<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-02-20 11:23:19"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E340947" ref_strand="+" ref_description="SGN-E340947 [cTOF-5-I12]">
      <seq>tcatccatagcagagacatggacatgtcaaatcctgccgtctttgtcaatgctgagttcctcaaggagcatgtaggacggaaggttcgaacagtggttcaggttatgcaatctgatggtgataaagtcattggaaaatccacggatgaaaaagaattagttgtgaaaggaaatccacctaatgctctttcaacttttgttgaagtaattggtatagctgacactatccagtctattgaagcagaaatttggaccaattttggtgatacatttgatgttaatagctatgacaaggtgtgcagactagcaaatggtgacagtaagcacttgtttatctgagaaatgatttataaaagaggacatatatcctcttatttctgctgcattgttccagagtttcaatgtattataagtagtttgaagtactcctgaaaactttggattttcagcttctatttagggtttcatcaacagaagttaagctctgtgcttagatgtaaacttgtttttcttcaacttatgctatttggtattttgaacactaatatttgtggttccactagttagtcaacttggcattaaactagctgtgttacatacataagttgtaacttgtaagtatgaactatgtctagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="6900" stop="4582"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6598" g_stop="6341" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="273" r_length="258" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6340" i_stop="5246" i_length="1095">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5245" g_stop="4882" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="637" r_length="364" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E340947" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6598" e_stop="6341"/>
          <exon e_start="5245" e_stop="4882"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATGGACATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTGGTATGTCTTGCTTATGTTATTCATATATATACACTTGGCTTCTCCTATATCCGTTAATGCATTTGAATGTCAATTTGTACCAAATTTGTTTCACTGGCAATCAAATCCATGATTTTATTACTTGTTGTTTCTTTTGCTTCATTTACGTCTTTTTTGTCGTTTTGCTACTGTTCTTCTCCTTTATCTTTAGCATTATTTTCTCATTACTGTATTTTCTTCCATACTTGAGTTTGATATGTTATACTTGAACCGAGGGTCTATCACAAATAGTCACTCTATCTTCACAAGGTAGTAAGACTATATACACACCACCCTCCCCAAACTCCACTCGTGGAATTACACTGGGTTTGTTATTGTTGTTTTGCCCTTCTTTATGTCTTGTTCTGCGTATTTTTTCAAGGTCATTTTGTAAGTTGCGAATATAGAACTGCCTAAGGCCAATGAACCATATAGTCTTCATACTCATCACTGAAAAGGAAAAGGATGGTGTTCTTTGATAAAGTTCATAACCCTATAATTGATGATAACACTATGAATATGCAAACTTTATGGTTATCATCTACCAGAAACCTTAAGATCTATAGATATTCAACAGATGAGTGGGTTGTAGTCAATTAAGTGAACTGAATAATAGATTGTAGAGTTAAACATTATTGTCCTTCCCAACTCGGCCAATTTTATCTTCATTCCTTCACTTCTCTGAAATGTTTCTATACAAATGGTGACTGGGGAGGGTAAAGTTTACGATGTCCCTGTTCTATATGAAATTCAAGGATTAAAACAAAGGGAGATTTGGTTAGTGCGACTTTTCAGGTTATGATATCTATATTTACGGTAGTGTTCTACTTTGTTTACAATCCTATCATCATGCGATAGCTGTTTTTATACTTGCTCTGTCAAACATATTCAAGACCAATGTAGTCATCAATTATGTCCAAACTGCATTTATTTTTGACACATTGTATAAGCATTTCATGTTGCTTGTTAAACTTCTACTCATGACTTAAGGTTTATAGAAACTTTATGATGTGTATCTAGTGCTTGTCTCTTGATGATATATACTTGCTAATCTACAAGTTCTTCAATATGTGACAGATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCTTCAACTTATGCTATTTGGTATTTTGAACACTAATATTTGTGGTTCCACTAGTTAGTCAACTTGGCATTAAACTAGCTGTGTTACATACATAAGTTGTAACTTGTAAGTATGAACTATGTCTAGTTC</genome_strand>
        <mrna_strand>ACATGGACATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCTTCAACTTATGCTATTTGGTATTTTGAACACTAATATTTGTGGTTCCACTAGTTAGTCAACTTGGCATTAAACTAGCTGTGTTACATACATAAGTTGTAACTTGTAAGTATGAACTATGTCTAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E308527" ref_strand="+" ref_description="SGN-E308527 [cLEY-21-N7]">
      <seq>ctcgtgccgaattcggcacgaggatccatagcagagacatggacatgtcaaatcctgccgtctttgtcaatgctgagttcctcaaggagcatgtaggacggaaggttcgaacagtggttcaggttatgcaatctgatggtgataaagtcattggaaaatccacggatgaaaaagaattagttgtgaaaggaaatccacctaatgctctttcaacttttgttgaagtaattggtatagctgacactatccagtctattgaagcagaaatttggaccaattttggtgatacatttgatgttaatagctatgacaaggtgtgcagactagcaaatggtgacagtaagcacttgtttatctgagaaatgatttataaaagaggacatatatcctcttatttctgctgcattgttccagagtttcaatgtattataagtagtttgaagtactcctgaaaactttggattttcagcttctatttagggtttcatcaacagaagttaagctctgtgcttagatgtaaacttgtttttcttcaacttatgctatttggtattttgaacactaatatttgtggttccactagttagtcaacttggcattaaactagctgtgttacatacataagttgtaacttgtaagtatgaactatgtctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="6900" stop="4585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6598" g_stop="6341" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="294" r_length="258" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6340" i_stop="5246" i_length="1095">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5245" g_stop="4885" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="655" r_length="361" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E308527" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6598" e_stop="6341"/>
          <exon e_start="5245" e_stop="4885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATGGACATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTGGTATGTCTTGCTTATGTTATTCATATATATACACTTGGCTTCTCCTATATCCGTTAATGCATTTGAATGTCAATTTGTACCAAATTTGTTTCACTGGCAATCAAATCCATGATTTTATTACTTGTTGTTTCTTTTGCTTCATTTACGTCTTTTTTGTCGTTTTGCTACTGTTCTTCTCCTTTATCTTTAGCATTATTTTCTCATTACTGTATTTTCTTCCATACTTGAGTTTGATATGTTATACTTGAACCGAGGGTCTATCACAAATAGTCACTCTATCTTCACAAGGTAGTAAGACTATATACACACCACCCTCCCCAAACTCCACTCGTGGAATTACACTGGGTTTGTTATTGTTGTTTTGCCCTTCTTTATGTCTTGTTCTGCGTATTTTTTCAAGGTCATTTTGTAAGTTGCGAATATAGAACTGCCTAAGGCCAATGAACCATATAGTCTTCATACTCATCACTGAAAAGGAAAAGGATGGTGTTCTTTGATAAAGTTCATAACCCTATAATTGATGATAACACTATGAATATGCAAACTTTATGGTTATCATCTACCAGAAACCTTAAGATCTATAGATATTCAACAGATGAGTGGGTTGTAGTCAATTAAGTGAACTGAATAATAGATTGTAGAGTTAAACATTATTGTCCTTCCCAACTCGGCCAATTTTATCTTCATTCCTTCACTTCTCTGAAATGTTTCTATACAAATGGTGACTGGGGAGGGTAAAGTTTACGATGTCCCTGTTCTATATGAAATTCAAGGATTAAAACAAAGGGAGATTTGGTTAGTGCGACTTTTCAGGTTATGATATCTATATTTACGGTAGTGTTCTACTTTGTTTACAATCCTATCATCATGCGATAGCTGTTTTTATACTTGCTCTGTCAAACATATTCAAGACCAATGTAGTCATCAATTATGTCCAAACTGCATTTATTTTTGACACATTGTATAAGCATTTCATGTTGCTTGTTAAACTTCTACTCATGACTTAAGGTTTATAGAAACTTTATGATGTGTATCTAGTGCTTGTCTCTTGATGATATATACTTGCTAATCTACAAGTTCTTCAATATGTGACAGATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCTTCAACTTATGCTATTTGGTATTTTGAACACTAATATTTGTGGTTCCACTAGTTAGTCAACTTGGCATTAAACTAGCTGTGTTACATACATAAGTTGTAACTTGTAAGTATGAACTATGTCTAG</genome_strand>
        <mrna_strand>ACATGGACATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCTTCAACTTATGCTATTTGGTATTTTGAACACTAATATTTGTGGTTCCACTAGTTAGTCAACTTGGCATTAAACTAGCTGTGTTACATACATAAGTTGTAACTTGTAAGTATGAACTATGTCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E318688" ref_strand="+" ref_description="SGN-E318688 [cTOB-9-E6]">
      <seq>atgtcaaatcctgccgtctttgtcaatgctgagttcctcaaggagcatgtaggacggaaggttcgaacagtggttcaggttatgcaatctgatggtgataaagtcattggaaaatccacggatgaaaaagaattagttgtgaaaggaaatccacctaatgctctttcaacttttgttgaagtaattggtatagctgacactatccagtctattgaagcagaaatttggaccaattttggtgatacatttgatgttaatagctatgacaaggtgtgcagactagcaaatggtgacagtgagcacttgtttatctgagaaatgatttataaaagaggacatatatcctcttatttctgctgcattgttccagagtgtcaatgtattataagtagtttgaagtactcctgaaaactttggattttcagcttctatttagggtttcatcaacagaaggtaagctctgtgcttagatgtaaacttgattttcttcaactgatgctatttggtattttgaacactaatatttgtggttccactagttagtcaacttggcattaaactagctgtgttacataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="6890" stop="4619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6590" g_stop="6341" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6340" i_stop="5246" i_length="1095">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5245" g_stop="4919" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="577" r_length="327" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E318688" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318688" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6590" e_stop="6341"/>
          <exon e_start="5245" e_stop="4919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTGGTATGTCTTGCTTATGTTATTCATATATATACACTTGGCTTCTCCTATATCCGTTAATGCATTTGAATGTCAATTTGTACCAAATTTGTTTCACTGGCAATCAAATCCATGATTTTATTACTTGTTGTTTCTTTTGCTTCATTTACGTCTTTTTTGTCGTTTTGCTACTGTTCTTCTCCTTTATCTTTAGCATTATTTTCTCATTACTGTATTTTCTTCCATACTTGAGTTTGATATGTTATACTTGAACCGAGGGTCTATCACAAATAGTCACTCTATCTTCACAAGGTAGTAAGACTATATACACACCACCCTCCCCAAACTCCACTCGTGGAATTACACTGGGTTTGTTATTGTTGTTTTGCCCTTCTTTATGTCTTGTTCTGCGTATTTTTTCAAGGTCATTTTGTAAGTTGCGAATATAGAACTGCCTAAGGCCAATGAACCATATAGTCTTCATACTCATCACTGAAAAGGAAAAGGATGGTGTTCTTTGATAAAGTTCATAACCCTATAATTGATGATAACACTATGAATATGCAAACTTTATGGTTATCATCTACCAGAAACCTTAAGATCTATAGATATTCAACAGATGAGTGGGTTGTAGTCAATTAAGTGAACTGAATAATAGATTGTAGAGTTAAACATTATTGTCCTTCCCAACTCGGCCAATTTTATCTTCATTCCTTCACTTCTCTGAAATGTTTCTATACAAATGGTGACTGGGGAGGGTAAAGTTTACGATGTCCCTGTTCTATATGAAATTCAAGGATTAAAACAAAGGGAGATTTGGTTAGTGCGACTTTTCAGGTTATGATATCTATATTTACGGTAGTGTTCTACTTTGTTTACAATCCTATCATCATGCGATAGCTGTTTTTATACTTGCTCTGTCAAACATATTCAAGACCAATGTAGTCATCAATTATGTCCAAACTGCATTTATTTTTGACACATTGTATAAGCATTTCATGTTGCTTGTTAAACTTCTACTCATGACTTAAGGTTTATAGAAACTTTATGATGTGTATCTAGTGCTTGTCTCTTGATGATATATACTTGCTAATCTACAAGTTCTTCAATATGTGACAGATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCTTCAACTTATGCTATTTGGTATTTTGAACACTAATATTTGTGGTTCCACTAGTTAGTCAACTTGGCATTAAACTAGCTGTGTTACATACA</genome_strand>
        <mrna_strand>ATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTGAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTGTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGGTAAGCTCTGTGCTTAGATGTAAACTTGATTTTCTTCAACTGATGCTATTTGGTATTTTGAACACTAATATTTGTGGTTCCACTAGTTAGTCAACTTGGCATTAAACTAGCTGTGTTACATACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E346024" ref_strand="+" ref_description="SGN-E346024 [cTOF-24-I14]">
      <seq>agacatggacatgtcaaatcctgccgtctttgtcaatgctgagttcctcaaggagcatgtaggacggaaggttcgaacagtggttcaggttatgcaatctgatggtgataaagtcattggaaaatccacggatgaaaaagaattagttgtgaaaggaaatccacctaatgctctttcaacttttgttgaagtaattggtatagctgacactatccagtctattgaagcagaaatttggaccaattttggtgatacatttgatgttaatagctatgacaaggtgtgcagactagcaaatggtgacagtaagcacttgtttatctgagaaatgatttataaaagaggacatatatcctcttatttctgctgcattgttccagagtttcaatgtattataagtagtttgaagtactcctgaaaactttggattttcagcttctatttagggtttcatcaacagaagttaagctctgtgcttagatgtaaacttgtttttcttcaacttatgcctatttggtattttgaacactaatattttgtggttccactagttagtcaacttggcattaaactaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="6900" stop="4634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6600" g_stop="6341" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6340" i_stop="5246" i_length="1095">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5245" g_stop="4934" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="574" r_length="314" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="575" polyA_stop="588"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E346024" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6600" e_stop="6341"/>
          <exon e_start="5245" e_stop="4934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACATGGACATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTGGTATGTCTTGCTTATGTTATTCATATATATACACTTGGCTTCTCCTATATCCGTTAATGCATTTGAATGTCAATTTGTACCAAATTTGTTTCACTGGCAATCAAATCCATGATTTTATTACTTGTTGTTTCTTTTGCTTCATTTACGTCTTTTTTGTCGTTTTGCTACTGTTCTTCTCCTTTATCTTTAGCATTATTTTCTCATTACTGTATTTTCTTCCATACTTGAGTTTGATATGTTATACTTGAACCGAGGGTCTATCACAAATAGTCACTCTATCTTCACAAGGTAGTAAGACTATATACACACCACCCTCCCCAAACTCCACTCGTGGAATTACACTGGGTTTGTTATTGTTGTTTTGCCCTTCTTTATGTCTTGTTCTGCGTATTTTTTCAAGGTCATTTTGTAAGTTGCGAATATAGAACTGCCTAAGGCCAATGAACCATATAGTCTTCATACTCATCACTGAAAAGGAAAAGGATGGTGTTCTTTGATAAAGTTCATAACCCTATAATTGATGATAACACTATGAATATGCAAACTTTATGGTTATCATCTACCAGAAACCTTAAGATCTATAGATATTCAACAGATGAGTGGGTTGTAGTCAATTAAGTGAACTGAATAATAGATTGTAGAGTTAAACATTATTGTCCTTCCCAACTCGGCCAATTTTATCTTCATTCCTTCACTTCTCTGAAATGTTTCTATACAAATGGTGACTGGGGAGGGTAAAGTTTACGATGTCCCTGTTCTATATGAAATTCAAGGATTAAAACAAAGGGAGATTTGGTTAGTGCGACTTTTCAGGTTATGATATCTATATTTACGGTAGTGTTCTACTTTGTTTACAATCCTATCATCATGCGATAGCTGTTTTTATACTTGCTCTGTCAAACATATTCAAGACCAATGTAGTCATCAATTATGTCCAAACTGCATTTATTTTTGACACATTGTATAAGCATTTCATGTTGCTTGTTAAACTTCTACTCATGACTTAAGGTTTATAGAAACTTTATGATGTGTATCTAGTGCTTGTCTCTTGATGATATATACTTGCTAATCTACAAGTTCTTCAATATGTGACAGATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCTTCAACTTATG-CTATTTGGTATTTTGAACACTAATA-TTTGTGGTTCCACTAGTTAGTCAACTTGGCATTAAACTA</genome_strand>
        <mrna_strand>AGACATGGACATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCTTCAACTTATGCCTATTTGGTATTTTGAACACTAATATTTTGTGGTTCCACTAGTTAGTCAACTTGGCATTAAACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E309277" ref_strand="+" ref_description="SGN-E309277 [cLEY-22-B13]">
      <seq>agagacatggacatgtcaaatcctgccgtctttgtcaatgctgagttcctcaaggagcatgtaggacggaaggttcgaacagtggttcaggttatgcaatctgatggtgataaagtcattggaaaatccacggatgaaaaagaattagttgtgaaaggaaatccacctaatgctctttcaacttttgttgaagtaattggtatagctgacactatccagtctattgaagcagaaatttggaccaattttggtgatacatttgatgttaatagctatgacaaggtgtgcagactagcaaatggtgacagtaagcacttgtttatctgagaaatgatttataaaagaggacatatatcctcttatttctgctgcattgttccagagtttcaatgtattataagtagtttgaagtactcctgaaaactttggattttcagcttctatttagggtttcatcaacagaagttaagctctgtgcttagatgtaaacttgtttttcttcaacttatgctatttggtattttgaacactaatattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="6900" stop="4670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6602" g_stop="6341" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6340" i_stop="5246" i_length="1095">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5245" g_stop="4970" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="538" r_length="276" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E309277" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309277" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6602" e_stop="6341"/>
          <exon e_start="5245" e_stop="4970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGACATGGACATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTGGTATGTCTTGCTTATGTTATTCATATATATACACTTGGCTTCTCCTATATCCGTTAATGCATTTGAATGTCAATTTGTACCAAATTTGTTTCACTGGCAATCAAATCCATGATTTTATTACTTGTTGTTTCTTTTGCTTCATTTACGTCTTTTTTGTCGTTTTGCTACTGTTCTTCTCCTTTATCTTTAGCATTATTTTCTCATTACTGTATTTTCTTCCATACTTGAGTTTGATATGTTATACTTGAACCGAGGGTCTATCACAAATAGTCACTCTATCTTCACAAGGTAGTAAGACTATATACACACCACCCTCCCCAAACTCCACTCGTGGAATTACACTGGGTTTGTTATTGTTGTTTTGCCCTTCTTTATGTCTTGTTCTGCGTATTTTTTCAAGGTCATTTTGTAAGTTGCGAATATAGAACTGCCTAAGGCCAATGAACCATATAGTCTTCATACTCATCACTGAAAAGGAAAAGGATGGTGTTCTTTGATAAAGTTCATAACCCTATAATTGATGATAACACTATGAATATGCAAACTTTATGGTTATCATCTACCAGAAACCTTAAGATCTATAGATATTCAACAGATGAGTGGGTTGTAGTCAATTAAGTGAACTGAATAATAGATTGTAGAGTTAAACATTATTGTCCTTCCCAACTCGGCCAATTTTATCTTCATTCCTTCACTTCTCTGAAATGTTTCTATACAAATGGTGACTGGGGAGGGTAAAGTTTACGATGTCCCTGTTCTATATGAAATTCAAGGATTAAAACAAAGGGAGATTTGGTTAGTGCGACTTTTCAGGTTATGATATCTATATTTACGGTAGTGTTCTACTTTGTTTACAATCCTATCATCATGCGATAGCTGTTTTTATACTTGCTCTGTCAAACATATTCAAGACCAATGTAGTCATCAATTATGTCCAAACTGCATTTATTTTTGACACATTGTATAAGCATTTCATGTTGCTTGTTAAACTTCTACTCATGACTTAAGGTTTATAGAAACTTTATGATGTGTATCTAGTGCTTGTCTCTTGATGATATATACTTGCTAATCTACAAGTTCTTCAATATGTGACAGATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCTTCAACTTATGCTATTTGGTATTTTGAACACTAATATTT</genome_strand>
        <mrna_strand>AGAGACATGGACATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCTTCAACTTATGCTATTTGGTATTTTGAACACTAATATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E341807" ref_strand="+" ref_description="SGN-E341807 [cTOF-9-K12]">
      <seq>cgtcaaatcctgccgtctttgtcaatgctgagttcctcaaggagcactgtaggacggaaggttcgaacagtggttcaggttatgcaatctgatggtgataaaagtcattggaaaatccacggatgaaaaagaattagttgtgaaaggaaatccacctaatgctctttcaacttttgttgaagtaattggtatagctgacactatccagtctattgaagcagaaatttggaccaattttggtgatacatttgatgttaatagctatgacaaggtgtgcagactagcaaatggtgacagtaagcacttgtttatctgagaaatgatttataaaagaggacatatatcctcttatttctgctgcattgttccagagtttcaatgtattataagtagtttgaagtactcctgaaaactttggattttcagcttctatttaggggtttcatcaaccagagttaagctctgtgcttagatgtaaacttgtttttccttcaacttatccctatttggtatttttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="6888" stop="4673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6589" g_stop="6341" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="251" r_length="251" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6340" i_stop="5246" i_length="1095">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5245" g_stop="4984" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="516" r_length="265" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="519" polyA_stop="531"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E341807" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6589" e_stop="6341"/>
          <exon e_start="5245" e_stop="4984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCA-TGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGAT-AAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTGGTATGTCTTGCTTATGTTATTCATATATATACACTTGGCTTCTCCTATATCCGTTAATGCATTTGAATGTCAATTTGTACCAAATTTGTTTCACTGGCAATCAAATCCATGATTTTATTACTTGTTGTTTCTTTTGCTTCATTTACGTCTTTTTTGTCGTTTTGCTACTGTTCTTCTCCTTTATCTTTAGCATTATTTTCTCATTACTGTATTTTCTTCCATACTTGAGTTTGATATGTTATACTTGAACCGAGGGTCTATCACAAATAGTCACTCTATCTTCACAAGGTAGTAAGACTATATACACACCACCCTCCCCAAACTCCACTCGTGGAATTACACTGGGTTTGTTATTGTTGTTTTGCCCTTCTTTATGTCTTGTTCTGCGTATTTTTTCAAGGTCATTTTGTAAGTTGCGAATATAGAACTGCCTAAGGCCAATGAACCATATAGTCTTCATACTCATCACTGAAAAGGAAAAGGATGGTGTTCTTTGATAAAGTTCATAACCCTATAATTGATGATAACACTATGAATATGCAAACTTTATGGTTATCATCTACCAGAAACCTTAAGATCTATAGATATTCAACAGATGAGTGGGTTGTAGTCAATTAAGTGAACTGAATAATAGATTGTAGAGTTAAACATTATTGTCCTTCCCAACTCGGCCAATTTTATCTTCATTCCTTCACTTCTCTGAAATGTTTCTATACAAATGGTGACTGGGGAGGGTAAAGTTTACGATGTCCCTGTTCTATATGAAATTCAAGGATTAAAACAAAGGGAGATTTGGTTAGTGCGACTTTTCAGGTTATGATATCTATATTTACGGTAGTGTTCTACTTTGTTTACAATCCTATCATCATGCGATAGCTGTTTTTATACTTGCTCTGTCAAACATATTCAAGACCAATGTAGTCATCAATTATGTCCAAACTGCATTTATTTTTGACACATTGTATAAGCATTTCATGTTGCTTGTTAAACTTCTACTCATGACTTAAGGTTTATAGAAACTTTATGATGTGTATCTAGTGCTTGTCTCTTGATGATATATACTTGCTAATCTACAAGTTCTTCAATATGTGACAGATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTA-GGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTT-CTTCAACTTAT-GCTATTTGGTATTTT</genome_strand>
        <mrna_strand>CGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCACTGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGGTTTCATCAACCAGAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCCTTCAACTTATCCCTATTTGGTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E689281" ref_strand="+" ref_description="SGN-E689281 [t3_tus_80_O02]">
      <seq>agtttgtgtgtttactggttttgattttgaacccttcagttttgttttaataatgagtttttgtttcccggtgtctacccataattttctgtgtagagatttccctgatttacatttaatagtgtatcaagttgctacacaaaattgtgataaatagatcttttcttttttttaatgatttgggttgttacactttgttcatttgtgtaattggttttgtactttctgtaattatgggtaatgaaaaatcaaggttcttggaagtgttttgcaattttttttaaaaaaaaaatccttgaaaaaaatgcagtcaatggtaaattatgattcccaaatgatatctatgtcattctttgaacaatggaatctattgaggtaatggtttgatgtaaaatatgatgttagaagttttagcgggttagaattgtttaatcttgtttagtagatgcgtactgtgcatgttcgatgatggatgtgattgtttttatataagcaactgttaatagtattgtcgtattctgattttcgatggtgtaagaaactttaactcacaggcttctgatttgttgtcttttaaagttttaattgcaagagcttgtgaaagtgtataaggtttactatttgtttactagagctcttgaaccagaagcttaatattggaaagagatggaaaggtttttaagcatttatgagttctgaatttgattttcttcattggtacagctagtcgttgaaatgcttgtagatgtgatatatcactcaaaatcctaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="7836" stop="6463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7536" g_stop="6763" g_length="774"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="774" r_length="774" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E689281" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E689281" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7536" e_stop="6763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTGTGTGTTTACTGGTTTTGATTTTGAACCCTTCAGTTTTGTTTTAATAATGAGTTTTTGTTTCCCGGTGTCTACCCATAATTTTCTGTGTAGAGATTTCCCTGATTTACATTTAATAGTGTATCAAGTTGCTACACAAAATTGTGATAAATAGATCTTTTCTTTTTTTTAATGATTTGGGTTGTTACACTTTGTTCATTTGTGTAATTGGTTTTGTACTTTCTGTAATTATGGGTAATGAAAAATCAAGGTTCTTGGAAGTGTTTTGCAATTTTTTTTAAAAAAAAAATCCTTGAAAAAAATGCAGTCAATGGTAAATTATGATTCCCAAATGATATCTATGTCATTCTTTGAACAATGGAATCTATTGAGGTAATGGTTTGATGTAAAATATGATGTTAGAAGTTTTAGCGGGTTAGAATTGTTTAATCTTGTTTAGTAGATGCGTACTGTGCATGTTCGATGATGGATGTGATTGTTTTTATATAAGCAACTGTTAATAGTATTGTCGTATTCTGATTTTCGATGGTGTAAGAAACTTTAACTCACAGGCTTCTGATTTGTTGTCTTTTAAAGTTTTAATTGCAAGAGCTTGTGAAAGTGTATAAGGTTTACTATTTGTTTACTAGAGCTCTTGAACCAGAAGCTTAATATTGGAAAGAGATGGAAAGGTTTTTAAGCATTTATGAGTTCTGAATTTGATTTTCTTCATTGGTACAGCTAGTCGTTGAAATGCTTGTAGATGTGATATATCACTCAAAATCCTAAATT</genome_strand>
        <mrna_strand>AGTTTGTGTGTTTACTGGTTTTGATTTTGAACCCTTCAGTTTTGTTTTAATAATGAGTTTTTGTTTCCCGGTGTCTACCCATAATTTTCTGTGTAGAGATTTCCCTGATTTACATTTAATAGTGTATCAAGTTGCTACACAAAATTGTGATAAATAGATCTTTTCTTTTTTTTAATGATTTGGGTTGTTACACTTTGTTCATTTGTGTAATTGGTTTTGTACTTTCTGTAATTATGGGTAATGAAAAATCAAGGTTCTTGGAAGTGTTTTGCAATTTTTTTTAAAAAAAAAATCCTTGAAAAAAATGCAGTCAATGGTAAATTATGATTCCCAAATGATATCTATGTCATTCTTTGAACAATGGAATCTATTGAGGTAATGGTTTGATGTAAAATATGATGTTAGAAGTTTTAGCGGGTTAGAATTGTTTAATCTTGTTTAGTAGATGCGTACTGTGCATGTTCGATGATGGATGTGATTGTTTTTATATAAGCAACTGTTAATAGTATTGTCGTATTCTGATTTTCGATGGTGTAAGAAACTTTAACTCACAGGCTTCTGATTTGTTGTCTTTTAAAGTTTTAATTGCAAGAGCTTGTGAAAGTGTATAAGGTTTACTATTTGTTTACTAGAGCTCTTGAACCAGAAGCTTAATATTGGAAAGAGATGGAAAGGTTTTTAAGCATTTATGAGTTCTGAATTTGATTTTCTTCATTGGTACAGCTAGTCGTTGAAATGCTTGTAGATGTGATATATCACTCAAAATCCTAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E325549" ref_strand="+" ref_description="SGN-E325549 [cTOC-15-C10]">
      <seq>gtttgtgtgtttactggttttgattttgaacccttcagttttgttttaataatgagtttttgtttcccggtgtctacccataattttctgtgtagagatttccctgatttacatttaatagtgtatcaagttgctacacaaaattgtgataaatagatcttttcttttttttaatgatttgggttgttacactttgttcatttgtgtaattggttttgtactttctgtaattatgggtaatgaaaaatcaaggttcttggaagtgttttgcaattttttttaaaaaaaaaatccttgaaaaaaatgcagtcaatggtaaattatgattcccaaatgatatctatgtcattctttgaacaatggaatctattgaggtaatggtttgatgtaaaatatgatgttagaagttttagcgggttagaattgtttaatcttgtttagtagatgcgtactgtgcatgttcgatgatggatgtgattgtttttatataagcaactgttaatagtattgtcgtattctgattttcgatggtgtaagaaactttaactcacaggcttctgattttgtgtcttttaagttttaattgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="7835" stop="6647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7535" g_stop="6947" g_length="589"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E325549" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7535" e_stop="6947"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGTGTGTTTACTGGTTTTGATTTTGAACCCTTCAGTTTTGTTTTAATAATGAGTTTTTGTTTCCCGGTGTCTACCCATAATTTTCTGTGTAGAGATTTCCCTGATTTACATTTAATAGTGTATCAAGTTGCTACACAAAATTGTGATAAATAGATCTTTTCTTTTTTTTAATGATTTGGGTTGTTACACTTTGTTCATTTGTGTAATTGGTTTTGTACTTTCTGTAATTATGGGTAATGAAAAATCAAGGTTCTTGGAAGTGTTTTGCAATTTTTTTTAAAAAAAAAATCCTTGAAAAAAATGCAGTCAATGGTAAATTATGATTCCCAAATGATATCTATGTCATTCTTTGAACAATGGAATCTATTGAGGTAATGGTTTGATGTAAAATATGATGTTAGAAGTTTTAGCGGGTTAGAATTGTTTAATCTTGTTTAGTAGATGCGTACTGTGCATGTTCGATGATGGATGTGATTGTTTTTATATAAGCAACTGTTAATAGTATTGTCGTATTCTGATTTTCGATGGTGTAAGAAACTTTAACTCACAGGCTTCTGATTTGTTGTCTTTTAAAGTTTTAATTGCA</genome_strand>
        <mrna_strand>GTTTGTGTGTTTACTGGTTTTGATTTTGAACCCTTCAGTTTTGTTTTAATAATGAGTTTTTGTTTCCCGGTGTCTACCCATAATTTTCTGTGTAGAGATTTCCCTGATTTACATTTAATAGTGTATCAAGTTGCTACACAAAATTGTGATAAATAGATCTTTTCTTTTTTTTAATGATTTGGGTTGTTACACTTTGTTCATTTGTGTAATTGGTTTTGTACTTTCTGTAATTATGGGTAATGAAAAATCAAGGTTCTTGGAAGTGTTTTGCAATTTTTTTTAAAAAAAAAATCCTTGAAAAAAATGCAGTCAATGGTAAATTATGATTCCCAAATGATATCTATGTCATTCTTTGAACAATGGAATCTATTGAGGTAATGGTTTGATGTAAAATATGATGTTAGAAGTTTTAGCGGGTTAGAATTGTTTAATCTTGTTTAGTAGATGCGTACTGTGCATGTTCGATGATGGATGTGATTGTTTTTATATAAGCAACTGTTAATAGTATTGTCGTATTCTGATTTTCGATGGTGTAAGAAACTTTAACTCACAGGCTTCTGATTTTGTGTCTTTT-AAGTTTTAATTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E597521" ref_strand="-" ref_description="SGN-E597521 [67390]">
      <seq>cttggaaacagttttaatggctgaacgagttttccttttagaggatggatacttgcaggaggttcctcactcctctcttttggacggtcaaagtggctcacttgcaccgatgagtttaacaatatgatgtttatatgaagctaaaggtctctgcttcttggaaatgaatatgcatttgttgctcatggaagtatgtcctacaactttcttacccttccaatgttagctgctcgtcgcatcaaatgcccctttatatgaagctaaaggtctgtaaggtgctgtaaattgcttgtacaagtacttacagagtgatgtatatgattgtatatctttatacaataatgtcgtttttttgcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="9071" stop="1844"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8771" g_stop="8427" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="0.910"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8426" i_stop="7595" i_length="832">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.182" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7594" g_stop="7561" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="375" r_length="33" r_score="0.676"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E597521" ref_strand="-">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E597521" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="8771" e_stop="8427"/>
          <exon e_start="7594" e_stop="7561"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGAAACAGTTTTAATGGCTGAACGAGTTTTCCTTTTAGAAGATGGATACTTGCAGGAGGTTCCTCGCGCCTCTCTTTTAGACAGTCGAAGTGGCTCACTGGCATCGATGAGTTTAACAATATGATGTTTATATGAAGCTAAAGG--TCTGCTTCTTGGAAATGAATATGCATTTGTTGCTCTAGTATGGAAGTATGTCCTACAACTTCCTTATCCTTCCCATGTAAGCTGCTCGTCGCGTCAAATGCCCCTTTATATGAAGCTAAAGGTCTGTAAAGTGTTGTAAACTGCTTGTACAAGTACTTACAGAGTGATGTATATCATTGAATATCTTTACATACGTTAGAAAATGCACCAGAGGCAACACAATAATGTTTTTTTTTTGGGCCTCGTATATTCTAGTGGTAAATGATCAATTGAATTTAAGTGTGGGGATTATAGATCAATACTTTAATTTTTACCCCCCTGTGAGACAAAAAAATCAACTTTTTTAGCATATATTTTCGCTTCATAATATAATTGAGGAATTTTTGCAAATATTCACTATAATAATCTTAATTATGTCTCATAGTTATAGTTTGCATATTTACGGGTTGTAGTAGCTATATTTTAAACTTGCTTATTTGTATAATTTGCAGGTGAATTTGTATGTTTCACGGGTATGTTTGTAAAATCGAGTTATCTTTGTAAAACTCAAAATAGTGAATTTCTCATGCAAATACAAACATCTGAACTTCTAAACATATATACAAACTATATTATACAAAAGCTATATAAATTTTGAATTATACAAACTCGAAACCTCAGCCCATATAATGATCACCGAATGTTGGTCGCGAATGATAATTATATATAATTATGATAACTAATTAACTAGCATATGTTTGTTAACCACGTAAACAAAATTTAAAGATGAACAAACCATTCAATTAGGCCCAACAATATACATTTATATGGTCCATGGGCCTGAGGGCTGCAAAGCTTAGCCCAATAAGATGAATTGCGCGGGAAGTTTTGCCGCCATTTGGAAGTAGAAAAAACTCCATTTTCACAAATTTTGATTCAAACTCTCATCACTCTCCGCAGTAAATCATCCATAGCAGAGGTTAGTTTTTTTTTTTTTTTTGTATATTCTCTGCATAATTGGTGTTAATTTGATCTTCGTGAATGAATTCAGTGTCCGATCTTCTGTTAAAAAAATATTAAGAATA</genome_strand>
        <mrna_strand>CTTGGAAACAGTTTTAATGGCTGAACGAGTTTTCCTTTTAGAGGATGGATACTTGCAGGAGGTTCCTCACTCCTCTCTTTTGGACGGTCAAAGTGGCTCACTTGCACCGATGAGTTTAACAATATGATGTTTATATGAAGCTAAAGGTCTCTGCTTCTTGGAAATGAATATGCATTTGTTGCTC----ATGGAAGTATGTCCTACAACTTTCTTACCCTTCCAATGTTAGCTGCTCGTCGCATCAAATGCCCCTTTATATGAAGCTAAAGGTCTGTAAGGTGCTGTAAATTGCTTGTACAAGTACTTACAGAGTGATGTATATGATTGTATATCTTTATACA-ATAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-CGTTTTTTTGCAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E431511" ref_strand="-" ref_description="SGN-E431511 [STM-55-H21]">
      <seq>agcaagtcagagctgttggtaagacgagctctgcagcacctgatgcaaaatcgtactgtactagtgattgctcaccgcttggaaacagttttaatggctgaacgagttttccttttagatgatggatacttgcaggaggttcctcgctcctctcttttggacggtcaaagtggctcactggcatcgatgagtttaacaatatgatgtttatatgaagctaaaggtctctgcttcttggaaatgaatatgcatttgttgctctagtatggaagtatgtcctacaactttcttatccttccaatgtaagctgctcgtcacatcaaatgcccctttatatgaagctaaaggtctgtaaggtgctgtaaatttcttgaacaagtacttacagagtgatgtatatgattgtatatctttacatacgttagaaaatgcaatagaggcaatacaataatgtcgtttttttgcctcatctgttatagtggtaaatgatcaattgatttaagtggaaaaaaaaaaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="9842" stop="8043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9542" g_stop="9486" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9485" i_stop="8792" i_length="694">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8791" g_stop="8344" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="504" r_length="447" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="507" polyA_stop="517"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E431511" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431511" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="9542" e_stop="9486"/>
          <exon e_start="8791" e_stop="8344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAGTCAGAGCTGTTGGTAAGACAAGCTCTGCAGCACCTGATGCAAAATCGTACTGTAAGTGAAAGAAGCTTCTATAGTTTTGTTTATAGTTCAGTACCATGGCTCCTCAACCTCTCCTGTCCCTCGTCATAATTATTTTTACCGAAGTTAAAATTCAGGTTCTCTCTGTTAACCATGATGTAGCATATGGAATGGAAATATATACGAATCTTACCTACCAAAAAGGAAGTACAAAAAAGCAAATGCCTATTCTGGTAAAGCGGGGTAAGTCTCACAGACACAGTAGATGAGTGATGAGGACGTAGGTTAACAGTCTCCACAAGATAGGGAACCTCGCAATACAACTGGTAGGGGGTAGTTATATGCACGTTTGGTACTGATTTACATGTTCTGTACCTTTATCATTATTGAATTATGTACCACATAGTAAAACTGTGGATACCCCTTAGACCTCACCCTGTTTGATTTCATTTTCTTCTGCATAATTTTTTTCACACGAATGAAAGAACTAAATTCTTGGCTTCTGGCAAACATTCTTACTGGGTGCTGTTGAAAACGTGCCTGAGATGTGAGAAAATCCGACTTTGTTGGCACTAGAAGTGTCTTAAGCCATCTTGATTTGAAGTTTGCTAATTGCTGACACATTTTATTGCCAAGAATATTTGACGATATCTTTCACATGCACACACACACTCACACACCTATCCTTCAGGGCAATTCTAATTATCGTCTAAATCTTTACATGCAGGTACTAGTGATTGCTCACCGCTTGGAAACAGTTTTAATGGCTGAACGAGTTTTCCTTTTAGAAGATGGATACTTGCAGGAGGTTCCTCGCGCCTCTCTTTTAGACAGTCGAAGTGGCTCACTGGCATCGATGAGTTTAACAATATGATGTTTATATGAAGCTAAAGG--TCTGCTTCTTGGAAATGAATATGCATTTGTTGCTCTAGTATGGAAGTATGTCCTACAACTTCCTTATCCTTCCCATGTAAGCTGCTCGTCGCGTCAAATGCCCCTTTATATGAAGCTAAAGGTCTGTAAAGTGTTGTAAACTGCTTGTACAAGTACTTACAGAGTGATGTATATCATTGAATATCTTTACATACGTTAGAAAATGCACCAGAGGCAACACAATAATGTTTTTTTTTTGGGCCTCGTATATTCTAGTGGTAAATGATCAATTGAATTTAAGT</genome_strand>
        <mrna_strand>AGCAAGTCAGAGCTGTTGGTAAGACGAGCTCTGCAGCACCTGATGCAAAATCGTACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGTGATTGCTCACCGCTTGGAAACAGTTTTAATGGCTGAACGAGTTTTCCTTTTAGATGATGGATACTTGCAGGAGGTTCCTCGCTCCTCTCTTTTGGACGGTCAAAGTGGCTCACTGGCATCGATGAGTTTAACAATATGATGTTTATATGAAGCTAAAGGTCTCTGCTTCTTGGAAATGAATATGCATTTGTTGCTCTAGTATGGAAGTATGTCCTACAACTTTCTTATCCTTCCAATGTAAGCTGCTCGTCACATCAAATGCCCCTTTATATGAAGCTAAAGGTCTGTAAGGTGCTGTAAATTTCTTGAACAAGTACTTACAGAGTGATGTATATGATTGTATATCTTTACATACGTTAGAAAATGCAATAGAGGCAATACAATAATGTCGTTTTTTT--GCCTCATCTGTTATAGTGGTAAATGATCAATTG-ATTTAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E464486" ref_strand="+" ref_description="SGN-E464486 [cPRO-18-K17]">
