGTTTTTTTGATATCAATAACATTGTGTAATATTGGATTCTA : CAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> K  M  V  F  L  E  T  K  Q  N  T  N  L  F  S  S  M  A  L  I  V  S  D  M  M  L  L  C  S  Q  L  L  L  L :   S  L  C  K  V  W  E  Y  I  L  C  Q  L  I  D  L  V  M  V  K  V  I  L  I  Q  K  E  R  Q  R  L  *  L  L  I  *  R  N  *  L  I  N  W  N  *  D  L  S  F  M  L  S  D  F  L  W  V  D  K  L  F  G  A  F  S  S  I  F  L  T   : D  W  L  E  Q  F  F  *  H  P  *  L  T  T  G  G  V  V  F  L  Q  T  *  L  N  K  R  T  T  N  S  L  C  R  I  N  G  R  F  A  S  H  T  I  F  H  G  *  L  T  G  G  T  L  K  N  Y  F  L  L  P  A  L  Q  R  A  A  R  I  F  F  *  N  K  T  E  F  L  C  L  S  L  I  H  I  R  V  N  I  G :   T  W  *  D  S  K  G  S  T  S  P  S  I  A  T  *  *  *  V  S  G  H  G  N  L  I  R  W  N  *  K  T  H  S  I  T  G  K  G  P  F  T  S  G  K  A  M  K  T  G  M  Y  Q  S  F  Y  N  D  S  S  R  R  N  Y  H  G  F  T  I  M  K  *  K  V  E  V  I  C  F  H  G  L  K  E  W  E  I  K  L  *  R  H  F  Y  L  E  S  L  L  L  C  K  S  *  K  G  A  I  G  F  S  I  G  F  N  D  H  F  L  S  L  N  K  F  E  Y  F  V  D  N  Y  I  P  R  K  S  L  G  L  F  K  N  I  V  I  Y  L  H  V  S  R  I  F  Q  I  L  Y  I  F  E  E  F  D  *  H  C  F  F  D  I  N  N  I  V  *  Y  W  I  L  :  Q  K  K  K  K   </first_frame>
            <second_frame>  K  W  C  S  *  R  P  S  K  T  Q  I  C  F  H  P  W  L  *  L  C  Q  T  *  C  C  F  A  H  N  Y  F  S   : *  A  Y  A  K  F  G  N  I  Y  C  V  N  *  *  T  W  L  W  *  K  *  S  S  S  K  K  N  A  K  D  F  S  S  *  Y  R  G  I  S  *  S  I  G  I  R  I  *  V  L  C  Y  R  I  F  Y  G  W  T  S  C  L  G  P  S  Q  V  Y  S  S  Q  :  I  G  W  S  N  S  S  N  T  R  N  *  L  L  V  G  *  F  S  C  K  L  D  *  T  S  V  L  R  T  A  C  A  G  S  M  D  A  S  H  R  T  L  F  S  M  A  D  L  L  V  E  H  S  K  I  I  S  F  F  Q  R  C  N  G  Q  R  G  Y  S  F  R  T  R  Q  S  S  Y  A  Y  L  *  F  I  S  E  *  I  S   : G  L  G  K  T  A  R  G  V  R  V  H  P  S  R  P  N  D  R  F  R  D  M  G  I  *  S  D  G  T  R  K  P  I  P  *  R  G  R  V  R  S  H  L  A  R  R  *  R  R  A  C  T  S  H  S  T  T  I  H  R  E  E  T  T  M  D  S  L  S  *  N  E  R  W  R  S  Y  V  S  M  G  *  R  N  G  R  *  S  Y  E  D  I  F  T  W  R  A  F  C  Y  V  K  A  K  K  G  L  L  V  L  V  L  D  S  T  I  I  F  C  H  *  T  N  L  N  I  L  L  I  I  I  S  H  V  S  R  W  D  S  S  K  I  L  L  Y  T  C  M  *  V  G  S  S  K  Y  F  T  F  L  K  S  S  I  N  I  V  F  L  I  S  I  T  L  C  N  I  G  F  Y :   K  K  K  K  K  </second_frame>
            <third_frame>   N  G  V  P  R  D  Q  A  K  H  K  F  V  F  I  H  G  F  D  C  V  R  H  D  V  A  L  L  T  T  T  S  P  :  E  L  M  Q  S  L  G  I  Y  I  V  S  I  D  R  P  G  Y  G  E  S  D  P  H  P  K  R  T  P  K  T  L  A  L  D  I  E  E  L  A  D  Q  L  E  L  G  S  K  F  Y  V  I  G  F  S  M  G  G  Q  A  V  W  G  L  L  K  Y  I  P  H  R :   L  A  G  A  I  L  L  T  P  V  T  N  Y  W  W  G  S  F  P  A  N  L  T  K  Q  A  Y  Y  E  Q  L  V  Q  D  Q  W  T  L  R  I  A  H  Y  F  P  W  L  T  Y  W  W  N  T  Q  K  L  F  P  S  S  S  V  A  T  G  S  E  D  I  L  L  E  Q  D  R  V  L  M  P  I  F  D  S  Y  Q  S  K  Y  R  :  D  L  V  R  Q  Q  G  E  Y  E  S  I  H  R  D  L  M  I  G  F  G  T  W  E  F  D  P  M  E  L  E  N  P  F  H  N  G  E  G  S  V  H  I  W  Q  G  D  E  D  G  H  V  P  V  I  L  Q  R  F  I  A  K  K  L  P  W  I  H  Y  H  E  M  K  G  G  G  H  M  F  P  W  A  E  G  M  G  D  K  V  M  K  T  F  L  L  G  E  P  F  V  M  *  K  L  K  R  G  Y  W  F  *  Y  W  I  Q  R  S  F  F  V  I  E  Q  I  *  I  F  C  *  *  L  Y  P  T  *  V  V  G  T  L  Q  K  Y  C  Y  I  L  A  C  K  S  D  L  P  N  T  L  H  F  *  R  V  R  L  T  L  F  F  *  Y  Q  *  H  C  V  I  L  D  S   : T  K  K  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34086" stop="33988"/>
                    <exon start="33350" stop="33139"/>
                    <exon start="32813" stop="32546"/>
                    <exon start="32202" stop="31897"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>882</number_coding_nucleotides>
                  <number_encoded_amino_acids>294</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NGVPRDQAKHKFVFIHGFDCVRHDVALLTTTSPELMQSLGIYIVSIDRPGYGESDPHPKRTPKTLALDIEELADQLELGSKFYVIGFSMGGQAVWGLLKYIPHRLAGAILLTPVTNYWWGSFPANLTKQAYYEQLVQDQWTLRIAHYFPWLTYWWNTQKLFPSSSVATGSEDILLEQDRVLMPIFDSYQSKYRDLVRQQGEYESIHRDLMIGFGTWEFDPMELENPFHNGEGSVHIWQGDEDGHVPVILQRFIAKKLPWIHYHEMKGGGHMFPWAEGMGDKVMKTFLLGEPFVM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="34088" e_stop="33988"/>
            <exon e_start="33350" e_stop="33139"/>
            <exon e_start="32813" e_stop="32546"/>
            <exon e_start="32202" e_stop="31762"/>
            <exon e_start="31114" e_stop="31086"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.791" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.655" acc_prob="0.436" e_score="0.997"/>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34088" e_stop="33988" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.997">
            <gDNA_intron_boundary i_start="33987" i_stop="33351" i_length="637"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="33350" e_stop="33139" e_length="212"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.791">
            <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="32813" e_stop="32546" e_length="268"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="32202" e_stop="31762" e_length="441"/>
          </exon>
          <intron i_serial="4" don_prob="0.655" acc_prob="0.436">
            <gDNA_intron_boundary i_start="31761" i_stop="31115" i_length="647"/>
          </intron>
          <exon e_serial="5" e_score="0.917">
            <gDNA_exon_boundary e_start="31114" e_stop="31086" e_length="29"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34088" stop="33988"/>
              <exon start="33350" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33265" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33172" stop="33139"/>
              <exon start="32813" stop="32653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32772" stop="32546"/>
              <exon start="32202" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32741" stop="32546"/>
              <exon start="32202" stop="31854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32612" stop="32546"/>
              <exon start="32202" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32196" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397467" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31762"/>
              <exon start="31114" stop="31086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392812" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31762"/>
              <exon start="31114" stop="31103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393015" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393014" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32163" stop="31775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298781" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATGGTGTTCCTAGAGACCAAGCAAAACACAAATTTGTTTTCATCCATGGCTTTGATTGTGTCAGACATGATGTTGCTTTGCTCACAACTACTTCTCCT : GAGCTTATGCAAAGTTTGGGAATATATATTGTGTCAATTGATAGACCTGGTTATGGTGAAAGTGATCCTCATCCAAAAAGAACGCCAAAGACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAG : ATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGG : GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTT : CAAAAAAAAAAAAAAAATGGCAACCAAGA</gDNA_template>
            <first_frame> K  M  V  F  L  E  T  K  Q  N  T  N  L  F  S  S  M  A  L  I  V  S  D  M  M  L  L  C  S  Q  L  L  L  L :   S  L  C  K  V  W  E  Y  I  L  C  Q  L  I  D  L  V  M  V  K  V  I  L  I  Q  K  E  R  Q  R  L  *  L  L  I  *  R  N  *  L  I  N  W  N  *  D  L  S  F  M  L  S  D  F  L  W  V  D  K  L  F  G  A  F  S  S  I  F  L  T   : D  W  L  E  Q  F  F  *  H  P  *  L  T  T  G  G  V  V  F  L  Q  T  *  L  N  K  R  T  T  N  S  L  C  R  I  N  G  R  F  A  S  H  T  I  F  H  G  *  L  T  G  G  T  L  K  N  Y  F  L  L  P  A  L  Q  R  A  A  R  I  F  F  *  N  K  T  E  F  L  C  L  S  L  I  H  I  R  V  N  I  G :   T  W  *  D  S  K  G  S  T  S  P  S  I  A  T  *  *  *  V  S  G  H  G  N  L  I  R  W  N  *  K  T  H  S  I  T  G  K  G  P  F  T  S  G  K  A  M  K  T  G  M  Y  Q  S  F  Y  N  D  S  S  R  R  N  Y  H  G  F  T  I  M  K  *  K  V  E  V  I  C  F  H  G  L  K  E  W  E  I  K  L  *  R  H  F  Y  L  E  S  L  L  L  C  K  S  *  K  G  A  I  G  F  S  I  G  F  N  D  H  F  L  S  L  N  K  F  E  Y  F  V  D  N  Y  I  P  R  K  S  L  G  L  F  K  N  I  V  I  Y  F :   K  K  K  K  K  M  A  T  K  </first_frame>
            <second_frame>  K  W  C  S  *  R  P  S  K  T  Q  I  C  F  H  P  W  L  *  L  C  Q  T  *  C  C  F  A  H  N  Y  F  S   : *  A  Y  A  K  F  G  N  I  Y  C  V  N  *  *  T  W  L  W  *  K  *  S  S  S  K  K  N  A  K  D  F  S  S  *  Y  R  G  I  S  *  S  I  G  I  R  I  *  V  L  C  Y  R  I  F  Y  G  W  T  S  C  L  G  P  S  Q  V  Y  S  S  Q  :  I  G  W  S  N  S  S  N  T  R  N  *  L  L  V  G  *  F  S  C  K  L  D  *  T  S  V  L  R  T  A  C  A  G  S  M  D  A  S  H  R  T  L  F  S  M  A  D  L  L  V  E  H  S  K  I  I  S  F  F  Q  R  C  N  G  Q  R  G  Y  S  F  R  T  R  Q  S  S  Y  A  Y  L  *  F  I  S  E  *  I  S   : G  L  G  K  T  A  R  G  V  R  V  H  P  S  R  P  N  D  R  F  R  D  M  G  I  *  S  D  G  T  R  K  P  I  P  *  R  G  R  V  R  S  H  L  A  R  R  *  R  R  A  C  T  S  H  S  T  T  I  H  R  E  E  T  T  M  D  S  L  S  *  N  E  R  W  R  S  Y  V  S  M  G  *  R  N  G  R  *  S  Y  E  D  I  F  T  W  R  A  F  C  Y  V  K  A  K  K  G  L  L  V  L  V  L  D  S  T  I  I  F  C  H  *  T  N  L  N  I  L  L  I  I  I  S  H  V  S  R  W  D  S  S  K  I  L  L  Y  T   : S  K  K  K  K  K  W  Q  P  R </second_frame>
            <third_frame>   N  G  V  P  R  D  Q  A  K  H  K  F  V  F  I  H  G  F  D  C  V  R  H  D  V  A  L  L  T  T  T  S  P  :  E  L  M  Q  S  L  G  I  Y  I  V  S  I  D  R  P  G  Y  G  E  S  D  P  H  P  K  R  T  P  K  T  L  A  L  D  I  E  E  L  A  D  Q  L  E  L  G  S  K  F  Y  V  I  G  F  S  M  G  G  Q  A  V  W  G  L  L  K  Y  I  P  H  R :   L  A  G  A  I  L  L  T  P  V  T  N  Y  W  W  G  S  F  P  A  N  L  T  K  Q  A  Y  Y  E  Q  L  V  Q  D  Q  W  T  L  R  I  A  H  Y  F  P  W  L  T  Y  W  W  N  T  Q  K  L  F  P  S  S  S  V  A  T  G  S  E  D  I  L  L  E  Q  D  R  V  L  M  P  I  F  D  S  Y  Q  S  K  Y  R  :  D  L  V  R  Q  Q  G  E  Y  E  S  I  H  R  D  L  M  I  G  F  G  T  W  E  F  D  P  M  E  L  E  N  P  F  H  N  G  E  G  S  V  H  I  W  Q  G  D  E  D  G  H  V  P  V  I  L  Q  R  F  I  A  K  K  L  P  W  I  H  Y  H  E  M  K  G  G  G  H  M  F  P  W  A  E  G  M  G  D  K  V  M  K  T  F  L  L  G  E  P  F  V  M  *  K  L  K  R  G  Y  W  F  *  Y  W  I  Q  R  S  F  F  V  I  E  Q  I  *  I  F  C  *  *  L  Y  P  T  *  V  V  G  T  L  Q  K  Y  C  Y  I  L  :  Q  K  K  K  K  N  G  N  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34086" stop="33988"/>
                    <exon start="33350" stop="33139"/>
                    <exon start="32813" stop="32546"/>
                    <exon start="32202" stop="31897"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>882</number_coding_nucleotides>
                  <number_encoded_amino_acids>294</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NGVPRDQAKHKFVFIHGFDCVRHDVALLTTTSPELMQSLGIYIVSIDRPGYGESDPHPKRTPKTLALDIEELADQLELGSKFYVIGFSMGGQAVWGLLKYIPHRLAGAILLTPVTNYWWGSFPANLTKQAYYEQLVQDQWTLRIAHYFPWLTYWWNTQKLFPSSSVATGSEDILLEQDRVLMPIFDSYQSKYRDLVRQQGEYESIHRDLMIGFGTWEFDPMELENPFHNGEGSVHIWQGDEDGHVPVILQRFIAKKLPWIHYHEMKGGGHMFPWAEGMGDKVMKTFLLGEPFVM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="34118" e_stop="33984"/>
            <exon e_start="33350" e_stop="33139"/>
            <exon e_start="32813" e_stop="32546"/>
            <exon e_start="32202" e_stop="31665"/>
            <exon e_start="31114" e_stop="31098"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.837" acc_prob="0.997" e_score="0.993"/>
          <exon-intron don_prob="0.997" acc_prob="0.791" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.436" e_score="0.996"/>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="34118" e_stop="33984" e_length="135"/>
          </exon>
          <intron i_serial="1" don_prob="0.837" acc_prob="0.997">
            <gDNA_intron_boundary i_start="33983" i_stop="33351" i_length="633"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="33350" e_stop="33139" e_length="212"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.791">
            <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="32813" e_stop="32546" e_length="268"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="32202" e_stop="31665" e_length="538"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.436">
            <gDNA_intron_boundary i_start="31664" i_stop="31115" i_length="550"/>
          </intron>
          <exon e_serial="5" e_score="0.941">
            <gDNA_exon_boundary e_start="31114" e_stop="31098" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34118" stop="33984"/>
              <exon start="33350" stop="33139"/>
              <exon start="32813" stop="32645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33265" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33172" stop="33139"/>
              <exon start="32813" stop="32653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32772" stop="32546"/>
              <exon start="32202" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32741" stop="32546"/>
              <exon start="32202" stop="31854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32612" stop="32546"/>
              <exon start="32202" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32196" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397467" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32175" stop="31665"/>
              <exon start="31114" stop="31098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393014" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32163" stop="31775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32049" stop="31665"/>