      <seq>ggcatacgaatcgagagtttaaggagaaacattggtttggtctctcaagatacaacattattttctggaagtgtcgccgagaacattggatatagggatagaatggctggtattgatatggagagagtgaagcttgctgccagaactgcaagtgcagaagaatttattgaagcgcttcctcttagctatgagacaaatgttggacctaggggctcaattttcagtggagggcagaagcaaagaatagctattgctcgggccctttatcaggatccatctattctaatattggatgaagctacttcagcattagacagcaagtcagagctgttggtaagacgagctctgcagcacctgatgcaaaatcgtactgtactagtgattgctcaccgcttggaaacagttttaatggctgaacgagttttccttttagatgatggatacttgcaggaggttcctcgctcctctcttttggacggtcaaagtggctcactggcatcgatgagtttaacaatatgatgtttatatgaagctaaaggtctctgcttcttggaaatgaatatgcatttgttgctctagtatggaagtatgtcctacaactttcttatccttccaatgtaagctgctcgtcacatcaaatgcccctttatatgaagctaaaggtctgtaaggtgctgtaaatttcttgaacaagtacttacagagtgatgtatatgattgtatatctttacatacgttagaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="12676" stop="8121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12376" g_stop="12323" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12322" i_stop="10385" i_length="1938">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.521" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10384" g_stop="10197" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="242" r_length="188" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10196" i_stop="9616" i_length="581">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.756" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9615" g_stop="9486" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="372" r_length="130" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9485" i_stop="8792" i_length="694">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8791" g_stop="8421" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="745" r_length="373" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E464486" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12376" e_stop="12323"/>
          <exon e_start="10384" e_stop="10197"/>
          <exon e_start="9615" e_stop="9486"/>
          <exon e_start="8791" e_stop="8421"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCATACGAATCAAGAGTTTAAGGAGAAACATTGGCTTGGTCTCTCAAGATACAGTAAGTCCAAACCTCTTTCCCTCTTTACAACCATGATATGATGAATTCTTTTGCCTTAATTATTTCCACATACTGCTAACCTTTATTAGTGGTTAGTTGTTGTAGTGTTCAGGACTTTTGATGCTTATGCATTTCACTTTCAAATGGCAGACAGTAGTTGTGTTAAGTTTTCTCCATTTTCTTTTGTTAATGTGTATTATATTTGTTGGAGTTGGGGGTTGGGAATGGAGACTCATTACCTGGTGATTGTTTATACTCTACTTCTTTGCGTGATCCTCTTGTTACATTCCATAGAGCGGAGTATTTCACCTCAATCTACCATGTTCTATACAATCAAAAACTTCCATGTTCTAGAGGGCTAAGCTACATGATATTTAACCAGAATCACCTGGCAGTATGGGGTAAGCAGATGATTGATATTCTCGTTGTGGATGGCAAGAATTGGAGACATAAATTATGTTAGAGCCAATAGAGGTTCAATGATTAGTTTGTTGCTAAAACTGAGGTTTTTACACTATAAGGATCTAGTTGAAGGAGAGAAATTTTAGACAAATCGTCTAAAGATTCTCCAAAGCAACAATTTCCCATGGCTTTTTGACCCAAATTTGAATTTTGTACTGCAGTGTTTCAAAATTGGGGACTGTTTCCTCTTTTTAAGTTTTAGTCCTTGATTTTGCTCTAATATTTGTTTCATTTTCTTCTTTGTATCCGAGAAACATTAAGAAAAGTTACCACATTAAGTTTAGAAAATCTTCTTAGCGAAGGGAGTGCTTCCAGGTTCTTTACCAATGGATGTTCCTCAGGAACTAATTGGGCATTGTAAGGATTACCTATGTTTCCTAATTATTTTGATCCAGTCTATTTCTTGGATATCAATTGATAGAAAGTTGAAATTCTTTCTAAGTTTGTAGATATTTGGATATGTAAATGTGTAATAGTGAAAACACTACAGTCCAACATCGGATAAAATATAAATGTGCAATATACTTTGTGAAATCTGCTTATAAATACTATGTGAAAATATTGTTAGACAATTGACATTTTTCCAGCTTATTATTATTTTTACTGTTTTTACTTATTTTAGTTTAGTGCTTCCTATTTTCTAGCTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAGTTAGTGGCGCGGTCAGTGGCCCCCTTTTATGGTAGTTAGTAGCACATGTTTTATTTAGTTTTAATGTTTATGTTTTTTCCTTGTATAAATTCCGACTTTCTGCAGATTAATATACATAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAACAAATGTTTCCTACAATCTTACTTGATTAGCTATTAAGCATCTATTTTTGAATAATGGTACCTGTCCTTCTGATTGACCTCCTTATGTTTTGAGTCTATCTCAACTAAATTTACTTCCGTTTTGGCAAAGCTCCTCATCTCGAAAAAGTTGAACTAATACTTCCTCAACTTTTTCCATGTTTGTGCTCATGCCTCATAGACTAATATATAGTAGTTCCACTTATTTTAGGAAGCTTTTAGTTTTTCAGTTTCAAAAAAATAAATGCTTCCTAAAATAAGTGGAACTACTATATATTAGTTGGACTTCAAATTTTACATTTCAATTCAAAATACCTGTTCCTGAAAGTGGGGGGACATTGCTTTTATTATCTAGAAGTTAATTGAAACATTTCATTTAATATAAGTAGATTTTCTAGCAAAGAGATAGCATCTTGTTGAACCAACTGTCCGCTTTTCACACTTGGGTTGATACGTGATACTCTGTAATAATCTGGAGCTAACTCCTACGTTGTAAACACATTCCTTAAATTCACGCTAGCAAGGTCAACTGAAGTGGGAAATAGGAACTACACAGCTGAATTGTTTTCCAATTTTTTAAAAATTCTGTCAGACATTATTTTCTGGAAGTGTTGCCGAGAACATTGGATATAGGGATAGAATGGCTGGTATTGATATGGAGAGGGTGAAGCTTGCTGCCAGAAATGCAAGTGCGGAAGAATTTATTGAAGCGCTGCCTCTTAGCTATGAGACAAATGTTGGACCTAGGGGCTCAATTTTCAGTGGAGGGCAGAAGCAAAGGTATGATACTTTTCCCACCAATACCTTTGATTTTCTGAATTTTCTTATATATTTCTCACACACAATCAATCAGTAGTATGCCTAACTTTTTTTGAAAGAAAACTTTCCCCTCTTGAGAACGTCTTCTCAAACGAAAGGAGTAACAGAATCTCACACCAAGAAAGTTGTGTCAATCCAAAAATGGTAGGAAGAGAAGTCGATCTAATATTGACTAGTCCTTGATTCTCAGATTGACTGTGGTCTTCCTCTTCAGTTGATTTTCTCAACAGATTAATGTTTTTCCAAATTCATTTTGGGTCCCCTTTTCGTGTACTTCAGCTTCTTTGTTTTCATCAATTTTAATTGGATAATTCCTGTGGATCCAGGGTGTGTTTGAATTCATTCTCTCCTTATTTCTTCACTGAATTGAGATTATTCTCTACCTTCTCAAGGGATAGATATTTTGGGAATGCTATGGAACCTATACCAATGCTCTTGTTACCTTAAGGCTTACTGCAATTGTAAACATAGGGGCTGTCATAGGCATAGCTAACCTGTTTTGATCTAGGAAATTCTCTCATTCCTTTCTATTTTCATCTCAGAATAGCTATTGCTCGGGCTCTTTATCAGGATCCATCTATTCTAATATTGGATGAAGCTACTTCAGCATTAGACAGCAAGTCAGAGCTGTTGGTAAGACAAGCTCTGCAGCACCTGATGCAAAATCGTACTGTAAGTGAAAGAAGCTTCTATAGTTTTGTTTATAGTTCAGTACCATGGCTCCTCAACCTCTCCTGTCCCTCGTCATAATTATTTTTACCGAAGTTAAAATTCAGGTTCTCTCTGTTAACCATGATGTAGCATATGGAATGGAAATATATACGAATCTTACCTACCAAAAAGGAAGTACAAAAAAGCAAATGCCTATTCTGGTAAAGCGGGGTAAGTCTCACAGACACAGTAGATGAGTGATGAGGACGTAGGTTAACAGTCTCCACAAGATAGGGAACCTCGCAATACAACTGGTAGGGGGTAGTTATATGCACGTTTGGTACTGATTTACATGTTCTGTACCTTTATCATTATTGAATTATGTACCACATAGTAAAACTGTGGATACCCCTTAGACCTCACCCTGTTTGATTTCATTTTCTTCTGCATAATTTTTTTCACACGAATGAAAGAACTAAATTCTTGGCTTCTGGCAAACATTCTTACTGGGTGCTGTTGAAAACGTGCCTGAGATGTGAGAAAATCCGACTTTGTTGGCACTAGAAGTGTCTTAAGCCATCTTGATTTGAAGTTTGCTAATTGCTGACACATTTTATTGCCAAGAATATTTGACGATATCTTTCACATGCACACACACACTCACACACCTATCCTTCAGGGCAATTCTAATTATCGTCTAAATCTTTACATGCAGGTACTAGTGATTGCTCACCGCTTGGAAACAGTTTTAATGGCTGAACGAGTTTTCCTTTTAGAAGATGGATACTTGCAGGAGGTTCCTCGCGCCTCTCTTTTAGACAGTCGAAGTGGCTCACTGGCATCGATGAGTTTAACAATATGATGTTTATATGAAGCTAAAGG--TCTGCTTCTTGGAAATGAATATGCATTTGTTGCTCTAGTATGGAAGTATGTCCTACAACTTCCTTATCCTTCCCATGTAAGCTGCTCGTCGCGTCAAATGCCCCTTTATATGAAGCTAAAGGTCTGTAAAGTGTTGTAAACTGCTTGTACAAGTACTTACAGAGTGATGTATATCATTGAATATCTTTACATACGTTAGAAAAT</genome_strand>
        <mrna_strand>GGCATACGAATCGAGAGTTTAAGGAGAAACATTGGTTTGGTCTCTCAAGATACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTATTTTCTGGAAGTGTCGCCGAGAACATTGGATATAGGGATAGAATGGCTGGTATTGATATGGAGAGAGTGAAGCTTGCTGCCAGAACTGCAAGTGCAGAAGAATTTATTGAAGCGCTTCCTCTTAGCTATGAGACAAATGTTGGACCTAGGGGCTCAATTTTCAGTGGAGGGCAGAAGCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCTATTGCTCGGGCCCTTTATCAGGATCCATCTATTCTAATATTGGATGAAGCTACTTCAGCATTAGACAGCAAGTCAGAGCTGTTGGTAAGACGAGCTCTGCAGCACCTGATGCAAAATCGTACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGTGATTGCTCACCGCTTGGAAACAGTTTTAATGGCTGAACGAGTTTTCCTTTTAGATGATGGATACTTGCAGGAGGTTCCTCGCTCCTCTCTTTTGGACGGTCAAAGTGGCTCACTGGCATCGATGAGTTTAACAATATGATGTTTATATGAAGCTAAAGGTCTCTGCTTCTTGGAAATGAATATGCATTTGTTGCTCTAGTATGGAAGTATGTCCTACAACTTTCTTATCCTTCCAATGTAAGCTGCTCGTCACATCAAATGCCCCTTTATATGAAGCTAAAGGTCTGTAAGGTGCTGTAAATTTCTTGAACAAGTACTTACAGAGTGATGTATATGATTGTATATCTTTACATACGTTAGAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E431510" ref_strand="+" ref_description="SGN-E431510 [STM-55-H21]">
      <seq>ggcatacgaatcgagagtttaaggagaaacattggtttggtctctcaagatacaacattattttctggaagtgtcgccgagaacattggatatagggatagaatggctggtattgatatggagagagtgaagcttgctgccagaactgcaagtgcagaagaatttattgaagcgcttcctcttagctatgagacaaatgttggacctaggggctcaattttcagtggagggcagaagcaaagaatagctattgctcgggccctttatcaggatccatctattctaatattggatgaagctacttcagcattagacagcaagtcagagctgttggtaagacgagctctgcagcacctgatgcaaaatcgtactgtactagtgattgctcaccgcttggaaacagttttaatggctgaacgagttttccttttagatgatggatacttgcaggaggttcctcgctcctctcttttggacggtcaaagtggctcactggcatcgatgagtttaacaatatgatgtttatatgaagctaaaggtctctgcttcttggaaatgaatatgcatttgttgctctagtatggaagtatgtcctacaactttcttatccttccnnatgtagctgctcgtcacatcaaatgcccctttatatgaagctaaaggtctgtaaggtgctgtaaatttcttgaacagtactta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="12676" stop="8166"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12376" g_stop="12323" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12322" i_stop="10385" i_length="1938">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.521" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10384" g_stop="10197" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="242" r_length="188" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10196" i_stop="9616" i_length="581">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.756" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9615" g_stop="9486" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="372" r_length="130" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9485" i_stop="8792" i_length="694">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8791" g_stop="8466" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="699" r_length="327" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E431510" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431510" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12376" e_stop="12323"/>
          <exon e_start="10384" e_stop="10197"/>
          <exon e_start="9615" e_stop="9486"/>
          <exon e_start="8791" e_stop="8466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCATACGAATCAAGAGTTTAAGGAGAAACATTGGCTTGGTCTCTCAAGATACAGTAAGTCCAAACCTCTTTCCCTCTTTACAACCATGATATGATGAATTCTTTTGCCTTAATTATTTCCACATACTGCTAACCTTTATTAGTGGTTAGTTGTTGTAGTGTTCAGGACTTTTGATGCTTATGCATTTCACTTTCAAATGGCAGACAGTAGTTGTGTTAAGTTTTCTCCATTTTCTTTTGTTAATGTGTATTATATTTGTTGGAGTTGGGGGTTGGGAATGGAGACTCATTACCTGGTGATTGTTTATACTCTACTTCTTTGCGTGATCCTCTTGTTACATTCCATAGAGCGGAGTATTTCACCTCAATCTACCATGTTCTATACAATCAAAAACTTCCATGTTCTAGAGGGCTAAGCTACATGATATTTAACCAGAATCACCTGGCAGTATGGGGTAAGCAGATGATTGATATTCTCGTTGTGGATGGCAAGAATTGGAGACATAAATTATGTTAGAGCCAATAGAGGTTCAATGATTAGTTTGTTGCTAAAACTGAGGTTTTTACACTATAAGGATCTAGTTGAAGGAGAGAAATTTTAGACAAATCGTCTAAAGATTCTCCAAAGCAACAATTTCCCATGGCTTTTTGACCCAAATTTGAATTTTGTACTGCAGTGTTTCAAAATTGGGGACTGTTTCCTCTTTTTAAGTTTTAGTCCTTGATTTTGCTCTAATATTTGTTTCATTTTCTTCTTTGTATCCGAGAAACATTAAGAAAAGTTACCACATTAAGTTTAGAAAATCTTCTTAGCGAAGGGAGTGCTTCCAGGTTCTTTACCAATGGATGTTCCTCAGGAACTAATTGGGCATTGTAAGGATTACCTATGTTTCCTAATTATTTTGATCCAGTCTATTTCTTGGATATCAATTGATAGAAAGTTGAAATTCTTTCTAAGTTTGTAGATATTTGGATATGTAAATGTGTAATAGTGAAAACACTACAGTCCAACATCGGATAAAATATAAATGTGCAATATACTTTGTGAAATCTGCTTATAAATACTATGTGAAAATATTGTTAGACAATTGACATTTTTCCAGCTTATTATTATTTTTACTGTTTTTACTTATTTTAGTTTAGTGCTTCCTATTTTCTAGCTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAGTTAGTGGCGCGGTCAGTGGCCCCCTTTTATGGTAGTTAGTAGCACATGTTTTATTTAGTTTTAATGTTTATGTTTTTTCCTTGTATAAATTCCGACTTTCTGCAGATTAATATACATAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAACAAATGTTTCCTACAATCTTACTTGATTAGCTATTAAGCATCTATTTTTGAATAATGGTACCTGTCCTTCTGATTGACCTCCTTATGTTTTGAGTCTATCTCAACTAAATTTACTTCCGTTTTGGCAAAGCTCCTCATCTCGAAAAAGTTGAACTAATACTTCCTCAACTTTTTCCATGTTTGTGCTCATGCCTCATAGACTAATATATAGTAGTTCCACTTATTTTAGGAAGCTTTTAGTTTTTCAGTTTCAAAAAAATAAATGCTTCCTAAAATAAGTGGAACTACTATATATTAGTTGGACTTCAAATTTTACATTTCAATTCAAAATACCTGTTCCTGAAAGTGGGGGGACATTGCTTTTATTATCTAGAAGTTAATTGAAACATTTCATTTAATATAAGTAGATTTTCTAGCAAAGAGATAGCATCTTGTTGAACCAACTGTCCGCTTTTCACACTTGGGTTGATACGTGATACTCTGTAATAATCTGGAGCTAACTCCTACGTTGTAAACACATTCCTTAAATTCACGCTAGCAAGGTCAACTGAAGTGGGAAATAGGAACTACACAGCTGAATTGTTTTCCAATTTTTTAAAAATTCTGTCAGACATTATTTTCTGGAAGTGTTGCCGAGAACATTGGATATAGGGATAGAATGGCTGGTATTGATATGGAGAGGGTGAAGCTTGCTGCCAGAAATGCAAGTGCGGAAGAATTTATTGAAGCGCTGCCTCTTAGCTATGAGACAAATGTTGGACCTAGGGGCTCAATTTTCAGTGGAGGGCAGAAGCAAAGGTATGATACTTTTCCCACCAATACCTTTGATTTTCTGAATTTTCTTATATATTTCTCACACACAATCAATCAGTAGTATGCCTAACTTTTTTTGAAAGAAAACTTTCCCCTCTTGAGAACGTCTTCTCAAACGAAAGGAGTAACAGAATCTCACACCAAGAAAGTTGTGTCAATCCAAAAATGGTAGGAAGAGAAGTCGATCTAATATTGACTAGTCCTTGATTCTCAGATTGACTGTGGTCTTCCTCTTCAGTTGATTTTCTCAACAGATTAATGTTTTTCCAAATTCATTTTGGGTCCCCTTTTCGTGTACTTCAGCTTCTTTGTTTTCATCAATTTTAATTGGATAATTCCTGTGGATCCAGGGTGTGTTTGAATTCATTCTCTCCTTATTTCTTCACTGAATTGAGATTATTCTCTACCTTCTCAAGGGATAGATATTTTGGGAATGCTATGGAACCTATACCAATGCTCTTGTTACCTTAAGGCTTACTGCAATTGTAAACATAGGGGCTGTCATAGGCATAGCTAACCTGTTTTGATCTAGGAAATTCTCTCATTCCTTTCTATTTTCATCTCAGAATAGCTATTGCTCGGGCTCTTTATCAGGATCCATCTATTCTAATATTGGATGAAGCTACTTCAGCATTAGACAGCAAGTCAGAGCTGTTGGTAAGACAAGCTCTGCAGCACCTGATGCAAAATCGTACTGTAAGTGAAAGAAGCTTCTATAGTTTTGTTTATAGTTCAGTACCATGGCTCCTCAACCTCTCCTGTCCCTCGTCATAATTATTTTTACCGAAGTTAAAATTCAGGTTCTCTCTGTTAACCATGATGTAGCATATGGAATGGAAATATATACGAATCTTACCTACCAAAAAGGAAGTACAAAAAAGCAAATGCCTATTCTGGTAAAGCGGGGTAAGTCTCACAGACACAGTAGATGAGTGATGAGGACGTAGGTTAACAGTCTCCACAAGATAGGGAACCTCGCAATACAACTGGTAGGGGGTAGTTATATGCACGTTTGGTACTGATTTACATGTTCTGTACCTTTATCATTATTGAATTATGTACCACATAGTAAAACTGTGGATACCCCTTAGACCTCACCCTGTTTGATTTCATTTTCTTCTGCATAATTTTTTTCACACGAATGAAAGAACTAAATTCTTGGCTTCTGGCAAACATTCTTACTGGGTGCTGTTGAAAACGTGCCTGAGATGTGAGAAAATCCGACTTTGTTGGCACTAGAAGTGTCTTAAGCCATCTTGATTTGAAGTTTGCTAATTGCTGACACATTTTATTGCCAAGAATATTTGACGATATCTTTCACATGCACACACACACTCACACACCTATCCTTCAGGGCAATTCTAATTATCGTCTAAATCTTTACATGCAGGTACTAGTGATTGCTCACCGCTTGGAAACAGTTTTAATGGCTGAACGAGTTTTCCTTTTAGAAGATGGATACTTGCAGGAGGTTCCTCGCGCCTCTCTTTTAGACAGTCGAAGTGGCTCACTGGCATCGATGAGTTTAACAATATGATGTTTATATGAAGCTAAAGG--TCTGCTTCTTGGAAATGAATATGCATTTGTTGCTCTAGTATGGAAGTATGTCCTACAACTTCCTTATCCTTCC-CATGTAAGCTGCTCGTCGCGTCAAATGCCCCTTTATATGAAGCTAAAGGTCTGTAAAGTGTTGTAAACTGCTTGTACAAGTACTTA</genome_strand>
        <mrna_strand>GGCATACGAATCGAGAGTTTAAGGAGAAACATTGGTTTGGTCTCTCAAGATACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTATTTTCTGGAAGTGTCGCCGAGAACATTGGATATAGGGATAGAATGGCTGGTATTGATATGGAGAGAGTGAAGCTTGCTGCCAGAACTGCAAGTGCAGAAGAATTTATTGAAGCGCTTCCTCTTAGCTATGAGACAAATGTTGGACCTAGGGGCTCAATTTTCAGTGGAGGGCAGAAGCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCTATTGCTCGGGCCCTTTATCAGGATCCATCTATTCTAATATTGGATGAAGCTACTTCAGCATTAGACAGCAAGTCAGAGCTGTTGGTAAGACGAGCTCTGCAGCACCTGATGCAAAATCGTACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGTGATTGCTCACCGCTTGGAAACAGTTTTAATGGCTGAACGAGTTTTCCTTTTAGATGATGGATACTTGCAGGAGGTTCCTCGCTCCTCTCTTTTGGACGGTCAAAGTGGCTCACTGGCATCGATGAGTTTAACAATATGATGTTTATATGAAGCTAAAGGTCTCTGCTTCTTGGAAATGAATATGCATTTGTTGCTCTAGTATGGAAGTATGTCCTACAACTTTCTTATCCTTCCNNATGT-AGCTGCTCGTCACATCAAATGCCCCTTTATATGAAGCTAAAGGTCTGTAAGGTGCTGTAAATTTCTTGAAC-AGTACTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E419429" ref_strand="+" ref_description="SGN-E419429 [STM-29-J1]">
      <seq>caaaatccgagtgtatggatgttaagggaccaaaaccgcaaatacctaaattaaccaccgggaaatgtccctaattcacctgaaaccgccgtatcacggccgttcgccgccccttcgccgccacaaactcacagtcccccgccaggtaaccaaaccaattactaacatcatcttcaatttctccatttccacctctgccttaacaataaaatcatcatctacacgcgccgctgcgaactccggcaagttcatttctccgttcacctctttagctcctcttaaaccttatctcctttcggaatggaaaccgattctctgtggatggctctgcagtgttttatctgtttactctctgtccaaaattgttcccaaagttggaaaattctcgtctctcatgaatgcgttggatgttgtgaggctgagagaggagtgtttggttttgggaggtttgtttttcgttcgactcgttggtaattatctgcagcaagcgtttctatgggaagctgcgttgaattgtgtgtataagatgagggtttgtgttttccataaggttttgcagagagatttanggttctttgagggagaaaatgggattgctgctggagatgttgcttataggattactgcctgagcttctgatgttgctgatactgtttattctctcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="17779" stop="16513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17479" g_stop="16813" g_length="667"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="667" r_length="667" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E419429" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17479" e_stop="16813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATTAGAGTGGATGGATGTTAAGGGACCAAAAACGTAAATACCTAAATTAATCACCGGGAAATGTCCGTAATTCACCTGAAACTGCCGTCTCACGGCCGTTCGCCGTCCCTTCGCCACCACAAACTCACAGTCCCCCGCCAGGTAACCAAACCAATCACTAACATCATCTTCAATTTCTCCATTTCCACCTCTGCCTTAAAAGTAAAATCATCATCTACACGCGCCGCTGCGAACTCCGGCAAGTTCATTTCTCCGTTCACCTCTATAGCTCCTCTTAAACCTTATCTCCTTTCGGAATGGAAATCTATTCTCTGTGGATGGCTCTGTAGTGTAATATCTGTTTACTCTCTGTCCAAAATTGTTCCCAAAGTGGGAAAATTCTCGTCTCTCATGAATCCGTTGGATGTTGTGAGGCTGAGAGAGGAGTGTTTGGTTTTGGGAGGTTTGTTTTTCGTTCGACTCGTTGGTAATTATCTGCAACAAGCGTTTCTATGGGAAGCTGCGTTGAATTGCGTGTATAAGATGAGGATTTGTGTTTTCCATAAGGTTTTGCAGAGAGATTTAGGATTTTTTGAGGGAGAAAAAGGGATTGCTGCTGGAGATGTTGCTTATAGGATTACTGCTGAAGCTTCTGATGTTGCTGATACTGTTTATTCTCTCTTG</genome_strand>
        <mrna_strand>CAAAATCCGAGTGTATGGATGTTAAGGGACCAAAACCGCAAATACCTAAATTAACCACCGGGAAATGTCCCTAATTCACCTGAAACCGCCGTATCACGGCCGTTCGCCGCCCCTTCGCCGCCACAAACTCACAGTCCCCCGCCAGGTAACCAAACCAATTACTAACATCATCTTCAATTTCTCCATTTCCACCTCTGCCTTAACAATAAAATCATCATCTACACGCGCCGCTGCGAACTCCGGCAAGTTCATTTCTCCGTTCACCTCTTTAGCTCCTCTTAAACCTTATCTCCTTTCGGAATGGAAACCGATTCTCTGTGGATGGCTCTGCAGTGTTTTATCTGTTTACTCTCTGTCCAAAATTGTTCCCAAAGTTGGAAAATTCTCGTCTCTCATGAATGCGTTGGATGTTGTGAGGCTGAGAGAGGAGTGTTTGGTTTTGGGAGGTTTGTTTTTCGTTCGACTCGTTGGTAATTATCTGCAGCAAGCGTTTCTATGGGAAGCTGCGTTGAATTGTGTGTATAAGATGAGGGTTTGTGTTTTCCATAAGGTTTTGCAGAGAGATTTANGGTTCTTTGAGGGAGAAAATGGGATTGCTGCTGGAGATGTTGCTTATAGGATTACTGCCTGAGCTTCTGATGTTGCTGATACTGTTTATTCTCTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E442080" ref_strand="+" ref_description="SGN-E442080 [cSTA-31-L22]">
      <seq>caaaatccgagtgtatggatgttaagggaccaaaaccgcaaatacctaaattaaccaccgggaaatgtccctaattcacctgaaaccgccgtatcacggccgttcgccgccccttcgccgccacaaactcacagtcccccgccaggtaaccaaaccaattactaacatcatcttcaatttctccatttccacctctgccttaacaataaaatcatcatctacacgcgccgctgcgaactccggcaagttcatttctccgttcacctctttagctcctcttaaaccttatctcctttcggaatggaaaccgattctctgtggatggctctgcagtgttttatctgtttactctctgtccaaaattgttcccaaagttggaaaattctcgtctctcatgaatccgttggatgttgtgaggctgagagaggagtgtttggttttgggaggtttgtttttcgttcgactcgttggtaattatctgcagcaagcgtttctatgggaagctgcgttgaattgtgtgtataagatgagggtttgtgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="17779" stop="16637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17479" g_stop="16937" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E442080" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17479" e_stop="16937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATTAGAGTGGATGGATGTTAAGGGACCAAAAACGTAAATACCTAAATTAATCACCGGGAAATGTCCGTAATTCACCTGAAACTGCCGTCTCACGGCCGTTCGCCGTCCCTTCGCCACCACAAACTCACAGTCCCCCGCCAGGTAACCAAACCAATCACTAACATCATCTTCAATTTCTCCATTTCCACCTCTGCCTTAAAAGTAAAATCATCATCTACACGCGCCGCTGCGAACTCCGGCAAGTTCATTTCTCCGTTCACCTCTATAGCTCCTCTTAAACCTTATCTCCTTTCGGAATGGAAATCTATTCTCTGTGGATGGCTCTGTAGTGTAATATCTGTTTACTCTCTGTCCAAAATTGTTCCCAAAGTGGGAAAATTCTCGTCTCTCATGAATCCGTTGGATGTTGTGAGGCTGAGAGAGGAGTGTTTGGTTTTGGGAGGTTTGTTTTTCGTTCGACTCGTTGGTAATTATCTGCAACAAGCGTTTCTATGGGAAGCTGCGTTGAATTGCGTGTATAAGATGAGGATTTGTGTTTT</genome_strand>
        <mrna_strand>CAAAATCCGAGTGTATGGATGTTAAGGGACCAAAACCGCAAATACCTAAATTAACCACCGGGAAATGTCCCTAATTCACCTGAAACCGCCGTATCACGGCCGTTCGCCGCCCCTTCGCCGCCACAAACTCACAGTCCCCCGCCAGGTAACCAAACCAATTACTAACATCATCTTCAATTTCTCCATTTCCACCTCTGCCTTAACAATAAAATCATCATCTACACGCGCCGCTGCGAACTCCGGCAAGTTCATTTCTCCGTTCACCTCTTTAGCTCCTCTTAAACCTTATCTCCTTTCGGAATGGAAACCGATTCTCTGTGGATGGCTCTGCAGTGTTTTATCTGTTTACTCTCTGTCCAAAATTGTTCCCAAAGTTGGAAAATTCTCGTCTCTCATGAATCCGTTGGATGTTGTGAGGCTGAGAGAGGAGTGTTTGGTTTTGGGAGGTTTGTTTTTCGTTCGACTCGTTGGTAATTATCTGCAGCAAGCGTTTCTATGGGAAGCTGCGTTGAATTGTGTGTATAAGATGAGGGTTTGTGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E443437" ref_strand="+" ref_description="SGN-E443437 [cSTA-37-L12]">
      <seq>cgaggcaaaatccgagtgtatggatgttaagggaccaaaaccgcaaataccctaaattaaccaccgggaaatgtccctaattcacctgaaaccgccgtatcacggccgttcgccgccccttcgccgccacaaactcacagtcccccgccaggtaaccaaaccaattactaacatcatcttcaatttctccatttccacctctgccttaacaataaaatcatcatctacacgcgccgctgcgaactccggcaagttcatttctccgttcacctctttagctcctcttaaaccttatctcctttcggaatggaaaccgattctctgtggatggctctgcagtgttttatctgtttactctctgtccaaaattgttcccaaagttggaaaattctcgtctctcatgaatccgttggatgttgtgaggctgagagaggagtgtttggttttgggaggtttgtttttcgttcgactcgttggtaattatctgcagcaagcgtttctatgggaagctgcgttgaattgtgtgtataagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="17779" stop="16651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17484" g_stop="16951" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="535" r_length="535" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E443437" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E443437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17484" e_stop="16951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGACCAAAATTAGAGTGGATGGATGTTAAGGGACCAAAAACGTAAATA-CCTAAATTAATCACCGGGAAATGTCCGTAATTCACCTGAAACTGCCGTCTCACGGCCGTTCGCCGTCCCTTCGCCACCACAAACTCACAGTCCCCCGCCAGGTAACCAAACCAATCACTAACATCATCTTCAATTTCTCCATTTCCACCTCTGCCTTAAAAGTAAAATCATCATCTACACGCGCCGCTGCGAACTCCGGCAAGTTCATTTCTCCGTTCACCTCTATAGCTCCTCTTAAACCTTATCTCCTTTCGGAATGGAAATCTATTCTCTGTGGATGGCTCTGTAGTGTAATATCTGTTTACTCTCTGTCCAAAATTGTTCCCAAAGTGGGAAAATTCTCGTCTCTCATGAATCCGTTGGATGTTGTGAGGCTGAGAGAGGAGTGTTTGGTTTTGGGAGGTTTGTTTTTCGTTCGACTCGTTGGTAATTATCTGCAACAAGCGTTTCTATGGGAAGCTGCGTTGAATTGCGTGTATAAGATG</genome_strand>
        <mrna_strand>CGAGGCAAAATCCGAGTGTATGGATGTTAAGGGACCAAAACCGCAAATACCCTAAATTAACCACCGGGAAATGTCCCTAATTCACCTGAAACCGCCGTATCACGGCCGTTCGCCGCCCCTTCGCCGCCACAAACTCACAGTCCCCCGCCAGGTAACCAAACCAATTACTAACATCATCTTCAATTTCTCCATTTCCACCTCTGCCTTAACAATAAAATCATCATCTACACGCGCCGCTGCGAACTCCGGCAAGTTCATTTCTCCGTTCACCTCTTTAGCTCCTCTTAAACCTTATCTCCTTTCGGAATGGAAACCGATTCTCTGTGGATGGCTCTGCAGTGTTTTATCTGTTTACTCTCTGTCCAAAATTGTTCCCAAAGTTGGAAAATTCTCGTCTCTCATGAATCCGTTGGATGTTGTGAGGCTGAGAGAGGAGTGTTTGGTTTTGGGAGGTTTGTTTTTCGTTCGACTCGTTGGTAATTATCTGCAGCAAGCGTTTCTATGGGAAGCTGCGTTGAATTGTGTGTATAAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E213783" ref_strand="+" ref_description="SGN-E213783 [cLEC-76-M5]">
      <seq>cgcaatctacttgatctaactacgtgcagacatgccaaggacttgggcattggtcttggcatggatgatggcaaaacagtgcaacacaagttcaaggtgcttgggtgttggcaaggcagcttgaacgtgcatggcttacgtgcgggctaagggcgttgacaagacaacatgttgacttgatgaagcaaggctgtgaagacttggcaagggcaaaaaaaaaagcagttcaccccaaattgctgaaataaaactaagtggggaaaaaagctaaaatattccaaatggtggaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="17342" stop="18233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17642" g_stop="17933" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E213783" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E213783" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17642" e_stop="17933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCAATCTACTTGATATAACTACGTGCAGACATGCCAAGGACTTGGGCATTGGTCTTGGCATGGATGATGGCAAAACAGTACAACACAAGTTCAAGGTGCTTGGGTGTTGGCAAGGCAGCTTGAACGTGCATGGATTACGTGCGGGCTAAAGGCGTTGGCAAGACAGCATGTTGACTTGATGAAGCAAGGCTGTGAAGACTTGGCAAGGTCAAAGACAAAGGCAGTTCACCCGAAATTGCCGAAATAAAACTAAGTGTGGAAGACAGCTAAAATATTCTAAGTGTTGGAAGC</genome_strand>
        <mrna_strand>CGCAATCTACTTGATCTAACTACGTGCAGACATGCCAAGGACTTGGGCATTGGTCTTGGCATGGATGATGGCAAAACAGTGCAACACAAGTTCAAGGTGCTTGGGTGTTGGCAAGGCAGCTTGAACGTGCATGGCTTACGTGCGGGCTAAGGGCGTTGACAAGACAACATGTTGACTTGATGAAGCAAGGCTGTGAAGACTTGGCAAGGGCAAAAAAAAAAGCAGTTCACCCCAAATTGCTGAAATAAAACTAAGTGGGGAAAAAAGCTAAAATATTCCAAATGGTGGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E207313" ref_strand="+" ref_description="SGN-E207313 [cLEC-30-L1]">
      <seq>gcaatctacttgatctaactacgtgcagacatgccaaggacttgggcattggtcttggcatggatgatggcaaaacagtgcaacacaagttcaaagtgcttgggtgttggcaaggcagcttgaacgtgcatggcttacgtgccggctaagggcgttgacaagacaacatgttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="17343" stop="18117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17643" g_stop="17817" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E207313" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>175</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17643" e_stop="17817"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAATCTACTTGATATAACTACGTGCAGACATGCCAAGGACTTGGGCATTGGTCTTGGCATGGATGATGGCAAAACAGTACAACACAAGTTCAAGGTGCTTGGGTGTTGGCAAGGCAGCTTGAACGTGCATGGATTACGTGCGGGCTAAAGGCGTTGGCAAGACAGCATGTTGAC</genome_strand>
        <mrna_strand>GCAATCTACTTGATCTAACTACGTGCAGACATGCCAAGGACTTGGGCATTGGTCTTGGCATGGATGATGGCAAAACAGTGCAACACAAGTTCAAAGTGCTTGGGTGTTGGCAAGGCAGCTTGAACGTGCATGGCTTACGTGCCGGCTAAGGGCGTTGACAAGACAACATGTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E745616" ref_strand="+" ref_description="SGN-E745616 [GI|47105254]">
      <seq>gaatgattactgattagccttttagaagatcggaaaaccctaaaaatggctgatcgagctctctgttcactctcatttgactgataaatctgcggatgcgaggtaatctcactatatatttgtaatcagtactgttttctgcttttaaatccttcaaaaaatggatgatttgatgcaaaaatcactgaaaacccccgattttttagctgtatttactaacagtacaagtgaaggaattgatagaattagctatttgccggatgatatactgcacaatatactttcatatctgtacatctttgatgttgttcagctaagcattttatcgaaaagatggaactatatatggaggacaatgccttacttgaattttgatattaatagctttggttgtgaaaggattgataggctttgggatatgggtatggctgagaaattcaaagattttatcaattgggtgttgattaaccgatgtggggatagccttgtttgttttaagctttgttgtggggatatttttggtaaaagggctatttttcgatgggttcgtgttgtgacagctcgaaatgttcaagaactcgtgttagatttttgtcctgctgagccatttgagttgccatattgtgttgtgacttgtgaatccttgcgagttttgaaattacggcttgatgggtctgtacttaagttgtctaatcattttggatttcatcagcttaaatttcttcatcttgaaaaagttgagttatcaaacgagcatttgacgagttgcttgttctcaagactagagaaactggtattggatggttgtacttttggaactatgactatgcttgatattgtttcaacgtctctggtttatgtgtctctactgaactatgtcaataacgtagaagcttacaacaattgtatcgtcaagatttcttgcccgaatctcaaggtcttgaaatatggtgctccattggcaaaggatatgatcatagagaatctcttgtctatagaagttgttcacatcttatttttttattcagacgatgtaataaaagaaattggaatgcgtttgcataaggtgttcaagaatgtcgcttctacatcagctttgaaattatgcaaaggttctgttgttggtttgtatagtgtatttcatggagtaagaaacttcccggtcacgttttataagctcaagtccttaaaattggcagtggcaattgacgaatcttgcatggaaatcatgatgctattgctcaagcattctcctaatttagaggttcttaatttgttttctgatgagaattacggttgggatgaaaactggaagttccatgatcctagtgaaagcgttttgtgcctggagtctcatctaaagttgattcagttggctggtttcaaaaatgaagataaagagatagagctactgaggtttttcctcaagaatgcacaagtattagaagaactgataattgtttgggatagctgtagtggcatatcagaagaggcaatagaggaggtttccaactttcctagagcttcttcacatgttgttgtctcatttcttaatttcaaacccaaatcaagatctcgttaccgggacaattcagtttaaaagaggttctgattgtgagacgctatgttgcttggacttggactctccaaaaatgttgtactacttttggaaggtccgacatacatttgaagtgtccaagtaacataggttagaagtaccctttttgggaactagtgcatgagcaagcacatgaagccttaacgaatttctactactgtttcgccttttcaaagagcactggacagacttcaatgaagcatatttgactccggacaaagaagcattcaacttgtcgacagatgttacatgcgtatacaagatttaggaagtatcagtcatctctttctgcactatatggttgttgttgacctctgaaacgtgttttattatgttttcggactcgcgtaggtcatgccatacacagttaaagatgcatatgaatgctttaatcatgaagaagatctggatgtccctgcaagtattgatgtttttggtgtatttcaactccaaattactcctcccaactataagctagatgtttgtgtaacttatttaggttgatgaacaacttaagtcatgtaaattacttgatctcttttgtaacttttgcatcttcatgatgtttttctcaataaaacttacttatttcatcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="21454" stop="1847"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21155" g_stop="18927" g_length="2229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2229" r_length="2229" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E745616" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>2229</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21155" e_stop="18927"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGATTACTGATTAGCCTTTTAGAAGATCGGAAAACCCTAAAAATGGCTGATCGAGCTCTCTGTTCACTCTCATTTGACTGATAAATCTGCGGATGCGAGGTAATCTCACTATATATTTGTAATCAGTACTGTTTTCTGCTTTTAAATCCTTCAAAAAATGGATGATTTGATGCAAAAATCACTGAAAACCCCCGATTTTTTAGCTGTATTTACTAACAGTACAAGTGAAGGAATTGATAGAATTAGCTATTTGCCGGATGATATACTGCACAATATACTTTCATATCTGTACATCTTTGATGTTGTTCAGCTAAGCATTTTATCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAAAGGATTGATAGGCTTTGGGATATGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTGATTAACCGATGTGGGGATAGCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAAGGGCTATTTTTCGATGGGTTCGTGTTGTGACAGCTCGAAATGTTCAAGAACTCGTGTTAGATTTTTGTCCTGCTGAGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCCTTGCGAGTTTTGAAATTACGGCTTGATGGGTCTGTACTTAAGTTGTCTAATCATTTTGGATTTCATCAGCTTAAATTTCTTCATCTTGAAAAAGTTGAGTTATCAAACGAGCATTTGACGAGTTGCTTGTTCTCAAGACTAGAGAAACTGGTATTGGATGGTTGTACTTTTGGAACTATGACTATGCTTGATATTGTTTCAACGTCTCTGGTTTATGTGTCTCTACTGAACTATGTCAATAACGTAGAAGCTTACAACAATTGTATCGTCAAGATTTCTTGCCCGAATCTCAAGGTCTTGAAATATGGTGCTCCATTGGCAAAGGATATGATCATAGAGAATCTCTTGTCTATAGAAGTTGTTCACATCTTATTTTTTTATTCAGACGATGTAATAAAAGAAATTGGAATGCGTTTGCATAAGGTGTTCAAGAATGTCGCTTCTACATCAGCTTTGAAATTATGCAAAGGTTCTGTTGTTGGTTTGTATAGTGTATTTCATGGAGTAAGAAACTTCCCGGTCACGTTTTATAAGCTCAAGTCCTTAAAATTGGCAGTGGCAATTGACGAATCTTGCATGGAAATCATGATGCTATTGCTCAAGCATTCTCCTAATTTAGAGGTTCTTAATTTGTTTTCTGATGAGAATTACGGTTGGGATGAAAACTGGAAGTTCCATGATCCTAGTGAAAGCGTTTTGTGCCTGGAGTCTCATCTAAAGTTGATTCAGTTGGCTGGTTTCAAAAATGAAGATAAAGAGATAGAGCTACTGAGGTTTTTCCTCAAGAATGCACAAGTATTAGAAGAACTGATAATTGTTTGGGATAGCTGTAGTGGCATATCAGAAGAGGCAATAGAGGAGGTTTCCAACTTTCCTAGAGCTTCTTCACATGTTGTTGTCTCATTTCTTAATTTCAAACCCAAATCAAGATCTCGTTACCGGGACAATTCAGTTTAAAAGAGGTTCTGATTGTGAGACGCTATGTTGCTTGGACTTGGACTCTCCAAAAATGTTGTACTACTTTTGGAAGGTCCGACATACATTTGAAGTGTCCAAGTAACATAGGTTAGAAGTACCCTTTTTGGGAACTAGTGCATGAGCAAGCACATGAAGCCTTAACGAATTTCTACTACTGTTTCGCCTTTTCAAAGAGCACTGGACAGACTTCAATGAAGCATATTTGACTCCGGACAAAGAAGCATTCAACTTGTCGACAGATGTTACATGCGTATACAAGATTTAGGAAGTATCAGTCATCTCTTTCTGCACTATATGGTTGTTGTTGACCTCTGAAACGTGTTTTATTATGTTTTCGGACTCGCGTAGGTCATGCCATACACAGTTAAAGATGCATATGAATGCTTTAATCATGAAGAAGATCTGGATGTCCCTGCAAGTATTGATGTTTTTGGTGTATTTCAACTCCAAATTACTCCTCCCAACTATAAGCTAGATGTTTGTGTAACTTATTTAGGTTGATGAACAACTTAAGTCATGTAAATTACTTGATCTCTTTTGTAACTTTTGCATCTTCATGATGTTTTTCTCAATAAAACTTACTTATTTCATCAAAGAGAATGGATACT</genome_strand>
        <mrna_strand>GAATGATTACTGATTAGCCTTTTAGAAGATCGGAAAACCCTAAAAATGGCTGATCGAGCTCTCTGTTCACTCTCATTTGACTGATAAATCTGCGGATGCGAGGTAATCTCACTATATATTTGTAATCAGTACTGTTTTCTGCTTTTAAATCCTTCAAAAAATGGATGATTTGATGCAAAAATCACTGAAAACCCCCGATTTTTTAGCTGTATTTACTAACAGTACAAGTGAAGGAATTGATAGAATTAGCTATTTGCCGGATGATATACTGCACAATATACTTTCATATCTGTACATCTTTGATGTTGTTCAGCTAAGCATTTTATCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAAAGGATTGATAGGCTTTGGGATATGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTGATTAACCGATGTGGGGATAGCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAAGGGCTATTTTTCGATGGGTTCGTGTTGTGACAGCTCGAAATGTTCAAGAACTCGTGTTAGATTTTTGTCCTGCTGAGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCCTTGCGAGTTTTGAAATTACGGCTTGATGGGTCTGTACTTAAGTTGTCTAATCATTTTGGATTTCATCAGCTTAAATTTCTTCATCTTGAAAAAGTTGAGTTATCAAACGAGCATTTGACGAGTTGCTTGTTCTCAAGACTAGAGAAACTGGTATTGGATGGTTGTACTTTTGGAACTATGACTATGCTTGATATTGTTTCAACGTCTCTGGTTTATGTGTCTCTACTGAACTATGTCAATAACGTAGAAGCTTACAACAATTGTATCGTCAAGATTTCTTGCCCGAATCTCAAGGTCTTGAAATATGGTGCTCCATTGGCAAAGGATATGATCATAGAGAATCTCTTGTCTATAGAAGTTGTTCACATCTTATTTTTTTATTCAGACGATGTAATAAAAGAAATTGGAATGCGTTTGCATAAGGTGTTCAAGAATGTCGCTTCTACATCAGCTTTGAAATTATGCAAAGGTTCTGTTGTTGGTTTGTATAGTGTATTTCATGGAGTAAGAAACTTCCCGGTCACGTTTTATAAGCTCAAGTCCTTAAAATTGGCAGTGGCAATTGACGAATCTTGCATGGAAATCATGATGCTATTGCTCAAGCATTCTCCTAATTTAGAGGTTCTTAATTTGTTTTCTGATGAGAATTACGGTTGGGATGAAAACTGGAAGTTCCATGATCCTAGTGAAAGCGTTTTGTGCCTGGAGTCTCATCTAAAGTTGATTCAGTTGGCTGGTTTCAAAAATGAAGATAAAGAGATAGAGCTACTGAGGTTTTTCCTCAAGAATGCACAAGTATTAGAAGAACTGATAATTGTTTGGGATAGCTGTAGTGGCATATCAGAAGAGGCAATAGAGGAGGTTTCCAACTTTCCTAGAGCTTCTTCACATGTTGTTGTCTCATTTCTTAATTTCAAACCCAAATCAAGATCTCGTTACCGGGACAATTCAGTTTAAAAGAGGTTCTGATTGTGAGACGCTATGTTGCTTGGACTTGGACTCTCCAAAAATGTTGTACTACTTTTGGAAGGTCCGACATACATTTGAAGTGTCCAAGTAACATAGGTTAGAAGTACCCTTTTTGGGAACTAGTGCATGAGCAAGCACATGAAGCCTTAACGAATTTCTACTACTGTTTCGCCTTTTCAAAGAGCACTGGACAGACTTCAATGAAGCATATTTGACTCCGGACAAAGAAGCATTCAACTTGTCGACAGATGTTACATGCGTATACAAGATTTAGGAAGTATCAGTCATCTCTTTCTGCACTATATGGTTGTTGTTGACCTCTGAAACGTGTTTTATTATGTTTTCGGACTCGCGTAGGTCATGCCATACACAGTTAAAGATGCATATGAATGCTTTAATCATGAAGAAGATCTGGATGTCCCTGCAAGTATTGATGTTTTTGGTGTATTTCAACTCCAAATTACTCCTCCCAACTATAAGCTAGATGTTTGTGTAACTTATTTAGGTTGATGAACAACTTAAGTCATGTAAATTACTTGATCTCTTTTGTAACTTTTGCATCTTCATGATGTTTTTCTCAATAAAACTTACTTATTTCATCAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E397827" ref_strand="+" ref_description="SGN-E397827 [TUS-24-L21]">
      <seq>tttttttttttttgatgaaataagtaagttttattgagaaaaacatcatgaagatgcaaaagttacaaaagagatcaagtaatttacatgacttaagttgttcatcaacctaaataagttacacaaacatctagcttatagttgggaggagtaatttggagttgaaatacaccaaaaacatcaatacttgcagggacatccaaatcttcctcacgattaaagcattcatacccctctttaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="18635" stop="19471"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18930" g_stop="19171" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E397827" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>242</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E397827" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18930" e_stop="19171"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCATTCTCTTTGATGAAATAAGTAAGTTTTATTGAGAAAAACATCATGAAGATGCAAAAGTTACAAAAGAGATCAAGTAATTTACATGACTTAAGTTGTTCATCAACCTAAATAAGTTACACAAACATCTAGCTTATAGTTGGGAGGAGTAATTTGGAGTTGAAATACACCAAAAACATCAATACTTGCAGGGACATCCAGATCTTCTTCATGATTAAAGCATTCATATGCATCTTTAAC</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTGATGAAATAAGTAAGTTTTATTGAGAAAAACATCATGAAGATGCAAAAGTTACAAAAGAGATCAAGTAATTTACATGACTTAAGTTGTTCATCAACCTAAATAAGTTACACAAACATCTAGCTTATAGTTGGGAGGAGTAATTTGGAGTTGAAATACACCAAAAACATCAATACTTGCAGGGACATCCAAATCTTCCTCACGATTAAAGCATTCATACCCCTCTTTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E244981" ref_strand="+" ref_description="SGN-E244981 [cLEF-2-J11]">
      <seq>taaaattggcagtggcaattgacgaatcttgcatggaaatcatgatgctattgctcaagcattctcctaatttagaggttcttaatttgttttctgatgagaattacggttgggatgaaaactggaagttccatgatcctagtgaaagcgttttgtgcctggagtctcatctaaagttgattcagttggctggtttcaaaaatgaagataaagagatagagctactgaggtttttcctcaagaatgcacaagtattagaagaactgataattgtttgggatagctgtagtggcatatcagaagaggcaatagaggaggtttccaactttcctagagcttcttcacatgttgttgtctcatttcttaatttcaaacccaaatcaagatctcgttaccgggacaattcagtttaaaagaggttctgattgtgagacgctatgttgcttggacttggactcttcaaaaatgttgtactacttttggaaggtccgacatacatttgaagtgtccaagtaacataggttagaagtaccctttttgggaactagtgcatgaacaagcacatgaagccttaacgaatttctactactgtttcgccttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="20268" stop="19067"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19968" g_stop="19366" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="603" r_length="603" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E244981" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244981" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19968" e_stop="19366"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATTGGCAGTGGCAATTGACGAATCTTGCATGGAAATCATGATGCTATTGCTCAAGCATTCTCCTAATTTAGAGGTTCTTAATTTGTTTTCTGATGAGAATTACGGTTGGGATGAAAACTGGAAGTTCCATGATCCTAGTGAAAGCGTTTTGTGCCTGGAGTCTCATCTAAAGTTGATTCAGTTGGCTGGTTTCAAAAATGAAGATAAAGAGATAGAGCTACTGAGGTTTTTCCTCAAGAATGCACAAGTATTAGAAGAACTGATAATTGTTTGGGATAGCTGTAGTGGCATATCAGAAGAGGCAATAGAGGAGGTTTCCAACTTTCCTAGAGCTTCTTCACATGTTGTTGTCTCATTTCTTAATTTCAAACCCAAATCAAGATCTCGTTACCGGGACAATTCAGTTTAAAAGAGGTTCTGATTGTGAGACGCTATGTTGCTTGGACTTGGACTCTCCAAAAATGTTGTACTACTTTTGGAAGGTCCGACATACATTTGAAGTGTCCAAGTAACATAGGTTAGAAGTACCCTTTTTGGGAACTAGTGCATGAGCAAGCACATGAAGCCTTAACGAATTTCTACTACTGTTTCGCCTTTTC</genome_strand>
        <mrna_strand>TAAAATTGGCAGTGGCAATTGACGAATCTTGCATGGAAATCATGATGCTATTGCTCAAGCATTCTCCTAATTTAGAGGTTCTTAATTTGTTTTCTGATGAGAATTACGGTTGGGATGAAAACTGGAAGTTCCATGATCCTAGTGAAAGCGTTTTGTGCCTGGAGTCTCATCTAAAGTTGATTCAGTTGGCTGGTTTCAAAAATGAAGATAAAGAGATAGAGCTACTGAGGTTTTTCCTCAAGAATGCACAAGTATTAGAAGAACTGATAATTGTTTGGGATAGCTGTAGTGGCATATCAGAAGAGGCAATAGAGGAGGTTTCCAACTTTCCTAGAGCTTCTTCACATGTTGTTGTCTCATTTCTTAATTTCAAACCCAAATCAAGATCTCGTTACCGGGACAATTCAGTTTAAAAGAGGTTCTGATTGTGAGACGCTATGTTGCTTGGACTTGGACTCTTCAAAAATGTTGTACTACTTTTGGAAGGTCCGACATACATTTGAAGTGTCCAAGTAACATAGGTTAGAAGTACCCTTTTTGGGAACTAGTGCATGAACAAGCACATGAAGCCTTAACGAATTTCTACTACTGTTTCGCCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E254305" ref_strand="+" ref_description="SGN-E254305 [cLEG-27-N23]">
      <seq>tggcaaaggatatgatcatagagaatctcttgtctatagaagttgttcacatcttatttttttattcagacgatgtaataaaagaaattggaatgcgtttgcataaggtgttcaagaatgtcgcttctacatcagctttgaaattatgcaaaggttctgttgttggtttgtatagtgtatttcatggagtaagaaacttcccggtcacgttttataagctcaagtccttaaaattggcagtggcaattgacgaatcttgcatggaaatcatgatgctattgctcaagcattctcctaatttagaggttcttaatttgttttctgatgagaattacggttgggatgaaaactggaagttccatgatcctagtgaaagcgttttgtgcctggagtctcatctaaagttgattcagttggctggtttcaaaaatgaagataaagagatagagctactgaggtttttcctcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="20496" stop="19427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20196" g_stop="19727" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="470" r_length="470" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E254305" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20196" e_stop="19727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAAAGGATATGATCATAGAGAATCTCTTGTCTATAGAAGTTGTTCACATCTTATTTTTTTATTCAGACGATGTAATAAAAGAAATTGGAATGCGTTTGCATAAGGTGTTCAAGAATGTCGCTTCTACATCAGCTTTGAAATTATGCAAAGGTTCTGTTGTTGGTTTGTATAGTGTATTTCATGGAGTAAGAAACTTCCCGGTCACGTTTTATAAGCTCAAGTCCTTAAAATTGGCAGTGGCAATTGACGAATCTTGCATGGAAATCATGATGCTATTGCTCAAGCATTCTCCTAATTTAGAGGTTCTTAATTTGTTTTCTGATGAGAATTACGGTTGGGATGAAAACTGGAAGTTCCATGATCCTAGTGAAAGCGTTTTGTGCCTGGAGTCTCATCTAAAGTTGATTCAGTTGGCTGGTTTCAAAAATGAAGATAAAGAGATAGAGCTACTGAGGTTTTTCCTCAAG</genome_strand>
        <mrna_strand>TGGCAAAGGATATGATCATAGAGAATCTCTTGTCTATAGAAGTTGTTCACATCTTATTTTTTTATTCAGACGATGTAATAAAAGAAATTGGAATGCGTTTGCATAAGGTGTTCAAGAATGTCGCTTCTACATCAGCTTTGAAATTATGCAAAGGTTCTGTTGTTGGTTTGTATAGTGTATTTCATGGAGTAAGAAACTTCCCGGTCACGTTTTATAAGCTCAAGTCCTTAAAATTGGCAGTGGCAATTGACGAATCTTGCATGGAAATCATGATGCTATTGCTCAAGCATTCTCCTAATTTAGAGGTTCTTAATTTGTTTTCTGATGAGAATTACGGTTGGGATGAAAACTGGAAGTTCCATGATCCTAGTGAAAGCGTTTTGTGCCTGGAGTCTCATCTAAAGTTGATTCAGTTGGCTGGTTTCAAAAATGAAGATAAAGAGATAGAGCTACTGAGGTTTTTCCTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E239931" ref_strand="+" ref_description="SGN-E239931 [cLED-29-I20]">
      <seq>gaatctcttgtctatagaagttgttcacatcttatttttttattcagacgatgtaataaaagaaattggaatgcgtttgcataaggtgttcaagaatgtcgcttctacatcagctttgaaattatgcaaaggttctgttgatggtttgtatagtgtatttcatggagtaagaaacttcccggtcacgttttataagctcaagtccttaaaattggcagtggcaattgacgaatcttgcatggaaatcatgatgctattgctcaagcattctcctaatttagaggttcttaatttgttttctgatgagaattacggttgggatgaaaactggaagttccatgatcctagtgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="20474" stop="19523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20174" g_stop="19823" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E239931" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E239931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20174" e_stop="19823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCTCTTGTCTATAGAAGTTGTTCACATCTTATTTTTTTATTCAGACGATGTAATAAAAGAAATTGGAATGCGTTTGCATAAGGTGTTCAAGAATGTCGCTTCTACATCAGCTTTGAAATTATGCAAAGGTTCTGTTGTTGGTTTGTATAGTGTATTTCATGGAGTAAGAAACTTCCCGGTCACGTTTTATAAGCTCAAGTCCTTAAAATTGGCAGTGGCAATTGACGAATCTTGCATGGAAATCATGATGCTATTGCTCAAGCATTCTCCTAATTTAGAGGTTCTTAATTTGTTTTCTGATGAGAATTACGGTTGGGATGAAAACTGGAAGTTCCATGATCCTAGTGAA</genome_strand>
        <mrna_strand>GAATCTCTTGTCTATAGAAGTTGTTCACATCTTATTTTTTTATTCAGACGATGTAATAAAAGAAATTGGAATGCGTTTGCATAAGGTGTTCAAGAATGTCGCTTCTACATCAGCTTTGAAATTATGCAAAGGTTCTGTTGATGGTTTGTATAGTGTATTTCATGGAGTAAGAAACTTCCCGGTCACGTTTTATAAGCTCAAGTCCTTAAAATTGGCAGTGGCAATTGACGAATCTTGCATGGAAATCATGATGCTATTGCTCAAGCATTCTCCTAATTTAGAGGTTCTTAATTTGTTTTCTGATGAGAATTACGGTTGGGATGAAAACTGGAAGTTCCATGATCCTAGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E434533" ref_strand="+" ref_description="SGN-E434533 [STM-60-G7]">
      <seq>gttcgactgataaatctgcggatgcaaggtaatctcactatacatttgaaatcagtactgttttctgcttttaaatccttcaaaaaatggatgatttgatgcaaaaatcattgaaaccccccaattttttagctgtatttattaacagtacaagtgaaggaatcgatagaattagctatttgccggatgatatattgcacaatatactttcatatctctacatcttcgatgttgttcagctaagcattttgtcgaaaagatggaactatatatggaggacaatgccttacttgaattttgatattaatagctttggttgtgaacggattaataggccttgggatttgggtatggctgagaaattcaaagattttatcaattgggtgtttattaaccaatgtgaggatacccttgtttgttttaagctttgttgtggggatatttttggtaaaggggctatttttcgatgggttcgtgttgtgacaactcgaaatgttcaagaacttgtgttaaatttttgtcctgctgggccatttgagttgccatattgtgttgtgacttgtgaatctttgcgagttttgaaaatacggatggatgggtctgtacttaagttgcctaatcatttcggatttcatcagcttaaatttcttcatcttgaagaagttgagttatcaaacgagcatttgacgagttgcttgttctcaagactagaaaactgaaattggattgttgtaatttctggactatgactatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="21380" stop="20027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21081" g_stop="20327" g_length="755"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="754" r_length="754" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E434533" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434533" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21081" e_stop="20327"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGACTGATAAATCTGCGGATGCGAGGTAATCTCACTATATATTTGTAATCAGTACTGTTTTCTGCTTTTAAATCCTTCAAAAAATGGATGATTTGATGCAAAAATCACTGAAAACCCCCGATTTTTTAGCTGTATTTACTAACAGTACAAGTGAAGGAATTGATAGAATTAGCTATTTGCCGGATGATATACTGCACAATATACTTTCATATCTGTACATCTTTGATGTTGTTCAGCTAAGCATTTTATCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAAAGGATTGATAGGCTTTGGGATATGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTGATTAACCGATGTGGGGATAGCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAAGGGCTATTTTTCGATGGGTTCGTGTTGTGACAGCTCGAAATGTTCAAGAACTCGTGTTAGATTTTTGTCCTGCTGAGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCCTTGCGAGTTTTGAAATTACGGCTTGATGGGTCTGTACTTAAGTTGTCTAATCATTTTGGATTTCATCAGCTTAAATTTCTTCATCTTGAAAAAGTTGAGTTATCAAACGAGCATTTGACGAGTTGCTTGTTCTCAAGACTAGAGAAACTGGTATTGGATGGTTGTACTTTTGGAACTATGACTATG</genome_strand>
        <mrna_strand>GTTCGACTGATAAATCTGCGGATGCAAGGTAATCTCACTATACATTTGAAATCAGTACTGTTTTCTGCTTTTAAATCCTTCAAAAAATGGATGATTTGATGCAAAAATCATTGAAACCCCCCAATTTTTTAGCTGTATTTATTAACAGTACAAGTGAAGGAATCGATAGAATTAGCTATTTGCCGGATGATATATTGCACAATATACTTTCATATCTCTACATCTTCGATGTTGTTCAGCTAAGCATTTTGTCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAACGGATTAATAGGCCTTGGGATTTGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTTATTAACCAATGTGAGGATACCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAGGGGCTATTTTTCGATGGGTTCGTGTTGTGACAACTCGAAATGTTCAAGAACTTGTGTTAAATTTTTGTCCTGCTGGGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCTTTGCGAGTTTTGAAAATACGGATGGATGGGTCTGTACTTAAGTTGCCTAATCATTTCGGATTTCATCAGCTTAAATTTCTTCATCTTGAAGAAGTTGAGTTATCAAACGAGCATTTGACGAGTTGCTTGTTCTCAAGACTAGA-AAACTGAAATTGGATTGTTGTAATTTCTGGACTATGACTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E391824" ref_strand="+" ref_description="SGN-E391824 [TUS-24-L21]">
      <seq>atttgccggatgatatactgcacaatatactttcatatctgtacatctttgatgttgttcagctaagcattttatcgaaaagatggaactatatatggaggacaatgccttacttgaattttgatattaatagctttggttgtgaaaggattgataggctttgggatatgggtatggctgagaaattcaaagattttatcaattgggtgttgattaaccgatgtggggatagccttgtttgttttaagctttgttgtggggatatttttggtaaaagggctatttttcgatgggttcgtgttgtgacagctcgaaatgttcaagaactcgtgttagatttttgtcctgctgagccatttgagttgccatattgtgttgtgacttgtgaatccttgcgagttttgaaattacggcttgatgggtctgtacttaagttgtctaatcattttggatttcatcagcttaaatttcttcatcatgaaaaagttgagttatcaaacgagcatttgacgagttgcttgttctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="21204" stop="20078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20904" g_stop="20378" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="527" r_length="527" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E391824" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391824" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20904" e_stop="20378"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGCCGGATGATATACTGCACAATATACTTTCATATCTGTACATCTTTGATGTTGTTCAGCTAAGCATTTTATCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAAAGGATTGATAGGCTTTGGGATATGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTGATTAACCGATGTGGGGATAGCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAAGGGCTATTTTTCGATGGGTTCGTGTTGTGACAGCTCGAAATGTTCAAGAACTCGTGTTAGATTTTTGTCCTGCTGAGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCCTTGCGAGTTTTGAAATTACGGCTTGATGGGTCTGTACTTAAGTTGTCTAATCATTTTGGATTTCATCAGCTTAAATTTCTTCATCTTGAAAAAGTTGAGTTATCAAACGAGCATTTGACGAGTTGCTTGTTCTCA</genome_strand>
        <mrna_strand>ATTTGCCGGATGATATACTGCACAATATACTTTCATATCTGTACATCTTTGATGTTGTTCAGCTAAGCATTTTATCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAAAGGATTGATAGGCTTTGGGATATGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTGATTAACCGATGTGGGGATAGCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAAGGGCTATTTTTCGATGGGTTCGTGTTGTGACAGCTCGAAATGTTCAAGAACTCGTGTTAGATTTTTGTCCTGCTGAGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCCTTGCGAGTTTTGAAATTACGGCTTGATGGGTCTGTACTTAAGTTGTCTAATCATTTTGGATTTCATCAGCTTAAATTTCTTCATCATGAAAAAGTTGAGTTATCAAACGAGCATTTGACGAGTTGCTTGTTCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E410180" ref_strand="+" ref_description="SGN-E410180 [PPI-16-C22]">
      <seq>gttcgactgataaatctgcggatgcaaggtaatctcactatacatttgaaatcagtactgttttctgcttttaaatccttcaaaaaatggatgatttgatgcaaaaatcattgaaaccccccaattttttagctgtatttattaacagtacaagtgaaggaatcgatagaattagctatttgccggatgatatattgcacaatatactttcatatctctacatcttcgatgttgttcagctaagcattttgtcgaaaagatggaactatatatggaggacaatgccttacttgaattttgatattaatagctttggttgtgaacggattaataggccttgggatttgggtatggctgagaaattcaaagattttatcaattgggtgtttattaaccaatgtgaggatacccttgtttgttttaagctttgttgtggggatatttttggtaaaggggctatttttcgatgggttcgtgttgtgacaactcgaaatgttcaagaacttgtgttaaatttttgtcctgctgggccatttgagttgccatattgtgttgtgacttgtgaatctttgcgagttttgaaaatacggatggatgggtctgtacttaagttgcctaatcatttcggatttcatcagcttaaatttcttcatctttgagaaaagtgagtatcaaacgagcatttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="21380" stop="20095"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21081" g_stop="20395" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="687" r_length="687" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E410180" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E410180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21081" e_stop="20395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGACTGATAAATCTGCGGATGCGAGGTAATCTCACTATATATTTGTAATCAGTACTGTTTTCTGCTTTTAAATCCTTCAAAAAATGGATGATTTGATGCAAAAATCACTGAAAACCCCCGATTTTTTAGCTGTATTTACTAACAGTACAAGTGAAGGAATTGATAGAATTAGCTATTTGCCGGATGATATACTGCACAATATACTTTCATATCTGTACATCTTTGATGTTGTTCAGCTAAGCATTTTATCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAAAGGATTGATAGGCTTTGGGATATGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTGATTAACCGATGTGGGGATAGCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAAGGGCTATTTTTCGATGGGTTCGTGTTGTGACAGCTCGAAATGTTCAAGAACTCGTGTTAGATTTTTGTCCTGCTGAGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCCTTGCGAGTTTTGAAATTACGGCTTGATGGGTCTGTACTTAAGTTGTCTAATCATTTTGGATTTCATCAGCTTAAATTTCTTCATC-TTGAAAAAGTTGAGTTATCAAACGAGCATTTGA</genome_strand>
        <mrna_strand>GTTCGACTGATAAATCTGCGGATGCAAGGTAATCTCACTATACATTTGAAATCAGTACTGTTTTCTGCTTTTAAATCCTTCAAAAAATGGATGATTTGATGCAAAAATCATTGAAACCCCCCAATTTTTTAGCTGTATTTATTAACAGTACAAGTGAAGGAATCGATAGAATTAGCTATTTGCCGGATGATATATTGCACAATATACTTTCATATCTCTACATCTTCGATGTTGTTCAGCTAAGCATTTTGTCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAACGGATTAATAGGCCTTGGGATTTGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTTATTAACCAATGTGAGGATACCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAGGGGCTATTTTTCGATGGGTTCGTGTTGTGACAACTCGAAATGTTCAAGAACTTGTGTTAAATTTTTGTCCTGCTGGGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCTTTGCGAGTTTTGAAAATACGGATGGATGGGTCTGTACTTAAGTTGCCTAATCATTTCGGATTTCATCAGCTTAAATTTCTTCATCTTTGAGAAAAGTGAG-TATCAAACGAGCATTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E246727" ref_strand="+" ref_description="SGN-E246727 [cLEF-45-H3]">
      <seq>ttgccggatgatatactgcacaatatactttcatatctgtacatctttgatgttgttcagctaagcattttatcgaaaagatggaactatatatggaggacaatgccttacttgaattttgatattaatagctttggttgtgaaaggattgataggctttgggatatgggtatggctgagaaattcaaagattttatcaattgggtgttgattaaccgatgtggggatagccttgtttgttttaagctttgttgtggggatatttttggtaaaagggctatttttcgatgggttcgtgttgtgacagctcgaaatgttcaagaactcgtgttagatttttgtcctgctgagccatttgagttgccatattgtgttgtgacttgtgaatccttgcgagttttgaaattacggcttgatgggtctgtacttaagttgtctaatcattttggatttcatcagcttaaatttcttcatcttgaaaaagttgagttatcaaacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="21202" stop="20104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20902" g_stop="20404" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E246727" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20902" e_stop="20404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCCGGATGATATACTGCACAATATACTTTCATATCTGTACATCTTTGATGTTGTTCAGCTAAGCATTTTATCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAAAGGATTGATAGGCTTTGGGATATGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTGATTAACCGATGTGGGGATAGCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAAGGGCTATTTTTCGATGGGTTCGTGTTGTGACAGCTCGAAATGTTCAAGAACTCGTGTTAGATTTTTGTCCTGCTGAGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCCTTGCGAGTTTTGAAATTACGGCTTGATGGGTCTGTACTTAAGTTGTCTAATCATTTTGGATTTCATCAGCTTAAATTTCTTCATCTTGAAAAAGTTGAGTTATCAAACG</genome_strand>
        <mrna_strand>TTGCCGGATGATATACTGCACAATATACTTTCATATCTGTACATCTTTGATGTTGTTCAGCTAAGCATTTTATCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAAAGGATTGATAGGCTTTGGGATATGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTGATTAACCGATGTGGGGATAGCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAAGGGCTATTTTTCGATGGGTTCGTGTTGTGACAGCTCGAAATGTTCAAGAACTCGTGTTAGATTTTTGTCCTGCTGAGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCCTTGCGAGTTTTGAAATTACGGCTTGATGGGTCTGTACTTAAGTTGTCTAATCATTTTGGATTTCATCAGCTTAAATTTCTTCATCTTGAAAAAGTTGAGTTATCAAACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E342207" ref_strand="+" ref_description="SGN-E342207 [cTOF-10-J24]">
      <seq>gggagcaaccagaattgttagcagaatctcctgctagaaggaaacgtatcgctcaagaatctgggaaaactgagcaacaggtgagtcaacttgttgctcaactttttcaaatgcgtgtacgtatgaagaatttgatgggcgttatggaaggtggttcgattcctgcactgagtaatctagaggaggcactaaaatctgaacagcaggctcctcccggtactgcaaggaggaagcgaaggtcagaaccaaggaaacaatttgcagactcgggatcagctaggcctagccctcgtggtttcggggccaagaactgaagtataagactagtatgtcaaacaaatttttgaatctttgactagctatctatgagtatcaactagaaaaaggaattgtgagcaaaaaaggaaatgatcaactagaaaagggaagttcttgacaagataatatatagtacattgtatgtactctcaactatatagttttgtccctcttcttgtgtaactattgtcttcttgatatatcttattatcttgtaatcttgaaaatttcattgtttttcccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="25431" stop="23693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25131" g_stop="25052" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.820" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24941" g_stop="24816" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="206" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24815" i_stop="24349" i_length="467">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.868" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24348" g_stop="23984" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="571" r_length="365" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E342207" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25131" e_stop="25052"/>
          <exon e_start="24941" e_stop="24816"/>
          <exon e_start="24348" e_stop="23984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAGGTAAATATCTGTGTGGAGTACTGATGCTAATATGCCATAAAACATAATTCTTTGTCGAAGAATGTTTGGTACTCCTTGCATGCACCTACATAACTTATTGCAATTCGTAGGTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAGGTGCCTATCTTGTCTAAATTTTTGGCTTAATTACTTGTTATCAAATTAGAATGTGTGGATATAGCAGTCAGTTCCAATTTTGAGCTCCTTACCTCCTTACTATGCTGTAATCATTTCTTCTTACATATTAGTCGTGGCGCGCACAAACAGGCCCCAAACACCATACTTATCGGGGAAAAAAAGAGTTCTTACATAGTGTTTCTTTTCTCTTCCAATATGCCTTCAAGATTGTAAATTCCACTTGTTCGAGGATATGCTAATACATCTGTTCGATCTAATACACATTTCTATTGTATGAGATGTAGAAACCTATTCTACTATGCATTTGTTTTTTTGACTGGACTTATACTCGAAAAGTGCATGTTTGTCATGTATTCTTAGATTTGCACTTCTGTTATCTTATCATTCATTAGCTCTAACTTAAGCTGATGGATTCGAATGGTCATCTTGTTCCCTTCTTTCTTCAGGCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGCCAAGAACTGAAGTATAAGACTAGTATGTCAAACAAATTTTTGAATCTTTGACTAGCTATCTATGAGTATCAACTAGAAAAAGGAATTGTGAGCAAAAAAGGAAATGATCAACTAGAAAAGGGAAGTTCTTGACAAGATAATATATAGTACATTGTATGTACTCTCAACTATATAGTTTTGTCCCTCTTCTTGTGTAACTATTGTCTTCTTGATATATCTTATTATCTTGTAATCTTGAAAATTTCATTGTTTTTCCCACTCCTTTAA</genome_strand>
        <mrna_strand>GGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG..............................................................................................................GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGCCAAGAACTGAAGTATAAGACTAGTATGTCAAACAAATTTTTGAATCTTTGACTAGCTATCTATGAGTATCAACTAGAAAAAGGAATTGTGAGCAAAAAAGGAAATGATCAACTAGAAAAGGGAAGTTCTTGACAAGATAATATATAGTACATTGTATGTACTCTCAACTATATAGTTTTGTCCCTCTTCTTGTGTAACTATTGTCTTCTTGATATATCTTATTATCTTGTAATCTTGAAAATTTCATTGTTTTTCCCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E745524" ref_strand="+" ref_description="SGN-E745524 [GI|47105930]">
      <seq>aatggataaagcataaaagaagaagaaaaaagcttcaatttttgcttcttcttttgattgtttgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggtggagaggtttctgaactggtttttgctaaatctaagcccaccgtaatactattggccggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaaagaagcaggttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagcccgacaaggattacaagaggccaaaaagaagaatgtagatgtagtcataatggatacagctggaagacttcagatagataaaactatgatggatgaattaaaagacgtgaaacgggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatcttgacgaagctagatggagattctaggggtggagcagctttaagtgtcaaggaggtatcaggaaagccaatcaagctcgtaggaaggggtgaacgtatggaggaccttgaacctttctatcctgaccgcatggctggacgtattttaggaatgggagatgttctatcgtttgttgagaaagcccaagaagttatgcgtcaagaagatgctgaagatttgcagaagaagatcatgagtgcaaaatttgatttcaatgacttcctgaagcaaactcgggcagttgctaggatgggtaccatgtcgcgtgttattggtatgatgcctggcatgggaaaggttactcctgcacaaattcgagaggcagagaagagcttaaagataatggagtcaatgatagatgtcatgacaccagaggagagggagcaaccagaattgttagcagaatctcctgctagaaggaaacgtatcgctcaagaatctgggaaaactgagcaacaggtgagtcaacttgttgctcaactttttcaaatgcgtgtacgtatgaagaatttgatgggcgttatggaaggtggttcgattcctgcactgagtaatctagaggaggcactaaaatctgaacagcaggctcctcccggtactgcaaggaggaagcgaaggtcagaaccaaggaaacaatttgcagactcgggatcagctaggcctagccctcgtggtttcggggccaagaactgaagtataagactagtatgtcaaacaaatttttgaatctttgactagctatctatgagtatcaactagaaaaaggaattgtgagcaaaaaaggaaatgatcaactagaaaagggaagttcttgacaagataatatatagtacattgtatgtactctcaactatatagttttgtccctcttcttgtgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31419" stop="23754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31119" g_stop="30876" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="374" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="442" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="544" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28516" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="697" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28515" i_stop="28065" i_length="451">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28064" g_stop="27939" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="823" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="27859" g_stop="27757" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="824" r_stop="926" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="26840" g_stop="26740" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="927" r_stop="1027" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="26118" g_stop="25981" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1028" r_stop="1165" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="25891" g_stop="25748" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1166" r_stop="1309" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="25482" g_stop="25407" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1310" r_stop="1385" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="25137" g_stop="25052" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1386" r_stop="1471" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.820" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="24941" g_stop="24816" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1472" r_stop="1597" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="24815" i_stop="24349" i_length="467">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.868" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="24348" g_stop="24058" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1598" r_stop="1888" r_length="291" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1890" polyA_stop="1904"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E745524" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1888</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745524" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31119" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28516"/>
          <exon e_start="28064" e_stop="27939"/>
          <exon e_start="27859" e_stop="27757"/>
          <exon e_start="26840" e_stop="26740"/>
          <exon e_start="26118" e_stop="25981"/>
          <exon e_start="25891" e_stop="25748"/>
          <exon e_start="25482" e_stop="25407"/>
          <exon e_start="25137" e_stop="25052"/>
          <exon e_start="24941" e_stop="24816"/>
          <exon e_start="24348" e_stop="24058"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGATAAAGCATAAAAGAAGAAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAGGTGGGGTCTTTTTACTACACGACACATACATTCGTTTTTTCCTTGTTCTAAGTTTAACCTTGCAGTTTACTTTGCTTCAACTTCTCTTGATTAGCAAAGTCAACATTTCTACTTTTGAACTTAGAGCAGCAAAGATGAAGGAGAGTTAATGATGGAAGTAGATGATTATAAATATCCAAAAGCTTTTCTTCCTTGAAGGGATCATGCGGCGAAACAAATACTAAAACGTAAAGAGTGATTGGACCACAAACTTCAGATTTCCTCTATGTTCAACATGTCTTTTGCGTATTATCTTGGAAGAAATTTACTTTTGTCAAGGTTTAAACTGAATGGAATAGATTTGAAGCCAATAGGCAATTGATGATATCTGTTTAAGTGGTTGTGTCAAATGTTGCCAATATGGGTCACAAGTTACAACAGAACAACAACCCAGTGTAGTCCGACATGTGTGTAATGGGGAGGGGAGGATGTAAGCAGATCTTACTCCTACCTTTTATGGGGTAGAGATTGTACACGAATCATATGTATAGACAAAAAAAATCACTGATTGCTCTTTAACGGTCAGGTTTTTGGTTAAATGAACTAAGATTGTGCATCACAATTATATGTTCACTACCACAGGTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTGTAAGTGGCAAACAAGTATTAATGCTCCTATTTTTTTTCTTTTTACTTGATTCAAGTAGTTTCATTTGACTCCTTATAAATGATTTTAGATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAGGTAAAATACCCAGTTCTTGTTAAATCTATTTCTCCTTTCCATGTCGTAATTATTGTATGGTGCAATTCATGTTTTACTAGCTATCATACATACTTTAACTTGCTACAAATGGAACGACCGATTTCAGGTCAAACAATCAAACAATGTTATCAATTCTTAAAAAAAAAAGACGATCAAACGATCAAACCTTATATTAGCTATACTCCTTTGTTTTTATATAATTGATGAAATGGGACCAAATTCCTTCTTGTTCATGCATAAACAGGTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAGGTTATATATCTTACTTCGAGGTTTCTAAGGACACGTGTTACCTAAACATGCATACTTCATCTGGTTAAATTTGTTTCTTATTTTCCTTTTTAGTCCGTTCTTTTTTTGGCAACTCTGAACTTTCCACGTAGAATGTTTAAGACTACAAGATTAAAGGACATTTTGATACATTCTACGTATCTTTAGTTGAAAACCAGAATCAAATTGAAAAGGAAGGAGTACTAGTGCTGCTAGCTCAATTCACATTTCATTTTCATCTTTTTTCTCAGAGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAGGTAAATATCTGTGTGGAGTACTGATGCTAATATGCCATAAAACATAATTCTTTGTCGAAGAATGTTTGGTACTCCTTGCATGCACCTACATAACTTATTGCAATTCGTAGGTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAGGTGCCTATCTTGTCTAAATTTTTGGCTTAATTACTTGTTATCAAATTAGAATGTGTGGATATAGCAGTCAGTTCCAATTTTGAGCTCCTTACCTCCTTACTATGCTGTAATCATTTCTTCTTACATATTAGTCGTGGCGCGCACAAACAGGCCCCAAACACCATACTTATCGGGGAAAAAAAGAGTTCTTACATAGTGTTTCTTTTCTCTTCCAATATGCCTTCAAGATTGTAAATTCCACTTGTTCGAGGATATGCTAATACATCTGTTCGATCTAATACACATTTCTATTGTATGAGATGTAGAAACCTATTCTACTATGCATTTGTTTTTTTGACTGGACTTATACTCGAAAAGTGCATGTTTGTCATGTATTCTTAGATTTGCACTTCTGTTATCTTATCATTCATTAGCTCTAACTTAAGCTGATGGATTCGAATGGTCATCTTGTTCCCTTCTTTCTTCAGGCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGCCAAGAACTGAAGTATAAGACTAGTATGTCAAACAAATTTTTGAATCTTTGACTAGCTATCTATGAGTATCAACTAGAAAAAGGAATTGTGAGCAAAAAAGGAAATGATCAACTAGAAAAGGGAAGTTCTTGACAAGATAATATATAGTACATTGTATGTACTCTCAACTATATAGTTTTGTCCCTCTTCTTGT</genome_strand>
        <mrna_strand>AATGGATAAAGCATAAAAGAAGAAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT.........................................................................................ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG.........................................................................................................................................................................................................................................................................GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG.............................................................................................................................................................................................................................................................................AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG..............................................................................................................GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGCCAAGAACTGAAGTATAAGACTAGTATGTCAAACAAATTTTTGAATCTTTGACTAGCTATCTATGAGTATCAACTAGAAAAAGGAATTGTGAGCAAAAAAGGAAATGATCAACTAGAAAAGGGAAGTTCTTGACAAGATAATATATAGTACATTGTATGTACTCTCAACTATATAGTTTTGTCCCTCTTCTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E727289" ref_strand="+" ref_description="SGN-E727289 [LA14BB02]">