              <exon start="31114" stop="31098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222472" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCTGATGGGAGATATTTGGCATATAAAGAAAATGGTGTTCCTAGAGACCAAGCAAAACACAAATTTGTTTTCATCCATGGCTTTGATTGTGTCAGACATGATGTTGCTTTGCTCACAACTACTTCTCCTGTAT : GAGCTTATGCAAAGTTTGGGAATATATATTGTGTCAATTGATAGACCTGGTTATGGTGAAAGTGATCCTCATCCAAAAAGAACGCCAAAGACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAG : ATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGG : GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAACATTGTTTTTTTGATATCAATAACATTGTGTAATATTGGATTCTA : CAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> F  L  M  G  D  I  W  H  I  K  K  M  V  F  L  E  T  K  Q  N  T  N  L  F  S  S  M  A  L  I  V  S  D  M  M  L  L  C  S  Q  L  L  L  L  Y  :  E  L  M  Q  S  L  G  I  Y  I  V  S  I  D  R  P  G  Y  G  E  S  D  P  H  P  K  R  T  P  K  T  L  A  L  D  I  E  E  L  A  D  Q  L  E  L  G  S  K  F  Y  V  I  G  F  S  M  G  G  Q  A  V  W  G  L  L  K  Y  I  P  H  R :   L  A  G  A  I  L  L  T  P  V  T  N  Y  W  W  G  S  F  P  A  N  L  T  K  Q  A  Y  Y  E  Q  L  V  Q  D  Q  W  T  L  R  I  A  H  Y  F  P  W  L  T  Y  W  W  N  T  Q  K  L  F  P  S  S  S  V  A  T  G  S  E  D  I  L  L  E  Q  D  R  V  L  M  P  I  F  D  S  Y  Q  S  K  Y  R  :  D  L  V  R  Q  Q  G  E  Y  E  S  I  H  R  D  L  M  I  G  F  G  T  W  E  F  D  P  M  E  L  E  N  P  F  H  N  G  E  G  S  V  H  I  W  Q  G  D  E  D  G  H  V  P  V  I  L  Q  R  F  I  A  K  K  L  P  W  I  H  Y  H  E  M  K  G  G  G  H  M  F  P  W  A  E  G  M  G  D  K  V  M  K  T  F  L  L  G  E  P  F  V  M  *  K  L  K  R  G  Y  W  F  *  Y  W  I  Q  R  S  F  F  V  I  E  Q  I  *  I  F  C  *  *  L  Y  P  T  *  V  V  G  T  L  Q  K  Y  C  Y  I  L  A  C  K  S  D  L  P  N  T  L  H  F  *  R  V  R  L  T  L  F  F  *  Y  Q  *  H  C  V  I  L  D  S   : T  K  K  K  K  K </first_frame>
            <second_frame>  F  *  W  E  I  F  G  I  *  R  K  W  C  S  *  R  P  S  K  T  Q  I  C  F  H  P  W  L  *  L  C  Q  T  *  C  C  F  A  H  N  Y  F  S  C  M :   S  L  C  K  V  W  E  Y  I  L  C  Q  L  I  D  L  V  M  V  K  V  I  L  I  Q  K  E  R  Q  R  L  *  L  L  I  *  R  N  *  L  I  N  W  N  *  D  L  S  F  M  L  S  D  F  L  W  V  D  K  L  F  G  A  F  S  S  I  F  L  T   : D  W  L  E  Q  F  F  *  H  P  *  L  T  T  G  G  V  V  F  L  Q  T  *  L  N  K  R  T  T  N  S  L  C  R  I  N  G  R  F  A  S  H  T  I  F  H  G  *  L  T  G  G  T  L  K  N  Y  F  L  L  P  A  L  Q  R  A  A  R  I  F  F  *  N  K  T  E  F  L  C  L  S  L  I  H  I  R  V  N  I  G :   T  W  *  D  S  K  G  S  T  S  P  S  I  A  T  *  *  *  V  S  G  H  G  N  L  I  R  W  N  *  K  T  H  S  I  T  G  K  G  P  F  T  S  G  K  A  M  K  T  G  M  Y  Q  S  F  Y  N  D  S  S  R  R  N  Y  H  G  F  T  I  M  K  *  K  V  E  V  I  C  F  H  G  L  K  E  W  E  I  K  L  *  R  H  F  Y  L  E  S  L  L  L  C  K  S  *  K  G  A  I  G  F  S  I  G  F  N  D  H  F  L  S  L  N  K  F  E  Y  F  V  D  N  Y  I  P  R  K  S  L  G  L  F  K  N  I  V  I  Y  L  H  V  S  R  I  F  Q  I  L  Y  I  F  E  E  F  D  *  H  C  F  F  D  I  N  N  I  V  *  Y  W  I  L  :  Q  K  K  K  K   </second_frame>
            <third_frame>   S  D  G  R  Y  L  A  Y  K  E  N  G  V  P  R  D  Q  A  K  H  K  F  V  F  I  H  G  F  D  C  V  R  H  D  V  A  L  L  T  T  T  S  P  V   : *  A  Y  A  K  F  G  N  I  Y  C  V  N  *  *  T  W  L  W  *  K  *  S  S  S  K  K  N  A  K  D  F  S  S  *  Y  R  G  I  S  *  S  I  G  I  R  I  *  V  L  C  Y  R  I  F  Y  G  W  T  S  C  L  G  P  S  Q  V  Y  S  S  Q  :  I  G  W  S  N  S  S  N  T  R  N  *  L  L  V  G  *  F  S  C  K  L  D  *  T  S  V  L  R  T  A  C  A  G  S  M  D  A  S  H  R  T  L  F  S  M  A  D  L  L  V  E  H  S  K  I  I  S  F  F  Q  R  C  N  G  Q  R  G  Y  S  F  R  T  R  Q  S  S  Y  A  Y  L  *  F  I  S  E  *  I  S   : G  L  G  K  T  A  R  G  V  R  V  H  P  S  R  P  N  D  R  F  R  D  M  G  I  *  S  D  G  T  R  K  P  I  P  *  R  G  R  V  R  S  H  L  A  R  R  *  R  R  A  C  T  S  H  S  T  T  I  H  R  E  E  T  T  M  D  S  L  S  *  N  E  R  W  R  S  Y  V  S  M  G  *  R  N  G  R  *  S  Y  E  D  I  F  T  W  R  A  F  C  Y  V  K  A  K  K  G  L  L  V  L  V  L  D  S  T  I  I  F  C  H  *  T  N  L  N  I  L  L  I  I  I  S  H  V  S  R  W  D  S  S  K  I  L  L  Y  T  C  M  *  V  G  S  S  K  Y  F  T  F  L  K  S  S  I  N  I  V  F  L  I  S  I  T  L  C  N  I  G  F  Y :   K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34118" stop="33984"/>
                    <exon start="33350" stop="33139"/>
                    <exon start="32813" stop="32546"/>
                    <exon start="32202" stop="31897"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>918</number_coding_nucleotides>
                  <number_encoded_amino_acids>306</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLMGDIWHIKKMVFLETKQNTNLFSSMALIVSDMMLLCSQLLLLYELMQSLGIYIVSIDRPGYGESDPHPKRTPKTLALDIEELADQLELGSKFYVIGFSMGGQAVWGLLKYIPHRLAGAILLTPVTNYWWGSFPANLTKQAYYEQLVQDQWTLRIAHYFPWLTYWWNTQKLFPSSSVATGSEDILLEQDRVLMPIFDSYQSKYRDLVRQQGEYESIHRDLMIGFGTWEFDPMELENPFHNGEGSVHIWQGDEDGHVPVILQRFIAKKLPWIHYHEMKGGGHMFPWAEGMGDKVMKTFLLGEPFVM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="34088" e_stop="33988"/>
            <exon e_start="33350" e_stop="33139"/>
            <exon e_start="32813" e_stop="32546"/>
            <exon e_start="32202" e_stop="31709"/>
            <exon e_start="31114" e_stop="31098"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.791" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.436" e_score="0.996"/>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34088" e_stop="33988" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.997">
            <gDNA_intron_boundary i_start="33987" i_stop="33351" i_length="637"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="33350" e_stop="33139" e_length="212"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.791">
            <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="32813" e_stop="32546" e_length="268"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="32202" e_stop="31709" e_length="494"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.436">
            <gDNA_intron_boundary i_start="31708" i_stop="31115" i_length="594"/>
          </intron>
          <exon e_serial="5" e_score="0.941">
            <gDNA_exon_boundary e_start="31114" e_stop="31098" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34088" stop="33988"/>
              <exon start="33350" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33265" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33172" stop="33139"/>
              <exon start="32813" stop="32653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32772" stop="32546"/>
              <exon start="32202" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32743" stop="32546"/>
              <exon start="32202" stop="31709"/>
              <exon start="31114" stop="31098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377607" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32741" stop="32546"/>
              <exon start="32202" stop="31854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32612" stop="32546"/>
              <exon start="32202" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32196" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397467" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393014" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32163" stop="31775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298781" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATGGTGTTCCTAGAGACCAAGCAAAACACAAATTTGTTTTCATCCATGGCTTTGATTGTGTCAGACATGATGTTGCTTTGCTCACAACTACTTCTCCT : GAGCTTATGCAAAGTTTGGGAATATATATTGTGTCAATTGATAGACCTGGTTATGGTGAAAGTGATCCTCATCCAAAAAGAACGCCAAAGACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAG : ATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGG : GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTCGTTGGGACTCTTCAAAAATATTGTTATATACTTGCATGTAAGTCGGATCTTCCAAATACTTTACATTTTTGAAGAGTTCGATTAAC : CAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> K  M  V  F  L  E  T  K  Q  N  T  N  L  F  S  S  M  A  L  I  V  S  D  M  M  L  L  C  S  Q  L  L  L  L :   S  L  C  K  V  W  E  Y  I  L  C  Q  L  I  D  L  V  M  V  K  V  I  L  I  Q  K  E  R  Q  R  L  *  L  L  I  *  R  N  *  L  I  N  W  N  *  D  L  S  F  M  L  S  D  F  L  W  V  D  K  L  F  G  A  F  S  S  I  F  L  T   : D  W  L  E  Q  F  F  *  H  P  *  L  T  T  G  G  V  V  F  L  Q  T  *  L  N  K  R  T  T  N  S  L  C  R  I  N  G  R  F  A  S  H  T  I  F  H  G  *  L  T  G  G  T  L  K  N  Y  F  L  L  P  A  L  Q  R  A  A  R  I  F  F  *  N  K  T  E  F  L  C  L  S  L  I  H  I  R  V  N  I  G :   T  W  *  D  S  K  G  S  T  S  P  S  I  A  T  *  *  *  V  S  G  H  G  N  L  I  R  W  N  *  K  T  H  S  I  T  G  K  G  P  F  T  S  G  K  A  M  K  T  G  M  Y  Q  S  F  Y  N  D  S  S  R  R  N  Y  H  G  F  T  I  M  K  *  K  V  E  V  I  C  F  H  G  L  K  E  W  E  I  K  L  *  R  H  F  Y  L  E  S  L  L  L  C  K  S  *  K  G  A  I  G  F  S  I  G  F  N  D  H  F  L  S  L  N  K  F  E  Y  F  V  D  N  Y  I  P  R  K  S  L  G  L  F  K  N  I  V  I  Y  L  H  V  S  R  I  F  Q  I  L  Y  I  F  E  E  F  D  *   : P  K  K  K  K  K </first_frame>
            <second_frame>  K  W  C  S  *  R  P  S  K  T  Q  I  C  F  H  P  W  L  *  L  C  Q  T  *  C  C  F  A  H  N  Y  F  S   : *  A  Y  A  K  F  G  N  I  Y  C  V  N  *  *  T  W  L  W  *  K  *  S  S  S  K  K  N  A  K  D  F  S  S  *  Y  R  G  I  S  *  S  I  G  I  R  I  *  V  L  C  Y  R  I  F  Y  G  W  T  S  C  L  G  P  S  Q  V  Y  S  S  Q  :  I  G  W  S  N  S  S  N  T  R  N  *  L  L  V  G  *  F  S  C  K  L  D  *  T  S  V  L  R  T  A  C  A  G  S  M  D  A  S  H  R  T  L  F  S  M  A  D  L  L  V  E  H  S  K  I  I  S  F  F  Q  R  C  N  G  Q  R  G  Y  S  F  R  T  R  Q  S  S  Y  A  Y  L  *  F  I  S  E  *  I  S   : G  L  G  K  T  A  R  G  V  R  V  H  P  S  R  P  N  D  R  F  R  D  M  G  I  *  S  D  G  T  R  K  P  I  P  *  R  G  R  V  R  S  H  L  A  R  R  *  R  R  A  C  T  S  H  S  T  T  I  H  R  E  E  T  T  M  D  S  L  S  *  N  E  R  W  R  S  Y  V  S  M  G  *  R  N  G  R  *  S  Y  E  D  I  F  T  W  R  A  F  C  Y  V  K  A  K  K  G  L  L  V  L  V  L  D  S  T  I  I  F  C  H  *  T  N  L  N  I  L  L  I  I  I  S  H  V  S  R  W  D  S  S  K  I  L  L  Y  T  C  M  *  V  G  S  S  K  Y  F  T  F  L  K  S  S  I  N  :  Q  K  K  K  K   </second_frame>
            <third_frame>   N  G  V  P  R  D  Q  A  K  H  K  F  V  F  I  H  G  F  D  C  V  R  H  D  V  A  L  L  T  T  T  S  P  :  E  L  M  Q  S  L  G  I  Y  I  V  S  I  D  R  P  G  Y  G  E  S  D  P  H  P  K  R  T  P  K  T  L  A  L  D  I  E  E  L  A  D  Q  L  E  L  G  S  K  F  Y  V  I  G  F  S  M  G  G  Q  A  V  W  G  L  L  K  Y  I  P  H  R :   L  A  G  A  I  L  L  T  P  V  T  N  Y  W  W  G  S  F  P  A  N  L  T  K  Q  A  Y  Y  E  Q  L  V  Q  D  Q  W  T  L  R  I  A  H  Y  F  P  W  L  T  Y  W  W  N  T  Q  K  L  F  P  S  S  S  V  A  T  G  S  E  D  I  L  L  E  Q  D  R  V  L  M  P  I  F  D  S  Y  Q  S  K  Y  R  :  D  L  V  R  Q  Q  G  E  Y  E  S  I  H  R  D  L  M  I  G  F  G  T  W  E  F  D  P  M  E  L  E  N  P  F  H  N  G  E  G  S  V  H  I  W  Q  G  D  E  D  G  H  V  P  V  I  L  Q  R  F  I  A  K  K  L  P  W  I  H  Y  H  E  M  K  G  G  G  H  M  F  P  W  A  E  G  M  G  D  K  V  M  K  T  F  L  L  G  E  P  F  V  M  *  K  L  K  R  G  Y  W  F  *  Y  W  I  Q  R  S  F  F  V  I  E  Q  I  *  I  F  C  *  *  L  Y  P  T  *  V  V  G  T  L  Q  K  Y  C  Y  I  L  A  C  K  S  D  L  P  N  T  L  H  F  *  R  V  R  L  T :   K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34086" stop="33988"/>
                    <exon start="33350" stop="33139"/>
                    <exon start="32813" stop="32546"/>
                    <exon start="32202" stop="31897"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>882</number_coding_nucleotides>
                  <number_encoded_amino_acids>294</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NGVPRDQAKHKFVFIHGFDCVRHDVALLTTTSPELMQSLGIYIVSIDRPGYGESDPHPKRTPKTLALDIEELADQLELGSKFYVIGFSMGGQAVWGLLKYIPHRLAGAILLTPVTNYWWGSFPANLTKQAYYEQLVQDQWTLRIAHYFPWLTYWWNTQKLFPSSSVATGSEDILLEQDRVLMPIFDSYQSKYRDLVRQQGEYESIHRDLMIGFGTWEFDPMELENPFHNGEGSVHIWQGDEDGHVPVILQRFIAKKLPWIHYHEMKGGGHMFPWAEGMGDKVMKTFLLGEPFVM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="34088" e_stop="33988"/>
            <exon e_start="33350" e_stop="33139"/>
            <exon e_start="32813" e_stop="32546"/>
            <exon e_start="32202" e_stop="31795"/>
            <exon e_start="31126" e_stop="31099"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.791" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.549" e_score="0.948"/>
          <exon-only e_score="0.714"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34088" e_stop="33988" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.997">
            <gDNA_intron_boundary i_start="33987" i_stop="33351" i_length="637"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="33350" e_stop="33139" e_length="212"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.791">
            <gDNA_intron_boundary i_start="33138" i_stop="32814" i_length="325"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="32813" e_stop="32546" e_length="268"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="32545" i_stop="32203" i_length="343"/>
          </intron>
          <exon e_serial="4" e_score="0.948">
            <gDNA_exon_boundary e_start="32202" e_stop="31795" e_length="408"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.549">
            <gDNA_intron_boundary i_start="31794" i_stop="31127" i_length="668"/>
          </intron>
          <exon e_serial="5" e_score="0.714">
            <gDNA_exon_boundary e_start="31126" e_stop="31099" e_length="28"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34088" stop="33988"/>
              <exon start="33350" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33265" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33261" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="32119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33172" stop="33139"/>
              <exon start="32813" stop="32653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33158" stop="33139"/>
              <exon start="32813" stop="32546"/>
              <exon start="32202" stop="31795"/>
              <exon start="31126" stop="31099"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397343" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32772" stop="32546"/>
              <exon start="32202" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32741" stop="32546"/>
              <exon start="32202" stop="31854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32612" stop="32546"/>