      <seq>gatgaattaaaagacgtgaaacgggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatcttgacgaagctagatggagattctaggggtggagcagctttaagtgtcaaggaggtatcaggaaagccaatcaagctcgtaggaaggggtgaacgtatggaggaccttgaacctttctatcctgaccgcatggctggacgtattttaggaatgggagatgttctatcgtttgttgagaaagcccaagaagttatgcgtcaagaagatgctgaagatttgcagaagaagatcatgagtgcaaaatttgatttcaatgacttcctgaagcaaactcgggcagttgctaggatgggtaccatgtcgcgtgttattggtatgatgcctggcatgggaaaggttactcctgcacaaattcgagaggcagagaagagcttaaagataatggagtcaatgatagatgtcatgacaccagaggagagggagcaaccagaattgttagcagaatctcctgctagaaggaaacgtatcgctcaagaatctgggaaaactgagcaacaggtgagtcaacttgttgctcaactttttcaaatgcgtgtacgtatgaagaatttgatgggcgttatggaaggtggttcgattcctgcactgagtaatctagaggaggcactanaatctgaacagcaggctcctcccggtactgcaaggaggaagcgaaggtcagaaacaaggaaacaatttgcagactcgggatcagctaggcctagccctcgtggtttcggggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28141" stop="23951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27841" g_stop="27757" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26840" g_stop="26740" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="186" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26118" g_stop="25981" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="324" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25891" g_stop="25748" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="468" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25482" g_stop="25407" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="544" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25137" g_stop="25052" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="630" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.820" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="24941" g_stop="24816" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="756" r_length="126" r_score="0.992"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="24815" i_stop="24349" i_length="467">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.868" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="24348" g_stop="24251" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="757" r_stop="854" r_length="98" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E727289" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>854</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27841" e_stop="27757"/>
          <exon e_start="26840" e_stop="26740"/>
          <exon e_start="26118" e_stop="25981"/>
          <exon e_start="25891" e_stop="25748"/>
          <exon e_start="25482" e_stop="25407"/>
          <exon e_start="25137" e_stop="25052"/>
          <exon e_start="24941" e_stop="24816"/>
          <exon e_start="24348" e_stop="24251"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAGGTGGGGTCTTTTTACTACACGACACATACATTCGTTTTTTCCTTGTTCTAAGTTTAACCTTGCAGTTTACTTTGCTTCAACTTCTCTTGATTAGCAAAGTCAACATTTCTACTTTTGAACTTAGAGCAGCAAAGATGAAGGAGAGTTAATGATGGAAGTAGATGATTATAAATATCCAAAAGCTTTTCTTCCTTGAAGGGATCATGCGGCGAAACAAATACTAAAACGTAAAGAGTGATTGGACCACAAACTTCAGATTTCCTCTATGTTCAACATGTCTTTTGCGTATTATCTTGGAAGAAATTTACTTTTGTCAAGGTTTAAACTGAATGGAATAGATTTGAAGCCAATAGGCAATTGATGATATCTGTTTAAGTGGTTGTGTCAAATGTTGCCAATATGGGTCACAAGTTACAACAGAACAACAACCCAGTGTAGTCCGACATGTGTGTAATGGGGAGGGGAGGATGTAAGCAGATCTTACTCCTACCTTTTATGGGGTAGAGATTGTACACGAATCATATGTATAGACAAAAAAAATCACTGATTGCTCTTTAACGGTCAGGTTTTTGGTTAAATGAACTAAGATTGTGCATCACAATTATATGTTCACTACCACAGGTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTGTAAGTGGCAAACAAGTATTAATGCTCCTATTTTTTTTCTTTTTACTTGATTCAAGTAGTTTCATTTGACTCCTTATAAATGATTTTAGATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAGGTAAAATACCCAGTTCTTGTTAAATCTATTTCTCCTTTCCATGTCGTAATTATTGTATGGTGCAATTCATGTTTTACTAGCTATCATACATACTTTAACTTGCTACAAATGGAACGACCGATTTCAGGTCAAACAATCAAACAATGTTATCAATTCTTAAAAAAAAAAGACGATCAAACGATCAAACCTTATATTAGCTATACTCCTTTGTTTTTATATAATTGATGAAATGGGACCAAATTCCTTCTTGTTCATGCATAAACAGGTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAGGTTATATATCTTACTTCGAGGTTTCTAAGGACACGTGTTACCTAAACATGCATACTTCATCTGGTTAAATTTGTTTCTTATTTTCCTTTTTAGTCCGTTCTTTTTTTGGCAACTCTGAACTTTCCACGTAGAATGTTTAAGACTACAAGATTAAAGGACATTTTGATACATTCTACGTATCTTTAGTTGAAAACCAGAATCAAATTGAAAAGGAAGGAGTACTAGTGCTGCTAGCTCAATTCACATTTCATTTTCATCTTTTTTCTCAGAGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAGGTAAATATCTGTGTGGAGTACTGATGCTAATATGCCATAAAACATAATTCTTTGTCGAAGAATGTTTGGTACTCCTTGCATGCACCTACATAACTTATTGCAATTCGTAGGTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAGGTGCCTATCTTGTCTAAATTTTTGGCTTAATTACTTGTTATCAAATTAGAATGTGTGGATATAGCAGTCAGTTCCAATTTTGAGCTCCTTACCTCCTTACTATGCTGTAATCATTTCTTCTTACATATTAGTCGTGGCGCGCACAAACAGGCCCCAAACACCATACTTATCGGGGAAAAAAAGAGTTCTTACATAGTGTTTCTTTTCTCTTCCAATATGCCTTCAAGATTGTAAATTCCACTTGTTCGAGGATATGCTAATACATCTGTTCGATCTAATACACATTTCTATTGTATGAGATGTAGAAACCTATTCTACTATGCATTTGTTTTTTTGACTGGACTTATACTCGAAAAGTGCATGTTTGTCATGTATTCTTAGATTTGCACTTCTGTTATCTTATCATTCATTAGCTCTAACTTAAGCTGATGGATTCGAATGGTCATCTTGTTCCCTTCTTTCTTCAGGCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGC</genome_strand>
        <mrna_strand>GATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT.........................................................................................ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG.........................................................................................................................................................................................................................................................................GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG.............................................................................................................................................................................................................................................................................AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG..............................................................................................................GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTANAATCTGAACAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAAACAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E700344" ref_strand="+" ref_description="SGN-E700344 [FA12DD10]">
      <seq>gggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatcttgacgaagctagatggagattctaggggtggagcagctttaagtgtcaaggaggtatcaggaaagccaatcaagctcgtaggaaggggtgaacgtatggaggaccttgaacctttctatcctgaccgcatggctggacgtattttaggaatgggagatgttctatcgtttgttgagaaagcccaagaagttatgcgtcaagaagatgctgaagatttgcagaagaagatcatgagtgcaaaatttgatttcaatgacttcctgaagcaaactcgggcagttgctaggatgggtaccatgtcgcgtgttattggtatgatgcctggcatgggaaaggttactcctgcacaaattcgagaggcagagaagagcttaaagataatggagtcaatgatagatgtcatgacaccagaggagagggagcaaccagaattgttagcagaatctcctgctagaaggaaacgtatcgctcaagaatctgggaaaactgagcaacaggtgagtcaacttgttgctcaactttttcaaatgcgtgtacgtatgaagaatttgatgggcgttatggaaggtggttcgattcctgcactgagtaatctagaggaggcactaaaatctgaacagcaggctcctcccggtactgcaaggaggaagcgaaggtcagaaccaaggaaacaatttgcagactcgggatcagctaggcctagccctcgtggtttcggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28119" stop="23953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27819" g_stop="27757" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26840" g_stop="26740" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="164" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26118" g_stop="25981" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="302" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25891" g_stop="25748" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="446" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25482" g_stop="25407" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="522" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25137" g_stop="25052" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="608" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.820" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="24941" g_stop="24816" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="734" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="24815" i_stop="24349" i_length="467">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.868" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="24348" g_stop="24253" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="735" r_stop="830" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E700344" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>830</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700344" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27819" e_stop="27757"/>
          <exon e_start="26840" e_stop="26740"/>
          <exon e_start="26118" e_stop="25981"/>
          <exon e_start="25891" e_stop="25748"/>
          <exon e_start="25482" e_stop="25407"/>
          <exon e_start="25137" e_stop="25052"/>
          <exon e_start="24941" e_stop="24816"/>
          <exon e_start="24348" e_stop="24253"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAGGTGGGGTCTTTTTACTACACGACACATACATTCGTTTTTTCCTTGTTCTAAGTTTAACCTTGCAGTTTACTTTGCTTCAACTTCTCTTGATTAGCAAAGTCAACATTTCTACTTTTGAACTTAGAGCAGCAAAGATGAAGGAGAGTTAATGATGGAAGTAGATGATTATAAATATCCAAAAGCTTTTCTTCCTTGAAGGGATCATGCGGCGAAACAAATACTAAAACGTAAAGAGTGATTGGACCACAAACTTCAGATTTCCTCTATGTTCAACATGTCTTTTGCGTATTATCTTGGAAGAAATTTACTTTTGTCAAGGTTTAAACTGAATGGAATAGATTTGAAGCCAATAGGCAATTGATGATATCTGTTTAAGTGGTTGTGTCAAATGTTGCCAATATGGGTCACAAGTTACAACAGAACAACAACCCAGTGTAGTCCGACATGTGTGTAATGGGGAGGGGAGGATGTAAGCAGATCTTACTCCTACCTTTTATGGGGTAGAGATTGTACACGAATCATATGTATAGACAAAAAAAATCACTGATTGCTCTTTAACGGTCAGGTTTTTGGTTAAATGAACTAAGATTGTGCATCACAATTATATGTTCACTACCACAGGTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTGTAAGTGGCAAACAAGTATTAATGCTCCTATTTTTTTTCTTTTTACTTGATTCAAGTAGTTTCATTTGACTCCTTATAAATGATTTTAGATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAGGTAAAATACCCAGTTCTTGTTAAATCTATTTCTCCTTTCCATGTCGTAATTATTGTATGGTGCAATTCATGTTTTACTAGCTATCATACATACTTTAACTTGCTACAAATGGAACGACCGATTTCAGGTCAAACAATCAAACAATGTTATCAATTCTTAAAAAAAAAAGACGATCAAACGATCAAACCTTATATTAGCTATACTCCTTTGTTTTTATATAATTGATGAAATGGGACCAAATTCCTTCTTGTTCATGCATAAACAGGTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAGGTTATATATCTTACTTCGAGGTTTCTAAGGACACGTGTTACCTAAACATGCATACTTCATCTGGTTAAATTTGTTTCTTATTTTCCTTTTTAGTCCGTTCTTTTTTTGGCAACTCTGAACTTTCCACGTAGAATGTTTAAGACTACAAGATTAAAGGACATTTTGATACATTCTACGTATCTTTAGTTGAAAACCAGAATCAAATTGAAAAGGAAGGAGTACTAGTGCTGCTAGCTCAATTCACATTTCATTTTCATCTTTTTTCTCAGAGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAGGTAAATATCTGTGTGGAGTACTGATGCTAATATGCCATAAAACATAATTCTTTGTCGAAGAATGTTTGGTACTCCTTGCATGCACCTACATAACTTATTGCAATTCGTAGGTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAGGTGCCTATCTTGTCTAAATTTTTGGCTTAATTACTTGTTATCAAATTAGAATGTGTGGATATAGCAGTCAGTTCCAATTTTGAGCTCCTTACCTCCTTACTATGCTGTAATCATTTCTTCTTACATATTAGTCGTGGCGCGCACAAACAGGCCCCAAACACCATACTTATCGGGGAAAAAAAGAGTTCTTACATAGTGTTTCTTTTCTCTTCCAATATGCCTTCAAGATTGTAAATTCCACTTGTTCGAGGATATGCTAATACATCTGTTCGATCTAATACACATTTCTATTGTATGAGATGTAGAAACCTATTCTACTATGCATTTGTTTTTTTGACTGGACTTATACTCGAAAAGTGCATGTTTGTCATGTATTCTTAGATTTGCACTTCTGTTATCTTATCATTCATTAGCTCTAACTTAAGCTGATGGATTCGAATGGTCATCTTGTTCCCTTCTTTCTTCAGGCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGG</genome_strand>
        <mrna_strand>GGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT.........................................................................................ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG.........................................................................................................................................................................................................................................................................GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG.............................................................................................................................................................................................................................................................................AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG..............................................................................................................GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E265643" ref_strand="+" ref_description="SGN-E265643 [cLEI-14-L19]">
      <seq>tatcctgaccgcatggctggacgtattttaggaatgggagatgttctatcgtttgttgagaaagcccaagaagttatgcgtcaagaagatgctgaagatttgcagaagaagatcatgagtgcaaaatttgatttcaatgacttcctgaagcaaactcgggcagttgctaggatgggtaccatgtcgcgtgttattggtatgatgcctggcatgggaaaggttactcctgcacaaattcgagaggcagagaagagcttaaagataatggagtcaatgatagatgtcatgacaccagaggagagggagcaaccagaattgttagcagaatctcctgctagaaggaaacgtatcgctcaagaatctgggaaaactgagcaacaggtgagtcaacttgttgctcaactttttcaaatgcgtgtacgtatgaagaatttgatgggcgttatggaaggtggttcgattcctgcactgagtaatctagaggaggcactaaaatctgaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="26355" stop="24520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26055" g_stop="25981" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25891" g_stop="25748" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="219" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25482" g_stop="25407" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="295" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25137" g_stop="25052" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="381" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.820" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="24941" g_stop="24820" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="503" r_length="122" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E265643" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265643" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26055" e_stop="25981"/>
          <exon e_start="25891" e_stop="25748"/>
          <exon e_start="25482" e_stop="25407"/>
          <exon e_start="25137" e_stop="25052"/>
          <exon e_start="24941" e_stop="24820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTGTAAGTGGCAAACAAGTATTAATGCTCCTATTTTTTTTCTTTTTACTTGATTCAAGTAGTTTCATTTGACTCCTTATAAATGATTTTAGATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAGGTAAAATACCCAGTTCTTGTTAAATCTATTTCTCCTTTCCATGTCGTAATTATTGTATGGTGCAATTCATGTTTTACTAGCTATCATACATACTTTAACTTGCTACAAATGGAACGACCGATTTCAGGTCAAACAATCAAACAATGTTATCAATTCTTAAAAAAAAAAGACGATCAAACGATCAAACCTTATATTAGCTATACTCCTTTGTTTTTATATAATTGATGAAATGGGACCAAATTCCTTCTTGTTCATGCATAAACAGGTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAGGTTATATATCTTACTTCGAGGTTTCTAAGGACACGTGTTACCTAAACATGCATACTTCATCTGGTTAAATTTGTTTCTTATTTTCCTTTTTAGTCCGTTCTTTTTTTGGCAACTCTGAACTTTCCACGTAGAATGTTTAAGACTACAAGATTAAAGGACATTTTGATACATTCTACGTATCTTTAGTTGAAAACCAGAATCAAATTGAAAAGGAAGGAGTACTAGTGCTGCTAGCTCAATTCACATTTCATTTTCATCTTTTTTCTCAGAGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAGGTAAATATCTGTGTGGAGTACTGATGCTAATATGCCATAAAACATAATTCTTTGTCGAAGAATGTTTGGTACTCCTTGCATGCACCTACATAACTTATTGCAATTCGTAGGTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACA</genome_strand>
        <mrna_strand>TATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT.........................................................................................ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG.........................................................................................................................................................................................................................................................................GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG.............................................................................................................................................................................................................................................................................AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG..............................................................................................................GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E318865" ref_strand="+" ref_description="SGN-E318865 [cTOB-11-E23]">
      <seq>ttaggaatgggagatgttctatcgtttgttgagaaagcccaagaagttatgcgtcaagaagatgctgaagatttgcagaagaagatcatgagtgcaaaatttgatttcaatgacttcctgaagcaaactcgggcagttgctaggatgggtaccatgtcgcgtgttattggtatgatgcctggcatgggaaaggttactcctgcacaaattcgagaggcagagaagagcttaaagataatggagtcaatgatagatgtcatgacaccagaggagagggagcaaccagaattgttagcagaatctcctgctagaaggaaacgtatcgctcaagaatctgggaaaactgagcaacaggtgagtcaacttgttgctcaactttttcaaatgcgtgtacgtatgaagaatttgatgggcgttatggaaggtggttcgattcctgcactgagtaatctagaggaggcactaaaatctgaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="26328" stop="24520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26028" g_stop="25981" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25891" g_stop="25748" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="192" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25482" g_stop="25407" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="268" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25137" g_stop="25052" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="354" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.820" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="24941" g_stop="24820" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="476" r_length="122" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E318865" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318865" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26028" e_stop="25981"/>
          <exon e_start="25891" e_stop="25748"/>
          <exon e_start="25482" e_stop="25407"/>
          <exon e_start="25137" e_stop="25052"/>
          <exon e_start="24941" e_stop="24820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTGTAAGTGGCAAACAAGTATTAATGCTCCTATTTTTTTTCTTTTTACTTGATTCAAGTAGTTTCATTTGACTCCTTATAAATGATTTTAGATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAGGTAAAATACCCAGTTCTTGTTAAATCTATTTCTCCTTTCCATGTCGTAATTATTGTATGGTGCAATTCATGTTTTACTAGCTATCATACATACTTTAACTTGCTACAAATGGAACGACCGATTTCAGGTCAAACAATCAAACAATGTTATCAATTCTTAAAAAAAAAAGACGATCAAACGATCAAACCTTATATTAGCTATACTCCTTTGTTTTTATATAATTGATGAAATGGGACCAAATTCCTTCTTGTTCATGCATAAACAGGTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAGGTTATATATCTTACTTCGAGGTTTCTAAGGACACGTGTTACCTAAACATGCATACTTCATCTGGTTAAATTTGTTTCTTATTTTCCTTTTTAGTCCGTTCTTTTTTTGGCAACTCTGAACTTTCCACGTAGAATGTTTAAGACTACAAGATTAAAGGACATTTTGATACATTCTACGTATCTTTAGTTGAAAACCAGAATCAAATTGAAAAGGAAGGAGTACTAGTGCTGCTAGCTCAATTCACATTTCATTTTCATCTTTTTTCTCAGAGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAGGTAAATATCTGTGTGGAGTACTGATGCTAATATGCCATAAAACATAATTCTTTGTCGAAGAATGTTTGGTACTCCTTGCATGCACCTACATAACTTATTGCAATTCGTAGGTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACA</genome_strand>
        <mrna_strand>TTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT.........................................................................................ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG.........................................................................................................................................................................................................................................................................GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG.............................................................................................................................................................................................................................................................................AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG..............................................................................................................GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E729389" ref_strand="+" ref_description="SGN-E729389 [LA20DF07]">
      <seq>gaaacgggtactgaaccccacanaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatcttgacgaagctagatggagattctaggggtggagcagctttaagtgtcaaggaggtatcaggaaagccaatcaagctcgtaggaaggggtgaacgtatggaggaccttgaacctttctatcctgaccgcatggctggacgtattttaggaatgggagatgttctatcgtttgttgagaaagcccaagaagttatgcgtcaagaagatgctgaagatttgcagaagaagatcatgagtgcaaaatttgatttcaatgacttcctgaagcaaactcgggcagttgctaggatgggtaccatgtcgcgtgttattggtatgatgcctggcatgggaaaggttactcctgcacaaattcgagaggcagagaagagcttaaagataatggagtcaatgatagatgtcatgacaccagaggagagggagcaaccagaattgttagcagaatctcctgctagaaggaaacgtatcgctcaagaatctgggaaaactgagcaacaggtgagtcaacttgttgctcaactttttcaaatgcgtgtacgtatgaagaatttgatgggcgttatgggaggtggttcgattcctgcactgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28124" stop="24550"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27824" g_stop="27757" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="0.98"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26840" g_stop="26740" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="169" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26118" g_stop="25981" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="307" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25891" g_stop="25748" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="451" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25482" g_stop="25407" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="527" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25137" g_stop="25052" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="613" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.820" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="24941" g_stop="24850" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="614" r_stop="705" r_length="92" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E729389" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729389" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27824" e_stop="27757"/>
          <exon e_start="26840" e_stop="26740"/>
          <exon e_start="26118" e_stop="25981"/>
          <exon e_start="25891" e_stop="25748"/>
          <exon e_start="25482" e_stop="25407"/>
          <exon e_start="25137" e_stop="25052"/>
          <exon e_start="24941" e_stop="24850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAGGTGGGGTCTTTTTACTACACGACACATACATTCGTTTTTTCCTTGTTCTAAGTTTAACCTTGCAGTTTACTTTGCTTCAACTTCTCTTGATTAGCAAAGTCAACATTTCTACTTTTGAACTTAGAGCAGCAAAGATGAAGGAGAGTTAATGATGGAAGTAGATGATTATAAATATCCAAAAGCTTTTCTTCCTTGAAGGGATCATGCGGCGAAACAAATACTAAAACGTAAAGAGTGATTGGACCACAAACTTCAGATTTCCTCTATGTTCAACATGTCTTTTGCGTATTATCTTGGAAGAAATTTACTTTTGTCAAGGTTTAAACTGAATGGAATAGATTTGAAGCCAATAGGCAATTGATGATATCTGTTTAAGTGGTTGTGTCAAATGTTGCCAATATGGGTCACAAGTTACAACAGAACAACAACCCAGTGTAGTCCGACATGTGTGTAATGGGGAGGGGAGGATGTAAGCAGATCTTACTCCTACCTTTTATGGGGTAGAGATTGTACACGAATCATATGTATAGACAAAAAAAATCACTGATTGCTCTTTAACGGTCAGGTTTTTGGTTAAATGAACTAAGATTGTGCATCACAATTATATGTTCACTACCACAGGTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTGTAAGTGGCAAACAAGTATTAATGCTCCTATTTTTTTTCTTTTTACTTGATTCAAGTAGTTTCATTTGACTCCTTATAAATGATTTTAGATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAGGTAAAATACCCAGTTCTTGTTAAATCTATTTCTCCTTTCCATGTCGTAATTATTGTATGGTGCAATTCATGTTTTACTAGCTATCATACATACTTTAACTTGCTACAAATGGAACGACCGATTTCAGGTCAAACAATCAAACAATGTTATCAATTCTTAAAAAAAAAAGACGATCAAACGATCAAACCTTATATTAGCTATACTCCTTTGTTTTTATATAATTGATGAAATGGGACCAAATTCCTTCTTGTTCATGCATAAACAGGTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAGGTTATATATCTTACTTCGAGGTTTCTAAGGACACGTGTTACCTAAACATGCATACTTCATCTGGTTAAATTTGTTTCTTATTTTCCTTTTTAGTCCGTTCTTTTTTTGGCAACTCTGAACTTTCCACGTAGAATGTTTAAGACTACAAGATTAAAGGACATTTTGATACATTCTACGTATCTTTAGTTGAAAACCAGAATCAAATTGAAAAGGAAGGAGTACTAGTGCTGCTAGCTCAATTCACATTTCATTTTCATCTTTTTTCTCAGAGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAGGTAAATATCTGTGTGGAGTACTGATGCTAATATGCCATAAAACATAATTCTTTGTCGAAGAATGTTTGGTACTCCTTGCATGCACCTACATAACTTATTGCAATTCGTAGGTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAG</genome_strand>
        <mrna_strand>GAAACGGGTACTGAACCCCACANAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT.........................................................................................ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG.........................................................................................................................................................................................................................................................................GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG.............................................................................................................................................................................................................................................................................AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG..............................................................................................................GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGGAGGTGGTTCGATTCCTGCACTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E726172" ref_strand="+" ref_description="SGN-E726172 [LA11AB07]">
      <seq>gtagatgtagtcataatggatacagctggaagacttcagatagataaaactatgatggatgaattaaaagacgtgaaacgggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatcttgacgaagctagatggagattctaggggtggagcagctttaagtgtcaaggaggtatcaggaaagccaatcaagctcgtaggaaggggtgaacgtatggaggaccttgaacctttctatcctgaccgcatggctggacgtattttaggaatgggagatgttctatcgtttgttgagaaagcccaagaagttatgcgtcaagaagatgctgaagatttgcagaagaagatcatgagtgcaaaatttgatttcaatgacttcctgaagcaaactcgggcagttgctaggatgggtaccatgtcgcgtgttattggtatgatgcctggcatgggaaaggttactcctgcacaaattcgagaggcagagaagagcttaaagataatggagtcaatgatagatgtcatgacaccagaggagagggagcaaccagaattgttagcagaatctcctgctagaaggaaacgtatcgctcaagaatctgggaaaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28277" stop="24760"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27977" g_stop="27939" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27859" g_stop="27757" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="142" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26840" g_stop="26740" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="243" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26118" g_stop="25981" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="381" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25891" g_stop="25748" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="525" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25482" g_stop="25407" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="601" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="25137" g_stop="25060" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="679" r_length="78" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E726172" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E726172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27977" e_stop="27939"/>
          <exon e_start="27859" e_stop="27757"/>
          <exon e_start="26840" e_stop="26740"/>
          <exon e_start="26118" e_stop="25981"/>
          <exon e_start="25891" e_stop="25748"/>
          <exon e_start="25482" e_stop="25407"/>
          <exon e_start="25137" e_stop="25060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAGGTGGGGTCTTTTTACTACACGACACATACATTCGTTTTTTCCTTGTTCTAAGTTTAACCTTGCAGTTTACTTTGCTTCAACTTCTCTTGATTAGCAAAGTCAACATTTCTACTTTTGAACTTAGAGCAGCAAAGATGAAGGAGAGTTAATGATGGAAGTAGATGATTATAAATATCCAAAAGCTTTTCTTCCTTGAAGGGATCATGCGGCGAAACAAATACTAAAACGTAAAGAGTGATTGGACCACAAACTTCAGATTTCCTCTATGTTCAACATGTCTTTTGCGTATTATCTTGGAAGAAATTTACTTTTGTCAAGGTTTAAACTGAATGGAATAGATTTGAAGCCAATAGGCAATTGATGATATCTGTTTAAGTGGTTGTGTCAAATGTTGCCAATATGGGTCACAAGTTACAACAGAACAACAACCCAGTGTAGTCCGACATGTGTGTAATGGGGAGGGGAGGATGTAAGCAGATCTTACTCCTACCTTTTATGGGGTAGAGATTGTACACGAATCATATGTATAGACAAAAAAAATCACTGATTGCTCTTTAACGGTCAGGTTTTTGGTTAAATGAACTAAGATTGTGCATCACAATTATATGTTCACTACCACAGGTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTGTAAGTGGCAAACAAGTATTAATGCTCCTATTTTTTTTCTTTTTACTTGATTCAAGTAGTTTCATTTGACTCCTTATAAATGATTTTAGATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAGGTAAAATACCCAGTTCTTGTTAAATCTATTTCTCCTTTCCATGTCGTAATTATTGTATGGTGCAATTCATGTTTTACTAGCTATCATACATACTTTAACTTGCTACAAATGGAACGACCGATTTCAGGTCAAACAATCAAACAATGTTATCAATTCTTAAAAAAAAAAGACGATCAAACGATCAAACCTTATATTAGCTATACTCCTTTGTTTTTATATAATTGATGAAATGGGACCAAATTCCTTCTTGTTCATGCATAAACAGGTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAGGTTATATATCTTACTTCGAGGTTTCTAAGGACACGTGTTACCTAAACATGCATACTTCATCTGGTTAAATTTGTTTCTTATTTTCCTTTTTAGTCCGTTCTTTTTTTGGCAACTCTGAACTTTCCACGTAGAATGTTTAAGACTACAAGATTAAAGGACATTTTGATACATTCTACGTATCTTTAGTTGAAAACCAGAATCAAATTGAAAAGGAAGGAGTACTAGTGCTGCTAGCTCAATTCACATTTCATTTTCATCTTTTTTCTCAGAGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTG</genome_strand>
        <mrna_strand>GTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT.........................................................................................ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG.........................................................................................................................................................................................................................................................................GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG.............................................................................................................................................................................................................................................................................AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E603867" ref_strand="+" ref_description="SGN-E603867 [67056]">
      <seq>ccaacttgttattttgggtaaacaggttgatgtgcctgtttatgcagcaggaacagatgtaaaacctgcagatatagcccgacaaggattacaagaggccaaaaagaagaacgtagatgtcgtcataatggatacagctggaagacttcagatagataaagctatgatggatgaattaaaagatgtgaaacgggtactgaaccccacagaggttttgcttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatcttgacgaagctagatggagattctaggggtggagcagctttaagtgtcaaggaggtatcaggaaagccaattaagctcgtaggaaggggtgaacgtatggaggaccttgaacctttctatcctgaccgcatggctggacgtattttagggatgggagatgttctatcatttgttgagaaagcccaagaagttatgcgtcaagaagatgctgaagatttgcagaagaagatcatgagtgcaaaatttgatttcaatgacttcctgaagcaaactcgggcagttgctcggatgggtaccatgtcccgcgttattggaatgatgcctggcatgggaaaggttactcctgcacaaattcgagaggcagagaagagcttaaagatcatggagtcaatgatagaagtcatgacaccagaggagaaggagcaaacagaattgttagcaggaatctcctggtagaagggaaacgtatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28561" stop="25107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28261" g_stop="28237" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="0.00"/>
            <acceptor a_prob="0.977" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28064" g_stop="27939" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="151" r_length="126" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.976" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27859" g_stop="27757" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="254" r_length="103" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="0.98"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26840" g_stop="26740" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="355" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26118" g_stop="25981" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="493" r_length="138" r_score="0.978"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89">
            <donor d_prob="0.945" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25891" g_stop="25748" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="637" r_length="144" r_score="0.972"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="25482" g_stop="25407" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="713" r_length="76" r_score="0.974"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269">
            <donor d_prob="0.881" d_score="0.96"/>
            <acceptor a_prob="0.948" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="25137" g_stop="25107" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="744" r_length="31" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E603867" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>744</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E603867" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28261" e_stop="28237"/>
          <exon e_start="28064" e_stop="27939"/>
          <exon e_start="27859" e_stop="27757"/>
          <exon e_start="26840" e_stop="26740"/>
          <exon e_start="26118" e_stop="25981"/>
          <exon e_start="25891" e_stop="25748"/>
          <exon e_start="25482" e_stop="25407"/>
          <exon e_start="25137" e_stop="25107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAGGTGGGGTCTTTTTACTACACGACACATACATTCGTTTTTTCCTTGTTCTAAGTTTAACCTTGCAGTTTACTTTGCTTCAACTTCTCTTGATTAGCAAAGTCAACATTTCTACTTTTGAACTTAGAGCAGCAAAGATGAAGGAGAGTTAATGATGGAAGTAGATGATTATAAATATCCAAAAGCTTTTCTTCCTTGAAGGGATCATGCGGCGAAACAAATACTAAAACGTAAAGAGTGATTGGACCACAAACTTCAGATTTCCTCTATGTTCAACATGTCTTTTGCGTATTATCTTGGAAGAAATTTACTTTTGTCAAGGTTTAAACTGAATGGAATAGATTTGAAGCCAATAGGCAATTGATGATATCTGTTTAAGTGGTTGTGTCAAATGTTGCCAATATGGGTCACAAGTTACAACAGAACAACAACCCAGTGTAGTCCGACATGTGTGTAATGGGGAGGGGAGGATGTAAGCAGATCTTACTCCTACCTTTTATGGGGTAGAGATTGTACACGAATCATATGTATAGACAAAAAAAATCACTGATTGCTCTTTAACGGTCAGGTTTTTGGTTAAATGAACTAAGATTGTGCATCACAATTATATGTTCACTACCACAGGTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTGTAAGTGGCAAACAAGTATTAATGCTCCTATTTTTTTTCTTTTTACTTGATTCAAGTAGTTTCATTTGACTCCTTATAAATGATTTTAGATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAGGTAAAATACCCAGTTCTTGTTAAATCTATTTCTCCTTTCCATGTCGTAATTATTGTATGGTGCAATTCATGTTTTACTAGCTATCATACATACTTTAACTTGCTACAAATGGAACGACCGATTTCAGGTCAAACAATCAAACAATGTTATCAATTCTTAAAAAAAAAAGACGATCAAACGATCAAACCTTATATTAGCTATACTCCTTTGTTTTTATATAATTGATGAAATGGGACCAAATTCCTTCTTGTTCATGCATAAACAGGTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAGGTTATATATCTTACTTCGAGGTTTCTAAGGACACGTGTTACCTAAACATGCATACTTCATCTGGTTAAATTTGTTTCTTATTTTCCTTTTTAGTCCGTTCTTTTTTTGGCAACTCTGAACTTTCCACGTAGAATGTTTAAGACTACAAGATTAAAGGACATTTTGATACATTCTACGTATCTTTAGTTGAAAACCAGAATCAAATTGAAAAGGAAGGAGTACTAGTGCTGCTAGCTCAATTCACATTTCATTTTCATCTTTTTTCTCAGAGGAGAGGGAGCAACCAGAATTGTTAGCAGA</genome_strand>
        <mrna_strand>CCAACTTGTTATTTTGGGTAAACAG............................................................................................................................................................................GTTGATGTGCCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGATATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAACGTAGATGTCGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAGCTATGATGGATGAATTAAAAGATGTGAAACGGGTACTGAACCCCACAGAGGTTTTGCTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGGAAAGCCAATTAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGGATGGGAGATGTTCTATCATTTGTTGAGAAAGCCCAAGAAGTT.........................................................................................ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTCGGATGGGTACCATGTCCCGCGTTATTGGAATGATGCCTGGCATGGGAAAG.........................................................................................................................................................................................................................................................................GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATCATGGAGTCAATGATAGAAGTCATGACACCAG.............................................................................................................................................................................................................................................................................AGGAGAAGGAGCAAACAGAATTGTTAGCAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E262707" ref_strand="+" ref_description="SGN-E262707 [cLEG-63-C14]">
      <seq>tacaccttaacaatctttatctatatatcttctttacgagtacacagaatatctaaacacaacttcatccattctcatgttcactgataagtgggggaacaggttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagcccgacaaggattacaagaggccaaaaagaagaatgtagatgtagtcataatggatacagctggaagacttcagatagataaaactatgatggatgaattaaaagacgtgaaacgggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatcttgacgaagctagatggagattctaggggtggagcagctttaagtgtcaaggaggtatcaggaaagccaatcaagctcgtaggaaggggtgaacgtatggaggaccttgaacctttctatcctgaccgcatggctggacgtattttangaatgggagatgttctatcgtttgttgagaaagcccaagaagttatgcgtcaagaagatgctgaaagattgcagaagaagatcatgagtgcaaaatttgatttcaatgacttcctgaagcaaactccggcagttgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28466" stop="25498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28166" g_stop="27939" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27859" g_stop="27757" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="331" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26840" g_stop="26740" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="432" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26118" g_stop="25981" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="570" r_length="138" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89">
            <donor d_prob="0.945" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25891" g_stop="25798" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="664" r_length="94" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E262707" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28166" e_stop="27939"/>
          <exon e_start="27859" e_stop="27757"/>
          <exon e_start="26840" e_stop="26740"/>
          <exon e_start="26118" e_stop="25981"/>
          <exon e_start="25891" e_stop="25798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAGGTGGGGTCTTTTTACTACACGACACATACATTCGTTTTTTCCTTGTTCTAAGTTTAACCTTGCAGTTTACTTTGCTTCAACTTCTCTTGATTAGCAAAGTCAACATTTCTACTTTTGAACTTAGAGCAGCAAAGATGAAGGAGAGTTAATGATGGAAGTAGATGATTATAAATATCCAAAAGCTTTTCTTCCTTGAAGGGATCATGCGGCGAAACAAATACTAAAACGTAAAGAGTGATTGGACCACAAACTTCAGATTTCCTCTATGTTCAACATGTCTTTTGCGTATTATCTTGGAAGAAATTTACTTTTGTCAAGGTTTAAACTGAATGGAATAGATTTGAAGCCAATAGGCAATTGATGATATCTGTTTAAGTGGTTGTGTCAAATGTTGCCAATATGGGTCACAAGTTACAACAGAACAACAACCCAGTGTAGTCCGACATGTGTGTAATGGGGAGGGGAGGATGTAAGCAGATCTTACTCCTACCTTTTATGGGGTAGAGATTGTACACGAATCATATGTATAGACAAAAAAAATCACTGATTGCTCTTTAACGGTCAGGTTTTTGGTTAAATGAACTAAGATTGTGCATCACAATTATATGTTCACTACCACAGGTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTGTAAGTGGCAAACAAGTATTAATGCTCCTATTTTTTTTCTTTTTACTTGATTCAAGTAGTTTCATTTGACTCCTTATAAATGATTTTAGATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTA</genome_strand>
        <mrna_strand>TACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTANGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT.........................................................................................ATGCGTCAAGAAGATGCTGAAAGATTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCCGGCAGTTGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E266514" ref_strand="+" ref_description="SGN-E266514 [cLEI-5-G22]">
      <seq>caacttgttattttgggtaaacaggttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagcccgacaaggattacaagaggccaaaaagaagaatgtagatgtagtcataatggatacagctggaagacttcagatagataaaactatgatggatgaattaaaagacgtgaaacgggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatcttgacgaagctagatggagattctaggggtggagcagctttaagtgtcaaggaggtatcaagaaagccaatcaagctcgtaggaaggggtgaacgtatggaggaccttgaacctttctatcctgaccgcatggctggacgtattttaggaatgggagatgttctatcgtttgtcgagaaagcccaagaagttatgcgtcaagaagatgctgaagatctgcagaagaagatcatgagtgcaaaatttgatttcaatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28560" stop="25526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28260" g_stop="28237" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="0.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28064" g_stop="27939" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="150" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27859" g_stop="27757" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="253" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26840" g_stop="26740" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="354" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26118" g_stop="25981" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="492" r_length="138" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89">
            <donor d_prob="0.945" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25891" g_stop="25826" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="558" r_length="66" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E266514" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266514" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28260" e_stop="28237"/>
          <exon e_start="28064" e_stop="27939"/>
          <exon e_start="27859" e_stop="27757"/>
          <exon e_start="26840" e_stop="26740"/>
          <exon e_start="26118" e_stop="25981"/>
          <exon e_start="25891" e_stop="25826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAGGTGGGGTCTTTTTACTACACGACACATACATTCGTTTTTTCCTTGTTCTAAGTTTAACCTTGCAGTTTACTTTGCTTCAACTTCTCTTGATTAGCAAAGTCAACATTTCTACTTTTGAACTTAGAGCAGCAAAGATGAAGGAGAGTTAATGATGGAAGTAGATGATTATAAATATCCAAAAGCTTTTCTTCCTTGAAGGGATCATGCGGCGAAACAAATACTAAAACGTAAAGAGTGATTGGACCACAAACTTCAGATTTCCTCTATGTTCAACATGTCTTTTGCGTATTATCTTGGAAGAAATTTACTTTTGTCAAGGTTTAAACTGAATGGAATAGATTTGAAGCCAATAGGCAATTGATGATATCTGTTTAAGTGGTTGTGTCAAATGTTGCCAATATGGGTCACAAGTTACAACAGAACAACAACCCAGTGTAGTCCGACATGTGTGTAATGGGGAGGGGAGGATGTAAGCAGATCTTACTCCTACCTTTTATGGGGTAGAGATTGTACACGAATCATATGTATAGACAAAAAAAATCACTGATTGCTCTTTAACGGTCAGGTTTTTGGTTAAATGAACTAAGATTGTGCATCACAATTATATGTTCACTACCACAGGTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTGTAAGTGGCAAACAAGTATTAATGCTCCTATTTTTTTTCTTTTTACTTGATTCAAGTAGTTTCATTTGACTCCTTATAAATGATTTTAGATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGAC</genome_strand>
        <mrna_strand>CAACTTGTTATTTTGGGTAAACAG............................................................................................................................................................................GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAAGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTCGAGAAAGCCCAAGAAGTT.........................................................................................ATGCGTCAAGAAGATGCTGAAGATCTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E246312" ref_strand="+" ref_description="SGN-E246312 [cLEF-40-N15]">
      <seq>cggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgattgctggagacgtgtacagacctgctgctattgaccaacttgttattttgggtaaacaggttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagcccgacaaggattacaagaggccaaaaagaagaatgtagatgtagtcataatggatacagctggaagacttcagatagataaaactatgatggatgaattaaaagacgtgaaacgggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatcttgacgaagctagatggagattctaggggtggagcagctttaagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28879" stop="26448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28579" g_stop="28516" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28314" g_stop="28237" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="142" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28064" g_stop="27939" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="268" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27859" g_stop="27757" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="371" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26840" g_stop="26748" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="464" r_length="93" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E246312" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28579" e_stop="28516"/>
          <exon e_start="28314" e_stop="28237"/>
          <exon e_start="28064" e_stop="27939"/>
          <exon e_start="27859" e_stop="27757"/>
          <exon e_start="26840" e_stop="26748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTG</genome_strand>
        <mrna_strand>CGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAG............................................................................................................................................................................GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E332839" ref_strand="+" ref_description="SGN-E332839 [cTOD-18-J16]">
      <seq>ttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggtggagaggtttctgaactggtttttgctaaatctaagcccaccgtaatactattggccggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgattgctggagacgtgtacagacctgctgctattgaccaacttgttattttgggtaaacaggttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagcccgacaaggattacaagaggccaaaaagaagaatgtagatgtagtcataatggatacagctggaagacttcagatagataaaactatgatggatgaattaaaagacgtgaaacgggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaatttggattactggtgccatcttgacgaagctagatggagattctaggggtggagcagcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="29221" stop="26453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28999" g_stop="28986" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="14" r_length="14" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="0.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="116" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28668" g_stop="28516" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="269" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28314" g_stop="28237" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="347" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28064" g_stop="27939" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="473" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="27859" g_stop="27757" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="576" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="26840" g_stop="26753" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="664" r_length="88" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E332839" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28999" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28516"/>
          <exon e_start="28314" e_stop="28237"/>
          <exon e_start="28064" e_stop="27939"/>
          <exon e_start="27859" e_stop="27757"/>
          <exon e_start="26840" e_stop="26753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTT</genome_strand>
        <mrna_strand>TTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAG............................................................................................................................................................................GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTTGGATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E250623" ref_strand="+" ref_description="SGN-E250623 [cLEG-7-M2]">
      <seq>ttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggtggagaggtttctgaactggtttttgctaaatctaagcccaccgtaatactattggccggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgattgctggagacgtgtacagacctgctgctattgaccaacttgttattttgggtaaacaggttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagcccgacaaggattacaagaggccaaaaagaagaatgtagatgtagtcataatggatacagctggaagacttcagatagataaaactatgatggatgaattaaaagacgtgaaacgggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatcttgacgaagctagatggagattctaggggtggagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="29149" stop="26458"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28849" g_stop="28811" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28668" g_stop="28516" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="192" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28314" g_stop="28237" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="270" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28064" g_stop="27939" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="396" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27859" g_stop="27757" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="499" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26840" g_stop="26758" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="582" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E250623" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28849" e_stop="28811"/>
          <exon e_start="28668" e_stop="28516"/>
          <exon e_start="28314" e_stop="28237"/>
          <exon e_start="28064" e_stop="27939"/>
          <exon e_start="27859" e_stop="27757"/>
          <exon e_start="26840" e_stop="26758"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCA</genome_strand>
        <mrna_strand>TTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAG............................................................................................................................................................................GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E266766" ref_strand="+" ref_description="SGN-E266766 [cLEI-7-C24]">
      <seq>agttgcatgctgattgctggagacgtgtacagacctgctgctattgaccaacttgttattttgggtaaacaggttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagcccgacaaggattacaagaggccaaaaagaagaatgtagatgtagtcataatggatacagctggaagacttcagatagataaaactatgatggatgaattaaaagacgtgaaacgggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaaaaagctgcagctttggtcacaacattcaatctcgaaattggaattactggtgccatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28608" stop="26493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28308" g_stop="28237" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28064" g_stop="27939" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="198" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27859" g_stop="27757" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="301" r_length="103" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="0.98"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26840" g_stop="26793" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="349" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E266766" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>349</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28308" e_stop="28237"/>
          <exon e_start="28064" e_stop="27939"/>
          <exon e_start="27859" e_stop="27757"/>
          <exon e_start="26840" e_stop="26793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCT</genome_strand>
        <mrna_strand>AGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAG............................................................................................................................................................................GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAAAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E207182" ref_strand="+" ref_description="SGN-E207182 [cLEC-30-M10]">
      <seq>tgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgattgctggagacgtgtacagacctgctgctattgaccaacttgttattttgggtaaacagtgggggaacaggttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagcccgacaaggattacaagaggccaaaaagaagaatgtagatgtagtcataatggatacagctggaagacttcagatagataaaactatgatggatgaattaaaagacgtgaaacgggtactgaaccccacagaggttttacttgttgtggatgcaatgactggccaagaagctgcagctttggtcacaacattcaatctcgaaattggaattact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28864" stop="26503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28564" g_stop="28516" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28314" g_stop="28237" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="127" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28236" i_stop="28076" i_length="161">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.515" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28075" g_stop="27939" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="264" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27859" g_stop="27757" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="367" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26840" g_stop="26803" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="405" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E207182" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28564" e_stop="28516"/>
          <exon e_start="28314" e_stop="28237"/>
          <exon e_start="28075" e_stop="27939"/>
          <exon e_start="27859" e_stop="27757"/>
          <exon e_start="26840" e_stop="26803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGGTACTTCTACACTCATAAAACATGCAAATGATCTATTACATGCCACAGACAGTTCGCTTCTTGTGAAATATGGCTTTTGACTAGCATGGTCATATCACTTTTCACATGCTTTGATCTACAGCAAGGTCGCACTAATATTTATGCTCTGTGGTTGATCGTTGAGGAACATCTTTTTTTTCTTAACCATGGACATTCACATATTGCCAAAGAAGTGTATCTTGCCATGCATACTTTTGACTTACCACACTTGCATTTTCATGTTCCAAGAACTAACCGTCTGATACGAAAAACTTTCCTTAACAATCCAGGCCATTCTGTTATCTGAGGTCTGCTTCTCACAGAGAGAGCAAAATATCTGTTGTTTGTGTAATGTTGCCACCGAGCGTTTTTCTCAAGAGAACGTTATATTGCTTCTCATCGAAGCTTGGAGACTTATAGCACAGCTGTATATGACAGTTAATTTCTTTCTTGTGCTTGTCTTGTACGAATATAAGTTATTTTTGGGACTTCATTACATAAATATGGATGTTATCTTTGATAATCTGAAGCTGTTTAACTATTTTAATACTCCCTCTATTCACGCGACATGCTTGGTTGATATGGAGTTTAAGGAATTAGTTTCATTTACTTGAAACTTTTTTAGTCAGAAAAAAATAAACGGAATTGGTTTTTTGAGGTTAATGGAGAGAGGCATTCCATATCTGAGTTGTTAAATGAATCTGAACTCTTGAAATTTGTTACTAGATAGTGCATTAAAATTCTGTAACATCTCAAAACAGAAATCATAGTACTGCACTTTCATTGAGTTATTACTGACACAAGGACATAATTTCTGCCCTATACCAATCATTTCATGTTGAAAACAGAAAATTCCGATTTGTTTTCTCTCTTATCGTTCACATTGATGAAATTGTAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATTACT</genome_strand>
        <mrna_strand>TGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAG.................................................................................................................................................................TGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E553686" ref_strand="+" ref_description="SGN-E553686 [cTSC-1-O16]">
      <seq>gtttgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggtggagaggtttctgaactggtttttgctaaatctaagcccaccgtaatactattggccggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgattgctggagacgtgtacagacctgctgctattgaccaacttgttattttgggtaaacaggttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagcccgacaaggattacaagaggccaaaaagaagaatgtagatgtagtcataatggatacagctggaagacttcagatagataaaactatgatggatgaattaaaagacgtgaaaacggtactgaaccccacagaggttttacttgttgtggatgcaatgactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31360" stop="27472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31060" g_stop="30876" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="315" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="383" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="485" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28516" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="638" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28314" g_stop="28237" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="639" r_stop="716" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28064" g_stop="27939" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="717" r_stop="842" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="27859" g_stop="27772" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="843" r_stop="930" r_length="88" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E553686" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>930</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553686" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31060" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28516"/>
          <exon e_start="28314" e_stop="28237"/>
          <exon e_start="28064" e_stop="27939"/>
          <exon e_start="27859" e_stop="27772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGGTCATATCATCTTAGTTTTTGAATTCCACTATAACTTTTTCTAGTAGTTGTATTTAAACCTTTCTCTTAGTTCTTGTAGATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTG</genome_strand>
        <mrna_strand>GTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAG............................................................................................................................................................................GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG...............................................................................ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAAACGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E256609" ref_strand="+" ref_description="SGN-E256609 [cLEG-38-B2]">
      <seq>tagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaagaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggtggagaggtttctgaactggtttttgctaaatctaagcccaccgtaatactattggccggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgattgctggagacgtgtacagacctgctgctattgaccaacttgttattttgggtaaacaggttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagcccgacaaggattacaagaggccaaaaagaagaatgtagatgtagtcataatggatacagctggaagacttcagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31038" stop="27637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30738" g_stop="30671" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="136" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="238" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28668" g_stop="28516" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="391" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28314" g_stop="28237" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="469" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28064" g_stop="27939" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="595" r_length="126" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E256609" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E256609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30738" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28516"/>
          <exon e_start="28314" e_stop="28237"/>
          <exon e_start="28064" e_stop="27939"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG</genome_strand>
        <mrna_strand>TAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAAGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAG............................................................................................................................................................................GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E341894" ref_strand="+" ref_description="SGN-E341894 [cTOF-9-G5]">
      <seq>tatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggtggagaggtttctgaactggtttttgctaaatctaagcccaccgtaatactattggccggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgatttggtggagacgtgtacagaccctgctgctattgaccaatcttgttattttgggtaaacaagttgatgtacctgtttatgcagcaggaacagatgtaaaacctgcagaaatagccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="29322" stop="27710"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29022" g_stop="28986" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="0.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="139" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28668" g_stop="28516" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="292" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28314" g_stop="28237" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="373" r_length="81" r_score="0.897"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="0.90"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28064" g_stop="28010" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="428" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E341894" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29022" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28516"/>
          <exon e_start="28314" e_stop="28237"/>
          <exon e_start="28064" e_stop="28010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGA-TTGCTGGAGACGTGTACAGA-CCTGCTGCTATTGACCAA-CTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCC</genome_strand>
        <mrna_strand>TATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTTGGTGGAGACGTGTACAGACCCTGCTGCTATTGACCAATCTTGTTATTTTGGGTAAACAA............................................................................................................................................................................GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E339009" ref_strand="+" ref_description="SGN-E339009 [cTOF-6-I22]">