              <exon start="32202" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32196" stop="31802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397467" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32164" stop="31824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393014" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATGGTGTTCCTAGAGACCAAGCAAAACACAAATTTGTTTTCATCCATGGCTTTGATTGTGTCAGACATGATGTTGCTTTGCTCACAACTACTTCTCCT : GAGCTTATGCAAAGTTTGGGAATATATATTGTGTCAATTGATAGACCTGGTTATGGTGAAAGTGATCCTCATCCAAAAAGAACGCCAAAGACTTTAGCTCTTGATATAGAGGAATTAGCTGATCAATTGGAATTAGGATCTAAGTTTTATGTTATCGGATTTTCTATGGGTGGACAAGCTGTTTGGGGCCTTCTCAAGTATATTCCTCACAG : ATTGGCTGGAGCAATTCTTCTAACACCCGTAACTAACTACTGGTGGGGTAGTTTTCCTGCAAACTTGACTAAACAAGCGTACTACGAACAGCTTGTGCAGGATCAATGGACGCTTCGCATCGCACACTATTTTCCATGGCTGACTTACTGGTGGAACACTCAAAAATTATTTCCTTCTTCCAGCGTTGCAACGGGCAGCGAGGATATTCTTTTAGAACAAGACAGAGTTCTTATGCCTATCTTTGATTCATATCAGAGTAAATATCGG : GACTTGGTAAGACAGCAAGGGGAGTACGAGTCCATCCATCGCGACCTAATGATAGGTTTCGGGACATGGGAATTTGATCCGATGGAACTAGAAAACCCATTCCATAACGGGGAAGGGTCCGTTCACATCTGGCAAGGCGATGAAGACGGGCATGTACCAGTCATTCTACAACGATTCATCGCGAAGAAACTACCATGGATTCACTATCATGAAATGAAAGGTGGAGGTCATATGTTTCCATGGGCTGAAGGAATGGGAGATAAAGTTATGAAGACATTTTTACTTGGAGAGCCTTTTGTTATGTAAAAGCTAAAAAGGGGCTATTGGTTTTAGTATTGGATTCAACGATCATTTTTTGTCATTGAACAAATTTGAATATTTTGTTGATAATTATATCCCACGTAAGTC : AACTTGATTCAGCAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> K  M  V  F  L  E  T  K  Q  N  T  N  L  F  S  S  M  A  L  I  V  S  D  M  M  L  L  C  S  Q  L  L  L  L :   S  L  C  K  V  W  E  Y  I  L  C  Q  L  I  D  L  V  M  V  K  V  I  L  I  Q  K  E  R  Q  R  L  *  L  L  I  *  R  N  *  L  I  N  W  N  *  D  L  S  F  M  L  S  D  F  L  W  V  D  K  L  F  G  A  F  S  S  I  F  L  T   : D  W  L  E  Q  F  F  *  H  P  *  L  T  T  G  G  V  V  F  L  Q  T  *  L  N  K  R  T  T  N  S  L  C  R  I  N  G  R  F  A  S  H  T  I  F  H  G  *  L  T  G  G  T  L  K  N  Y  F  L  L  P  A  L  Q  R  A  A  R  I  F  F  *  N  K  T  E  F  L  C  L  S  L  I  H  I  R  V  N  I  G :   T  W  *  D  S  K  G  S  T  S  P  S  I  A  T  *  *  *  V  S  G  H  G  N  L  I  R  W  N  *  K  T  H  S  I  T  G  K  G  P  F  T  S  G  K  A  M  K  T  G  M  Y  Q  S  F  Y  N  D  S  S  R  R  N  Y  H  G  F  T  I  M  K  *  K  V  E  V  I  C  F  H  G  L  K  E  W  E  I  K  L  *  R  H  F  Y  L  E  S  L  L  L  C  K  S  *  K  G  A  I  G  F  S  I  G  F  N  D  H  F  L  S  L  N  K  F  E  Y  F  V  D  N  Y  I  P  R  K  S :   T  *  F  S  K  K  K  K  K </first_frame>
            <second_frame>  K  W  C  S  *  R  P  S  K  T  Q  I  C  F  H  P  W  L  *  L  C  Q  T  *  C  C  F  A  H  N  Y  F  S   : *  A  Y  A  K  F  G  N  I  Y  C  V  N  *  *  T  W  L  W  *  K  *  S  S  S  K  K  N  A  K  D  F  S  S  *  Y  R  G  I  S  *  S  I  G  I  R  I  *  V  L  C  Y  R  I  F  Y  G  W  T  S  C  L  G  P  S  Q  V  Y  S  S  Q  :  I  G  W  S  N  S  S  N  T  R  N  *  L  L  V  G  *  F  S  C  K  L  D  *  T  S  V  L  R  T  A  C  A  G  S  M  D  A  S  H  R  T  L  F  S  M  A  D  L  L  V  E  H  S  K  I  I  S  F  F  Q  R  C  N  G  Q  R  G  Y  S  F  R  T  R  Q  S  S  Y  A  Y  L  *  F  I  S  E  *  I  S   : G  L  G  K  T  A  R  G  V  R  V  H  P  S  R  P  N  D  R  F  R  D  M  G  I  *  S  D  G  T  R  K  P  I  P  *  R  G  R  V  R  S  H  L  A  R  R  *  R  R  A  C  T  S  H  S  T  T  I  H  R  E  E  T  T  M  D  S  L  S  *  N  E  R  W  R  S  Y  V  S  M  G  *  R  N  G  R  *  S  Y  E  D  I  F  T  W  R  A  F  C  Y  V  K  A  K  K  G  L  L  V  L  V  L  D  S  T  I  I  F  C  H  *  T  N  L  N  I  L  L  I  I  I  S  H  V  S   : Q  L  D  S  A  K  K  K  K   </second_frame>
            <third_frame>   N  G  V  P  R  D  Q  A  K  H  K  F  V  F  I  H  G  F  D  C  V  R  H  D  V  A  L  L  T  T  T  S  P  :  E  L  M  Q  S  L  G  I  Y  I  V  S  I  D  R  P  G  Y  G  E  S  D  P  H  P  K  R  T  P  K  T  L  A  L  D  I  E  E  L  A  D  Q  L  E  L  G  S  K  F  Y  V  I  G  F  S  M  G  G  Q  A  V  W  G  L  L  K  Y  I  P  H  R :   L  A  G  A  I  L  L  T  P  V  T  N  Y  W  W  G  S  F  P  A  N  L  T  K  Q  A  Y  Y  E  Q  L  V  Q  D  Q  W  T  L  R  I  A  H  Y  F  P  W  L  T  Y  W  W  N  T  Q  K  L  F  P  S  S  S  V  A  T  G  S  E  D  I  L  L  E  Q  D  R  V  L  M  P  I  F  D  S  Y  Q  S  K  Y  R  :  D  L  V  R  Q  Q  G  E  Y  E  S  I  H  R  D  L  M  I  G  F  G  T  W  E  F  D  P  M  E  L  E  N  P  F  H  N  G  E  G  S  V  H  I  W  Q  G  D  E  D  G  H  V  P  V  I  L  Q  R  F  I  A  K  K  L  P  W  I  H  Y  H  E  M  K  G  G  G  H  M  F  P  W  A  E  G  M  G  D  K  V  M  K  T  F  L  L  G  E  P  F  V  M  *  K  L  K  R  G  Y  W  F  *  Y  W  I  Q  R  S  F  F  V  I  E  Q  I  *  I  F  C  *  *  L  Y  P  T  *  V  :  N  L  I  Q  Q  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34086" stop="33988"/>
                    <exon start="33350" stop="33139"/>
                    <exon start="32813" stop="32546"/>
                    <exon start="32202" stop="31897"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>882</number_coding_nucleotides>
                  <number_encoded_amino_acids>294</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NGVPRDQAKHKFVFIHGFDCVRHDVALLTTTSPELMQSLGIYIVSIDRPGYGESDPHPKRTPKTLALDIEELADQLELGSKFYVIGFSMGGQAVWGLLKYIPHRLAGAILLTPVTNYWWGSFPANLTKQAYYEQLVQDQWTLRIAHYFPWLTYWWNTQKLFPSSSVATGSEDILLEQDRVLMPIFDSYQSKYRDLVRQQGEYESIHRDLMIGFGTWEFDPMELENPFHNGEGSVHIWQGDEDGHVPVILQRFIAKKLPWIHYHEMKGGGHMFPWAEGMGDKVMKTFLLGEPFVM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="31246" e_stop="31014"/>
            <exon e_start="29532" e_stop="29273"/>
            <exon e_start="29191" e_stop="28980"/>
            <exon e_start="28287" e_stop="28023"/>
            <exon e_start="26171" e_stop="26113"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.976" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="31246" e_stop="31014" e_length="233"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.968">
            <gDNA_intron_boundary i_start="31013" i_stop="29533" i_length="1481"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29532" e_stop="29273" e_length="260"/>
          </exon>
          <intron i_serial="2" don_prob="0.973" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29272" i_stop="29192" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29191" e_stop="28980" e_length="212"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.992">
            <gDNA_intron_boundary i_start="28979" i_stop="28288" i_length="692"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28287" e_stop="28023" e_length="265"/>
          </exon>
          <intron i_serial="4" don_prob="0.945" acc_prob="0.976">
            <gDNA_intron_boundary i_start="28022" i_stop="26172" i_length="1851"/>
          </intron>
          <exon e_serial="5" e_score="0.983">
            <gDNA_exon_boundary e_start="26171" e_stop="26113" e_length="59"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31246" stop="31014"/>
              <exon start="29532" stop="29273"/>
              <exon start="29191" stop="29008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323317" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29524" stop="29273"/>
              <exon start="29191" stop="28980"/>
              <exon start="28287" stop="28038"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258427" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29524" stop="29273"/>
              <exon start="29191" stop="29001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29522" stop="29273"/>
              <exon start="29191" stop="29019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29507" stop="29273"/>
              <exon start="29191" stop="28980"/>
              <exon start="28287" stop="28073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214001" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29498" stop="29273"/>
              <exon start="29191" stop="28980"/>
              <exon start="28287" stop="28249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29424" stop="29273"/>
              <exon start="29191" stop="28980"/>
              <exon start="28287" stop="28222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205749" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29421" stop="29273"/>
              <exon start="29191" stop="28980"/>
              <exon start="28287" stop="28023"/>
              <exon start="26171" stop="26113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210660" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAGATTTCGAACAATTATTAAATCAGTGAGATGAGACTCAGATCTCTTCAACCTTCATTTTTGTATAATTTTTGTAAATCTACAGTGTGAATACAAAATTTGTAATTTCAAAATCAAGAACTTGATTCAGCAAAAAAAAAAAAAAAATGGCAACCAAGAAGATTTCAGCAGCTTCAGCTAGGGCTCATACTCGTAAAGCTAAGCAAAAAAGTTCTATTCCTTTTCCTTCTG : GGGCATTTGCGAAAATTCTTCTGGTTGTTTTGATTGGGTTATTAGCGTGGGGTTATCAAGCAACACGACCACCTCCCCCTAAGACCTGTGGATCCCCAGATGGCCCTCCCGTCACTGCACCTAGAATCAAACTTAGTGATGGAAGACACTTGGCTTACAAGGAGACTGGTGTACTTAGAGATAATGCAAAATATAAGATTGTATATATCCATGGGTACGATGGTTGTAGGCATGATGTTCCAATTAACATCCTCTCTCAA : GATGTCATCGAAAGTTTAGGAGTGTACATTGTTTCCTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAACGAACAGTCAAGAGCTTAGCTTTTGACATACAGGAGCTTGCTGATCAATTAGGTCTAGGATCGAAATTCTATGTTATGGGATTTTCAATGGGGGGACAGGCTGTTTGGACCTGTCTCAGATACATTCCTCACAG : GTTGGCAGGTGCTGCTCTTATTGCACCAGTTGTCAACTATTGGTGGCCTAGGTTTCCTGCTAATATGTCCCAAGAAGCATTCAACCTTCGACTTCCTCAAGACAAATGGACTCTTCGTGTTGCTCATTACCTTCCGTGGCTCACCTATTGGTGGAACACTCAGAAGTTCTTTCCTTCATGCAGTGCTGCAGGTCGCAACCCTGCAATTTTCTCTTCGAAGGACCTAGAGCTAGTTTCCAAGCAAAGTTCGAGCCAAGACTATCGT : GCACAGGTAAGACAACAAGGAGAATATGAATCCCTCCACCGCGACTTAATGATTGGATT</gDNA_template>
            <first_frame> K  R  F  R  T  I  I  K  S  V  R  *  D  S  D  L  F  N  L  H  F  C  I  I  F  V  N  L  Q  C  E  Y  K  I  C  N  F  K  I  K  N  L  I  Q  Q  K  K  K  K  N  G  N  Q  E  D  F  S  S  F  S  *  G  S  Y  S  *  S  *  A  K  K  F  Y  S  F  S  F  W :   G  I  C  E  N  S  S  G  C  F  D  W  V  I  S  V  G  L  S  S  N  T  T  T  S  P  *  D  L  W  I  P  R  W  P  S  R  H  C  T  *  N  Q  T  *  *  W  K  T  L  G  L  Q  G  D  W  C  T  *  R  *  C  K  I  *  D  C  I  Y  P  W  V  R  W  L  *  A  *  C  S  N  *  H  P  L  S   : R  C  H  R  K  F  R  S  V  H  C  F  L  *  Q  T  W  L  W  R  K  *  S  *  S  K  T  N  S  Q  E  L  S  F  *  H  T  G  A  C  *  S  I  R  S  R  I  E  I  L  C  Y  G  I  F  N  G  G  T  G  C  L  D  L  S  Q  I  H  S  S  Q  :  V  G  R  C  C  S  Y  C  T  S  C  Q  L  L  V  A  *  V  S  C  *  Y  V  P  R  S  I  Q  P  S  T  S  S  R  Q  M  D  S  S  C  C  S  L  P  S  V  A  H  L  L  V  E  H  S  E  V  L  S  F  M  Q  C  C  R  S  Q  P  C  N  F  L  F  E  G  P  R  A  S  F  Q  A  K  F  E  P  R  L  S   : C  T  G  K  T  T  R  R  I  *  I  P  P  P  R  L  N  D  W  I </first_frame>
            <second_frame>  K  D  F  E  Q  L  L  N  Q  *  D  E  T  Q  I  S  S  T  F  I  F  V  *  F  L  *  I  Y  S  V  N  T  K  F  V  I  S  K  S  R  T  *  F  S  K  K  K  K  K  M  A  T  K  K  I  S  A  A  S  A  R  A  H  T  R  K  A  K  Q  K  S  S  I  P  F  P  S   : G  A  F  A  K  I  L  L  V  V  L  I  G  L  L  A  W  G  Y  Q  A  T  R  P  P  P  P  K  T  C  G  S  P  D  G  P  P  V  T  A  P  R  I  K  L  S  D  G  R  H  L  A  Y  K  E  T  G  V  L  R  D  N  A  K  Y  K  I  V  Y  I  H  G  Y  D  G  C  R  H  D  V  P  I  N  I  L  S  Q  :  D  V  I  E  S  L  G  V  Y  I  V  S  F  D  R  P  G  Y  G  E  S  D  P  N  P  K  R  T  V  K  S  L  A  F  D  I  Q  E  L  A  D  Q  L  G  L  G  S  K  F  Y  V  M  G  F  S  M  G  G  Q  A  V  W  T  C  L  R  Y  I  P  H  R :   L  A  G  A  A  L  I  A  P  V  V  N  Y  W  W  P  R  F  P  A  N  M  S  Q  E  A  F  N  L  R  L  P  Q  D  K  W  T  L  R  V  A  H  Y  L  P  W  L  T  Y  W  W  N  T  Q  K  F  F  P  S  C  S  A  A  G  R  N  P  A  I  F  S  S  K  D  L  E  L  V  S  K  Q  S  S  S  Q  D  Y  R  :  A  Q  V  R  Q  Q  G  E  Y  E  S  L  H  R  D  L  M  I  G   </second_frame>
            <third_frame>   K  I  S  N  N  Y  *  I  S  E  M  R  L  R  S  L  Q  P  S  F  L  Y  N  F  C  K  S  T  V  *  I  Q  N  L  *  F  Q  N  Q  E  L  D  S  A  K  K  K  K  K  W  Q  P  R  R  F  Q  Q  L  Q  L  G  L  I  L  V  K  L  S  K  K  V  L  F  L  F  L  L  :  G  H  L  R  K  F  F  W  L  F  *  L  G  Y  *  R  G  V  I  K  Q  H  D  H  L  P  L  R  P  V  D  P  Q  M  A  L  P  S  L  H  L  E  S  N  L  V  M  E  D  T  W  L  T  R  R  L  V  Y  L  E  I  M  Q  N  I  R  L  Y  I  S  M  G  T  M  V  V  G  M  M  F  Q  L  T  S  S  L  K :   M  S  S  K  V  *  E  C  T  L  F  P  L  T  D  L  V  M  E  K  V  I  L  I  Q  N  E  Q  S  R  A  *  L  L  T  Y  R  S  L  L  I  N  *  V  *  D  R  N  S  M  L  W  D  F  Q  W  G  D  R  L  F  G  P  V  S  D  T  F  L  T   : G  W  Q  V  L  L  L  L  H  Q  L  S  T  I  G  G  L  G  F  L  L  I  C  P  K  K  H  S  T  F  D  F  L  K  T  N  G  L  F  V  L  L  I  T  F  R  G  S  P  I  G  G  T  L  R  S  S  F  L  H  A  V  L  Q  V  A  T  L  Q  F  S  L  R  R  T  *  S  *  F  P  S  K  V  R  A  K  T  I  V :   H  R  *  D  N  K  E  N  M  N  P  S  T  A  T  *  *  L  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31119" stop="31014"/>
                    <exon start="29532" stop="29273"/>
                    <exon start="29191" stop="28980"/>
                    <exon start="28287" stop="28023"/>
                    <exon start="26171" stop="26115"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>900</number_coding_nucleotides>
                  <number_encoded_amino_acids>300</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSKKKKKMATKKISAASARAHTRKAKQKSSIPFPSGAFAKILLVVLIGLLAWGYQATRPPPPKTCGSPDGPPVTAPRIKLSDGRHLAYKETGVLRDNAKYKIVYIHGYDGCRHDVPINILSQDVIESLGVYIVSFDRPGYGESDPNPKRTVKSLAFDIQELADQLGLGSKFYVMGFSMGGQAVWTCLRYIPHRLAGAALIAPVVNYWWPRFPANMSQEAFNLRLPQDKWTLRVAHYLPWLTYWWNTQKFFPSCSAAGRNPAIFSSKDLELVSKQSSSQDYRAQVRQQGEYESLHRDLMIG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="26388" e_stop="25685"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="26388" e_stop="25685" e_length="704"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26388" stop="25685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26388" stop="25686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542594" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26387" stop="25685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301185" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAAGTTGCTCATTGCATCTAGTCATGTTCTCACGCTTGCTTCTCGTTGTGTAGACCGTGCTTTCAAGGGAAGCAATTGTTTGACTAGGCTTAATGCCTTTGTCCGATAAGTTTGTATCGAAAACAGATAACTTAATTGGTGTTTCGTTTCCTAAAGTTTTGGATTTTCTTGTGCTGTTTGAGCTCACTGTTTCTATTACTCAACTCTCCTTTCAGGCACAGGTAAGACAACAAGGAGAATATGAATCCCTCCACCGCGACTTAATGATTGGATTCGGAACATGGGAATTCGATCCAATGGATCTTGAGAACCCGTTCCCTAACAATGAAGGTTCCGTTCACTTATGGCAAGGCGATGAGGATAGGCTCTCGCCCGTCACACTACAAAGGTACATTTCACAGCAATTACCATGGATCCAATATCATGAAATTCCAGGTGCTGGTCATTTGATTCCAATGATTGATGGAATTGGAGAGAAAATCTTCAAGACTCTTTTAACTGCGTAAACTCACCATTTTTATAGCTACGCGCAAGGTTTCATCTTGCACGTCGTGATGTGTTTTAAGTTGTCTACATATCTCTGGTTTTTGTCGATCGTTAAGTTTCATATTTTGATGTCAAAGAGTTTTGACTTTGAGAGAAATATTTTGTATTACAAATTCTTTTGTTTGTAATTAAGGATAGTGATATTTAAACATTTTT</gDNA_template>
            <first_frame> A  K  L  L  I  A  S  S  H  V  L  T  L  A  S  R  C  V  D  R  A  F  K  G  S  N  C  L  T  R  L  N  A  F  V  R  *  V  C  I  E  N  R  *  L  N  W  C  F  V  S  *  S  F  G  F  S  C  A  V  *  A  H  C  F  Y  Y  S  T  L  L  S  G  T  G  K  T  T  R  R  I  *  I  P  P  P  R  L  N  D  W  I  R  N  M  G  I  R  S  N  G  S  *  E  P  V  P  *  Q  *  R  F  R  S  L  M  A  R  R  *  G  *  A  L  A  R  H  T  T  K  V  H  F  T  A  I  T  M  D  P  I  S  *  N  S  R  C  W  S  F  D  S  N  D  *  W  N  W  R  E  N  L  Q  D  S  F  N  C  V  N  S  P  F  L  *  L  R  A  R  F  H  L  A  R  R  D  V  F  *  V  V  Y  I  S  L  V  F  V  D  R  *  V  S  Y  F  D  V  K  E  F  *  L  *  E  K  Y  F  V  L  Q  I  L  L  F  V  I  K  D  S  D  I  *  T  F   </first_frame>
            <second_frame>  Q  S  C  S  L  H  L  V  M  F  S  R  L  L  L  V  V  *  T  V  L  S  R  E  A  I  V  *  L  G  L  M  P  L  S  D  K  F  V  S  K  T  D  N  L  I  G  V  S  F  P  K  V  L  D  F  L  V  L  F  E  L  T  V  S  I  T  Q  L  S  F  Q  A  Q  V  R  Q  Q  G  E  Y  E  S  L  H  R  D  L  M  I  G  F  G  T  W  E  F  D  P  M  D  L  E  N  P  F  P  N  N  E  G  S  V  H  L  W  Q  G  D  E  D  R  L  S  P  V  T  L  Q  R  Y  I  S  Q  Q  L  P  W  I  Q  Y  H  E  I  P  G  A  G  H  L  I  P  M  I  D  G  I  G  E  K  I  F  K  T  L  L  T  A  *  T  H  H  F  Y  S  Y  A  Q  G  F  I  L  H  V  V  M  C  F  K  L  S  T  Y  L  W  F  L  S  I  V  K  F  H  I  L  M  S  K  S  F  D  F  E  R  N  I  L  Y  Y  K  F  F  C  L  *  L  R  I  V  I  F  K  H  F  </second_frame>
            <third_frame>   K  V  A  H  C  I  *  S  C  S  H  A  C  F  S  L  C  R  P  C  F  Q  G  K  Q  L  F  D  *  A  *  C  L  C  P  I  S  L  Y  R  K  Q  I  T  *  L  V  F  R  F  L  K  F  W  I  F  L  C  C  L  S  S  L  F  L  L  L  N  S  P  F  R  H  R  *  D  N  K  E  N  M  N  P  S  T  A  T  *  *  L  D  S  E  H  G  N  S  I  Q  W  I  L  R  T  R  S  L  T  M  K  V  P  F  T  Y  G  K  A  M  R  I  G  S  R  P  S  H  Y  K  G  T  F  H  S  N  Y  H  G  S  N  I  M  K  F  Q  V  L  V  I  *  F  Q  *  L  M  E  L  E  R  K  S  S  R  L  F  *  L  R  K  L  T  I  F  I  A  T  R  K  V  S  S  C  T  S  *  C  V  L  S  C  L  H  I  S  G  F  C  R  S  L  S  F  I  F  *  C  Q  R  V  L  T  L  R  E  I  F  C  I  T  N  S  F  V  C  N  *  G  *  *  Y  L  N  I  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26303" stop="25881"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>420</number_coding_nucleotides>
                  <number_encoded_amino_acids>140</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LGLMPLSDKFVSKTDNLIGVSFPKVLDFLVLFELTVSITQLSFQAQVRQQGEYESLHRDLMIGFGTWEFDPMDLENPFPNNEGSVHLWQGDEDRLSPVTLQRYISQQLPWIQYHEIPGAGHLIPMIDGIGEKIFKTLLTA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="31668" PGL_stop="32108"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31668" e_stop="32108"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="31668" e_stop="32108" e_length="441"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31668" stop="32108"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310575" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATCCAATATTACACAATGTTATTGATATCAAAAAAACAATGTTAATCGAACTCTTCAAAAATGTAAAGTATTTGGAAGATCCGACTTACATGCAAGTATATAACAATATTTTTGAAGAGTCCCAACGACTTACGTGGGATATAATTATCAACAAAATATTCAAATTTGTTCAATGACAAAAAATGATCGTTGAATCCAATACTAAAACCAATAGCCCCTTTTTAGCTTTTACATAACAAAAGGCTCTCCAAGTAAAAATGTCTTCATAACTTTATCTCCCATTCCTTCAGCCCATGGAAACATATGACCTCCACCTTTCATTTCATGATAGTGAATCCATGGTAGTTTCTTCGCGATGAATCGTTGTAGAATGACTGGTACATGCCCGTCTTCATCGCCTTGCCAGATGTGAACGGACCCTTCCCCGTTATGGAATGGGT</gDNA_template>
            <first_frame> N  P  I  L  H  N  V  I  D  I  K  K  T  M  L  I  E  L  F  K  N  V  K  Y  L  E  D  P  T  Y  M  Q  V  Y  N  N  I  F  E  E  S  Q  R  L  T  W  D  I  I  I  N  K  I  F  K  F  V  Q  *  Q  K  M  I  V  E  S  N  T  K  T  N  S  P  F  L  A  F  T  *  Q  K  A  L  Q  V  K  M  S  S  *  L  Y  L  P  F  L  Q  P  M  E  T  Y  D  L  H  L  S  F  H  D  S  E  S  M  V  V  S  S  R  *  I  V  V  E  *  L  V  H  A  R  L  H  R  L  A  R  C  E  R  T  L  P  R  Y  G  M  G </first_frame>
            <second_frame>  I  Q  Y  Y  T  M  L  L  I  S  K  K  Q  C  *  S  N  S  S  K  M  *  S  I  W  K  I  R  L  T  C  K  Y  I  T  I  F  L  K  S  P  N  D  L  R  G  I  *  L  S  T  K  Y  S  N  L  F  N  D  K  K  *  S  L  N  P  I  L  K  P  I  A  P  F  *  L  L  H  N  K  R  L  S  K  *  K  C  L  H  N  F  I  S  H  S  F  S  P  W  K  H  M  T  S  T  F  H  F  M  I  V  N  P  W  *  F  L  R  D  E  S  L  *  N  D  W  Y  M  P  V  F  I  A  L  P  D  V  N  G  P  F  P  V  M  E  W   </second_frame>
            <third_frame>   S  N  I  T  Q  C  Y  *  Y  Q  K  N  N  V  N  R  T  L  Q  K  C  K  V  F  G  R  S  D  L  H  A  S  I  *  Q  Y  F  *  R  V  P  T  T  Y  V  G  Y  N  Y  Q  Q  N  I  Q  I  C  S  M  T  K  N  D  R  *  I  Q  Y  *  N  Q  *  P  L  F  S  F  Y  I  T  K  G  S  P  S  K  N  V  F  I  T  L  S  P  I  P  S  A  H  G  N  I  *  P  P  P  F  I  S  *  *  *  I  H  G  S  F  F  A  M  N  R  C  R  M  T  G  T  C  P  S  S  S  P  C  Q  M  *  T  D  P  S  P  L  W  N  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0076D18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="34830" PGL_stop="36017"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34830" e_stop="34970"/>
            <exon e_start="35421" e_stop="36017"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34830" e_stop="34970" e_length="141"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="34971" i_stop="35420" i_length="450"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="35421" e_stop="36017" e_length="597"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34830" stop="34970"/>
              <exon start="35421" stop="35994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34910" stop="34970"/>
              <exon start="35421" stop="36001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349065" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34910" stop="34970"/>
              <exon start="35421" stop="36001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34918" stop="34970"/>
              <exon start="35421" stop="35989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203775" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34919" stop="34970"/>
              <exon start="35421" stop="35886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34939" stop="34970"/>
              <exon start="35421" stop="35966"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34939" stop="34970"/>
              <exon start="35421" stop="35966"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35772" stop="36017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35772" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAGATGCGTTCTTCAAAACAAGTGTACCTGATGTATATGCTGTGGGTGATGTTGCCACTTTTCCTTTGAAAATGTACAATGAGATTAGAAGAGTTGAACATGTTGATCATTCTCGCAAATCTGCTGAGCAGGCTGTCAAG : GCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATACTTCTATTCCCGCGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAATGTGGGTGAAACAGTGCTCTTTGGGGACGCTGATCCCAACTCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGATGGAAAGATCGTTGGTGCATTCCTCGAGAGTGGGTCACCTGAAGAGAACAAGGCAATTGCTAAGGTTGCAAAGGTTCAACCCCCTGCTACCTTGGATCAATTGGCACAGGAGGGCATCAGTTTTGCCTCAAAGATCTAATTTTTATACCTACTTTGGATTTTAAAACAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTTGTAATTGTTTGACATTTTTCATGGCTGTTTGATTGGTTTAAATATGATGTTTCTTCATCTGAGTTTAGTTGCAGAAGATCACCCTGTAAGGCATATATATTCATACCTTAAAGTGTGACATCTCTGTAAATAATGAATGTTAGAAGCAATGTGGTTTGTGAAAATATGAGCATCTATTTACTTGGATTAGCGCACACTTTGGTTATGCACATTT</gDNA_template>
            <first_frame> T  D  A  F  F  K  T  S  V  P  D  V  Y  A  V  G  D  V  A  T  F  P  L  K  M  Y  N  E  I  R  R  V  E  H  V  D  H  S  R  K  S  A  E  Q  A  V  K  :  A  I  F  A  S  E  Q  G  K  S  V  D  E  Y  D  Y  L  P  Y  F  Y  S  R  A  F  D  L  S  W  Q  F  Y  G  D  N  V  G  E  T  V  L  F  G  D  A  D  P  N  S  A  T  H  K  F  G  Q  Y  W  I  K  D  G  K  I  V  G  A  F  L  E  S  G  S  P  E  E  N  K  A  I  A  K  V  A  K  V  Q  P  P  A  T  L  D  Q  L  A  Q  E  G  I  S  F  A  S  K  I  *  F  L  Y  L  L  W  I  L  K  Q  L  F  E  V  S  A  L  F  T  M  L  *  L  F  D  I  F  H  G  C  L  I  G  L  N  M  M  F  L  H  L  S  L  V  A  E  D  H  P  V  R  H  I  Y  S  Y  L  K  V  *  H  L  C  K  *  *  M  L  E  A  M  W  F  V  K  I  *  A  S  I  Y  L  D  *  R  T  L  W  L  C  T  F </first_frame>
            <second_frame>  Q  M  R  S  S  K  Q  V  Y  L  M  Y  M  L  W  V  M  L  P  L  F  L  *  K  C  T  M  R  L  E  E  L  N  M  L  I  I  L  A  N  L  L  S  R  L  S  R :   Q  Y  L  P  V  S  K  G  S  L  S  M  N  M  T  T  F  H  T  S  I  P  A  P  S  I  C  L  G  N  S  T  V  I  M  W  V  K  Q  C  S  L  G  T  L  I  P  T  L  Q  L  T  S  L  D  N  T  G  S  K  M  E  R  S  L  V  H  S  S  R  V  G  H  L  K  R  T  R  Q  L  L  R  L  Q  R  F  N  P  L  L  P  W  I  N  W  H  R  R  A  S  V  L  P  Q  R  S  N  F  Y  T  Y  F  G  F  *  N  S  S  L  K  F  L  P  Y  L  Q  C  C  N  C  L  T  F  F  M  A  V  *  L  V  *  I  *  C  F  F  I  *  V  *  L  Q  K  I  T  L  *  G  I  Y  I  H  T  L  K  C  D  I  S  V  N  N  E  C  *  K  Q  C  G  L  *  K  Y  E  H  L  F  T  W  I  S  A  H  F  G  Y  A  H   </second_frame>
            <third_frame>   R  C  V  L  Q  N  K  C  T  *  C  I  C  C  G  *  C  C  H  F  S  F  E  N  V  Q  *  D  *  K  S  *  T  C  *  S  F  S  Q  I  C  *  A  G  C  Q   : G  N  I  C  Q  *  A  R  E  V  C  R  *  I  *  L  P  S  I  L  L  F  P  R  L  R  F  V  L  A  I  L  R  *  *  C  G  *  N  S  A  L  W  G  R  *  S  Q  L  C  N  S  Q  V  W  T  I  L  D  Q  R  W  K  D  R  W  C  I  P  R  E  W  V  T  *  R  E  Q  G  N  C  *  G  C  K  G  S  T  P  C  Y  L  G  S  I  G  T  G  G  H  Q  F  C  L  K  D  L  I  F  I  P  T  L  D  F  K  T  A  L  *  S  F  C  L  I  Y  N  V  V  I  V  *  H  F  S  W  L  F  D  W  F  K  Y  D  V  S  S  S  E  F  S  C  R  R  S  P  C  K  A  Y  I  F  I  P  *  S  V  T  S  L  *  I  M  N  V  R  S  N  V  V  C  E  N  M  S  I  Y  L  L  G  L  A  H  T  L  V  M  H  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34830" stop="34970"/>
                    <exon start="35421" stop="35741"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>459</number_coding_nucleotides>
                  <number_encoded_amino_acids>153</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TDAFFKTSVPDVYAVGDVATFPLKMYNEIRRVEHVDHSRKSAEQAVKAIFASEQGKSVDEYDYLPYFYSRAFDLSWQFYGDNVGETVLFGDADPNSATHKFGQYWIKDGKIVGAFLESGSPEENKAIAKVAKVQPPATLDQLAQEGISFASKI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34900" stop="34970"/>
                    <exon start="35421" stop="35766"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>414</number_coding_nucleotides>
                  <number_encoded_amino_acids>138</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KCTMRLEELNMLIILANLLSRLSRQYLPVSKGSLSMNMTTFHTSIPAPSICLGNSTVIMWVKQCSLGTLIPTLQLTSLDNTGSKMERSLVHSSRVGHLKRTRQLLRLQRFNPLLPWINWHRRASVLPQRSNFYTYFGF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="37332" PGL_stop="35518"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36305" e_stop="36267"/>
            <exon e_start="35983" e_stop="35518"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.590"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.590">
            <gDNA_exon_boundary e_start="36305" e_stop="36267" e_length="39"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="36266" i_stop="35984" i_length="283"/>
          </intron>
          <exon e_serial="2" e_score="0.968">
            <gDNA_exon_boundary e_start="35983" e_stop="35518" e_length="466"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36305" stop="36267"/>
              <exon start="35983" stop="35518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35973" stop="35595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282461" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35961" stop="35595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282347" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACATTAGACCGAAGACATTGTTTGCTTGGTTTGATTTCT : TAAATAGATGCTCATATTTTCACAAACCACATTGCTTCTAACATTCATTATTTACAGAGATGTCACACTTTAAGGTATGAATATATATGCCTTACAGGGTGATCTTCTGCAACTAAACTCAGATGAAGAAACATCATATTTAAACCAATCAAACAGCCATGAAAAATGTCAAACAATTACAACATTGTAAATAAGGCAGAAACTTCAAAGAGCTGTTTTAAAATCCAAAGTAGGTATAAAAATTAGATCTTTGAGGCAAAACTGATGCCCTCCTGTGCCAATTGATCCAAGGTAGCAGGGGGTTGAACCTTTGCAACCTTAGCAATTGCCTTGTTCTCTTCAGGTGACCCACTCTCGAGGAATGCACCAACGATCTTTCCATCTTTGATCCAGTATTGTCCAAACTTGTGAGTTGCAGAGTTGGGATCAGCGTCCCCAAAGAGCACTGTTTCACCCACATTATCAC</gDNA_template>
            <first_frame> T  L  D  R  R  H  C  L  L  G  L  I  S  :  *  I  D  A  H  I  F  T  N  H  I  A  S  N  I  H  Y  L  Q  R  C  H  T  L  R  Y  E  Y  I  C  L  T  G  *  S  S  A  T  K  L  R  *  R  N  I  I  F  K  P  I  K  Q  P  *  K  M  S  N  N  Y  N  I  V  N  K  A  E  T  S  K  S  C  F  K  I  Q  S  R  Y  K  N  *  I  F  E  A  K  L  M  P  S  C  A  N  *  S  K  V  A  G  G  *  T  F  A  T  L  A  I  A  L  F  S  S  G  D  P  L  S  R  N  A  P  T  I  F  P  S  L  I  Q  Y  C  P  N  L  *  V  A  E  L  G  S  A  S  P  K  S  T  V  S  P  T  L  S  </first_frame>
            <second_frame>  H  *  T  E  D  I  V  C  L  V  *  F  L :   K  *  M  L  I  F  S  Q  T  T  L  L  L  T  F  I  I  Y  R  D  V  T  L  *  G  M  N  I  Y  A  L  Q  G  D  L  L  Q  L  N  S  D  E  E  T  S  Y  L  N  Q  S  N  S  H  E  K  C  Q  T  I  T  T  L  *  I  R  Q  K  L  Q  R  A  V  L  K  S  K  V  G  I  K  I  R  S  L  R  Q  N  *  C  P  P  V  P  I  D  P  R  *  Q  G  V  E  P  L  Q  P  *  Q  L  P  C  S  L  Q  V  T  H  S  R  G  M  H  Q  R  S  F  H  L  *  S  S  I  V  Q  T  C  E  L  Q  S  W  D  Q  R  P  Q  R  A  L  F  H  P  H  Y  H </second_frame>
            <third_frame>   I  R  P  K  T  L  F  A  W  F  D  F   : L  N  R  C  S  Y  F  H  K  P  H  C  F  *  H  S  L  F  T  E  M  S  H  F  K  V  *  I  Y  M  P  Y  R  V  I  F  C  N  *  T  Q  M  K  K  H  H  I  *  T  N  Q  T  A  M  K  N  V  K  Q  L  Q  H  C  K  *  G  R  N  F  K  E  L  F  *  N  P  K  *  V  *  K  L  D  L  *  G  K  T  D  A  L  L  C  Q  L  I  Q  G  S  R  G  L  N  L  C  N  L  S  N  C  L  V  L  F  R  *  P  T  L  E  E  C  T  N  D  L  S  I  F  D  P  V  L  S  K  L  V  S  C  R  V  G  I  S  V  P  K  E  H  C  F  T  H  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0076D18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="37332" e_stop="37062"/>
            <exon e_start="36755" e_stop="36166"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37332" e_stop="37062" e_length="271"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.987">
            <gDNA_intron_boundary i_start="37061" i_stop="36756" i_length="306"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="36755" e_stop="36166" e_length="590"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37332" stop="37062"/>
              <exon start="36755" stop="36166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703480" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTGTTTCACATAACGAGCGACTTGAAGTTGATCGCATCCCAGCCCTTGTAGAATTGTGCATTCAGGCTGGTGTGGACTTACCTGAGTACCCAACCCGAAGAAGGAAGTTCCCCATTTACCGGGTTGCTGGAAAACTCATAGATTTTGAGAAGAGGTTTCCCAAGGATGATTTGTTCGGGAAGGACGTAGAAACTTTTAGGTCTAGGGAAACTATTAAGAAGCACATCGGAGATGGAAATTATTTGAATTTACCCTACGATGACATAAAAG : GATTCGCTATGCGAGGAATGGAAGCTTGGGAGACTATGCGTACTGGAGCCATACAGCTCATGAAAACTTATGGCGTTCAAACATGTGGATATTGTCCTGAGTTGCAAGTCGGGCCAAAGGGGCATAGGGTTAGGCAATGTCAAGCCTTCAAGCACCAGATGAGGGATGGACAACATGCTTGGCAAGAGGCAACAATAGATGATCTTCTCTCCACTGTATATGTTTGGCATGTCCAAAACCCGCATGCTGGTGACGTTTTGGTTGATTCTATGAAAAGGTATTATGGAAAGTTACCTGCAGTCGTTGAACTGTTTAGTCAAGTTGGAGCACAGGTCGGAGATGATTACTATCACATGATGAGAGATGATGTTGTAGTTCCTGGACGAGATGAAGAAAAGTTAGTTGTATAAAGCTCTGAAATGCTGCCAACATATTGGCAGAGTAGAATCAACATTAGACCGAAGACATTGTTTGCTTGGTTTGATTTCTGCTAGTGAGGATAAACCCAAGACTGTATCGTTGCCAGAGCTCGTTTGTTGTTAGGGTAAATCTATGCAGTTTCTGGCAATTGAAACTTCAACTTCATGTTG</gDNA_template>