      <seq>ttgtttgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggggaagaggtttctgaactggtttttgctaaatctaagcccaccgtaatactattggccggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgattgctggagacgtgtacagacctgctgctattgaccaacttgntattttgggtaaacaggttgatgtacctgtttatgcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31362" stop="27742"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31062" g_stop="30876" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="317" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="385" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="487" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28516" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="640" r_length="153" r_score="0.987"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28314" g_stop="28237" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="718" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.977" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28064" g_stop="28042" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="719" r_stop="741" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E339009" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31062" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28516"/>
          <exon e_start="28314" e_stop="28237"/>
          <exon e_start="28064" e_stop="28042"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGC</genome_strand>
        <mrna_strand>TTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGGGAAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGNTATTTTGGGTAAACAG............................................................................................................................................................................GTTGATGTACCTGTTTATGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E332256" ref_strand="+" ref_description="SGN-E332256 [cTOD-17-G6]">
      <seq>atcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggtggagaggtttctgaactggtttttgctaaatctaagcccaccgtaatactattggccggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgattgctggagacgtgtacagacctgctgctattgaccaacttgttattttgggtaaacangttgatgtacctgtttatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31266" stop="27745"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30966" g_stop="30876" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="221" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="289" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="391" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28516" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="544" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28314" g_stop="28237" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="622" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.977" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28064" g_stop="28045" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="642" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E332256" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30966" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28516"/>
          <exon e_start="28314" e_stop="28237"/>
          <exon e_start="28064" e_stop="28045"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGC</genome_strand>
        <mrna_strand>ATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAN............................................................................................................................................................................GTTGATGTACCTGTTTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E250723" ref_strand="+" ref_description="SGN-E250723 [cLEG-7-M14]">
      <seq>gaactggtttttgctaaatctaagcccaccgtaatactattggccggtctacaaggtgtcgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgattgctggagacgtgtacagacctgctgctattgaccaacttgttattttgggtaaacaggttgatgtacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="28923" stop="27752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28623" g_stop="28516" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28314" g_stop="28237" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="186" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28064" g_stop="28052" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="199" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E250723" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>199</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28623" e_stop="28516"/>
          <exon e_start="28314" e_stop="28237"/>
          <exon e_start="28064" e_stop="28052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTGTGCCATGTCACATTAGCAACAATAAGATTATATATCATTTTATTTTAGATGCTTCTTTCTGTTCTTCTACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTG</genome_strand>
        <mrna_strand>GAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTCGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAG............................................................................................................................................................................GTTGATGTACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E343935" ref_strand="+" ref_description="SGN-E343935 [cTOF-12-A19]">
      <seq>ccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggtggagaggtttctgaactggtttttgctaaatctaagcccaccgtaatactattggccggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaaagaagcagggtaagagttgcatgctgattgctggagacgtgtacagacctgctgctattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31333" stop="27962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31033" g_stop="30876" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="288" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="356" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="458" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28516" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="611" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28314" g_stop="28262" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="664" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E343935" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31033" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28516"/>
          <exon e_start="28314" e_stop="28262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGTGGACTTCCAAACTTCACCTTCTCCCTTTCCTGACCTTCCTTTACTTTCTCTCACTCCCCTCTCTCTTGCTCATTCTATTGCAATTTACATATATGGTCGTAGAACCTGCATTTCTCCAAGTGCCTTCTAATATTAGCATTTTCCCTTTTTCTCATTCTATTGTCAAACCATTTATGGGCACTGGTGGCATGGTCTGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGA</genome_strand>
        <mrna_strand>CCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG.........................................................................................................................................................................................................GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E706332" ref_strand="+" ref_description="SGN-E706332 [FA29CF11]">
      <seq>cacgaaaaaagcttcaatttttgcttcttcttttgattgtttgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaaaggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattccaggtgtaaaaccacatcaccaactacttaagactgtacgtgacgagcttgtgaaacctgatgggtggagaggtttctgaactggtttttgctaaatcctaagcccacccgtaatactattggccggtctacaaggtgttgggaagacaactgttagtgcaaagttagctttatatctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31397" stop="28224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31098" g_stop="30876" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="353" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="421" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="523" r_length="102" r_score="0.961"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28524" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="671" r_length="148" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E706332" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706332" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31098" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAA-CTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAAT-CTAAGCCCA-CCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAA</genome_strand>
        <mrna_strand>CACGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAAGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCCAGGTGTAAAACCACATCACCAACTACTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACCTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCCTAAGCCCACCCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E211661" ref_strand="+" ref_description="SGN-E211661 [cLEC-67-D8]">
      <seq>aaaaagcttcaatttttgcttcttcttttgattgtttgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggtngagaggtttctgaactggtttttgctaaatctaagcccaccgtaatactattggccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31393" stop="28278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31093" g_stop="30876" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="348" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="416" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="518" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28578" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="609" r_length="91" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E211661" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E211661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31093" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCG</genome_strand>
        <mrna_strand>AAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGTNGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E474656" ref_strand="+" ref_description="SGN-E474656 [cSTB-37-E4]">
      <seq>cttctttctcttcaactatggcttctcaccatttctttccactttctaaagccaccctttcaacttccaaacttaaccccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggttactataagaagggaaatgcgtggagttattagagctgagatgtttggacagctcactagtggacttgaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacattgtggaacctatgagagacatcaggagggctcttttagaagctgatgttagtctccctgttgtcagaaggtttgttcagtctgttagtgaagaagccgttgggactggcttgattcgaggagtaaagcctgatcagcaactagttaaaattgtacgtgacgagcttgtgaaactgatgggtggagaggtttctgaactggtttttgctaaatctaaacccaccgtaatactat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31327" stop="28284"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31027" g_stop="30876" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.73"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="288" r_length="136" r_score="0.869"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.977" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="356" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="0.96"/>
            <acceptor a_prob="0.920" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="458" r_length="102" r_score="0.931"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28584" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="543" r_length="85" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E474656" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474656" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31027" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28584"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGG------TAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTAT</genome_strand>
        <mrna_strand>CTTCTTTCTCTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCAACTTCCAAACTTAACCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTTACTATAAGAAGGGAAATGCGTGGAGTTATTAGAGCTGAGATGTTTGGACAGCTCACTAGTGGACTTGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATTGTGGAACCTATGAGAGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCTGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGGACTGGCTTGATTCGAGGAGTAAAGCCTGATCAGCAACTAGTTAAA..............................................................................................................................................ATTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAACCCACCGTAATACTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E267086" ref_strand="+" ref_description="SGN-E267086 [cLEI-4-O14]">
      <seq>tttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgatgggtggagaggtttctgaactggtttttgctaaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31352" stop="28303"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31052" g_stop="30876" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="307" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="375" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="477" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28603" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="543" r_length="66" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E267086" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267086" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31052" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28603"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCT</genome_strand>
        <mrna_strand>TTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E482899" ref_strand="+" ref_description="SGN-E482899 [cSTE-5-P22]">
      <seq>aagaaaaaaaaaagcttcaatttttactcccattttcttcttctgattgtttgttctttaatccaccatggaagccactgcttctttctcttcaactatggcttctcaccatttctttccactttctaaagccaccctttcaacttccaaacttaaccccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcattcactagggatacatggagggtgatcaattccaagaatgtggttactataagaagggaaatgcgtggagttattagagctgagatgtttggacagcttactagtggacttgaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacattgtggaacctatgagagacatcaggagggctcttttagaagctgatgttagtctccctgttgtcagaaggtttgttcagtctgttagtgaagaagccgttgggactggcttgattcgaggagtaaagcctgatcagcaactagttaaaattgtacgtgacgagcttgtgaaactgatgggtggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31403" stop="28331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31074" g_stop="30876" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="232" r_length="198" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.73"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="368" r_length="136" r_score="0.862"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.977" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="436" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="0.96"/>
            <acceptor a_prob="0.920" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="538" r_length="102" r_score="0.931"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28631" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="576" r_length="38" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E482899" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="0.932" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31074" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28631"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGG------TAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGA</genome_strand>
        <mrna_strand>TTCTTCTTCTGATTGTTTGTTCTTTAATCC-ACCATGGAAGCCACTGCTTCTTTCTCTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCAACTTCCAAACTTAACCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTCACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTTACTATAAGAAGGGAAATGCGTGGAGTTATTAGAGCTGAGATGTTTGGACAGCTTACTAGTGGACTTGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATTGTGGAACCTATGAGAGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCTGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGGACTGGCTTGATTCGAGGAGTAAAGCCTGATCAGCAACTAGTTAAA..............................................................................................................................................ATTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E266144" ref_strand="+" ref_description="SGN-E266144 [cLEI-6-D14]">
      <seq>aaagcttcaatttttgcttcttcttttgattgtttgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31391" stop="28340"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31091" g_stop="30876" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="346" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="414" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="516" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28640" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="545" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E266144" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31091" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGAT</genome_strand>
        <mrna_strand>AAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E268785" ref_strand="+" ref_description="SGN-E268785 [cLEM-16-L6]">
      <seq>aaagcttcaatttttgcttcttcttttgattgtttgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgattcgaggtgtaaaaccagatcagcaactagttaagactgtacgtgacgagcttgtgaaactgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31391" stop="28340"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31091" g_stop="30876" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="346" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="414" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="516" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28640" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="545" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E268785" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31091" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTGACGAGCTTGTGAAACTGAT</genome_strand>
        <mrna_strand>AAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG..............................................................................................................................................ACTGTACGTGACGAGCTTGTGAAACTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E412731" ref_strand="+" ref_description="SGN-E412731 [STM-16-B6]">
      <seq>cctggggccggaagaaaaaggcttcaatttccactcccattttcttcttctgattgtttgttctttaatccaccatggaagccactgcttctttctcttcaactatggcttctcaccatttctttccactttctaaagccaccctttcaacttccaaacttaaccccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactatggatacatggagggtgatcaattccaagaatgtggttactataagaagggaaatgcgtggagttattagagctgagatgtttggacagcttactagtggacttgaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacattgtggaacctatgagagacatcacgagggctcttttagaggctgatgttagtctccctgttgtcagaaggtttgttcagtctgttagtgaacaagccgttgggactggcttgattcgaggagtaaagcctgatcagcaactagttaaaattgtacgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31374" stop="28504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31074" g_stop="30876" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="239" r_length="198" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.70"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="375" r_length="136" r_score="0.854"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.977" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="443" r_length="68" r_score="0.941"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="0.92"/>
            <acceptor a_prob="0.920" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28811" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="545" r_length="102" r_score="0.922"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142">
            <donor d_prob="0.999" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28668" g_stop="28659" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="555" r_length="10" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E412731" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E412731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31074" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28811"/>
          <exon e_start="28668" e_stop="28659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGG------TAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGGTATGTATTTTTGAACTGATGACTCTGAACAATACACATTTGTACATTGATAACAGACGGTCACCCTTCTGTTGTTAATTGCTTGCACAATTTGCTATCAGCTCGATCTGAACATTTTCTTTGTCTCATTTGGTTGGTGTAGACTGTACGTG</genome_strand>
        <mrna_strand>TTCTTCTTCTGATTGTTTGTTCTTTAATCC-ACCATGGAAGCCACTGCTTCTTTCTCTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCAACTTCCAAACTTAACCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................ATGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTTACTATAAGAAGGGAAATGCGTGGAGTTATTAGAGCTGAGATGTTTGGACAGCTTACTAGTGGACTTGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATTGTGGAACCTATGAGAGACATCACGAGGGCTCTTTTAGAGGCTGAT.........................................................................GTTAGTCTCCCTGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAACAAGCCGTTGGGACTGGCTTGATTCGAGGAGTAAAGCCTGATCAGCAACTAGTTAAA..............................................................................................................................................ATTGTACGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E471089" ref_strand="+" ref_description="SGN-E471089 [cSTB-22-K16]">
      <seq>cctcgtgccggaagaaaaaggcttcaatttccactcccattttcttcttctgattgtttgttctttaatccaccatggaagccactgcttctttctcttcaactatggcttctcaccatttctttccactttctaaagccaccctttcaacttccaaacttaaccccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggttactataagaagggaaatgcgtggagttattagagctgagatgtttggacagcttactagtggacttgaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacattgtggaacctatgagagacatcaggagggctcttttagaggctgatgttagtctccctgttgtcagaaggtttgttcagtctgttagtgaagaagccgttgggactggcttgattcgaggagtaaagcctgatcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31374" stop="28522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31074" g_stop="30876" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="239" r_length="198" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.73"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="375" r_length="136" r_score="0.862"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.977" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="443" r_length="68" r_score="0.956"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="0.94"/>
            <acceptor a_prob="0.920" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28822" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="534" r_length="91" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E471089" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E471089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31074" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGG------TAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGC</genome_strand>
        <mrna_strand>TTCTTCTTCTGATTGTTTGTTCTTTAATCC-ACCATGGAAGCCACTGCTTCTTTCTCTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCAACTTCCAAACTTAACCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTTACTATAAGAAGGGAAATGCGTGGAGTTATTAGAGCTGAGATGTTTGGACAGCTTACTAGTGGACTTGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATTGTGGAACCTATGAGAGACATCAGGAGGGCTCTTTTAGAGGCTGAT.........................................................................GTTAGTCTCCCTGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGGACTGGCTTGATTCGAGGAGTAAAGCCTGATCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E724404" ref_strand="+" ref_description="SGN-E724404 [FC24AA11]">
      <seq>aaaaaagcttcaatttttgcttcttcttttgattgtttgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcgaattggaaaatgcttggaacatactcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgaggaacatcaggagggttcttttaaaagctgatgttagtctcccagttgtcaaaaggtttgttcagtctgttagtgaaaaagccgttggcactggtttgattcgaggtgtaaaaccaaatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31394" stop="28524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31094" g_stop="30876" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="349" r_length="130" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="417" r_length="68" r_score="0.956"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="0.94"/>
            <acceptor a_prob="0.920" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28824" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="506" r_length="89" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E724404" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E724404" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31094" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCA</genome_strand>
        <mrna_strand>AAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGAATTGGAAAATGCTTGGAACATACTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGAACATCAGGAGGGTTCTTTTAAAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAAAAGGTTTGTTCAGTCTGTTAGTGAAAAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAAATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E318539" ref_strand="+" ref_description="SGN-E318539 [cTOB-10-F12]">
      <seq>aagaaaaaagcttcaatttttgcttcttcttttgattgtttgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcagaaggtttgttcagtctgttagtgaagaagccgttggcactggtttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31397" stop="28545"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31097" g_stop="30876" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="352" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="420" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28845" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="488" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E318539" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318539" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31097" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28845"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGAT</genome_strand>
        <mrna_strand>AAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E295369" ref_strand="+" ref_description="SGN-E295369 [cLET-23-I16]">
      <seq>aagaaaaaagcttcaatttttgcttcttcttttgattgtttggtctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagaggttttgaccaaggaaaacatcgtggaacctatgagggacatcaggagggctcttttagaagctgatgttagtctcccagttgtcaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31397" stop="28592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31097" g_stop="30876" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="352" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="28986" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="420" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28912" g_stop="28892" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="441" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E295369" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295369" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31097" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29053" e_stop="28986"/>
          <exon e_start="28912" e_stop="28892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATATGTGGTTATATATAATGATAAAGTGGCTGTTGTTTGAATTCCTTGTGCCTCAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGATGTATGTTGCTTACTGTTTCAACAACTAATCTCTATACATAAAATTTCGCCGCTTATTTAACTTTAATCGGCAGGTTAGTCTCCCAGTTGTCAGA</genome_strand>
        <mrna_strand>AAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGGTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT.........................................................................GTTAGTCTCCCAGTTGTCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E735717" ref_strand="+" ref_description="SGN-E735717 [LC02CH12]">
      <seq>gaggggaaaaagcttcaatttttgcttcttcttttgattgtttgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaagggaaatgagtggagttattagagctgagatgtttgggcagctcactagcggattggaaaatgcttggaacaagctcaaaggagaagggtggatgatgagttgtcgtagatggtaatattgatccattcgaggaggtgccagatggggtataatgaattatacttcaagagaagaaaccgggaagatgtataattgattgttaaactccaatgaagtgtatggaaagggaaggggccttgctactataaggttttaaatgcaaagagtacaacatattaacaactatggcctatgggtcattggatttctataacagggatatacttctcctttttagttccatacattattgctggatattataaagttgtaggaataaattaattggagagtattttactgttaaaaatgtgacttgtctgccttgtccaaattcaaatttctaatcatattttctatatcctcaatctttcaaattttaaaggttgaaagtcttattgcccttgttactaaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31395" stop="28806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31100" g_stop="30876" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30671" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="354" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30670" i_stop="29537" i_length="1134">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29536" g_stop="29106" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="785" r_length="431" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E735717" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735717" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31100" e_stop="30876"/>
          <exon e_start="30800" e_stop="30671"/>
          <exon e_start="29536" e_stop="29106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGGTAAAAGCAAAAAAAATACTCTTTTTTAAATTTAAAAATGAGCTAGTTTTATGTGAAAATTTGAAGTATGGGAGCTTGAATTGTTAATCTTGAGTAGGTACATGTTAGAGTGTGTTAGAGTCGCATGTTGGTTGGTTGGGAATGGACCGGTGGTCTGTTATGTGGACTTGGACGATCCTCTCTTCGTGAGCTAACGTTTTGAGGTTGAGTTAGGCGTAAGTGTCATATCTTTATATGCTATCGTAGCTACTTAGCTAGGTTCATACCTGTTTGGACTCCCGGTTTATGCTCTAGTTAGGCATGAGGTGTTAAAGTGGGTTATAGTCCCAAATCAGTTTATATGGATTGGGTAATCCTTCCGTCGTGAGCTAGTTTTTGGAGTTAGGCCCGGGTGTCATATCTGGACTGTTTTGAAAGGGAACTGAAAATCGATACCTTGGATAGGGATGATAGTTCAAAAATATGACTTCAAGAACAATGTCTTCTTGTTTTTTCATATTCAGGATAATATCTTAAGATAATTCATTAGTACATCAGAGGTGTTTATTTGATGTCATCACAATTTCAGTTAAAGTAAATGCCTTTGCTAAGTAAAGGCTGTGAGATAAGATAGGAGTGAACTAAAGCTTCTTCAAAATGTGGCATGTAGTCATCCAAGGGTCATATCAATCTTGGTGAATGAGTTCAGCAAGACTTACAAAAAAAAATATAAAAACCTGGAATCGATCCTTAAATAGGAATTAAGTCTCATTTTACAAGATTTTAACATGCTGAAATACAAAATAAACACAACCTGGAATAGATCCTTAATTAGGAATTACGTCTCATATCCAAGATTTTAACATACATCAGAGCTGAAAATGTATCAGTGAGGAGTTCCTTTATGGATGTTGAGGCTTCGGAGATAGAGTGGGACAGGAAATCCCAGTATTTTATGCCCAAGCCAATTGATTCTTGAAGTGGTAAGTAGTTGAGCTAACCTTCTGCTATGAGAATGTTTTAGTGGAAATGTGGGCTGTCAGGACGGGGTGATGTGGAGATAGAAGCTATATAAGTTGGAACATGAAGCTTAATGTCTAGACTTAAATCCCGCGTGTTTAGAGGATTCAACAACATGACTGATTTCATTTTCAGGGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATAT</genome_strand>