            <first_frame> A  V  S  H  N  E  R  L  E  V  D  R  I  P  A  L  V  E  L  C  I  Q  A  G  V  D  L  P  E  Y  P  T  R  R  R  K  F  P  I  Y  R  V  A  G  K  L  I  D  F  E  K  R  F  P  K  D  D  L  F  G  K  D  V  E  T  F  R  S  R  E  T  I  K  K  H  I  G  D  G  N  Y  L  N  L  P  Y  D  D  I  K   : G  F  A  M  R  G  M  E  A  W  E  T  M  R  T  G  A  I  Q  L  M  K  T  Y  G  V  Q  T  C  G  Y  C  P  E  L  Q  V  G  P  K  G  H  R  V  R  Q  C  Q  A  F  K  H  Q  M  R  D  G  Q  H  A  W  Q  E  A  T  I  D  D  L  L  S  T  V  Y  V  W  H  V  Q  N  P  H  A  G  D  V  L  V  D  S  M  K  R  Y  Y  G  K  L  P  A  V  V  E  L  F  S  Q  V  G  A  Q  V  G  D  D  Y  Y  H  M  M  R  D  D  V  V  V  P  G  R  D  E  E  K  L  V  V  *  S  S  E  M  L  P  T  Y  W  Q  S  R  I  N  I  R  P  K  T  L  F  A  W  F  D  F  C  *  *  G  *  T  Q  D  C  I  V  A  R  A  R  L  L  L  G  *  I  Y  A  V  S  G  N  *  N  F  N  F  M  L </first_frame>
            <second_frame>  L  F  H  I  T  S  D  L  K  L  I  A  S  Q  P  L  *  N  C  A  F  R  L  V  W  T  Y  L  S  T  Q  P  E  E  G  S  S  P  F  T  G  L  L  E  N  S  *  I  L  R  R  G  F  P  R  M  I  C  S  G  R  T  *  K  L  L  G  L  G  K  L  L  R  S  T  S  E  M  E  I  I  *  I  Y  P  T  M  T  *  K  :  D  S  L  C  E  E  W  K  L  G  R  L  C  V  L  E  P  Y  S  S  *  K  L  M  A  F  K  H  V  D  I  V  L  S  C  K  S  G  Q  R  G  I  G  L  G  N  V  K  P  S  S  T  R  *  G  M  D  N  M  L  G  K  R  Q  Q  *  M  I  F  S  P  L  Y  M  F  G  M  S  K  T  R  M  L  V  T  F  W  L  I  L  *  K  G  I  M  E  S  Y  L  Q  S  L  N  C  L  V  K  L  E  H  R  S  E  M  I  T  I  T  *  *  E  M  M  L  *  F  L  D  E  M  K  K  S  *  L  Y  K  A  L  K  C  C  Q  H  I  G  R  V  E  S  T  L  D  R  R  H  C  L  L  G  L  I  S  A  S  E  D  K  P  K  T  V  S  L  P  E  L  V  C  C  *  G  K  S  M  Q  F  L  A  I  E  T  S  T  S  C   </second_frame>
            <third_frame>   C  F  T  *  R  A  T  *  S  *  S  H  P  S  P  C  R  I  V  H  S  G  W  C  G  L  T  *  V  P  N  P  K  K  E  V  P  H  L  P  G  C  W  K  T  H  R  F  *  E  E  V  S  Q  G  *  F  V  R  E  G  R  R  N  F  *  V  *  G  N  Y  *  E  A  H  R  R  W  K  L  F  E  F  T  L  R  *  H  K  R :   I  R  Y  A  R  N  G  S  L  G  D  Y  A  Y  W  S  H  T  A  H  E  N  L  W  R  S  N  M  W  I  L  S  *  V  A  S  R  A  K  G  A  *  G  *  A  M  S  S  L  Q  A  P  D  E  G  W  T  T  C  L  A  R  G  N  N  R  *  S  S  L  H  C  I  C  L  A  C  P  K  P  A  C  W  *  R  F  G  *  F  Y  E  K  V  L  W  K  V  T  C  S  R  *  T  V  *  S  S  W  S  T  G  R  R  *  L  L  S  H  D  E  R  *  C  C  S  S  W  T  R  *  R  K  V  S  C  I  K  L  *  N  A  A  N  I  L  A  E  *  N  Q  H  *  T  E  D  I  V  C  L  V  *  F  L  L  V  R  I  N  P  R  L  Y  R  C  Q  S  S  F  V  V  R  V  N  L  C  S  F  W  Q  L  K  L  Q  L  H  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37332" stop="37062"/>
                    <exon start="36755" stop="36346"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVSHNERLEVDRIPALVELCIQAGVDLPEYPTRRRKFPIYRVAGKLIDFEKRFPKDDLFGKDVETFRSRETIKKHIGDGNYLNLPYDDIKGFAMRGMEAWETMRTGAIQLMKTYGVQTCGYCPELQVGPKGHRVRQCQAFKHQMRDGQHAWQEATIDDLLSTVYVWHVQNPHAGDVLVDSMKRYYGKLPAVVELFSQVGAQVGDDYYHMMRDDVVVPGRDEEKLVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="53023" PGL_stop="52250"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53023" e_stop="52250"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="53023" e_stop="52250" e_length="774"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53023" stop="52573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281962" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52981" stop="52250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732176" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52981" stop="52343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52963" stop="52254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52902" stop="52746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286320" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTACACTATAGTTTTAGAGACACCAAAATAAAACCATCATTTCTCCCTTCAACAACACTCCCTCTTGGCTAGCTCCAATACTATAGTTTGTGGAGACTAGCCAAACCACACACACAAAAAAATCTTCCTTCTACAATTTGCTTCAAATTCATTCAATATCAACAATAACAAATTCAACGACACGTTCATTATGACGAACGAACGTGAAAATCCATCATTTTTTTCTATACATCCCTCAAGACGCCCCGACCCTAACAATGACAAGGCCGAATCAACAAGGCCTAATAATTTACTAGTCAAGAAAAATAACGTCACGATTAAACGTGATCAAGAAAAATTCAACAATACAGAAATTACGTCAGACATGATCAACGTGCACGTGGGACATGTTGGCGCGCATAACGAGGGCGGACCGATGAGGACAGATGATAGTGGACGTGAAAGATTGAAGAGACATAGAATTGAAGTGGCAGGACATGTATGGATACCAGAAATTTGGGGACAAGAAGAATTACTCAAAGATTGGATTGATTGTAGTGCATTTGATTCAAAATTGAATAATAATAATAATATAATGTCAGCTAGGGCTGCTTTGGTTGAAGAAAGAAGAAGAAATAATTCATCTTGCAGATTGAGAATTGAAAATAGCTATTGAAATTATGCACCAAAAAAAAAAAAAAAGATGAGTTTTAATTTTTATTTTATTTTTTTGGTTTTTTTTCTTCTTCTCTTTAATTGAACTGTTTTATTATTTTTATCATAATAATTGTGT</gDNA_template>
            <first_frame> S  Y  T  I  V  L  E  T  P  K  *  N  H  H  F  S  L  Q  Q  H  S  L  L  A  S  S  N  T  I  V  C  G  D  *  P  N  H  T  H  K  K  I  F  L  L  Q  F  A  S  N  S  F  N  I  N  N  N  K  F  N  D  T  F  I  M  T  N  E  R  E  N  P  S  F  F  S  I  H  P  S  R  R  P  D  P  N  N  D  K  A  E  S  T  R  P  N  N  L  L  V  K  K  N  N  V  T  I  K  R  D  Q  E  K  F  N  N  T  E  I  T  S  D  M  I  N  V  H  V  G  H  V  G  A  H  N  E  G  G  P  M  R  T  D  D  S  G  R  E  R  L  K  R  H  R  I  E  V  A  G  H  V  W  I  P  E  I  W  G  Q  E  E  L  L  K  D  W  I  D  C  S  A  F  D  S  K  L  N  N  N  N  N  I  M  S  A  R  A  A  L  V  E  E  R  R  R  N  N  S  S  C  R  L  R  I  E  N  S  Y  *  N  Y  A  P  K  K  K  K  K  M  S  F  N  F  Y  F  I  F  L  V  F  F  L  L  L  F  N  *  T  V  L  L  F  L  S  *  *  L  C </first_frame>
            <second_frame>  L  T  L  *  F  *  R  H  Q  N  K  T  I  I  S  P  F  N  N  T  P  S  W  L  A  P  I  L  *  F  V  E  T  S  Q  T  T  H  T  K  K  S  S  F  Y  N  L  L  Q  I  H  S  I  S  T  I  T  N  S  T  T  R  S  L  *  R  T  N  V  K  I  H  H  F  F  L  Y  I  P  Q  D  A  P  T  L  T  M  T  R  P  N  Q  Q  G  L  I  I  Y  *  S  R  K  I  T  S  R  L  N  V  I  K  K  N  S  T  I  Q  K  L  R  Q  T  *  S  T  C  T  W  D  M  L  A  R  I  T  R  A  D  R  *  G  Q  M  I  V  D  V  K  D  *  R  D  I  E  L  K  W  Q  D  M  Y  G  Y  Q  K  F  G  D  K  K  N  Y  S  K  I  G  L  I  V  V  H  L  I  Q  N  *  I  I  I  I  I  *  C  Q  L  G  L  L  W  L  K  K  E  E  E  I  I  H  L  A  D  *  E  L  K  I  A  I  E  I  M  H  Q  K  K  K  K  R  *  V  L  I  F  I  L  F  F  W  F  F  F  F  F  S  L  I  E  L  F  Y  Y  F  Y  H  N  N  C   </second_frame>
            <third_frame>   L  H  Y  S  F  R  D  T  K  I  K  P  S  F  L  P  S  T  T  L  P  L  G  *  L  Q  Y  Y  S  L  W  R  L  A  K  P  H  T  Q  K  N  L  P  S  T  I  C  F  K  F  I  Q  Y  Q  Q  *  Q  I  Q  R  H  V  H  Y  D  E  R  T  *  K  S  I  I  F  F  Y  T  S  L  K  T  P  R  P  *  Q  *  Q  G  R  I  N  K  A  *  *  F  T  S  Q  E  K  *  R  H  D  *  T  *  S  R  K  I  Q  Q  Y  R  N  Y  V  R  H  D  Q  R  A  R  G  T  C  W  R  A  *  R  G  R  T  D  E  D  R  *  *  W  T  *  K  I  E  E  T  *  N  *  S  G  R  T  C  M  D  T  R  N  L  G  T  R  R  I  T  Q  R  L  D  *  L  *  C  I  *  F  K  I  E  *  *  *  *  Y  N  V  S  *  G  C  F  G  *  R  K  K  K  K  *  F  I  L  Q  I  E  N  *  K  *  L  L  K  L  C  T  K  K  K  K  K  D  E  F  *  F  L  F  Y  F  F  G  F  F  S  S  S  L  *  L  N  C  F  I  I  F  I  I  I  I  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52921" stop="52367"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PNHTHKKIFLLQFASNSFNINNNKFNDTFIMTNERENPSFFSIHPSRRPDPNNDKAESTRPNNLLVKKNNVTIKRDQEKFNNTEITSDMINVHVGHVGAHNEGGPMRTDDSGRERLKRHRIEVAGHVWIPEIWGQEELLKDWIDCSAFDSKLNNNNNIMSARAALVEERRRNNSSCRLRIENSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="77135" PGL_stop="57770"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77107" e_stop="77015"/>
            <exon e_start="75387" e_stop="74648"/>
            <exon e_start="72163" e_stop="71864"/>
            <exon e_start="67049" e_stop="66959"/>
            <exon e_start="60957" e_stop="60266"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.094" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="0.992"/>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.959" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="77107" e_stop="77015" e_length="93"/>
          </exon>
          <intron i_serial="1" don_prob="0.094" acc_prob="0.998">
            <gDNA_intron_boundary i_start="77014" i_stop="75388" i_length="1627"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="75387" e_stop="74648" e_length="740"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="74647" i_stop="72164" i_length="2484"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="72163" e_stop="71864" e_length="300"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="71863" i_stop="67050" i_length="4814"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67049" e_stop="66959" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.959">
            <gDNA_intron_boundary i_start="66958" i_stop="60958" i_length="6001"/>
          </intron>
          <exon e_serial="5" e_score="0.997">
            <gDNA_exon_boundary e_start="60957" e_stop="60266" e_length="692"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77107" stop="77015"/>
              <exon start="75387" stop="74788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75387" stop="74851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74788" stop="74648"/>
              <exon start="72163" stop="71864"/>
              <exon start="67049" stop="66959"/>
              <exon start="60957" stop="60842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74666" stop="74648"/>
              <exon start="72163" stop="71864"/>
              <exon start="67049" stop="66959"/>
              <exon start="60957" stop="60904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60890" stop="60266"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60871" stop="60277"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264051" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGTAGCCAAAACTCTGTCTTTCTCTATATTTCTTCAAAATTTCAAAGGATTTGTGCAATTCTCTTTTTGGGTTTTTGTCTCTTCAATTTCAG : GTGCTGAAAGAAAAAACTGGACTGGAACTTCAGATATTATCTAGGAGGTCGATTATATTTTTTCTGGATTAATCAGAATAGTTTGAGCTTGAGTTTGGGAATATTCTGTTATGGCTACTTGTACGTCAGCTGTATTTATGCCTCCTGATACGCGGCGGTCACGAGGGGTCTTGACTGTTCTTGGTGGTAGAGTTTGCCCCTTGAAAATTCAAGATGAGAAGATTGGATACTTGGGCGTTAACCAAAAGGGTACCTCAAGTTTGCCTCAATTCAAATGTTCAGCCAATTCCCAGAGTGTCAATCAGTATCAAAACAAAGACCCCTTTCTAAATTTACATCCCGAAATTTCTATGCTCAGAGGCGAAGGTAACAATACAATGACTACCTCTAGACAAGAAAGCTCTAGTGGAAATGTCAGTGAGAGTTTGATGGATTCATCAAGCTCGAACAATTTTAATGAGGCCAAAATCAAGGTGGTTGGTGTAGGAGGTGGTGGATCAAATGCAGTTAATCGCATGATTGAGAGCTCTATGAAGGGTGTAGAGTTTTGGATTGTGAACACGGATATCCAAGCAATGAGGATGTCACCTGTAAATCCTGAGTATAGACTGCCAATAGGTCAAGAACTCACAAGGGGACTTGGTGCAGGCGGTAATCCAGATATAGGGATGAATGCTGCCAATGAGAGCAAGCAGGCCATTGAGGAAGCAGTTTACGGCTCAGACATGGTTTTTGTGACT : GCTGGAATGGGTGGAGGAACAGGGACTGGTGCGGCTCCTATAATTGCAGGAACTGCCAAATCAATGGGTATCTTAACTGTTGGTATCGTTACAACCCCCTTTTCTTTTGAGGGACGAAGAAGAGCAGTTCAAGCCCAAGAAGGAATTGCAGCTTTGAGAGAAAATGTTGATACTCTGATTGTCATTCCAAATGACAAATTATTGACAGCTGTTTCTCCATCAACCCCAGTAACTGAAGCTTTTAACCTGGCTGATGATATTCTTCGGCAAGGAGTTCGTGGTATTTCTGATATAATTACG : ATTCCTGGGCTAGTAAATGTGGATTTTGCTGATGTGCGTGCTATTATGGCAAATGCTGGGTCTTCTTTAATGGGAATAGGAACTGCTACAG : GAAAGACCAGAGCGAGAGATGCAGCATTGAACGCCATTCAATCTCCTCTGCTGGATATCGGTATAGAGAGGGCTACTGGAATTGTGTGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAGGTACCCGACTATTTTTTCTCTTGCTCTCTCTCTCTCTTCCGATACACTTACTAATCATCCTTAGTATGCACCTTTTGTTGACTGAAAAAGGCAGAAATGTATTCCATAACGTAGAAAAGATTTTGGCAGTAGAAGCCTTTTACTTTTTTCAATGTAGAGATTTTTCTTATTGAAGATGGCATATATGAATGTGTGAATTTCCTTGTATGATCGTCTCTTACAAAGAAAAATAAGAGAGAAACTTTATCTAATGGTGCATGAGGGTTGTGAAAAGCTATGTTGCTTAGACTCTTCAAAAATGTCGACGGGTGCGTGTCAGATCCTCCAAAAATAGTGTATTTTTGAAGGATCTGACACGGGTGCGGCAACATTTTTGGAGAGTCCAAGCAACTTAGGTGAAAAGATCAAACAACCTATGCTTCTGGTTCATCCTGTTTCCTTATCTGCTGTTTCTCAGCATTTATGTATGCCAATGTTGTCATTTTTAAAGTGCGCTTAAGCCTTGAAGCGTGGTACAAAACATGTTGAGCACTTTGCCTCGCTTTATGCACGCTTCAGTGTCGTCAT</gDNA_template>
            <first_frame> *  *  P  K  L  C  L  S  L  Y  F  F  K  I  S  K  D  L  C  N  S  L  F  G  F  L  S  L  Q  F  Q  :  V  L  K  E  K  T  G  L  E  L  Q  I  L  S  R  R  S  I  I  F  F  L  D  *  S  E  *  F  E  L  E  F  G  N  I  L  L  W  L  L  V  R  Q  L  Y  L  C  L  L  I  R  G  G  H  E  G  S  *  L  F  L  V  V  E  F  A  P  *  K  F  K  M  R  R  L  D  T  W  A  L  T  K  R  V  P  Q  V  C  L  N  S  N  V  Q  P  I  P  R  V  S  I  S  I  K  T  K  T  P  F  *  I  Y  I  P  K  F  L  C  S  E  A  K  V  T  I  Q  *  L  P  L  D  K  K  A  L  V  E  M  S  V  R  V  *  W  I  H  Q  A  R  T  I  L  M  R  P  K  S  R  W  L  V  *  E  V  V  D  Q  M  Q  L  I  A  *  L  R  A  L  *  R  V  *  S  F  G  L  *  T  R  I  S  K  Q  *  G  C  H  L  *  I  L  S  I  D  C  Q  *  V  K  N  S  Q  G  D  L  V  Q  A  V  I  Q  I  *  G  *  M  L  P  M  R  A  S  R  P  L  R  K  Q  F  T  A  Q  T  W  F  L  *  L :   L  E  W  V  E  E  Q  G  L  V  R  L  L  *  L  Q  E  L  P  N  Q  W  V  S  *  L  L  V  S  L  Q  P  P  F  L  L  R  D  E  E  E  Q  F  K  P  K  K  E  L  Q  L  *  E  K  M  L  I  L  *  L  S  F  Q  M  T  N  Y  *  Q  L  F  L  H  Q  P  Q  *  L  K  L  L  T  W  L  M  I  F  F  G  K  E  F  V  V  F  L  I  *  L  R :   F  L  G  *  *  M  W  I  L  L  M  C  V  L  L  W  Q  M  L  G  L  L  *  W  E  *  E  L  L  Q  :  E  R  P  E  R  E  M  Q  H  *  T  P  F  N  L  L  C  W  I  S  V  *  R  G  L  L  E  L  C  G  I  *  L  V  V  V  I  *  H  Y  L  R  Y  P  T  I  F  S  L  A  L  S  L  S  S  D  T  L  T  N  H  P  *  Y  A  P  F  V  D  *  K  R  Q  K  C  I  P  *  R  R  K  D  F  G  S  R  S  L  L  L  F  S  M  *  R  F  F  L  L  K  M  A  Y  M  N  V  *  I  S  L  Y  D  R  L  L  Q  R  K  I  R  E  K  L  Y  L  M  V  H  E  G  C  E  K  L  C  C  L  D  S  S  K  M  S  T  G  A  C  Q  I  L  Q  K  *  C  I  F  E  G  S  D  T  G  A  A  T  F  L  E  S  P  S  N  L  G  E  K  I  K  Q  P  M  L  L  V  H  P  V  S  L  S  A  V  S  Q  H  L  C  M  P  M  L  S  F  L  K  C  A  *  A  L  K  R  G  T  K  H  V  E  H  F  A  S  L  Y  A  R  F  S  V  V   </first_frame>
            <second_frame>  S  S  Q  N  S  V  F  L  Y  I  S  S  K  F  Q  R  I  C  A  I  L  F  L  G  F  C  L  F  N  F  R :   C  *  K  K  K  L  D  W  N  F  R  Y  Y  L  G  G  R  L  Y  F  F  W  I  N  Q  N  S  L  S  L  S  L  G  I  F  C  Y  G  Y  L  Y  V  S  C  I  Y  A  S  *  Y  A  A  V  T  R  G  L  D  C  S  W  W  *  S  L  P  L  E  N  S  R  *  E  D  W  I  L  G  R  *  P  K  G  Y  L  K  F  A  S  I  Q  M  F  S  Q  F  P  E  C  Q  S  V  S  K  Q  R  P  L  S  K  F  T  S  R  N  F  Y  A  Q  R  R  R  *  Q  Y  N  D  Y  L  *  T  R  K  L  *  W  K  C  Q  *  E  F  D  G  F  I  K  L  E  Q  F  *  *  G  Q  N  Q  G  G  W  C  R  R  W  W  I  K  C  S  *  S  H  D  *  E  L  Y  E  G  C  R  V  L  D  C  E  H  G  Y  P  S  N  E  D  V  T  C  K  S  *  V  *  T  A  N  R  S  R  T  H  K  G  T  W  C  R  R  *  S  R  Y  R  D  E  C  C  Q  *  E  Q  A  G  H  *  G  S  S  L  R  L  R  H  G  F  C  D   : C  W  N  G  W  R  N  R  D  W  C  G  S  Y  N  C  R  N  C  Q  I  N  G  Y  L  N  C  W  Y  R  Y  N  P  L  F  F  *  G  T  K  K  S  S  S  S  P  R  R  N  C  S  F  E  R  K  C  *  Y  S  D  C  H  S  K  *  Q  I  I  D  S  C  F  S  I  N  P  S  N  *  S  F  *  P  G  *  *  Y  S  S  A  R  S  S  W  Y  F  *  Y  N  Y   : D  S  W  A  S  K  C  G  F  C  *  C  A  C  Y  Y  G  K  C  W  V  F  F  N  G  N  R  N  C  Y  R :   K  D  Q  S  E  R  C  S  I  E  R  H  S  I  S  S  A  G  Y  R  Y  R  E  G  Y  W  N  C  V  E  Y  N  W  W  *  *  S  N  I  I  *  G  T  R  L  F  F  L  L  L  S  L  S  L  P  I  H  L  L  I  I  L  S  M  H  L  L  L  T  E  K  G  R  N  V  F  H  N  V  E  K  I  L  A  V  E  A  F  Y  F  F  Q  C  R  D  F  S  Y  *  R  W  H  I  *  M  C  E  F  P  C  M  I  V  S  Y  K  E  K  *  E  R  N  F  I  *  W  C  M  R  V  V  K  S  Y  V  A  *  T  L  Q  K  C  R  R  V  R  V  R  S  S  K  N  S  V  F  L  K  D  L  T  R  V  R  Q  H  F  W  R  V  Q  A  T  *  V  K  R  S  N  N  L  C  F  W  F  I  L  F  P  Y  L  L  F  L  S  I  Y  V  C  Q  C  C  H  F  *  S  A  L  K  P  *  S  V  V  Q  N  M  L  S  T  L  P  R  F  M  H  A  S  V  S  S  </second_frame>
            <third_frame>   V  A  K  T  L  S  F  S  I  F  L  Q  N  F  K  G  F  V  Q  F  S  F  W  V  F  V  S  S  I  S   : G  A  E  R  K  N  W  T  G  T  S  D  I  I  *  E  V  D  Y  I  F  S  G  L  I  R  I  V  *  A  *  V  W  E  Y  S  V  M  A  T  C  T  S  A  V  F  M  P  P  D  T  R  R  S  R  G  V  L  T  V  L  G  G  R  V  C  P  L  K  I  Q  D  E  K  I  G  Y  L  G  V  N  Q  K  G  T  S  S  L  P  Q  F  K  C  S  A  N  S  Q  S  V  N  Q  Y  Q  N  K  D  P  F  L  N  L  H  P  E  I  S  M  L  R  G  E  G  N  N  T  M  T  T  S  R  Q  E  S  S  S  G  N  V  S  E  S  L  M  D  S  S  S  S  N  N  F  N  E  A  K  I  K  V  V  G  V  G  G  G  G  S  N  A  V  N  R  M  I  E  S  S  M  K  G  V  E  F  W  I  V  N  T  D  I  Q  A  M  R  M  S  P  V  N  P  E  Y  R  L  P  I  G  Q  E  L  T  R  G  L  G  A  G  G  N  P  D  I  G  M  N  A  A  N  E  S  K  Q  A  I  E  E  A  V  Y  G  S  D  M  V  F  V  T  :  A  G  M  G  G  G  T  G  T  G  A  A  P  I  I  A  G  T  A  K  S  M  G  I  L  T  V  G  I  V  T  T  P  F  S  F  E  G  R  R  R  A  V  Q  A  Q  E  G  I  A  A  L  R  E  N  V  D  T  L  I  V  I  P  N  D  K  L  L  T  A  V  S  P  S  T  P  V  T  E  A  F  N  L  A  D  D  I  L  R  Q  G  V  R  G  I  S  D  I  I  T  :  I  P  G  L  V  N  V  D  F  A  D  V  R  A  I  M  A  N  A  G  S  S  L  M  G  I  G  T  A  T   : G  K  T  R  A  R  D  A  A  L  N  A  I  Q  S  P  L  L  D  I  G  I  E  R  A  T  G  I  V  W  N  I  T  G  G  S  D  L  T  L  F  E  V  P  D  Y  F  F  S  C  S  L  S  L  F  R  Y  T  Y  *  S  S  L  V  C  T  F  C  *  L  K  K  A  E  M  Y  S  I  T  *  K  R  F  W  Q  *  K  P  F  T  F  F  N  V  E  I  F  L  I  E  D  G  I  Y  E  C  V  N  F  L  V  *  S  S  L  T  K  K  N  K  R  E  T  L  S  N  G  A  *  G  L  *  K  A  M  L  L  R  L  F  K  N  V  D  G  C  V  S  D  P  P  K  I  V  Y  F  *  R  I  *  H  G  C  G  N  I  F  G  E  S  K  Q  L  R  *  K  D  Q  T  T  Y  A  S  G  S  S  C  F  L  I  C  C  F  S  A  F  M  Y  A  N  V  V  I  F  K  V  R  L  S  L  E  A  W  Y  K  T  C  *  A  L  C  L  A  L  C  T  L  Q  C  R  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75295" stop="74648"/>
                    <exon start="72163" stop="71864"/>
                    <exon start="67049" stop="66959"/>
                    <exon start="60957" stop="60779"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1215</number_coding_nucleotides>
                  <number_encoded_amino_acids>405</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VWEYSVMATCTSAVFMPPDTRRSRGVLTVLGGRVCPLKIQDEKIGYLGVNQKGTSSLPQFKCSANSQSVNQYQNKDPFLNLHPEISMLRGEGNNTMTTSRQESSSGNVSESLMDSSSSNNFNEAKIKVVGVGGGGSNAVNRMIESSMKGVEFWIVNTDIQAMRMSPVNPEYRLPIGQELTRGLGAGGNPDIGMNAANESKQAIEEAVYGSDMVFVTAGMGGGTGTGAAPIIAGTAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRENVDTLIVIPNDKLLTAVSPSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVPDYFFSCSLSLFRYTY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="77107" e_stop="77015"/>
            <exon e_start="75387" e_stop="74648"/>
            <exon e_start="72163" e_stop="71864"/>
            <exon e_start="67049" e_stop="66959"/>
            <exon e_start="60957" e_stop="60833"/>
            <exon e_start="59109" e_stop="59017"/>
            <exon e_start="58443" e_stop="58378"/>
            <exon e_start="58273" e_stop="58142"/>
            <exon e_start="58046" e_stop="57803"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.094" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="0.992"/>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.995" e_score="0.862"/>
          <exon-intron don_prob="0.999" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.963"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="77107" e_stop="77015" e_length="93"/>
          </exon>
          <intron i_serial="1" don_prob="0.094" acc_prob="0.998">
            <gDNA_intron_boundary i_start="77014" i_stop="75388" i_length="1627"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="75387" e_stop="74648" e_length="740"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="74647" i_stop="72164" i_length="2484"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="72163" e_stop="71864" e_length="300"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="71863" i_stop="67050" i_length="4814"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67049" e_stop="66959" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.959">
            <gDNA_intron_boundary i_start="66958" i_stop="60958" i_length="6001"/>
          </intron>
          <exon e_serial="5" e_score="0.862">
            <gDNA_exon_boundary e_start="60957" e_stop="60833" e_length="125"/>
          </exon>
          <intron i_serial="5" don_prob="0.978" acc_prob="0.995">
            <gDNA_intron_boundary i_start="60832" i_stop="59110" i_length="1723"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59109" e_stop="59017" e_length="93"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.929">
            <gDNA_intron_boundary i_start="59016" i_stop="58444" i_length="573"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="58443" e_stop="58378" e_length="66"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="58377" i_stop="58274" i_length="104"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="58273" e_stop="58142" e_length="132"/>
          </exon>
          <intron i_serial="8" don_prob="0.962" acc_prob="0.000">
            <gDNA_intron_boundary i_start="58141" i_stop="58047" i_length="95"/>
          </intron>
          <exon e_serial="9" e_score="0.963">
            <gDNA_exon_boundary e_start="58046" e_stop="57803" e_length="244"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77107" stop="77015"/>
              <exon start="75387" stop="74788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75387" stop="74851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74788" stop="74648"/>
              <exon start="72163" stop="71864"/>
              <exon start="67049" stop="66959"/>
              <exon start="60957" stop="60842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74666" stop="74648"/>
              <exon start="72163" stop="71864"/>
              <exon start="67049" stop="66959"/>
              <exon start="60957" stop="60904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60912" stop="60833"/>
              <exon start="59109" stop="59017"/>
              <exon start="58443" stop="58378"/>
              <exon start="58273" stop="58142"/>
              <exon start="58046" stop="57803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGTAGCCAAAACTCTGTCTTTCTCTATATTTCTTCAAAATTTCAAAGGATTTGTGCAATTCTCTTTTTGGGTTTTTGTCTCTTCAATTTCAG : GTGCTGAAAGAAAAAACTGGACTGGAACTTCAGATATTATCTAGGAGGTCGATTATATTTTTTCTGGATTAATCAGAATAGTTTGAGCTTGAGTTTGGGAATATTCTGTTATGGCTACTTGTACGTCAGCTGTATTTATGCCTCCTGATACGCGGCGGTCACGAGGGGTCTTGACTGTTCTTGGTGGTAGAGTTTGCCCCTTGAAAATTCAAGATGAGAAGATTGGATACTTGGGCGTTAACCAAAAGGGTACCTCAAGTTTGCCTCAATTCAAATGTTCAGCCAATTCCCAGAGTGTCAATCAGTATCAAAACAAAGACCCCTTTCTAAATTTACATCCCGAAATTTCTATGCTCAGAGGCGAAGGTAACAATACAATGACTACCTCTAGACAAGAAAGCTCTAGTGGAAATGTCAGTGAGAGTTTGATGGATTCATCAAGCTCGAACAATTTTAATGAGGCCAAAATCAAGGTGGTTGGTGTAGGAGGTGGTGGATCAAATGCAGTTAATCGCATGATTGAGAGCTCTATGAAGGGTGTAGAGTTTTGGATTGTGAACACGGATATCCAAGCAATGAGGATGTCACCTGTAAATCCTGAGTATAGACTGCCAATAGGTCAAGAACTCACAAGGGGACTTGGTGCAGGCGGTAATCCAGATATAGGGATGAATGCTGCCAATGAGAGCAAGCAGGCCATTGAGGAAGCAGTTTACGGCTCAGACATGGTTTTTGTGACT : GCTGGAATGGGTGGAGGAACAGGGACTGGTGCGGCTCCTATAATTGCAGGAACTGCCAAATCAATGGGTATCTTAACTGTTGGTATCGTTACAACCCCCTTTTCTTTTGAGGGACGAAGAAGAGCAGTTCAAGCCCAAGAAGGAATTGCAGCTTTGAGAGAAAATGTTGATACTCTGATTGTCATTCCAAATGACAAATTATTGACAGCTGTTTCTCCATCAACCCCAGTAACTGAAGCTTTTAACCTGGCTGATGATATTCTTCGGCAAGGAGTTCGTGGTATTTCTGATATAATTACG : ATTCCTGGGCTAGTAAATGTGGATTTTGCTGATGTGCGTGCTATTATGGCAAATGCTGGGTCTTCTTTAATGGGAATAGGAACTGCTACAG : GAAAGACCAGAGCGAGAGATGCAGCATTGAACGCCATTCAATCTCCTCTGCTGGATATCGGTATAGAGAGGGCTACTGGAATTGTGTGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAG : GTAAATGCTGCAGCAGAGGTTATATATGACCTTGTGGATCCAAGTGCTAACCTCATTTTTGGGGCGGTGATAGACCCATCAATAAGTGGACAG : GTCAGCATAACGCTGATTGCCACTGGTTTCAAGCGCCAAGAAGAAAGTGATATGAGGCCCCTCCAG : GGAAACCAACTAGCACAGGGAGATGCTTCACTTGGAACTAACAGACGACCTGCGTCCTTTCTGGAAGGTGGTTCAGTGGAAATTCCTGAGTTCCTCAGGAAAAAAGGGCGATTGCGCTATCCAAGAGCTTAA : TACAGGATCTTGGTTATGCATCGACTATCAAGTTTATCTCATGGAAAAACCATTGTCCATCTCGTTTTTCTTTATAATAATGTAGAATTGCCTATACATGTTAGTTTGCTAGTGAGTGTAATAAAGCTGGAGATACTATCAAAGGTAGACAATTAGGATCACAATCAGTCTGGTTTCACCTATGATCTGTAAAGTGTTGCTGTAAAGTTGATATCCATTGACGAACTTGTGCACATATATGTGA</gDNA_template>
            <first_frame> *  *  P  K  L  C  L  S  L  Y  F  F  K  I  S  K  D  L  C  N  S  L  F  G  F  L  S  L  Q  F  Q  :  V  L  K  E  K  T  G  L  E  L  Q  I  L  S  R  R  S  I  I  F  F  L  D  *  S  E  *  F  E  L  E  F  G  N  I  L  L  W  L  L  V  R  Q  L  Y  L  C  L  L  I  R  G  G  H  E  G  S  *  L  F  L  V  V  E  F  A  P  *  K  F  K  M  R  R  L  D  T  W  A  L  T  K  R  V  P  Q  V  C  L  N  S  N  V  Q  P  I  P  R  V  S  I  S  I  K  T  K  T  P  F  *  I  Y  I  P  K  F  L  C  S  E  A  K  V  T  I  Q  *  L  P  L  D  K  K  A  L  V  E  M  S  V  R  V  *  W  I  H  Q  A  R  T  I  L  M  R  P  K  S  R  W  L  V  *  E  V  V  D  Q  M  Q  L  I  A  *  L  R  A  L  *  R  V  *  S  F  G  L  *  T  R  I  S  K  Q  *  G  C  H  L  *  I  L  S  I  D  C  Q  *  V  K  N  S  Q  G  D  L  V  Q  A  V  I  Q  I  *  G  *  M  L  P  M  R  A  S  R  P  L  R  K  Q  F  T  A  Q  T  W  F  L  *  L :   L  E  W  V  E  E  Q  G  L  V  R  L  L  *  L  Q  E  L  P  N  Q  W  V  S  *  L  L  V  S  L  Q  P  P  F  L  L  R  D  E  E  E  Q  F  K  P  K  K  E  L  Q  L  *  E  K  M  L  I  L  *  L  S  F  Q  M  T  N  Y  *  Q  L  F  L  H  Q  P  Q  *  L  K  L  L  T  W  L  M  I  F  F  G  K  E  F  V  V  F  L  I  *  L  R :   F  L  G  *  *  M  W  I  L  L  M  C  V  L  L  W  Q  M  L  G  L  L  *  W  E  *  E  L  L  Q  :  E  R  P  E  R  E  M  Q  H  *  T  P  F  N  L  L  C  W  I  S  V  *  R  G  L  L  E  L  C  G  I  *  L  V  V  V  I  *  H  Y  L  R :   *  M  L  Q  Q  R  L  Y  M  T  L  W  I  Q  V  L  T  S  F  L  G  R  *  *  T  H  Q  *  V  D  R :   S  A  *  R  *  L  P  L  V  S  S  A  K  K  K  V  I  *  G  P  S  R :   E  T  N  *  H  R  E  M  L  H  L  E  L  T  D  D  L  R  P  F  W  K  V  V  Q  W  K  F  L  S  S  S  G  K  K  G  D  C  A  I  Q  E  L  N :   T  G  S  W  L  C  I  D  Y  Q  V  Y  L  M  E  K  P  L  S  I  S  F  F  F  I  I  M  *  N  C  L  Y  M  L  V  C  *  *  V  *  *  S  W  R  Y  Y  Q  R  *  T  I  R  I  T  I  S  L  V  S  P  M  I  C  K  V  L  L  *  S  *  Y  P  L  T  N  L  C  T  Y  M  * </first_frame>
            <second_frame>  S  S  Q  N  S  V  F  L  Y  I  S  S  K  F  Q  R  I  C  A  I  L  F  L  G  F  C  L  F  N  F  R :   C  *  K  K  K  L  D  W  N  F  R  Y  Y  L  G  G  R  L  Y  F  F  W  I  N  Q  N  S  L  S  L  S  L  G  I  F  C  Y  G  Y  L  Y  V  S  C  I  Y  A  S  *  Y  A  A  V  T  R  G  L  D  C  S  W  W  *  S  L  P  L  E  N  S  R  *  E  D  W  I  L  G  R  *  P  K  G  Y  L  K  F  A  S  I  Q  M  F  S  Q  F  P  E  C  Q  S  V  S  K  Q  R  P  L  S  K  F  T  S  R  N  F  Y  A  Q  R  R  R  *  Q  Y  N  D  Y  L  *  T  R  K  L  *  W  K  C  Q  *  E  F  D  G  F  I  K  L  E  Q  F  *  *  G  Q  N  Q  G  G  W  C  R  R  W  W  I  K  C  S  *  S  H  D  *  E  L  Y  E  G  C  R  V  L  D  C  E  H  G  Y  P  S  N  E  D  V  T  C  K  S  *  V  *  T  A  N  R  S  R  T  H  K  G  T  W  C  R  R  *  S  R  Y  R  D  E  C  C  Q  *  E  Q  A  G  H  *  G  S  S  L  R  L  R  H  G  F  C  D   : C  W  N  G  W  R  N  R  D  W  C  G  S  Y  N  C  R  N  C  Q  I  N  G  Y  L  N  C  W  Y  R  Y  N  P  L  F  F  *  G  T  K  K  S  S  S  S  P  R  R  N  C  S  F  E  R  K  C  *  Y  S  D  C  H  S  K  *  Q  I  I  D  S  C  F  S  I  N  P  S  N  *  S  F  *  P  G  *  *  Y  S  S  A  R  S  S  W  Y  F  *  Y  N  Y   : D  S  W  A  S  K  C  G  F  C  *  C  A  C  Y  Y  G  K  C  W  V  F  F  N  G  N  R  N  C  Y  R :   K  D  Q  S  E  R  C  S  I  E  R  H  S  I  S  S  A  G  Y  R  Y  R  E  G  Y  W  N  C  V  E  Y  N  W  W  *  *  S  N  I  I  *   : G  K  C  C  S  R  G  Y  I  *  P  C  G  S  K  C  *  P  H  F  W  G  G  D  R  P  I  N  K  W  T   : G  Q  H  N  A  D  C  H  W  F  Q  A  P  R  R  K  *  Y  E  A  P  P   : G  K  P  T  S  T  G  R  C  F  T  W  N  *  Q  T  T  C  V  L  S  G  R  W  F  S  G  N  S  *  V  P  Q  E  K  R  A  I  A  L  S  K  S  L   : I  Q  D  L  G  Y  A  S  T  I  K  F  I  S  W  K  N  H  C  P  S  R  F  S  L  *  *  C  R  I  A  Y  T  C  *  F  A  S  E  C  N  K  A  G  D  T  I  K  G  R  Q  L  G  S  Q  S  V  W  F  H  L  *  S  V  K  C  C  C  K  V  D  I  H  *  R  T  C  A  H  I  C   </second_frame>