        <mrna_strand>GAGGGGAA-AAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAAAGGTTGAAAGTCTTATTGCCCTTGTTACTAAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E440098" ref_strand="+" ref_description="SGN-E440098 [cSTA-15-A3]">
      <seq>gaaaaaagcttcaatttttactcccattttcttcttctgattgtttgttctttaatccaccatggaagccactgcttctttctcttcaactatggcttctcaccatttctttccactttctaaagccaccctttcaacttccaaacttaaccccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggttactataagaagggaaatgcgtggagttattagagctgagatgtttggacagctcactagtggacttgaaaatgcttggaacaagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31395" stop="30381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31074" g_stop="30876" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="226" r_length="198" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.73"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30681" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="352" r_length="126" r_score="0.858"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E440098" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>319</cumulative_length_of_scored_exons>
        <coverage percentage="0.906" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E440098" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31074" e_stop="30876"/>
          <exon e_start="30800" e_stop="30681"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGG------TAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTC</genome_strand>
        <mrna_strand>TTCTTCTTCTGATTGTTTGTTCTTTAATCC-ACCATGGAAGCCACTGCTTCTTTCTCTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCAACTTCCAAACTTAACCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTTACTATAAGAAGGGAAATGCGTGGAGTTATTAGAGCTGAGATGTTTGGACAGCTCACTAGTGGACTTGAAAATGCTTGGAACAAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E249520" ref_strand="+" ref_description="SGN-E249520 [cLEF-56-J17]">
      <seq>agaaaaaagcttcaatttttgcttcttctttggattgtgtgttctttaatcctaccatggaagccactgcttctttcacttcaactatggcttctcaccatttctttccactttctaaagccaccctttcatcttctaaacttaatcccacttgtaattcttcttcttcttggattggttctactcattctctttcattttcttcaagaaattcatttactagggatacatggagggtgatcaattccaagaatgtggtaagaaggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="31396" stop="30454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31096" g_stop="30876" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="221" r_length="221" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30800" g_stop="30754" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="268" r_length="47" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E249520" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>268</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31096" e_stop="30876"/>
          <exon e_start="30800" e_stop="30754"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTGTAAGACCCTTTTGGATTTTGGTTAGTTTTTTTTTTTTTTTGTAGTTTTTGGTTAAAGATTGAATTTTTATGTAGAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGA</genome_strand>
        <mrna_strand>AGAAAAAAGCTTCAATTTTTGCTTCTTCTTTGGATTGTGTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT...........................................................................AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E716405" ref_strand="+" ref_description="SGN-E716405 [FB16DH03]">
      <seq>cggtgatccctatatccagcagcaggagtttataaagttatggacgctgaaggaggcatatgttaaagcacttgggaagggtttctcatgtgcacctttcaagacgtttaccattcgtcttgggagctctactggagaacagtttcatccgtctcagaattcaagtgctgaggcgagtgaaatagtagtggattctcttgacaacacagagaaccttacaagtaattggcaatttatgctcctggagtttgctagttctcattatgttgccatttgcaccgaaaaggatgtcaatacaaaaggtgattgcgataataatccattgaaattaacagtttggaagacaattccatttgtcgaagatagttgtgtctctggaacagacacagttcttaaagtttgtggcttgagataatgattattacatccgcgatgatacttaatctgagaatctatcattatacattagaatccttggattcagagtagcaacttatattgcatccatcaattttatgctgggaaaacagattatacaagtgaatgaattctcattattttgcattcttgtctgtaagatggctagttttcttcatgattgtaaacattgcttctgtcacatatctttattttttttccacgagacgatgannnnnanaanaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="36601" stop="34209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36302" g_stop="36251" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36250" i_stop="35478" i_length="773">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35477" g_stop="35358" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="172" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35357" i_stop="35068" i_length="290">
            <donor d_prob="0.889" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35067" g_stop="34938" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="302" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34937" i_stop="34858" i_length="80">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34857" g_stop="34506" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="654" r_length="352" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="34505" i_stop="34285" i_length="221">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.975" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="34284" g_stop="34269" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="655" r_stop="670" r_length="16" r_score="0.438"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E716405" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716405" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36302" e_stop="36251"/>
          <exon e_start="35477" e_stop="35358"/>
          <exon e_start="35067" e_stop="34938"/>
          <exon e_start="34857" e_stop="34506"/>
          <exon e_start="34284" e_stop="34269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGATCCCTATATCCAGCAGCAGGAGTTTATAAAGTTATGGACGCTGAAGGTAAATTTACCTTTAGGTCCTTGATAATTGTTTCAAGTTTGTCTACTTGCTTACGGCTAATCATGCTTAGTTATTACAGTCATTTGCAATAAGACAACTTAAGAAATGAAGATTGTATAAGTCATGATTTAAGACTTGAAATGCATTTGATTTAGTATCCATCAATGCACGCCAAACATCAACCCCAATGTCCACTAGTGGATGCTATGCACTGTTGCCAATGCCAGCTTTGCAAGGCCAAAGAAAGCACTGCCAGCCACGAGAACTCAAGGTCAAACTCATTCATCTGTATGTACGTACATTACATACATGAGGCATTATAAATGTTGGAGTGGGTTAGAGTCCCACATTGTTTGGGAATTTGAACATAGGAAATCCTCCTCTCATGAGCTAGTTATTGGGGTTGAGTTAGTTCCATGTGTTATATCTTTATAGAGCTAGCTATATTCCTATTTGGGCTCCAGGTCCATGCTACAGTTGGGCCTGGGCATGAAGGGAGGGGGGAGGGGGGGGGGGGGTTAGTGGGTTAGAGACCCATGTGGGTTGGGGAATGGACTGATGTTTCGCTTATAGTGACTGGAGAGTTATAACTGATCCATAACTTGGTTTTATGCGTCATATCTGATCCACTTTCTTGGAACATGTTGTCTTCACTTCTTTATCAATAAAGACGGTCGTTTCACTGCTTTTATGCTATGTAAATGTGAAGGAGGAACATTATTTCCTTGTATTATATATTATGTAAGTTCTCTGAAGAAATATATCGTTCGCAGGAGGCATATGTTAAAGCACTTGGGAAGGGTTTCTCATGTGCACCTTTCAAGACGTTTACCATTCGTCTTGGGAGCTCTACTGGAGAACAGTTTCATCCGTCTCAGAATTCAAGTGCTGAGGTATGCCAGAACAGTTACTTTTTATTCAACTTTGACGTCTACATCAGAGGGGTCTATGTTGTATTCATTAGAGGTGCATCTTTCTATGGGCTTAGCCACGTTTTTAAGTAAAAAAGTAGTCAGGTTAAACCATTTGAGAAATAAATTCACTCTTAAGCCTTGTCCAAACAGAGCATTTCCTCGGTACTGTTTTTCTCTCGAGCAAGTGCTAGCTAGCATATAGAAGATATCATATTTTTAGATCAACGTCACACTGAATGTTTTTGTTGATACACATACTTTTCTTTCAGGCGAGTGAAATAGTAGTGGATTCTCTTGACAACACAGAGAACCTTACAAGTAATTGGCAATTTATGCTCCTGGAGTTTGCTAGTTCTCATTATGTTGCCATTTGCACCGAAAAGGATGTCAATACAAAAGGTAAGAAAAGTTCTTTTCTCCCCATGAAGTTGAGAATGTCGATAAAGAAGAGTTCTAAACATGTTTTGTGATTACCACAGGTGATTGCGATAATAATCCATTGAAATTAACAGTTTGGAAGACAATTCCATTTGTCGAAGATAGTTGTGTCTCTGGAACAGACACAGTTCTTAAAGTTTGTGGCTTGAGATAATGATTATTACATCCGCGATGATACTTAATCTGAGAATCTATCATTATACATTAGAATCCTTGGATTCAGAGTAGCAACTTATATTGCATCCATCAATTTTATGCTGGGAAAACAGATTATACAAGTGAATGAATTCTCATTATTTTGCATTCTTGTCTGTAAGATGGCTAGTTTTCTTCATGATTGTAAACATTGCTTCTGTCACATATCTTTATTTTTTTTCCACGAGACGATGAAAAATCATTTGTGCTAGTGTGGAGTGTCATTCAGTAGTATGAATGCTGCGCGACAACATTTAAGAGTTGGTGCTTAGACACATATAAGGATAGAATTGATAGTTGAGGCACTAGTATGGCAAAAAAGAGAACATACATCATAATCAATAAACATTTTGTAGAATGATGGTATTAGTTCTTTGTTTATTTTAGCCAAATATGTAACTGTTTTTTTTCGAATTCAGCTCCAGTACATCAAAA</genome_strand>
        <mrna_strand>CGGTGATCCCTATATCCAGCAGCAGGAGTTTATAAAGTTATGGACGCTGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCATATGTTAAAGCACTTGGGAAGGGTTTCTCATGTGCACCTTTCAAGACGTTTACCATTCGTCTTGGGAGCTCTACTGGAGAACAGTTTCATCCGTCTCAGAATTCAAGTGCTGAG..................................................................................................................................................................................................................................................................................................GCGAGTGAAATAGTAGTGGATTCTCTTGACAACACAGAGAACCTTACAAGTAATTGGCAATTTATGCTCCTGGAGTTTGCTAGTTCTCATTATGTTGCCATTTGCACCGAAAAGGATGTCAATACAAAAG................................................................................GTGATTGCGATAATAATCCATTGAAATTAACAGTTTGGAAGACAATTCCATTTGTCGAAGATAGTTGTGTCTCTGGAACAGACACAGTTCTTAAAGTTTGTGGCTTGAGATAATGATTATTACATCCGCGATGATACTTAATCTGAGAATCTATCATTATACATTAGAATCCTTGGATTCAGAGTAGCAACTTATATTGCATCCATCAATTTTATGCTGGGAAAACAGATTATACAAGTGAATGAATTCTCATTATTTTGCATTCTTGTCTGTAAGATGGCTAGTTTTCTTCATGATTGTAAACATTGCTTCTGTCACATATCTTTATTTTTTTTCCACGAGACGATGANNN.............................................................................................................................................................................................................................NNANAANAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E540875" ref_strand="+" ref_description="SGN-E540875 [TUS-61-G2]">
      <seq>cgggcccccctcgagtttttttttttttttttttatgtcaaattgaagaaaatcatattgaaattggaaaccaaaacaatattcattctaaaaaaaaaaaaacataaattacattcatcctgctagtttccccagccaaacatgactagagagaaaggtgacagaattcctgttgaactactaagaaagtaaccaatatccaagcacaaacataactggataatacattgtcttcttcttttttttccaaacataaatcacaaccatttaacttcttgatgaggtagcaacaatagccccttgaggcgagacgttgttcatcgccatgcttccaccctttctgttgtcgaattcaacctatcgatgattctgactcctttgcccttctctaaactaccagatatgtgacctattggccattcaatcattttctttgatcctttcagactagaactgctcgaatgcacgcttttagtccttcggatttttggttgacttcttccacttgtagaattgatgttaccagatccaagctcatcatcctttgtgctgtctggtaggtttgagatttcactgagacaatcaacgaacgcatctttctgaagaacgttctctatggtacatggtaatccatgggatttattctcaactattatctctctgagggcagaattagcagcgccacttgagggtcgttctttggatataaggatatcctcctcgatctcgttagacttctgaactattggttgtgaagcactatgatgtccattttcatcgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="1839" stop="41755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39485" g_stop="39512" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="0.571"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39513" i_stop="40701" i_length="1189">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40702" g_stop="41455" g_length="754"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="782" r_length="754" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E540875" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39485" e_stop="39512"/>
          <exon e_start="40702" e_stop="41455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTCCTTTTTCACTTTTTTATTATTTGTTTGCTTTTACACCGTAGAACTATCTATTCAAAAATCAATTTTTAATCTTTTCTAGAGTTATCTCACGAATCTATAATTAATTATAGTGAATAATTGTTATTTGCTTTTCGAAATTTCAACTTTTGAAGATAGCAATGATCACAATAAAACTAGTAAAATATATATTTTAGGTGCAAAAATATTAACGGTGAGTTTAATAATTTTTTCTCACTTAAAATAGTATTCTAGATTATAATAAAATGTTTGAAATTTATATTTTAAAATTATTATCTTTTATTAACAGTATTTTAGAACTTTAAAATAAATTACTAACTCTTCATATAATCAAAATAAGTTTTAGAATAACAATATCTAAGGTAATGTTTTCAAACATGACAAATATCTCTTTAACATAATTTGTGTTTTGTGATTTTTAAGATCGTTAACCTCTATAAATTTTGGAACCCACAAGTCAGGAATCCTGGCTCCGCCTCTGATTGGGAGGGCTTGAAAATATCATTTAGTATTTACTTGGCTGAGATTTGAACCTGATACGATTTTTTAAAAAAATATTCAAAGATTTAATGTAAAAAACATACCTCAATTTTCATTGTTTCACGAGTTTTATGTTTCTCTACCTAAACTATGTGTCACTTAGTATTTGAACATACTTCAATGTTGAATTGATCCTAATATCGAAAATAGTTGCGTGTAGAACAACTCAATATCAAAATGTATTTTAATATAAAGTAAGTGATAATTAAGATATGACACTCAACGCATGTGAAAAAGCGAATAGGTGACAGTTTATGTATCATTTTTACCACTATTATATTTGTTTGGATATTTTTATGAAGAAATATTAAATTTCGAAACGTAATGCATAATGCTACTTTTTCAATAACAAGAAAAAATAATCCAACAACCAAATTTAACTTAATTTAATATACTATATTATGATTAAACTCACTCAATTGAAAAATCTAATGTGTAATGCAAATTAGTTTTATTTTATTCACTTGATTATATTATAATTAAACTCACTCAATTGAAAAATCTAATGTGTAATGCAAATTAGTTTTATTTTATTCACTTGATTTTTAATATTCACTTAAAAGCTATACTAAATAATATGTTCATGAATTCAAACTCAAAAGCGAAACTTGGTTAAGAATGAAGGAGTGTAAGTTGAAAACACTAGTAATCACTTGTTTATGTCAAATTGAAGAAAATCATATTGAAATTGGAAACCAAAACAATATTCATTCTAAAAAAAAAAAAACATAAATTACATTCATCCTGCTAGTTTCCCCAGCCAAACATGACTAGAGAGAAAGGTGACAGAATTCCTGTTGAACTACTAAGAAAGTAACCAATATCCAAGCACAAACATAACTGGATAATACATTGTCTTCTTCTTTTTTTTCCAAACATAAATCACAACCATTTAACTTCTTGATGAGGTAGCAACAATAGCCCCTTGAGGCGAGACGTTGTTCATCGCCATGCTTCCACCCTTTCTGTTGTCGAATTCAACCTATCGATGATTCTGACTCCTTTGCCCTTCTCTAAACTACCAGATATGTGACCTATTGGCCATTCAATCATTTTCTTTGATCCTTTCAGACTAGAACTGCTCGAATGCACGCTTTTAGTCCTTCGGATTTTTGGTTGACTTCTTCCACTTGTAGAATTGATGTTACCAGATCCAAGCTCATCATCCTTTGTGCTGTCTGGTAGGTTTGAGATTTCACTGAGACAATCAACGAACGCATCTTTCTGAAGAACGTTCTCTATGGTACATGGTAATCCATGGGATTTATTCTCAACTATTATCTCTCTGAGGGCAGAATTAGCAGCGCCACTTGAGGGTCGTTCTTTGGATATAAGGATATCCTCCTCGATCTCGTTAGACTTCTGAACTATTGGTTGTGAAGCACTATGATGTCCATTTTCATCGAA</genome_strand>
        <mrna_strand>CGGGCCCCCCTCGAGTTTTTTTTTTTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTATGTCAAATTGAAGAAAATCATATTGAAATTGGAAACCAAAACAATATTCATTCTAAAAAAAAAAAAACATAAATTACATTCATCCTGCTAGTTTCCCCAGCCAAACATGACTAGAGAGAAAGGTGACAGAATTCCTGTTGAACTACTAAGAAAGTAACCAATATCCAAGCACAAACATAACTGGATAATACATTGTCTTCTTCTTTTTTTTCCAAACATAAATCACAACCATTTAACTTCTTGATGAGGTAGCAACAATAGCCCCTTGAGGCGAGACGTTGTTCATCGCCATGCTTCCACCCTTTCTGTTGTCGAATTCAACCTATCGATGATTCTGACTCCTTTGCCCTTCTCTAAACTACCAGATATGTGACCTATTGGCCATTCAATCATTTTCTTTGATCCTTTCAGACTAGAACTGCTCGAATGCACGCTTTTAGTCCTTCGGATTTTTGGTTGACTTCTTCCACTTGTAGAATTGATGTTACCAGATCCAAGCTCATCATCCTTTGTGCTGTCTGGTAGGTTTGAGATTTCACTGAGACAATCAACGAACGCATCTTTCTGAAGAACGTTCTCTATGGTACATGGTAATCCATGGGATTTATTCTCAACTATTATCTCTCTGAGGGCAGAATTAGCAGCGCCACTTGAGGGTCGTTCTTTGGATATAAGGATATCCTCCTCGATCTCGTTAGACTTCTGAACTATTGGTTGTGAAGCACTATGATGTCCATTTTCATCGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E418104" ref_strand="+" ref_description="SGN-E418104 [STM-26-L10]">
      <seq>antacatatatggaggncaaaatgaagaaaataccttgaaattggaaaccacaacaatattcattctaccaaaaaaaagaacacataaattacattcatcctgctagtttccccagccaaacatgcctagagggaaaggtgacagaattcatgtttgaactactaagaaagtaaccaatatccaagcacaaacataactggataatacattgtctttttttcaaacataaatcacaaccatttaacttcttgatgaggtagcaacatggctcgttgaggcgagagacgtgttcatcgccatgcttccaccctttctgttgtcgaattcaacctatcgatgattctgacccccttgcctttctctaaatttccagctacatgacctattggccattcaatcattttctttgatcctttcagactagaactactcgaatgcacgcttttagtccttcggatttttggttgacttcttccacttgttgaattgatgttaccagatccaagctcatcctttgtgctgtctggcaggtatgagatttcactgagacaatcaacgaacgcatcttcctgaagaacgttctctatggtacacggtaatccatgggatttattctcaactattatctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="40395" stop="41634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40693" g_stop="41334" g_length="642"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="632" r_length="632" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E418104" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E418104" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40693" e_stop="41334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAATCACTTGTTTATGTCAAATTGAAGAAAATCATATTGAAATTGGAAACCAAAACAATATTCATTCTA--AAAAAAAA-AAAACATAAATTACATTCATCCTGCTAGTTTCCCCAGCCAAACATGACTAGAGAGAAAGGTGACAGAATTCCTG-TTGAACTACTAAGAAAGTAACCAATATCCAAGCACAAACATAACTGGATAATACATTGTCTTCTTCTTTTTTTTCCAAACATAAATCACAACCATTTAACTTCTTGATGAGGTAGCAACAATAGCCCCTTGAGGCGAGA-CGTTGTTCATCGCCATGCTTCCACCCTTTCTGTTGTCGAATTCAACCTATCGATGATTCTGACTCCTTTGCCCTTCTCTAAACTACCAGATATGTGACCTATTGGCCATTCAATCATTTTCTTTGATCCTTTCAGACTAGAACTGCTCGAATGCACGCTTTTAGTCCTTCGGATTTTTGGTTGACTTCTTCCACTTGTAGAATTGATGTTACCAGATCCAAGCTCATCATCCTTTGTGCTGTCTGGTAGGTTTGAGATTTCACTGAGACAATCAACGAACGCATCTTTCTGAAGAACGTTCTCTATGGTACATGGTAATCCATGGGATTTATTCTCAACTATTATCTCTC</genome_strand>
        <mrna_strand>ANT-A-CATATATGGAGGNCAAAATGAAGAAAAT-ACCTTGAAATTGGAAACCACAACAATATTCATTCTACCAAAAAAAAGAACACATAAATTACATTCATCCTGCTAGTTTCCCCAGCCAAACATGCCTAGAGGGAAAGGTGACAGAATTCATGTTTGAACTACTAAGAAAGTAACCAATATCCAAGCACAAACATAACTGGATAATACATTG------TC-TTTTTTT-CAAACATAAATCACAACCATTTAACTTCTTGATGAGGTAGCAAC-ATGGCTCGTTGAGGCGAGAGACGTGTTCATCGCCATGCTTCCACCCTTTCTGTTGTCGAATTCAACCTATCGATGATTCTGACCCCCTTGCCTTTCTCTAAATTTCCAGCTACATGACCTATTGGCCATTCAATCATTTTCTTTGATCCTTTCAGACTAGAACTACTCGAATGCACGCTTTTAGTCCTTCGGATTTTTGGTTGACTTCTTCCACTTGTTGAATTGATGTTACCAGATCCAAG--C-TCATCCTTTGTGCTGTCTGGCAGGTATGAGATTTCACTGAGACAATCAACGAACGCATCTTCCTGAAGAACGTTCTCTATGGTACACGGTAATCCATGGGATTTATTCTCAACTATTATCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E613051" ref_strand="+" ref_description="SGN-E613051 [62821]">
      <seq>tgaaaatggaaaccacaacaatattcattctaccagaaaaaagaacacataaattacattcatcctgctagtttccccagccaaacatgcctagagggaaaggtgacagaattcctgtttgaactactaagaaagtaaccaatatccaagcacaaacataactggataatacattgtctttttttcaaacataaatcacaaccattcaacatcttgatgaggtagcaacaatgactcgttgaggcgagagacgtgttcatcgccatgcttctaccctttctgtttgtcgaactcaacctatcgatgattctgacccccttgcctttctctaaatttccagctacatgacctattggccattcaatcattttctttgatcctttcagactagaactactcgaatgcacgcttttagtccttcgtatttttggctgacttcttccacttgttgaattgatgttaccagatccaagctcatcctttgtgctgtctggcaggtttgagatttcactgagacaatcaacgaacgcaatcttcctgaagaacgttctctatggtacacggtaatccatgggattattctcaaatactatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="40432" stop="41631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40732" g_stop="41331" g_length="600"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="595" r_length="595" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E613051" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E613051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40732" e_stop="41331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATTGGAAACCAAAACAATATTCATTCTA--A-AAAAAAAAAAACATAAATTACATTCATCCTGCTAGTTTCCCCAGCCAAACATGACTAGAGAGAAAGGTGACAGAATTCCTG-TTGAACTACTAAGAAAGTAACCAATATCCAAGCACAAACATAACTGGATAATACATTGTCTTCTTCTTTTTTTTCCAAACATAAATCACAACCATTTAACTTCTTGATGAGGTAGCAACAATAGCCCCTTGAGGCGAGA-CGTTGTTCATCGCCATGCTTCCACCCTTTCTG-TTGTCGAATTCAACCTATCGATGATTCTGACTCCTTTGCCCTTCTCTAAACTACCAGATATGTGACCTATTGGCCATTCAATCATTTTCTTTGATCCTTTCAGACTAGAACTGCTCGAATGCACGCTTTTAGTCCTTCGGATTTTTGGTTGACTTCTTCCACTTGTAGAATTGATGTTACCAGATCCAAGCTCATCATCCTTTGTGCTGTCTGGTAGGTTTGAGATTTCACTGAGACAATCAACGAACGC-ATCTTTCTGAAGAACGTTCTCTATGGTACATGGTAATCCATGGGATTTATTCTCAACTATTATCT</genome_strand>
        <mrna_strand>TGAAAATGGAAACCACAACAATATTCATTCTACCAGAAAAAAGAACACATAAATTACATTCATCCTGCTAGTTTCCCCAGCCAAACATGCCTAGAGGGAAAGGTGACAGAATTCCTGTTTGAACTACTAAGAAAGTAACCAATATCCAAGCACAAACATAACTGGATAATACATTG------TC-TTTTTTT-CAAACATAAATCACAACCATTCAACATCTTGATGAGGTAGCAACAATGACTCGTTGAGGCGAGAGACGTGTTCATCGCCATGCTTCTACCCTTTCTGTTTGTCGAACTCAACCTATCGATGATTCTGACCCCCTTGCCTTTCTCTAAATTTCCAGCTACATGACCTATTGGCCATTCAATCATTTTCTTTGATCCTTTCAGACTAGAACTACTCGAATGCACGCTTTTAGTCCTTCGTATTTTTGGCTGACTTCTTCCACTTGTTGAATTGATGTTACCAGATCCAAG--C-TCATCCTTTGTGCTGTCTGGCAGGTTTGAGATTTCACTGAGACAATCAACGAACGCAATCTTCCTGAAGAACGTTCTCTATGGTACACGGTAATCCATGGGA-TTATTCTCAAATACTATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E423937" ref_strand="-" ref_description="SGN-E423937 [STM-42-F8]">
      <seq>gaaaatggacatcatagtgcttcacagccaatagttcagaagtctaacgagatcgaggaggatatccttatatccaaaggacgaccctcaagtggcgctgctaattctaccctcagagagatagtagttgagaataaatcccatggattaccgtgtaccatagagaacgttcttcaggaagatgcgttcgttgattgtctcagtgaaatctcaaacctgccagacagcacaaaggatgagcttggatctggtaacatcaattcaacaagtggaagaagtcagccaaaaatacgaaggactaaaagcgtgcattcgagtagttctagtctgaaaggatcaaagaaaatgattgaatggccaataggtcatgtagctggaaatttagagaaaggcaagggggtcagaatcatcgataggttgagttcgacaacagaaagggtagaagcatggcgatgaacacgtctctcgcctcaacgagtcattgttgctacctcatcaagatgttgaatggttgtgatttatgtttgaaaaaaagacaatgtattatccagttatgtttgtgcttggatattggttactttcttagtagttcaaacaggaattctgtcacctttccctctaggcatgtttggctggggaaactagcaggatgaatgtaatttatgtgttcttttaactggtagaatgaaaacaaaaaaaaagtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="41749" stop="40467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41449" g_stop="40786" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="688" polyA_stop="701"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E423937" ref_strand="-">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423937" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="41449" e_stop="40786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTTAGAGAAGGGCAAAGGAGTCAGAATCATCGATAGGTTGAATTCGACAACAGAAAGGGTGGAAGCATGGCGATGAACA-ACGTCTCGCCTCAAGGGGCTATTGTTGCTACCTCATCAAGAAGTTAAATGGTTGTGATTTATGTTTGGAAAAAAAAGAAGAAGACAATGTATTATCCAGTTATGTTTGTGCTTGGATATTGGTTACTTTCTTAGTAGTTC-AACAGGAATTCTGTCACCTTTCTCTCTAGTCATGTTTGGCTGGGGAAACTAGCAGGATGAAT</genome_strand>
        <mrna_strand>GAAAATGGACATCATAGTGCTTCACAGCCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGGACGACCCTCAAGTGGCGCTGCTAATTCTACCCTCAGAGAGATAGTAGTTGAGAATAAATCCCATGGATTACCGTGTACCATAGAGAACGTTCTTCAGGAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTGCCAGACAGCACAAA-G--GATGAGCTTGGATCTGGTAACATCAATTCAACAAGTGGAAGAAGTCAGCCAAAAATACGAAGGACTAAAAGCGTGCATTCGAGTAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCATGTAGCTGGAAATTTAGAGAAAGGCAAGGGGGTCAGAATCATCGATAGGTTGAGTTCGACAACAGAAAGGGTAGAAGCATGGCGATGAACACGTCTCTCGCCTCAACGAGTCATTGTTGCTACCTCATCAAGATGTTGAATGGTTGTGATTTATGTTT-G-----AAA-AA-AAGACAATGTATTATCCAGTTATGTTTGTGCTTGGATATTGGTTACTTTCTTAGTAGTTCAAACAGGAATTCTGTCACCTTTCCCTCTAGGCATGTTTGGCTGGGGAAACTAGCAGGATGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E540877" ref_strand="+" ref_description="SGN-E540877 [TUS-61-G2]">
      <seq>ggtgtttgctccaaatatgacacagatggcagatccgttgactgctttgatgtatgcagttcaagttatgaactttctcaaaactcttattctccggactttgaaagaccgagaagaaactgttgtagaagctggtcctgcaccagaactggagcctttcgatgaaaatggacatcatagtgcttcacaaccaatagttcagaagtctaacgagatcgaggaggatatccttatatccaaagaacgaccctcaagtggcgctgctaattctgccctcagagagataatagttgagaataaatcccatggattaccatgtaccatagagaacgttcttcagaaagatgcgttcgttgattgtctcagtgaaatctcaaacctaccagacagcacaaaggatgatgagcttggatctggtaacatcaattctacaagtggaagaagtcaaccaaaaatccgaaggactaaaagcgtgcattcgagcagttctagtctgaaaggatcaaagaaaatgattgaatggccaataggtcacatatctggtagtttagagaagggcaaaggagtcagaatcatcgataggttgaattcgacaacagaaagggtggaagcatggcgatgaacaacgtctcgcctncaggggctattgttgctacctcatcaagaagttaaatggntgtgatttatgtttggaaaaaaaagaagaagacnatgtattatccagttatgtttgtgcttggatattggttactttctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="42191" stop="40555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41891" g_stop="41867" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41866" i_stop="41588" i_length="279">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41587" g_stop="40855" g_length="733"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="758" r_length="733" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E540877" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41891" e_stop="41867"/>
          <exon e_start="41587" e_stop="40855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTTAGGAAAGTTGTCGTGGTTGTGATATTTCCTATATGAAAGGAGTGCAATTTCCATTTCATAGACAGCAACCTAAACGTGTCAATGAAACTAATACAATAGCTCAATCATTAGTCAGCAAGTGTTTTCTTGATTAACAGATGGTGCAACTTCTTTTTCCTGCAGATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTTAGAGAAGGGCAAAGGAGTCAGAATCATCGATAGGTTGAATTCGACAACAGAAAGGGTGGAAGCATGGCGATGAACAACGTCTCGCCTCAAGGGGCTATTGTTGCTACCTCATCAAGAAGTTAAATGGTTGTGATTTATGTTTGGAAAAAAAAGAAGAAGACAATGTATTATCCAGTTATGTTTGTGCTTGGATATTGGTTACTTTCTTA</genome_strand>
        <mrna_strand>GGTGTTTGCTCCAAATATGACACAG.......................................................................................................................................................................................................................................................................................ATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTTAGAGAAGGGCAAAGGAGTCAGAATCATCGATAGGTTGAATTCGACAACAGAAAGGGTGGAAGCATGGCGATGAACAACGTCTCGCCTNCAGGGGCTATTGTTGCTACCTCATCAAGAAGTTAAATGGNTGTGATTTATGTTTGGAAAAAAAAGAAGAAGACNATGTATTATCCAGTTATGTTTGTGCTTGGATATTGGTTACTTTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E451369" ref_strand="+" ref_description="SGN-E451369 [cSTS-12-D19]">
      <seq>gttttaacaagatgaatgcacgtaatattgctatggtgtttgctccaaatatgacacagatggcagatccgttgactgctttgatgtatgcagttcaagttatgaacttcctcaaaactctaattctccggactttgaaagaccgagaagaaactgttgtagaagctggtcctgcaccagaattggaaccattcgatgaaaatggacatcatagtgcttcacagccaatagttcagaagtctaacgagatcgaggaggatatccttatatccaaaggacgaccctcaagtggcgctgctaattctaccctcagagagatagtagttgagaataaatcccatggattaccgtgtaccatagagaacgttcttcaggaagatgcgttcgttgattgtctcagtgaaatctcaaacctgccagacagcacaaaggatgagcttggatctggtaacatcaattcaacaagtggaagaagtcagccaaaaatacgaaggactaaaagcgtgcattcgagtagttctagtctgaaaggatcaaagaaaatgattgaatggccaataggtcatgtagctggaaatttagagaaaggcaagggggtcagaatncatcgataggttgagttcgacaacagaaagggtagaagcatggcgatgaacacgtctctcgcctcaacgagtcattgttgctacctcatcaagatgttgaatggttgtgatttatgtttgaaaaaagaacatgtattatccagttatgtttgtgcttggatattggttactttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="42225" stop="40558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41925" g_stop="41867" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41866" i_stop="41588" i_length="279">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41587" g_stop="40858" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="779" r_length="720" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E451369" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451369" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41925" e_stop="41867"/>
          <exon e_start="41587" e_stop="40858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTTAGGAAAGTTGTCGTGGTTGTGATATTTCCTATATGAAAGGAGTGCAATTTCCATTTCATAGACAGCAACCTAAACGTGTCAATGAAACTAATACAATAGCTCAATCATTAGTCAGCAAGTGTTTTCTTGATTAACAGATGGTGCAACTTCTTTTTCCTGCAGATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTTAGAGAAGGGCAAAGGAGTCAGAAT-CATCGATAGGTTGAATTCGACAACAGAAAGGGTGGAAGCATGGCGATGAACA-ACGTCTCGCCTCAAGGGGCTATTGTTGCTACCTCATCAAGAAGTTAAATGGTTGTGATTTATGTTTGGAAAAAAAAGAAGAAGACAATGTATTATCCAGTTATGTTTGTGCTTGGATATTGGTTACTTTC</genome_strand>
        <mrna_strand>GTTTTAACAAGATGAATGCACGTAATATTGCTATGGTGTTTGCTCCAAATATGACACAG.......................................................................................................................................................................................................................................................................................ATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTCCTCAAAACTCTAATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAATTGGAACCATTCGATGAAAATGGACATCATAGTGCTTCACAGCCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGGACGACCCTCAAGTGGCGCTGCTAATTCTACCCTCAGAGAGATAGTAGTTGAGAATAAATCCCATGGATTACCGTGTACCATAGAGAACGTTCTTCAGGAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTGCCAGACAGCACAAA-G--GATGAGCTTGGATCTGGTAACATCAATTCAACAAGTGGAAGAAGTCAGCCAAAAATACGAAGGACTAAAAGCGTGCATTCGAGTAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCATGTAGCTGGAAATTTAGAGAAAGGCAAGGGGGTCAGAATNCATCGATAGGTTGAGTTCGACAACAGAAAGGGTAGAAGCATGGCGATGAACACGTCTCTCGCCTCAACGAGTCATTGTTGCTACCTCATCAAGATGTTGAATGGTTGTGATTTATGTTT-G----AAAA-AAG-A-AC-ATGTATTATCCAGTTATGTTTGTGCTTGGATATTGGTTACTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E553355" ref_strand="+" ref_description="SGN-E553355 [cTSB-5-D20]">
      <seq>ttgacgtccattgcttagcaggtcttataaaggcttggttcagagagttgccaacgggagttttggattctctctcgccagaggaaattatgcgtgctcaatcggaagaagagtgtgtgcggctcgtgagacttcttcctccaactgaagctgctctattagattgggctattaacttgatggctgatgttgctcaactggaaagttttaacaaaatgaatgcacgtaatatcgctatggtgtttgctccaaatatgacacagatggcagatccgttgactgctttgatgtatgcagttcaagttatgaactttctcaaaactcttattctccggactttgaaagaccgagaagaaactgttgtagaagctggtcctgcaccagaactggagcctttcgatgaaaatggacatcatagtgcttcacaaccaatagttcagaagtctaacgagatcgaggaggatatccttatatccaaagaacgaccctcaagtggcgctgctaattctgccctcagagagataatagttgagaataaatcccatggattaccatgtaccatagagaacgttcttcagaaagatgcgttcgttgattgtctcagtgaaatctcaaacctaccagacagcacaaaggatgatgagcttggatctggtaacatcaattctacaagtggaagaagtcaaccaaaaatccgaaggactaaaagcgtgcattcgagcagttctagtctgaaaggatcaaagaaaatgattgaatggccaataggtcacatatctggtagtttagagaagggcaaaggagtcagaatcatcgataggttgaattcgacaacagaaagggtggaagcatggcgatgaacaacgtctcgcctcaaggggcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="42944" stop="40667"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42644" g_stop="42613" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42612" i_stop="42098" i_length="515">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42097" g_stop="41867" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="263" r_length="231" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41866" i_stop="41588" i_length="279">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41587" g_stop="40967" g_length="621"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="884" r_length="621" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E553355" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>884</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42644" e_stop="42613"/>
          <exon e_start="42097" e_stop="41867"/>
          <exon e_start="41587" e_stop="40967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACGTCCATTGCTTAGCAGGTCTTATAAAGGTGATATTCTGCACCTTGCTCTCGGAATATGTTTCATTCTATGTTGCTCAGCCTCTCCAAAAATGCTGCCGGTCCCGTTCAGATCCTCCAAAAAAGCACTACTTTTAGAGGATCTGACACACACTTGCGATATTTTTGAAGAGTCAGGGCGACATAGATTCCATTTGACATTTTTAGGTAATTGTTGAGAGGAAATTATTTACTCGGATTGCAAGTTATCAATATCTTCCCGTATCAGCTTTTGAGGCGAAATTTCTCATTTTGGAGGAAGTATACTTCCTCAAAATTGCATCTGAACTTGAACTAAAATTTCTTATCTTCTTCATTGATGAAGAAGGTACATTGTTATGTTCTGATCAAGTTCAAAGAGTTCTTTCTCCTCTCCCTATATGGACAGCAGTAGGAGATGGTTCTATTGACATCAATATTTGTTTTCCTTATGCATTTTATGATTGTTTTGATTTTTCATTATATCTGTATATGGTAATTGACGTAGAGTGATGATATTTTTATAGGCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTTAGGAAAGTTGTCGTGGTTGTGATATTTCCTATATGAAAGGAGTGCAATTTCCATTTCATAGACAGCAACCTAAACGTGTCAATGAAACTAATACAATAGCTCAATCATTAGTCAGCAAGTGTTTTCTTGATTAACAGATGGTGCAACTTCTTTTTCCTGCAGATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTTAGAGAAGGGCAAAGGAGTCAGAATCATCGATAGGTTGAATTCGACAACAGAAAGGGTGGAAGCATGGCGATGAACAACGTCTCGCCTCAAGGGGCTA</genome_strand>