            <third_frame>   V  A  K  T  L  S  F  S  I  F  L  Q  N  F  K  G  F  V  Q  F  S  F  W  V  F  V  S  S  I  S   : G  A  E  R  K  N  W  T  G  T  S  D  I  I  *  E  V  D  Y  I  F  S  G  L  I  R  I  V  *  A  *  V  W  E  Y  S  V  M  A  T  C  T  S  A  V  F  M  P  P  D  T  R  R  S  R  G  V  L  T  V  L  G  G  R  V  C  P  L  K  I  Q  D  E  K  I  G  Y  L  G  V  N  Q  K  G  T  S  S  L  P  Q  F  K  C  S  A  N  S  Q  S  V  N  Q  Y  Q  N  K  D  P  F  L  N  L  H  P  E  I  S  M  L  R  G  E  G  N  N  T  M  T  T  S  R  Q  E  S  S  S  G  N  V  S  E  S  L  M  D  S  S  S  S  N  N  F  N  E  A  K  I  K  V  V  G  V  G  G  G  G  S  N  A  V  N  R  M  I  E  S  S  M  K  G  V  E  F  W  I  V  N  T  D  I  Q  A  M  R  M  S  P  V  N  P  E  Y  R  L  P  I  G  Q  E  L  T  R  G  L  G  A  G  G  N  P  D  I  G  M  N  A  A  N  E  S  K  Q  A  I  E  E  A  V  Y  G  S  D  M  V  F  V  T  :  A  G  M  G  G  G  T  G  T  G  A  A  P  I  I  A  G  T  A  K  S  M  G  I  L  T  V  G  I  V  T  T  P  F  S  F  E  G  R  R  R  A  V  Q  A  Q  E  G  I  A  A  L  R  E  N  V  D  T  L  I  V  I  P  N  D  K  L  L  T  A  V  S  P  S  T  P  V  T  E  A  F  N  L  A  D  D  I  L  R  Q  G  V  R  G  I  S  D  I  I  T  :  I  P  G  L  V  N  V  D  F  A  D  V  R  A  I  M  A  N  A  G  S  S  L  M  G  I  G  T  A  T   : G  K  T  R  A  R  D  A  A  L  N  A  I  Q  S  P  L  L  D  I  G  I  E  R  A  T  G  I  V  W  N  I  T  G  G  S  D  L  T  L  F  E  :  V  N  A  A  A  E  V  I  Y  D  L  V  D  P  S  A  N  L  I  F  G  A  V  I  D  P  S  I  S  G  Q  :  V  S  I  T  L  I  A  T  G  F  K  R  Q  E  E  S  D  M  R  P  L  Q  :  G  N  Q  L  A  Q  G  D  A  S  L  G  T  N  R  R  P  A  S  F  L  E  G  G  S  V  E  I  P  E  F  L  R  K  K  G  R  L  R  Y  P  R  A  *  :  Y  R  I  L  V  M  H  R  L  S  S  L  S  H  G  K  T  I  V  H  L  V  F  L  Y  N  N  V  E  L  P  I  H  V  S  L  L  V  S  V  I  K  L  E  I  L  S  K  V  D  N  *  D  H  N  Q  S  G  F  T  Y  D  L  *  S  V  A  V  K  L  I  S  I  D  E  L  V  H  I  Y  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75295" stop="74648"/>
                    <exon start="72163" stop="71864"/>
                    <exon start="67049" stop="66959"/>
                    <exon start="60957" stop="60833"/>
                    <exon start="59109" stop="59017"/>
                    <exon start="58443" stop="58378"/>
                    <exon start="58273" stop="58142"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1452</number_coding_nucleotides>
                  <number_encoded_amino_acids>484</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VWEYSVMATCTSAVFMPPDTRRSRGVLTVLGGRVCPLKIQDEKIGYLGVNQKGTSSLPQFKCSANSQSVNQYQNKDPFLNLHPEISMLRGEGNNTMTTSRQESSSGNVSESLMDSSSSNNFNEAKIKVVGVGGGGSNAVNRMIESSMKGVEFWIVNTDIQAMRMSPVNPEYRLPIGQELTRGLGAGGNPDIGMNAANESKQAIEEAVYGSDMVFVTAGMGGGTGTGAAPIIAGTAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRENVDTLIVIPNDKLLTAVSPSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPSANLIFGAVIDPSISGQVSITLIATGFKRQEESDMRPLQGNQLAQGDASLGTNRRPASFLEGGSVEIPEFLRKKGRLRYPRA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="77107" e_stop="77015"/>
            <exon e_start="75387" e_stop="74648"/>
            <exon e_start="72163" e_stop="71864"/>
            <exon e_start="67049" e_stop="66959"/>
            <exon e_start="60957" e_stop="60833"/>
            <exon e_start="59109" e_stop="59017"/>
            <exon e_start="58443" e_stop="58378"/>
            <exon e_start="58273" e_stop="58142"/>
            <exon e_start="58041" e_stop="57975"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.094" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="0.992"/>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.848" e_score="0.992"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="77107" e_stop="77015" e_length="93"/>
          </exon>
          <intron i_serial="1" don_prob="0.094" acc_prob="0.998">
            <gDNA_intron_boundary i_start="77014" i_stop="75388" i_length="1627"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="75387" e_stop="74648" e_length="740"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="74647" i_stop="72164" i_length="2484"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="72163" e_stop="71864" e_length="300"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="71863" i_stop="67050" i_length="4814"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67049" e_stop="66959" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.959">
            <gDNA_intron_boundary i_start="66958" i_stop="60958" i_length="6001"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="60957" e_stop="60833" e_length="125"/>
          </exon>
          <intron i_serial="5" don_prob="0.978" acc_prob="0.995">
            <gDNA_intron_boundary i_start="60832" i_stop="59110" i_length="1723"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59109" e_stop="59017" e_length="93"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.929">
            <gDNA_intron_boundary i_start="59016" i_stop="58444" i_length="573"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="58443" e_stop="58378" e_length="66"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="58377" i_stop="58274" i_length="104"/>
          </intron>
          <exon e_serial="8" e_score="0.992">
            <gDNA_exon_boundary e_start="58273" e_stop="58142" e_length="132"/>
          </exon>
          <intron i_serial="8" don_prob="0.962" acc_prob="0.848">
            <gDNA_intron_boundary i_start="58141" i_stop="58042" i_length="100"/>
          </intron>
          <exon e_serial="9" e_score="0.985">
            <gDNA_exon_boundary e_start="58041" e_stop="57975" e_length="67"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77107" stop="77015"/>
              <exon start="75387" stop="74788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75387" stop="74851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74788" stop="74648"/>
              <exon start="72163" stop="71864"/>
              <exon start="67049" stop="66959"/>
              <exon start="60957" stop="60842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74678" stop="74648"/>
              <exon start="72163" stop="71864"/>
              <exon start="67049" stop="66959"/>
              <exon start="60957" stop="60833"/>
              <exon start="59109" stop="59017"/>
              <exon start="58443" stop="58378"/>
              <exon start="58273" stop="58142"/>
              <exon start="58041" stop="57975"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74666" stop="74648"/>
              <exon start="72163" stop="71864"/>
              <exon start="67049" stop="66959"/>
              <exon start="60957" stop="60904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325732" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGTAGCCAAAACTCTGTCTTTCTCTATATTTCTTCAAAATTTCAAAGGATTTGTGCAATTCTCTTTTTGGGTTTTTGTCTCTTCAATTTCAG : GTGCTGAAAGAAAAAACTGGACTGGAACTTCAGATATTATCTAGGAGGTCGATTATATTTTTTCTGGATTAATCAGAATAGTTTGAGCTTGAGTTTGGGAATATTCTGTTATGGCTACTTGTACGTCAGCTGTATTTATGCCTCCTGATACGCGGCGGTCACGAGGGGTCTTGACTGTTCTTGGTGGTAGAGTTTGCCCCTTGAAAATTCAAGATGAGAAGATTGGATACTTGGGCGTTAACCAAAAGGGTACCTCAAGTTTGCCTCAATTCAAATGTTCAGCCAATTCCCAGAGTGTCAATCAGTATCAAAACAAAGACCCCTTTCTAAATTTACATCCCGAAATTTCTATGCTCAGAGGCGAAGGTAACAATACAATGACTACCTCTAGACAAGAAAGCTCTAGTGGAAATGTCAGTGAGAGTTTGATGGATTCATCAAGCTCGAACAATTTTAATGAGGCCAAAATCAAGGTGGTTGGTGTAGGAGGTGGTGGATCAAATGCAGTTAATCGCATGATTGAGAGCTCTATGAAGGGTGTAGAGTTTTGGATTGTGAACACGGATATCCAAGCAATGAGGATGTCACCTGTAAATCCTGAGTATAGACTGCCAATAGGTCAAGAACTCACAAGGGGACTTGGTGCAGGCGGTAATCCAGATATAGGGATGAATGCTGCCAATGAGAGCAAGCAGGCCATTGAGGAAGCAGTTTACGGCTCAGACATGGTTTTTGTGACT : GCTGGAATGGGTGGAGGAACAGGGACTGGTGCGGCTCCTATAATTGCAGGAACTGCCAAATCAATGGGTATCTTAACTGTTGGTATCGTTACAACCCCCTTTTCTTTTGAGGGACGAAGAAGAGCAGTTCAAGCCCAAGAAGGAATTGCAGCTTTGAGAGAAAATGTTGATACTCTGATTGTCATTCCAAATGACAAATTATTGACAGCTGTTTCTCCATCAACCCCAGTAACTGAAGCTTTTAACCTGGCTGATGATATTCTTCGGCAAGGAGTTCGTGGTATTTCTGATATAATTACG : ATTCCTGGGCTAGTAAATGTGGATTTTGCTGATGTGCGTGCTATTATGGCAAATGCTGGGTCTTCTTTAATGGGAATAGGAACTGCTACAG : GAAAGACCAGAGCGAGAGATGCAGCATTGAACGCCATTCAATCTCCTCTGCTGGATATCGGTATAGAGAGGGCTACTGGAATTGTGTGGAATATAACTGGTGGTAGTGATCTAACATTATTTGAG : GTAAATGCTGCAGCAGAGGTTATATATGACCTTGTGGATCCAAGTGCTAACCTCATTTTTGGGGCGGTGATAGACCCATCAATAAGTGGACAG : GTCAGCATAACGCTGATTGCCACTGGTTTCAAGCGCCAAGAAGAAAGTGATATGAGGCCCCTCCAG : GGAAACCAACTAGCACAGGGAGATGCTTCACTTGGAACTAACAGACGACCTGCGTCCTTTCTGGAAGGTGGTTCAGTGGAAATTCCTGAGTTCCTCAGGAAAAAAGGGCGATTGCGCTATCCAAGAGCTTAA : GATCTTGGTTATGCATCGACTATCAAGTTTATCTCATGGAAAAACCATTGTCCATCTCGTTTTTCTT</gDNA_template>
            <first_frame> *  *  P  K  L  C  L  S  L  Y  F  F  K  I  S  K  D  L  C  N  S  L  F  G  F  L  S  L  Q  F  Q  :  V  L  K  E  K  T  G  L  E  L  Q  I  L  S  R  R  S  I  I  F  F  L  D  *  S  E  *  F  E  L  E  F  G  N  I  L  L  W  L  L  V  R  Q  L  Y  L  C  L  L  I  R  G  G  H  E  G  S  *  L  F  L  V  V  E  F  A  P  *  K  F  K  M  R  R  L  D  T  W  A  L  T  K  R  V  P  Q  V  C  L  N  S  N  V  Q  P  I  P  R  V  S  I  S  I  K  T  K  T  P  F  *  I  Y  I  P  K  F  L  C  S  E  A  K  V  T  I  Q  *  L  P  L  D  K  K  A  L  V  E  M  S  V  R  V  *  W  I  H  Q  A  R  T  I  L  M  R  P  K  S  R  W  L  V  *  E  V  V  D  Q  M  Q  L  I  A  *  L  R  A  L  *  R  V  *  S  F  G  L  *  T  R  I  S  K  Q  *  G  C  H  L  *  I  L  S  I  D  C  Q  *  V  K  N  S  Q  G  D  L  V  Q  A  V  I  Q  I  *  G  *  M  L  P  M  R  A  S  R  P  L  R  K  Q  F  T  A  Q  T  W  F  L  *  L :   L  E  W  V  E  E  Q  G  L  V  R  L  L  *  L  Q  E  L  P  N  Q  W  V  S  *  L  L  V  S  L  Q  P  P  F  L  L  R  D  E  E  E  Q  F  K  P  K  K  E  L  Q  L  *  E  K  M  L  I  L  *  L  S  F  Q  M  T  N  Y  *  Q  L  F  L  H  Q  P  Q  *  L  K  L  L  T  W  L  M  I  F  F  G  K  E  F  V  V  F  L  I  *  L  R :   F  L  G  *  *  M  W  I  L  L  M  C  V  L  L  W  Q  M  L  G  L  L  *  W  E  *  E  L  L  Q  :  E  R  P  E  R  E  M  Q  H  *  T  P  F  N  L  L  C  W  I  S  V  *  R  G  L  L  E  L  C  G  I  *  L  V  V  V  I  *  H  Y  L  R :   *  M  L  Q  Q  R  L  Y  M  T  L  W  I  Q  V  L  T  S  F  L  G  R  *  *  T  H  Q  *  V  D  R :   S  A  *  R  *  L  P  L  V  S  S  A  K  K  K  V  I  *  G  P  S  R :   E  T  N  *  H  R  E  M  L  H  L  E  L  T  D  D  L  R  P  F  W  K  V  V  Q  W  K  F  L  S  S  S  G  K  K  G  D  C  A  I  Q  E  L  K :   I  L  V  M  H  R  L  S  S  L  S  H  G  K  T  I  V  H  L  V  F  L </first_frame>
            <second_frame>  S  S  Q  N  S  V  F  L  Y  I  S  S  K  F  Q  R  I  C  A  I  L  F  L  G  F  C  L  F  N  F  R :   C  *  K  K  K  L  D  W  N  F  R  Y  Y  L  G  G  R  L  Y  F  F  W  I  N  Q  N  S  L  S  L  S  L  G  I  F  C  Y  G  Y  L  Y  V  S  C  I  Y  A  S  *  Y  A  A  V  T  R  G  L  D  C  S  W  W  *  S  L  P  L  E  N  S  R  *  E  D  W  I  L  G  R  *  P  K  G  Y  L  K  F  A  S  I  Q  M  F  S  Q  F  P  E  C  Q  S  V  S  K  Q  R  P  L  S  K  F  T  S  R  N  F  Y  A  Q  R  R  R  *  Q  Y  N  D  Y  L  *  T  R  K  L  *  W  K  C  Q  *  E  F  D  G  F  I  K  L  E  Q  F  *  *  G  Q  N  Q  G  G  W  C  R  R  W  W  I  K  C  S  *  S  H  D  *  E  L  Y  E  G  C  R  V  L  D  C  E  H  G  Y  P  S  N  E  D  V  T  C  K  S  *  V  *  T  A  N  R  S  R  T  H  K  G  T  W  C  R  R  *  S  R  Y  R  D  E  C  C  Q  *  E  Q  A  G  H  *  G  S  S  L  R  L  R  H  G  F  C  D   : C  W  N  G  W  R  N  R  D  W  C  G  S  Y  N  C  R  N  C  Q  I  N  G  Y  L  N  C  W  Y  R  Y  N  P  L  F  F  *  G  T  K  K  S  S  S  S  P  R  R  N  C  S  F  E  R  K  C  *  Y  S  D  C  H  S  K  *  Q  I  I  D  S  C  F  S  I  N  P  S  N  *  S  F  *  P  G  *  *  Y  S  S  A  R  S  S  W  Y  F  *  Y  N  Y   : D  S  W  A  S  K  C  G  F  C  *  C  A  C  Y  Y  G  K  C  W  V  F  F  N  G  N  R  N  C  Y  R :   K  D  Q  S  E  R  C  S  I  E  R  H  S  I  S  S  A  G  Y  R  Y  R  E  G  Y  W  N  C  V  E  Y  N  W  W  *  *  S  N  I  I  *   : G  K  C  C  S  R  G  Y  I  *  P  C  G  S  K  C  *  P  H  F  W  G  G  D  R  P  I  N  K  W  T   : G  Q  H  N  A  D  C  H  W  F  Q  A  P  R  R  K  *  Y  E  A  P  P   : G  K  P  T  S  T  G  R  C  F  T  W  N  *  Q  T  T  C  V  L  S  G  R  W  F  S  G  N  S  *  V  P  Q  E  K  R  A  I  A  L  S  K  S  L   : R  S  W  L  C  I  D  Y  Q  V  Y  L  M  E  K  P  L  S  I  S  F  F   </second_frame>
            <third_frame>   V  A  K  T  L  S  F  S  I  F  L  Q  N  F  K  G  F  V  Q  F  S  F  W  V  F  V  S  S  I  S   : G  A  E  R  K  N  W  T  G  T  S  D  I  I  *  E  V  D  Y  I  F  S  G  L  I  R  I  V  *  A  *  V  W  E  Y  S  V  M  A  T  C  T  S  A  V  F  M  P  P  D  T  R  R  S  R  G  V  L  T  V  L  G  G  R  V  C  P  L  K  I  Q  D  E  K  I  G  Y  L  G  V  N  Q  K  G  T  S  S  L  P  Q  F  K  C  S  A  N  S  Q  S  V  N  Q  Y  Q  N  K  D  P  F  L  N  L  H  P  E  I  S  M  L  R  G  E  G  N  N  T  M  T  T  S  R  Q  E  S  S  S  G  N  V  S  E  S  L  M  D  S  S  S  S  N  N  F  N  E  A  K  I  K  V  V  G  V  G  G  G  G  S  N  A  V  N  R  M  I  E  S  S  M  K  G  V  E  F  W  I  V  N  T  D  I  Q  A  M  R  M  S  P  V  N  P  E  Y  R  L  P  I  G  Q  E  L  T  R  G  L  G  A  G  G  N  P  D  I  G  M  N  A  A  N  E  S  K  Q  A  I  E  E  A  V  Y  G  S  D  M  V  F  V  T  :  A  G  M  G  G  G  T  G  T  G  A  A  P  I  I  A  G  T  A  K  S  M  G  I  L  T  V  G  I  V  T  T  P  F  S  F  E  G  R  R  R  A  V  Q  A  Q  E  G  I  A  A  L  R  E  N  V  D  T  L  I  V  I  P  N  D  K  L  L  T  A  V  S  P  S  T  P  V  T  E  A  F  N  L  A  D  D  I  L  R  Q  G  V  R  G  I  S  D  I  I  T  :  I  P  G  L  V  N  V  D  F  A  D  V  R  A  I  M  A  N  A  G  S  S  L  M  G  I  G  T  A  T   : G  K  T  R  A  R  D  A  A  L  N  A  I  Q  S  P  L  L  D  I  G  I  E  R  A  T  G  I  V  W  N  I  T  G  G  S  D  L  T  L  F  E  :  V  N  A  A  A  E  V  I  Y  D  L  V  D  P  S  A  N  L  I  F  G  A  V  I  D  P  S  I  S  G  Q  :  V  S  I  T  L  I  A  T  G  F  K  R  Q  E  E  S  D  M  R  P  L  Q  :  G  N  Q  L  A  Q  G  D  A  S  L  G  T  N  R  R  P  A  S  F  L  E  G  G  S  V  E  I  P  E  F  L  R  K  K  G  R  L  R  Y  P  R  A  *  :  D  L  G  Y  A  S  T  I  K  F  I  S  W  K  N  H  C  P  S  R  F  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75295" stop="74648"/>
                    <exon start="72163" stop="71864"/>
                    <exon start="67049" stop="66959"/>
                    <exon start="60957" stop="60833"/>
                    <exon start="59109" stop="59017"/>
                    <exon start="58443" stop="58378"/>
                    <exon start="58273" stop="58142"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1452</number_coding_nucleotides>
                  <number_encoded_amino_acids>484</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VWEYSVMATCTSAVFMPPDTRRSRGVLTVLGGRVCPLKIQDEKIGYLGVNQKGTSSLPQFKCSANSQSVNQYQNKDPFLNLHPEISMLRGEGNNTMTTSRQESSSGNVSESLMDSSSSNNFNEAKIKVVGVGGGGSNAVNRMIESSMKGVEFWIVNTDIQAMRMSPVNPEYRLPIGQELTRGLGAGGNPDIGMNAANESKQAIEEAVYGSDMVFVTAGMGGGTGTGAAPIIAGTAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRENVDTLIVIPNDKLLTAVSPSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPSANLIFGAVIDPSISGQVSITLIATGFKRQEESDMRPLQGNQLAQGDASLGTNRRPASFLEGGSVEIPEFLRKKGRLRYPRA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="77135" e_stop="77106"/>
            <exon e_start="75387" e_stop="74851"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.467" acc_prob="0.998" e_score="0.967"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="77135" e_stop="77106" e_length="30"/>
          </exon>
          <intron i_serial="1" don_prob="0.467" acc_prob="0.998">
            <gDNA_intron_boundary i_start="77105" i_stop="75388" i_length="1718"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="75387" e_stop="74851" e_length="537"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77135" stop="77106"/>
              <exon start="75387" stop="74928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366158" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75387" stop="74851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329084" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTGTGAGCTGAATACAACACCACCAATA : GTGCTGAAAGAAAAAACTGGACTGGAACTTCAGATATTATCTAGGAGGTCGATTATATTTTTTCTGGATTAATCAGAATAGTTTGAGCTTGAGTTTGGGAATATTCTGTTATGGCTACTTGTACGTCAGCTGTATTTATGCCTCCTGATACGCGGCGGTCACGAGGGGTCTTGACTGTTCTTGGTGGTAGAGTTTGCCCCTTGAAAATTCAAGATGAGAAGATTGGATACTTGGGCGTTAACCAAAAGGGTACCTCAAGTTTGCCTCAATTCAAATGTTCAGCCAATTCCCAGAGTGTCAATCAGTATCAAAACAAAGACCCCTTTCTAAATTTACATCCCGAAATTTCTATGCTCAGAGGCGAAGGTAACAATACAATGACTACCTCTAGACAAGAAAGCTCTAGTGGAAATGTCAGTGAGAGTTTGATGGATTCATCAAGCTCGAACAATTTTAATGAGGCCAAAATCAAGGTGGTTGGTGTAGGAGGTGGTGGATCAAATGCAGTTAATCGCATGATTGAGAGCTCTATGAAGG</gDNA_template>
            <first_frame> L  C  E  L  N  T  T  P  P  I  :  V  L  K  E  K  T  G  L  E  L  Q  I  L  S  R  R  S  I  I  F  F  L  D  *  S  E  *  F  E  L  E  F  G  N  I  L  L  W  L  L  V  R  Q  L  Y  L  C  L  L  I  R  G  G  H  E  G  S  *  L  F  L  V  V  E  F  A  P  *  K  F  K  M  R  R  L  D  T  W  A  L  T  K  R  V  P  Q  V  C  L  N  S  N  V  Q  P  I  P  R  V  S  I  S  I  K  T  K  T  P  F  *  I  Y  I  P  K  F  L  C  S  E  A  K  V  T  I  Q  *  L  P  L  D  K  K  A  L  V  E  M  S  V  R  V  *  W  I  H  Q  A  R  T  I  L  M  R  P  K  S  R  W  L  V  *  E  V  V  D  Q  M  Q  L  I  A  *  L  R  A  L  *  R </first_frame>
            <second_frame>  F  V  S  *  I  Q  H  H  Q  * :   C  *  K  K  K  L  D  W  N  F  R  Y  Y  L  G  G  R  L  Y  F  F  W  I  N  Q  N  S  L  S  L  S  L  G  I  F  C  Y  G  Y  L  Y  V  S  C  I  Y  A  S  *  Y  A  A  V  T  R  G  L  D  C  S  W  W  *  S  L  P  L  E  N  S  R  *  E  D  W  I  L  G  R  *  P  K  G  Y  L  K  F  A  S  I  Q  M  F  S  Q  F  P  E  C  Q  S  V  S  K  Q  R  P  L  S  K  F  T  S  R  N  F  Y  A  Q  R  R  R  *  Q  Y  N  D  Y  L  *  T  R  K  L  *  W  K  C  Q  *  E  F  D  G  F  I  K  L  E  Q  F  *  *  G  Q  N  Q  G  G  W  C  R  R  W  W  I  K  C  S  *  S  H  D  *  E  L  Y  E   </second_frame>
            <third_frame>   L  *  A  E  Y  N  T  T  N   : S  A  E  R  K  N  W  T  G  T  S  D  I  I  *  E  V  D  Y  I  F  S  G  L  I  R  I  V  *  A  *  V  W  E  Y  S  V  M  A  T  C  T  S  A  V  F  M  P  P  D  T  R  R  S  R  G  V  L  T  V  L  G  G  R  V  C  P  L  K  I  Q  D  E  K  I  G  Y  L  G  V  N  Q  K  G  T  S  S  L  P  Q  F  K  C  S  A  N  S  Q  S  V  N  Q  Y  Q  N  K  D  P  F  L  N  L  H  P  E  I  S  M  L  R  G  E  G  N  N  T  M  T  T  S  R  Q  E  S  S  S  G  N  V  S  E  S  L  M  D  S  S  S  S  N  N  F  N  E  A  K  I  K  V  V  G  V  G  G  G  G  S  N  A  V  N  R  M  I  E  S  S  M  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75295" stop="74852"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>444</number_coding_nucleotides>
                  <number_encoded_amino_acids>148</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VWEYSVMATCTSAVFMPPDTRRSRGVLTVLGGRVCPLKIQDEKIGYLGVNQKGTSSLPQFKCSANSQSVNQYQNKDPFLNLHPEISMLRGEGNNTMTTSRQESSSGNVSESLMDSSSSNNFNEAKIKVVGVGGGGSNAVNRMIESSMK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="59055" e_stop="59017"/>
            <exon e_start="58443" e_stop="58378"/>
            <exon e_start="58273" e_stop="57770"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.929" e_score="0.974"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="59055" e_stop="59017" e_length="39"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.929">
            <gDNA_intron_boundary i_start="59016" i_stop="58444" i_length="573"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58443" e_stop="58378" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="58377" i_stop="58274" i_length="104"/>
          </intron>
          <exon e_serial="3" e_score="0.919">
            <gDNA_exon_boundary e_start="58273" e_stop="57770" e_length="504"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59055" stop="59017"/>
              <exon start="58443" stop="58378"/>
              <exon start="58273" stop="57770"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366159" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTTTGGGGCGGTGATAGACCCATCAATAAGTGGACAG : GTCAGCATAACGCTGATTGCCACTGGTTTCAAGCGCCAAGAAGAAAGTGATATGAGGCCCCTCCAG : GGAAACCAACTAGCACAGGGAGATGCTTCACTTGGAACTAACAGACGACCTGCGTCCTTTCTGGAAGGTGGTTCAGTGGAAATTCCTGAGTTCCTCAGGAAAAAAGGGCGATTGCGCTATCCAAGAGCTTAAGTTAGTCCTTCATTTTCCTGCATGTATAGTACTTCCCTTTTTCTTCTTGTTCTCCAACATCTCTATCTTTCAAAGTGATACATATGCGTTATACATACAGGATCTTGGTTATGCATCGACTATCAAGTTTATCTCATGGAAAAACCATTGTCCATCTCGTTTTTCTTTATAATAATGTAGAATTGCCTATACATGTTAGTTTGCTAGTGAGTGTAATAAAGCTGGAGATACTATCAAAGGTAGACAATTAGGATCACAATCAGTCTGGTTTCACCTATGATCTGTAAAGTGTTGCTGTAAAGTTGATATCCATTGACGAACTTGTGCACATATATGTGATTTAGGTTCAGTTTTGAACTTGTTCATCAGCTT</gDNA_template>
            <first_frame> I  F  G  A  V  I  D  P  S  I  S  G  Q  :  V  S  I  T  L  I  A  T  G  F  K  R  Q  E  E  S  D  M  R  P  L  Q  :  G  N  Q  L  A  Q  G  D  A  S  L  G  T  N  R  R  P  A  S  F  L  E  G  G  S  V  E  I  P  E  F  L  R  K  K  G  R  L  R  Y  P  R  A  *  V  S  P  S  F  S  C  M  Y  S  T  S  L  F  L  L  V  L  Q  H  L  Y  L  S  K  *  Y  I  C  V  I  H  T  G  S  W  L  C  I  D  Y  Q  V  Y  L  M  E  K  P  L  S  I  S  F  F  F  I  I  M  *  N  C  L  Y  M  L  V  C  *  *  V  *  *  S  W  R  Y  Y  Q  R  *  T  I  R  I  T  I  S  L  V  S  P  M  I  C  K  V  L  L  *  S  *  Y  P  L  T  N  L  C  T  Y  M  *  F  R  F  S  F  E  L  V  H  Q  L </first_frame>
            <second_frame>  F  L  G  R  *  *  T  H  Q  *  V  D  R :   S  A  *  R  *  L  P  L  V  S  S  A  K  K  K  V  I  *  G  P  S  R :   E  T  N  *  H  R  E  M  L  H  L  E  L  T  D  D  L  R  P  F  W  K  V  V  Q  W  K  F  L  S  S  S  G  K  K  G  D  C  A  I  Q  E  L  K  L  V  L  H  F  P  A  C  I  V  L  P  F  F  F  L  F  S  N  I  S  I  F  Q  S  D  T  Y  A  L  Y  I  Q  D  L  G  Y  A  S  T  I  K  F  I  S  W  K  N  H  C  P  S  R  F  S  L  *  *  C  R  I  A  Y  T  C  *  F  A  S  E  C  N  K  A  G  D  T  I  K  G  R  Q  L  G  S  Q  S  V  W  F  H  L  *  S  V  K  C  C  C  K  V  D  I  H  *  R  T  C  A  H  I  C  D  L  G  S  V  L  N  L  F  I  S   </second_frame>
            <third_frame>   F  W  G  G  D  R  P  I  N  K  W  T   : G  Q  H  N  A  D  C  H  W  F  Q  A  P  R  R  K  *  Y  E  A  P  P   : G  K  P  T  S  T  G  R  C  F  T  W  N  *  Q  T  T  C  V  L  S  G  R  W  F  S  G  N  S  *  V  P  Q  E  K  R  A  I  A  L  S  K  S  L  S  *  S  F  I  F  L  H  V  *  Y  F  P  F  S  S  C  S  P  T  S  L  S  F  K  V  I  H  M  R  Y  T  Y  R  I  L  V  M  H  R  L  S  S  L  S  H  G  K  T  I  V  H  L  V  F  L  Y  N  N  V  E  L  P  I  H  V  S  L  L  V  S  V  I  K  L  E  I  L  S  K  V  D  N  *  D  H  N  Q  S  G  F  T  Y  D  L  *  S  V  A  V  K  L  I  S  I  D  E  L  V  H  I  Y  V  I  *  V  Q  F  *  T  C  S  S  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58260" stop="57970"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HREMLHLELTDDLRPFWKVVQWKFLSSSGKKGDCAIQELKLVLHFPACIVLPFFFLFSNISIFQSDTYALYIQDLGYASTIKFISWKNHCPSRFSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59055" stop="59017"/>
                    <exon start="58443" stop="58378"/>
                    <exon start="58273" stop="58142"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFGAVIDPSISGQVSITLIATGFKRQEESDMRPLQGNQLAQGDASLGTNRRPASFLEGGSVEIPEFLRKKGRLRYPRA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="5" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58112" stop="57891"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YFPFSSCSPTSLSFKVIHMRYTYRILVMHRLSSLSHGKTIVHLVFLYNNVELPIHVSLLVSVIKLEILSKVDN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="85223" PGL_stop="86402"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85223" e_stop="86402"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="85223" e_stop="86402" e_length="1180"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85223" stop="85991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85668" stop="86402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213960" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTTATCCACCGGAGTGACTTGCCTATGTAGAGGGGCCGGAAATCTTGGGAACTAAGTCACCTCTCAATCGTCGAAATTCCTTCCAAATCTTAGATCCCAAAAATTATCTCCACCATAGGCCCACCTAATTTCTTGGACCTTCAATTCTCCTTGACATGACATTCTAAACAAATTCTGAAGATTATCTTTCAGTGAGTTATCTCTACCCAACCTACGTCCCGGGAAATTCTCTCCTTCCATTCCAACCTTGAATGAGATACTTTTGCTAAAATCATCCCATCCCTTCATTATGTTCCTCCACAAACCGCACCCAAAAGGCATAATGACATCTCTAGTTCTCCTAAATCTGCTTCCCACTAGACAAATAGGTCTGTAGTCCTCCATGCACCATGCTCCTCCCTCTTAGGGGTAATGACAACTAATGAAGCATTCAAACTCTTTTCAAATACACCACTTCCCTGGAAGTCAACAACTGTATCTATTAAATCAGATCTAACCATTTTCCTGCAGTGCTCAAAAAAATCCGTAGAGGCATCAGGTGCCAGAGCTTTGTTACTAGCACAACCCTCTACCGCCCTCTTCAACTCTTCCTCCTGAATTTCCCTCTCTAGCCATTCACTCTCCTCCCTGCCAATATGACGAACCCTAAACCCCCCAATTTAGGCCCCCAATCTGCTACCTCTAACAAACGCTTGTAAAAATCTACAATTGCCTTTTCTACTTCCTCCTTTTCCACATGCATCACCCATTTACCTTTTCCGACTATATAAAAGTCCTTCTCCTATTAGCAGTTACTACCCTATGGAAATGTTTTTTGTTGGAGTCCCCCTCTACAACCATTATGACCCTCAAGTTCTGTGTCAAACCAATCTCTTGGGCCAAAGCCAACTCATCTAGCTCCCTTTTCAACCCCTCTAAAATTGTTCTTTCCTCAATTATTACAAGACTAATGACTTAATTCATGTGTAACTTCGTTCAAGGCTTCAAGCTTCAAATTTGCGATGATCATCAAATGGAGAATATTGCCATCTGGTTTTTTGTTTTAGAGGAGGATAAAAAAGTTGGCAAATGGGCTATTCTAGTGGTATGATGTAAGCAACTTTGAAGAACTTGAATGATATTTTATCAGGTAACACCTCTGCCAATTCCTTCTCAACGAAAAAGCACTAAAGCAATTAA</gDNA_template>
            <first_frame> G  Y  P  P  E  *  L  A  Y  V  E  G  P  E  I  L  G  T  K  S  P  L  N  R  R  N  S  F  Q  I  L  D  P  K  N  Y  L  H  H  R  P  T  *  F  L  G  P  S  I  L  L  D  M  T  F  *  T  N  S  E  D  Y  L  S  V  S  Y  L  Y  P  T  Y  V  P  G  N  S  L  L  P  F  Q  P  *  M  R  Y  F  C  *  N  H  P  I  P  S  L  C  S  S  T  N  R  T  Q  K  A  *  *  H  L  *  F  S  *  I  C  F  P  L  D  K  *  V  C  S  P  P  C  T  M  L  L  P  L  R  G  N  D  N  *  *  S  I  Q  T  L  F  K  Y  T  T  S  L  E  V  N  N  C  I  Y  *  I  R  S  N  H  F  P  A  V  L  K  K  I  R  R  G  I  R  C  Q  S  F  V  T  S  T  T  L  Y  R  P  L  Q  L  F  L  L  N  F  P  L  *  P  F  T  L  L  P  A  N  M  T  N  P  K  P  P  N  L  G  P  Q  S  A  T  S  N  K  R  L  *  K  S  T  I  A  F  S  T  S  S  F  S  T  C  I  T  H  L  P  F  P  T  I  *  K  S  F  S  Y  *  Q  L  L  P  Y  G  N  V  F  C  W  S  P  P  L  Q  P  L  *  P  S  S  S  V  S  N  Q  S  L  G  P  K  P  T  H  L  A  P  F  S  T  P  L  K  L  F  F  P  Q  L  L  Q  D  *  *  L  N  S  C  V  T  S  F  K  A  S  S  F  K  F  A  M  I  I  K  W  R  I  L  P  S  G  F  L  F  *  R  R  I  K  K  L  A  N  G  L  F  *  W  Y  D  V  S  N  F  E  E  L  E  *  Y  F  I  R  *  H  L  C  Q  F  L  L  N  E  K  A  L  K  Q  L  </first_frame>
            <second_frame>  V  I  H  R  S  D  L  P  M  *  R  G  R  K  S  W  E  L  S  H  L  S  I  V  E  I  P  S  K  S  *  I  P  K  I  I  S  T  I  G  P  P  N  F  L  D  L  Q  F  S  L  T  *  H  S  K  Q  I  L  K  I  I  F  Q  *  V  I  S  T  Q  P  T  S  R  E  I  L  S  F  H  S  N  L  E  *  D  T  F  A  K  I  I  P  S  L  H  Y  V  P  P  Q  T  A  P  K  R  H  N  D  I  S  S  S  P  K  S  A  S  H  *  T  N  R  S  V  V  L  H  A  P  C  S  S  L  L  G  V  M  T  T  N  E  A  F  K  L  F  S  N  T  P  L  P  W  K  S  T  T  V  S  I  K  S  D  L  T  I  F  L  Q  C  S  K  K  S  V  E  A  S  G  A  R  A  L  L  L  A  Q  P  S  T  A  L  F  N  S  S  S  *  I  S  L  S  S  H  S  L  S  S  L  P  I  *  R  T  L  N  P  P  I  *  A  P  N  L  L  P  L  T  N  A  C  K  N  L  Q  L  P  F  L  L  P  P  F  P  H  A  S  P  I  Y  L  F  R  L  Y  K  S  P  S  P  I  S  S  Y  Y  P  M  E  M  F  F  V  G  V  P  L  Y  N  H  Y  D  P  Q  V  L  C  Q  T  N  L  L  G  Q  S  Q  L  I  *  L  P  F  Q  P  L  *  N  C  S  F  L  N  Y  Y  K  T  N  D  L  I  H  V  *  L  R  S  R  L  Q  A  S  N  L  R  *  S  S  N  G  E  Y  C  H  L  V  F  C  F  R  G  G  *  K  S  W  Q  M  G  Y  S  S  G  M  M  *  A  T  L  K  N  L  N  D  I  L  S  G  N  T  S  A  N  S  F  S  T  K  K  H  *  S  N  * </second_frame>
            <third_frame>   L  S  T  G  V  T  C  L  C  R  G  A  G  N  L  G  N  *  V  T  S  Q  S  S  K  F  L  P  N  L  R  S  Q  K  L  S  P  P  *  A  H  L  I  S  W  T  F  N  S  P  *  H  D  I  L  N  K  F  *  R  L  S  F  S  E  L  S  L  P  N  L  R  P  G  K  F  S  P  S  I  P  T  L  N  E  I  L  L  L  K  S  S  H  P  F  I  M  F  L  H  K  P  H  P  K  G  I  M  T  S  L  V  L  L  N  L  L  P  T  R  Q  I  G  L  *  S  S  M  H  H  A  P  P  S  *  G  *  *  Q  L  M  K  H  S  N  S  F  Q  I  H  H  F  P  G  S  Q  Q  L  Y  L  L  N  Q  I  *  P  F  S  C  S  A  Q  K  N  P  *  R  H  Q  V  P  E  L  C  Y  *  H  N  P  L  P  P  S  S  T  L  P  P  E  F  P  S  L  A  I  H  S  P  P  C  Q  Y  D  E  P  *  T  P  Q  F  R  P  P  I  C  Y  L  *  Q  T  L  V  K  I  Y  N  C  L  F  Y  F  L  L  F  H  M  H  H  P  F  T  F  S  D  Y  I  K  V  L  L  L  L  A  V  T  T  L  W  K  C  F  L  L  E  S  P  S  T  T  I  M  T  L  K  F  C  V  K  P  I  S  W  A  K  A  N  S  S  S  S  L  F  N  P  S  K  I  V  L  S  S  I  I  T  R  L  M  T  *  F  M  C  N  F  V  Q  G  F  K  L  Q  I  C  D  D  H  Q  M  E  N  I  A  I  W  F  F  V  L  E  E  D  K  K  V  G  K  W  A  I  L  V  V  *  C  K  Q  L  *  R  T  *  M  I  F  Y  Q  V  T  P  L  P  I  P  S  Q  R  K  S  T  K  A  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85909" stop="86181"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTLVKIYNCLFYFLLFHMHHPFTFSDYIKVLLLLAVTTLWKCFLLESPSTTIMTLKFCVKPISWAKANSSSSLFNPSKIVLSSIITRLMT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85584" stop="85820"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TNRSVVLHAPCSSLLGVMTTNEAFKLFSNTPLPWKSTTVSIKSDLTIFLQCSKKSVEASGARALLLAQPSTALFNSSS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85887" stop="86120"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>APNLLPLTNACKNLQLPFLLPPFPHASPIYLFRLYKSPSPISSYYPMEMFFVGVPLYNHYDPQVLCQTNLLGQSQLI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0076D18.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85402" stop="85599"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLSFSELSLPNLRPGKFSPSIPTLNEILLLKSSHPFIMFLHKPHPKGIMTSLVLLNLLPTRQIGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 101 chains have been computed
$ 
$ memory statistics:
$ 542296 bytes spliced alignments in total
$ 67 spliced alignments have been stored
$ 8093 bytes was the average size of a spliced alignment
$ 19096 bytes predicted gene locations in total
$ 10 predicted gene locations have been stored
$ 1909 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 114 backtrace matrices have been allocated
$ 
$ date finished: 2008-11-20 23:09:48
-->