        <mrna_strand>TTGACGTCCATTGCTTAGCAGGTCTTATAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAG.......................................................................................................................................................................................................................................................................................ATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTTAGAGAAGGGCAAAGGAGTCAGAATCATCGATAGGTTGAATTCGACAACAGAAAGGGTGGAAGCATGGCGATGAACAACGTCTCGCCTCAAGGGGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E553250" ref_strand="+" ref_description="SGN-E553250 [cTSB-3-I22]">
      <seq>ttgacgtccattgcttagcaggtcttataaaggcttggttcagagagttgccaacgggagttttggattctctctcgccagaggaaattatgcgtgctcaatcggaagaagagtgtgtgcggctcgtgagacttcttcctccaactgaagctgctctattagattgggctattaacttgatggctgatgttgctcaactggaaagttttaacaaaatgaatgcacgtaatatcgctatggtgtttgctccaaatatgacacagatggcagatccgttgactgctttgatgtatgcagttcaagttatgaactttctcaaaactcttattctccggactttgaaagaccgagaagaaactgttgtagaagctggtcctgcaccagaactggagcctttcgatgaaaatggacatcatagtgcttcacaaccaatagttcagaagtctaacgagatcgaggaggatatccttatatccaaagaacgaccctcaagtggcgctgctaattctgccctcagagagataatagttgagaataaatcccatggattaccatgtaccatagagaacgttcttcagaaagatgcgttcgttgattgtctcagtgaaatctcaaacctaccagacagcacaaaggatgatgagcttggatctggtaacatcaattctacaagtggaagaagtcaaccaaaaatccgaaggactaaaagcgtgcattcgagcagttctagtctgaaaggatcaaagaaaatgattgaatggccaataggtcacatatctggtagtttagaggaaggcaaaggagtcagaatcatcgataggttgaaattcgacaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="42944" stop="40716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42644" g_stop="42613" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42612" i_stop="42098" i_length="515">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42097" g_stop="41867" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="263" r_length="231" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41866" i_stop="41588" i_length="279">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41587" g_stop="41016" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="836" r_length="573" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E553250" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42644" e_stop="42613"/>
          <exon e_start="42097" e_stop="41867"/>
          <exon e_start="41587" e_stop="41016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACGTCCATTGCTTAGCAGGTCTTATAAAGGTGATATTCTGCACCTTGCTCTCGGAATATGTTTCATTCTATGTTGCTCAGCCTCTCCAAAAATGCTGCCGGTCCCGTTCAGATCCTCCAAAAAAGCACTACTTTTAGAGGATCTGACACACACTTGCGATATTTTTGAAGAGTCAGGGCGACATAGATTCCATTTGACATTTTTAGGTAATTGTTGAGAGGAAATTATTTACTCGGATTGCAAGTTATCAATATCTTCCCGTATCAGCTTTTGAGGCGAAATTTCTCATTTTGGAGGAAGTATACTTCCTCAAAATTGCATCTGAACTTGAACTAAAATTTCTTATCTTCTTCATTGATGAAGAAGGTACATTGTTATGTTCTGATCAAGTTCAAAGAGTTCTTTCTCCTCTCCCTATATGGACAGCAGTAGGAGATGGTTCTATTGACATCAATATTTGTTTTCCTTATGCATTTTATGATTGTTTTGATTTTTCATTATATCTGTATATGGTAATTGACGTAGAGTGATGATATTTTTATAGGCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTTAGGAAAGTTGTCGTGGTTGTGATATTTCCTATATGAAAGGAGTGCAATTTCCATTTCATAGACAGCAACCTAAACGTGTCAATGAAACTAATACAATAGCTCAATCATTAGTCAGCAAGTGTTTTCTTGATTAACAGATGGTGCAACTTCTTTTTCCTGCAGATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTTAGAGAAGGGCAAAGGAGTCAGAATCATCGATAGGTTG-AATTCGACAAC</genome_strand>
        <mrna_strand>TTGACGTCCATTGCTTAGCAGGTCTTATAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAG.......................................................................................................................................................................................................................................................................................ATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTTAGAGGAAGGCAAAGGAGTCAGAATCATCGATAGGTTGAAATTCGACAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E290732" ref_strand="+" ref_description="SGN-E290732 [cLET-10-B17]">
      <seq>gtgtttgctccaaatatgacacagatggcagatccgttgactgctttgatgtatgcagttcaagttatgaactttctcaaaactcttattctccggactttgaaagaccgagaagaaactgttgtagaagctggtcctgcaccagaactggagcctttcgatgaaaatggacatcatagtgcttcacaaccaatagttcagaagtctaacgagatcgaggaggatatccttatatccaaagaacgaccctcaagtggcgctgctaattctgccctcagagagataatagttgagaataaatcccatggattaccatgtaccatagagaacgttcttcagaaagatgcgttcgttgattgtctcagtgaaatctcaaacctaccagacagcacaaaggatgatgagcttggatctggtaacatcaattctacaagtggaagaagtcaaccaaaaatccgaaggactaaaagcgtgcattcgagcagttctagtctgaaaggatcaaagaaaatgattgaatggccaataggtcacatatctggtagttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="42190" stop="40764"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41890" g_stop="41867" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41866" i_stop="41588" i_length="279">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41587" g_stop="41064" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="548" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E290732" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41890" e_stop="41867"/>
          <exon e_start="41587" e_stop="41064"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTTAGGAAAGTTGTCGTGGTTGTGATATTTCCTATATGAAAGGAGTGCAATTTCCATTTCATAGACAGCAACCTAAACGTGTCAATGAAACTAATACAATAGCTCAATCATTAGTCAGCAAGTGTTTTCTTGATTAACAGATGGTGCAACTTCTTTTTCCTGCAGATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTT</genome_strand>
        <mrna_strand>GTGTTTGCTCCAAATATGACACAG.......................................................................................................................................................................................................................................................................................ATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E423936" ref_strand="+" ref_description="SGN-E423936 [STM-42-F8]">
      <seq>gttttaacaagatgaatgcacgtaatattgctatggtgtttgctccaaatatgacacagatggcagatccgttgactgctttgatgtatgcagttcaagttatgaacttcctcaaaactctaattctccggactttgaaagaccgagaagaaactgttgtagaagctggtcctgcaccagaattggaaccattcgatgaaaatggacatcatagtgcttcacagccaatagttcagaagtctaacgagatcgaggaggatatccttatatccaaaggacgaccctcaagtggcgctgctaattctaccctcagagagatagtagttgagaataaatcccatggattaccgtgtaccatagagaacgttcttcaggaagatgcgttcgttgattgtctcagtgaaatctcaaacctgccagacagcacaaaggatgagcttggatctggtaacatcaattcaacaagtggaagaagtcagccaaaaatacgaaggactaaaagcgtgcattcgagtagttctagtctgaaaggatcaaagaaaatgattgaatggccaataggtcatgtagctggaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="42225" stop="40765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41925" g_stop="41867" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41866" i_stop="41588" i_length="279">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41587" g_stop="41065" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="579" r_length="520" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E423936" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41925" e_stop="41867"/>
          <exon e_start="41587" e_stop="41065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTTAGGAAAGTTGTCGTGGTTGTGATATTTCCTATATGAAAGGAGTGCAATTTCCATTTCATAGACAGCAACCTAAACGTGTCAATGAAACTAATACAATAGCTCAATCATTAGTCAGCAAGTGTTTTCTTGATTAACAGATGGTGCAACTTCTTTTTCCTGCAGATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTT</genome_strand>
        <mrna_strand>GTTTTAACAAGATGAATGCACGTAATATTGCTATGGTGTTTGCTCCAAATATGACACAG.......................................................................................................................................................................................................................................................................................ATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTCCTCAAAACTCTAATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAATTGGAACCATTCGATGAAAATGGACATCATAGTGCTTCACAGCCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGGACGACCCTCAAGTGGCGCTGCTAATTCTACCCTCAGAGAGATAGTAGTTGAGAATAAATCCCATGGATTACCGTGTACCATAGAGAACGTTCTTCAGGAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTGCCAGACAGCACAAA-G--GATGAGCTTGGATCTGGTAACATCAATTCAACAAGTGGAAGAAGTCAGCCAAAAATACGAAGGACTAAAAGCGTGCATTCGAGTAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCATGTAGCTGGAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E621430" ref_strand="+" ref_description="SGN-E621430 [75176]">
      <seq>atgctgaaaatggccaagaagaattgtcagggagcagctaaataggggaattattccagataacattgacgtccattgcctagcaggtcttataaaggcttggttcagagagttaccaacgggagtttgggattctctctcgccagaggaaattatgcgttctcaatcggaagaagagtgtgtgcggctcgtgagacttcttcctccaactgaagctgctctattagattgggctattaacttgatggctgatgttgctcaactggaaagttttaacaagatgaatgcacgtaatattgctatggtgtttgctccaaatatgacacagatggcagatccgttgactgctttgatgtatgcagttcaagttatgaacttcctcaaaactctaattctccggactttgaaagaccgagaagaaactgttgtagaagctggtcctgcaccagaattggaaccattcgatgaaaatggacatcattagtgcttcacagccaatagttcagaagtctaacgagatcgaggaggatatccttatatccaaaggacgaacctcaagtggcgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="43010" stop="41050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42710" g_stop="42613" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42612" i_stop="42098" i_length="515">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42097" g_stop="41867" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="328" r_length="231" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41866" i_stop="41588" i_length="279">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41587" g_stop="41350" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="567" r_length="239" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E621430" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E621430" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42710" e_stop="42613"/>
          <exon e_start="42097" e_stop="41867"/>
          <exon e_start="41587" e_stop="41350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAATAGGGGGATTATTCCAGATAACATTGACGTCCATTGCTTAGCAGGTCTTATAAAGGTGATATTCTGCACCTTGCTCTCGGAATATGTTTCATTCTATGTTGCTCAGCCTCTCCAAAAATGCTGCCGGTCCCGTTCAGATCCTCCAAAAAAGCACTACTTTTAGAGGATCTGACACACACTTGCGATATTTTTGAAGAGTCAGGGCGACATAGATTCCATTTGACATTTTTAGGTAATTGTTGAGAGGAAATTATTTACTCGGATTGCAAGTTATCAATATCTTCCCGTATCAGCTTTTGAGGCGAAATTTCTCATTTTGGAGGAAGTATACTTCCTCAAAATTGCATCTGAACTTGAACTAAAATTTCTTATCTTCTTCATTGATGAAGAAGGTACATTGTTATGTTCTGATCAAGTTCAAAGAGTTCTTTCTCCTCTCCCTATATGGACAGCAGTAGGAGATGGTTCTATTGACATCAATATTTGTTTTCCTTATGCATTTTATGATTGTTTTGATTTTTCATTATATCTGTATATGGTAATTGACGTAGAGTGATGATATTTTTATAGGCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTTAGGAAAGTTGTCGTGGTTGTGATATTTCCTATATGAAAGGAGTGCAATTTCCATTTCATAGACAGCAACCTAAACGTGTCAATGAAACTAATACAATAGCTCAATCATTAGTCAGCAAGTGTTTTCTTGATTAACAGATGGTGCAACTTCTTTTTCCTGCAGATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCA-TAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTG</genome_strand>
        <mrna_strand>ATGCTGAAAATGGCCAAGAAGAA-TTGTCAGGGAGCAGCTAAATAGGGGAATTATTCCAGATAACATTGACGTCCATTGCCTAGCAGGTCTTATAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGTTCAGAGAGTTACCAACGGGAGTTTGGGATTCTCTCTCGCCAGAGGAAATTATGCGTTCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAGATGAATGCACGTAATATTGCTATGGTGTTTGCTCCAAATATGACACAG.......................................................................................................................................................................................................................................................................................ATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTCCTCAAAACTCTAATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAATTGGAACCATTCGATGAAAATGGACATCATTAGTGCTTCACAGCCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGGACGAACCTCAAGTGGCGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E621103" ref_strand="+" ref_description="SGN-E621103 [71810]">
      <seq>ctgaaaatgngcaagaagaatttgtcagggagcagctaaactaggggaattattccagataacattgacgtccattgcctagcaggtcttataaaggcttggttcagagagttaccaacgggagttttggattctctctcgccagaggaaattatgcgttctcaatcggaagaagagtgtgtgcggctcgtgagacttcttcctccaactgaagctgctctattagattgggctattaacttgatggctgatgttgctcaactggaaagttttaacaagatgaatgcacgtaatattgctatggtgtttgctccaaatatgacacagatggcagatccgttgactgctttgatgtatgcagttcaagttatgaacttcctcaaaactctaattctccggactttgaaagaccgagaagaaactgttgtagaagctggtcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="43007" stop="41173"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42707" g_stop="42613" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42612" i_stop="42098" i_length="515">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42097" g_stop="41867" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="327" r_length="231" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41866" i_stop="41588" i_length="279">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41587" g_stop="41473" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="442" r_length="115" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E621103" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E621103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42707" e_stop="42613"/>
          <exon e_start="42097" e_stop="41867"/>
          <exon e_start="41587" e_stop="41473"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAA-TAGGGGGATTATTCCAGATAACATTGACGTCCATTGCTTAGCAGGTCTTATAAAGGTGATATTCTGCACCTTGCTCTCGGAATATGTTTCATTCTATGTTGCTCAGCCTCTCCAAAAATGCTGCCGGTCCCGTTCAGATCCTCCAAAAAAGCACTACTTTTAGAGGATCTGACACACACTTGCGATATTTTTGAAGAGTCAGGGCGACATAGATTCCATTTGACATTTTTAGGTAATTGTTGAGAGGAAATTATTTACTCGGATTGCAAGTTATCAATATCTTCCCGTATCAGCTTTTGAGGCGAAATTTCTCATTTTGGAGGAAGTATACTTCCTCAAAATTGCATCTGAACTTGAACTAAAATTTCTTATCTTCTTCATTGATGAAGAAGGTACATTGTTATGTTCTGATCAAGTTCAAAGAGTTCTTTCTCCTCTCCCTATATGGACAGCAGTAGGAGATGGTTCTATTGACATCAATATTTGTTTTCCTTATGCATTTTATGATTGTTTTGATTTTTCATTATATCTGTATATGGTAATTGACGTAGAGTGATGATATTTTTATAGGCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTTAGGAAAGTTGTCGTGGTTGTGATATTTCCTATATGAAAGGAGTGCAATTTCCATTTCATAGACAGCAACCTAAACGTGTCAATGAAACTAATACAATAGCTCAATCATTAGTCAGCAAGTGTTTTCTTGATTAACAGATGGTGCAACTTCTTTTTCCTGCAGATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTG</genome_strand>
        <mrna_strand>CTGAAAATGNGCAAGAAGAATTTGTCAGGGAGCAGCTAAACTAGGGGAATTATTCCAGATAACATTGACGTCCATTGCCTAGCAGGTCTTATAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGTTCAGAGAGTTACCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTTCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAGATGAATGCACGTAATATTGCTATGGTGTTTGCTCCAAATATGACACAG.......................................................................................................................................................................................................................................................................................ATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTCCTCAAAACTCTAATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E333964" ref_strand="+" ref_description="SGN-E333964 [cTOD-24-P5]">
      <seq>tttcatttgactctcgaggaaatagtgtccccacaatccttctgatgatgcaagggcgcttatacgttcaaggtggcttgcaggctgaagggatcttcaggatcaatgccgaaaatggccaagaagaatttgtcagggagcagctaaatagggggattattccagataacattgacgtccattgcttagcaggtcttataaaggcttggttcagagagttgccaacgggagttttggattctctctcgccagaggaaattatgcgtgctcaatcggaagaagagtgtgtgcggctcgtgagacttcttcctccaactgaagctgctctattagattgggctattaacttgatggctgatgttgctcaactggaaagttttaacaaaatgaatgcacgtaatatcgctatggtgtttgctccaaatatgacacaggtaagtcaaaactttcatgcaatttaaaagaaggaatcatattgttgttcctataacgtctcttttcattttcttagtttcgggtgtgggtaagcgtttggggggttacagcttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="43254" stop="41450"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42954" g_stop="42872" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42871" i_stop="42733" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42732" g_stop="42613" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="203" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42612" i_stop="42098" i_length="515">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42097" g_stop="41750" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="551" r_length="348" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E333964" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E333964" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42954" e_stop="42872"/>
          <exon e_start="42732" e_stop="42613"/>
          <exon e_start="42097" e_stop="41750"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCATTTGACTCTCGAGGAAATAGTGTCCCCACAATCCTTCTGATGATGCAAGGGCGCTTATACGTTCAAGGTGGCTTGCAGGTGCGTATTCACCAACTCTTTAATCTCCCTCATGTAGATCAATTAAATGTTTGACTAGGCATCTATCACTGGTATGTGTGATCTCTAGAAGTTCGTAAGTATAACTTTTCAATGATGAAAATTAGTTATTCACTTGCAGGCTGAAGGGATCTTCAGGATCAATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAATAGGGGGATTATTCCAGATAACATTGACGTCCATTGCTTAGCAGGTCTTATAAAGGTGATATTCTGCACCTTGCTCTCGGAATATGTTTCATTCTATGTTGCTCAGCCTCTCCAAAAATGCTGCCGGTCCCGTTCAGATCCTCCAAAAAAGCACTACTTTTAGAGGATCTGACACACACTTGCGATATTTTTGAAGAGTCAGGGCGACATAGATTCCATTTGACATTTTTAGGTAATTGTTGAGAGGAAATTATTTACTCGGATTGCAAGTTATCAATATCTTCCCGTATCAGCTTTTGAGGCGAAATTTCTCATTTTGGAGGAAGTATACTTCCTCAAAATTGCATCTGAACTTGAACTAAAATTTCTTATCTTCTTCATTGATGAAGAAGGTACATTGTTATGTTCTGATCAAGTTCAAAGAGTTCTTTCTCCTCTCCCTATATGGACAGCAGTAGGAGATGGTTCTATTGACATCAATATTTGTTTTCCTTATGCATTTTATGATTGTTTTGATTTTTCATTATATCTGTATATGGTAATTGACGTAGAGTGATGATATTTTTATAGGCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTT</genome_strand>
        <mrna_strand>TTTCATTTGACTCTCGAGGAAATAGTGTCCCCACAATCCTTCTGATGATGCAAGGGCGCTTATACGTTCAAGGTGGCTTGCAG...........................................................................................................................................GCTGAAGGGATCTTCAGGATCAATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAATAGGGGGATTATTCCAGATAACATTGACGTCCATTGCTTAGCAGGTCTTATAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E207739" ref_strand="+" ref_description="SGN-E207739 [cLEC-32-C4]">
      <seq>tttcttggtcttcctgttgagtttgaacctgaagtacctagaagacccccaagtgccagtacaagagtctttggagtttcgacagattgcatgcagctttcatttgactctcgaggaaatagtgtccccacaatccttctgatgatgcaagggcgcttatacgttcaaggtggcttgcaggctgaagggatcttcaggatcaatgccgaaaatggccaagaagaatttgtcagggagcagctaaatagggggattattccagataacattgacgtccattgcttagcaggtcttataaaggcttggttcagagagttgccaacgggagttttggattctctctcgccagaggaaattatgcgtgctcaatcggaagaagagtgtgtgcggctcgtgagacttcttcctccaactgaagctgctctattagattgggctattaacttgatggctgatgttgctcaactggaaagttttaacaaaatgaatgcacgtaatatcgctatggtgtttgctccaaatatgacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="44930" stop="41569"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44630" g_stop="44572" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44571" i_stop="42993" i_length="1579">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42992" g_stop="42872" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="180" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42871" i_stop="42733" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42732" g_stop="42613" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="300" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42612" i_stop="42098" i_length="515">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42097" g_stop="41869" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="529" r_length="229" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E207739" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207739" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44630" e_stop="44572"/>
          <exon e_start="42992" e_stop="42872"/>
          <exon e_start="42732" e_stop="42613"/>
          <exon e_start="42097" e_stop="41869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTGGTCTTCCTGTTGAGTTTGAACCTGAAGTACCTAGAAGACCCCCAAGTGCCAGGTTTGATCTTGTTCTTTTCTTTTTTGTGAATTCGCGGGGTTTTCTAAGTAGAGATTCATATAGTCGACTCTAACTTGATTGGAACTGAGACGTAATTGTTGTTGTTTGTTCTAAATCATTCATGAGTTAGGATATGTGCTTGGTGTTACTTTATAACCATTATTATTCTTTTGTTTTTTTCCTTGTATGTGTTTCTAGTTTTGTTGTGTTCTGATGACATTTAATGTTCGAATGTTTCCGCTGTCCTAAGCTAGTTGTCATGTTTTGCTTTTCGAGAGTCAGCTTTGATCAATCTTTTGGACCTACACTGAATTAGTTTAATTTGATATTCGAAACCTATACTTACAAGTTGCAACTTTTCTCATATCAATATGGTGAAGAAATACATCTTAATATATTGGTTATAGTTCATGTAGTTTGAATCTCAAGAAGCAAAATATAACTACTATATATTTTGGGTCGGACGGAGTAGTAGGATATGATTTTGTGAAATTCCATAATTCATTATTATTGTTATTATTATTCAAGTTTTATCTTTTTGTTCTTTTCTCTTTATGGTGAGCTGAAAAAGGGCTGTTGGCTTCTTTTAGTTTAGTTGTTTGGGCTTTTGACAGCCTTGTCCAGCAAATGCTTATGGTAAGGAGAATATATAATTATGGTTTAAATTATTCGGAGAAAACTAAAATGCAGTGGAATGCATGAATAGTTGATTAATATATCTGTGAATTGATGTGTAATTGGTGTGTCCTTGTCTTCCTTACTAGACTATAATTAGATCGAAAGTAACATGTTCTTTTGCTTCAAGTTCAGATTTTCCTTTCTTCATGATGACTAGACTTACCAAAAATTGACTATTTTTATTTGGTTGGGGAATTTAAAAGCATATTGCTTATTCAGTAATGTAGAAATTTTATCACGTGTTGGCAATATATATGTTGTGTATGAAAATGGTTAAGAAAAGGGTGCAGAGAAACATAGTGAAAGCTTAGTATAATTACTCTTCTAATTAAGAAAGTTCTTTGAACATTTTGAAATGGTAGTTGCTTAGGAAATCCCGGGATAGATGAGCAAAAATTGAAGAAAATGAAGTATAGGCCTTTTAATTTTACCTTCTAGTTTCATATGTCCTCGAGCACTGTGGGAATATGTCATCCTTCAACATAGTAAAAGAAAATGAGAACTGTAAAAAAGAAAAGAAAAAGTTGGTTCTCTTTGTTTGGCAAACAAGCTGTTGCTTCATAATTGTTACAATAATAACTATGTTAACAGTCCAAAACAATTGGGGTAAGGCGATATGAATCCTCTATATCTTTCAACTTCCTATGTGCCTGTTTCATCTCAATACTTCTATTTCATAATTGTTAAAGTTGATACCGACCTAGTACTGAAAAGCTATATCATATATCATACATGTTTTGTGATGGCGTATTACTTTTGTGTAACTTCTTTTGTATCGTAGTAACTTCTGATCCTATCCTTTTTACGAGCTTTTATATGGTGTAGAACAACTTGTTCAGATTGTTGCCTAGTAAAAAAGTGTCACGCTCTTCTAATTGATATTGGTGTTGTTTTTTTGCAGTACAAGAGTCTTTGGAGTTTCGACAGATTGCATGCAGCTTTCATTTGACTCTCGAGGAAATAGTGTCCCCACAATCCTTCTGATGATGCAAGGGCGCTTATACGTTCAAGGTGGCTTGCAGGTGCGTATTCACCAACTCTTTAATCTCCCTCATGTAGATCAATTAAATGTTTGACTAGGCATCTATCACTGGTATGTGTGATCTCTAGAAGTTCGTAAGTATAACTTTTCAATGATGAAAATTAGTTATTCACTTGCAGGCTGAAGGGATCTTCAGGATCAATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAATAGGGGGATTATTCCAGATAACATTGACGTCCATTGCTTAGCAGGTCTTATAAAGGTGATATTCTGCACCTTGCTCTCGGAATATGTTTCATTCTATGTTGCTCAGCCTCTCCAAAAATGCTGCCGGTCCCGTTCAGATCCTCCAAAAAAGCACTACTTTTAGAGGATCTGACACACACTTGCGATATTTTTGAAGAGTCAGGGCGACATAGATTCCATTTGACATTTTTAGGTAATTGTTGAGAGGAAATTATTTACTCGGATTGCAAGTTATCAATATCTTCCCGTATCAGCTTTTGAGGCGAAATTTCTCATTTTGGAGGAAGTATACTTCCTCAAAATTGCATCTGAACTTGAACTAAAATTTCTTATCTTCTTCATTGATGAAGAAGGTACATTGTTATGTTCTGATCAAGTTCAAAGAGTTCTTTCTCCTCTCCCTATATGGACAGCAGTAGGAGATGGTTCTATTGACATCAATATTTGTTTTCCTTATGCATTTTATGATTGTTTTGATTTTTCATTATATCTGTATATGGTAATTGACGTAGAGTGATGATATTTTTATAGGCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACAC</genome_strand>
        <mrna_strand>TTTCTTGGTCTTCCTGTTGAGTTTGAACCTGAAGTACCTAGAAGACCCCCAAGTGCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGAGTCTTTGGAGTTTCGACAGATTGCATGCAGCTTTCATTTGACTCTCGAGGAAATAGTGTCCCCACAATCCTTCTGATGATGCAAGGGCGCTTATACGTTCAAGGTGGCTTGCAG...........................................................................................................................................GCTGAAGGGATCTTCAGGATCAATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAATAGGGGGATTATTCCAGATAACATTGACGTCCATTGCTTAGCAGGTCTTATAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E576615" ref_strand="-" ref_description="SGN-E576615 [59861]">
      <seq>cttacaagcaaccaaagatttcctaaaccagctaaacaaagtgttaacaaagacagctgatctcccccttcttctctttctctcctttttctctctctttttctaccagaaatactaactcctcttacttgtacctcagtattatttccccctctgtatacatctacaacagaatacaaattgggtccactaattagactttcttggtgagacccatcattatctctagctactaaacatggtagtatactaatggagcttgaagatgaaggtaactcatgttggggttgtataatttcagtcattttcaacaaacccacaataaaaaagattggattttttttgtgggttttaaatttttaatggtacaacaaatcaagaaaagctcctatcttataatttcaatcattttcaagaaacccacaagattggatttttatgtaaagattggatttttcttggtgggttttaattgtagaacaagaagcaagaaaagtttggtggacactttaaaagaaaatttgagtaaacccccctttatgatagtttggtagattagtagaaatggggtttgagtagagttggattcaagcaaaggttggtttttggaaggtgagatattaatatcatcatcactttcaatacattctcattttcttctccctattttatggaagcacttcaattctttatatgaaaaacactctataggggagtagggagaatttagtagagtttgaggagaaaaaagagagagaaactatactatagaaagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="44487" stop="45996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44787" g_stop="45132" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45133" i_stop="45238" i_length="106">
            <donor d_prob="0.693" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45239" g_stop="45696" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="778" r_length="433" r_score="0.865"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E576615" ref_strand="-">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>804</cumulative_length_of_scored_exons>
        <coverage percentage="1.033" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E576615" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="44787" e_stop="45132"/>
          <exon e_start="45239" e_stop="45696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTACAAGCAACCAAAGATTTCCTAAAACCAGTTAAACAAAGTGTTAACAAAGACAGCTGATCTCCCCCTTCTTCTCTTTCTCTCCTTTTTCTCTCTCTTTTTCTACCAGAAATACTAACTCCTCTTACTTCTACCTCACTATTATCTCCCCCTCTGTATACATCTACAACAGAATACACATTGGGTCCACTAATTACACTCTCTTGGTGAGACCCATCATTATCCCTAGCAACTAAACATGGTAGTATACTAATGGAGCTTGAAGCTGAAGGTAACTCATGTTGGGGTTGTATAATTTCAGTCATTTTCAAGAAACCCACAATAAAAAAGATTGGATTTTTAATGGTACAACAAATCAAGAAAAAGCTCCTACCTTATAATTTCAGTCATTTTCAAGAAACCCACAAAAAAAATCCTTTTTTTATTTAAAGATTGGGTTTTTTTTTTTTGGTGGGTTCTAAA--TTTAATGGTAGAACAAATCAAGAAAAGCTCCTACCTTATAATATCAATCATTTTCAAGAAACCCACAAAAAAAAAATCCTTTTTTTTATTTAAAGATTGGATTTTTATATAAAGATTGGATTTTTCTTGGTGGGTTTTAATTGTATAACAAGAAGCAAGAAAAGTTTGGTGAAAAATTT-ACA-ACAACTTGAGTAAAACCCTTCTTTATGATAAGTTTGGTAGATTAGTAGAAATGGGGTTTGAGTAGAGTTGGATTCAAGCAAAGTTTGGTTTTTGGAAGGTGAGACATTAATATCATCATCACTTTCAATACATTTTCATTTTCTTCTCCTTATTTTATGGAAGCACTTCAATTCTTTATATGAAAAAAACTCAATAGGGGAGTAAGGGAGAATATGGTATAGTTCGAGGAGAAAAAAGAGAAAGAAACTATACTATAGAAAGAAG</genome_strand>
        <mrna_strand>CTTACAAGCAACCAAAGATTTCCT-AAACCAGCTAAACAAAGTGTTAACAAAGACAGCTGATCTCCCCCTTCTTCTCTTTCTCTCCTTTTTCTCTCTCTTTTTCTACCAGAAATACTAACTCCTCTTACTTGTACCTCAGTATTATTTCCCCCTCTGTATACATCTACAACAGAATACAAATTGGGTCCACTAATTAGACTTTCTTGGTGAGACCCATCATTATCTCTAGCTACTAAACATGGTAGTATACTAATGGAGCTTGAAGATGAAGGTAACTCATGTTGGGGTTGTATAATTTCAGTCATTTTCAACAAACCCACAATAAAAAAGATTGGATTTTTTTTG..........................................................................................................TGGGTTTTAAATTTTTAATGGTACAACAAATCAAGAAAAGCTCCTATCTTATAATTTCAATCATTTTCAAGAAA-CC-C---------A--C-------------AAGATTGGATTTTTATGTAAAGATTGGATTTTTCTTGGTGGGTTTTAATTGTAGAACAAGAAGCAAGAAAAGTTTGGTGGACACTTTAAAAGAAAATTTGAGT-AAACCCCCCTTTATGAT-AGTTTGGTAGATTAGTAGAAATGGGGTTTGAGTAGAGTTGGATTCAAGCAAAGGTTGGTTTTTGGAAGGTGAGATATTAATATCATCATCACTTTCAATACATTCTCATTTTCTTCTCCCTATTTTATGGAAGCACTTCAATTCTTTATATGAAAAACACTCTATAGGGGAGT-AGGGAGAATTTAGTAGAGTTTGAGGAGAAAAAAGAGAGAGAAACTATACTATAGAAAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E298638" ref_strand="+" ref_description="SGN-E298638 [cLET-44-A20]">
      <seq>tcattacatcggatttcagggtgagctaacgcttctagcttggactggatcttcttcttcatgtcttgatgccttgaagttccggcatggactagctgtttatgtattttagcttcttagatactcttagatttagtaatttgaagtacatgttcttgtgatgatgactgccagattttggggataataatagttgttgagtttttagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="51733" stop="50935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51433" g_stop="51212" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E298638" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>222</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298638" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51433" e_stop="51212"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTACATCGGATTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCCTCCTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTTTTTATGTATTTTAGCTTCTTAGATACTCTTAGA-TTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGAAGAATAATAATAGTTGTTGAGTTTTTAGAAGTTATTGAA</genome_strand>
        <mrna_strand>TCATTACATCGGATTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTGTTTATGTATTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAAG-TACATGTTCTTGTGATGATGACTGCCAGATTTTGGG--G-ATAATAATAGTTGTTGAGTTTTTAGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E290904" ref_strand="+" ref_description="SGN-E290904 [cLET-8-A11]">
      <seq>catttcacagacatgggagacctgaatttcctcatgtgcagggccattgataatcccggcttaactccatcctcttcacttagaacttctctgatctccgtgtttgaagacactgagatcgatacctccagcacaatgcatcaagaaatcggattacaagacttcatcgggtgtgcattcgcgcatgggggaggcccttatattgccatattcgacacaatcagggacaggacatttggattgtgcatgcgtgaatcccttccccttgcatactagagagcaaatacaggagctcattggtgaaatgaaaaaaatccttattgactgctagtatattactaaaacaagacactatattctcccactcatcatgttcaatgaaaatgcagtaagttggtcgtttttgacaaatgaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="56706" stop="55700"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56406" g_stop="55991" g_length="416"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="418" r_length="418" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E290904" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>416</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56406" e_stop="55991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGTGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATCAGGGAC-GGACATTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGAGAGCAAATACAGGAGCTCATTGGTGAAATGAAAAAAATCCTTATTGACTGCTAGTATATTACTAAAACAA-ACACTATATTTTCCCACTCATCATGTTCAATGAAAATGCAGTAAGTTGTTTGTTTTTGACATCAAAAGTT</genome_strand>
        <mrna_strand>CATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGAGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTACAAGACTTCATCGGGTGTGCATTCGCGCATGGGGGAGGCCCTTATATTGCCATATTCGACACAATCAGGGACAGGACATTTGGATTGTGCATGCGTGAATCCCTTCCCCTTGCATACTAGAGAGCAAATACAGGAGCTCATTGGTGAAATGAAAAAAATCCTTATTGACTGCTAGTATATTACTAAAACAAGACACTATATTCTCCCACTCATCATGTTCAATGAAAATGCAGTAAGTTGGTCGTTTTTGACAAATGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E452742" ref_strand="+" ref_description="SGN-E452742 [cSTS-17-H2]">
      <seq>cggaatcaacgagaggatcacaagttgtgaaattgcagttgaataaagaagaaactgatcgcattcttgatggctgcaaaacgagagatataaaactgtgtggactgttggctgctgctggattaattgcagctcattcctcaaaaggcctaaatgagaatcaatgggagaagtatgcaattgtaacccttattaacctgccgttcaattcttgatccagtgcttagccctgattttccaggcttttatcattctgccatcctcaacacgcatgacgttaagggaggagatgatttatgggagctagcaaagagaagttacacatcttttatcaacgccaagaacaataacaagcatttcacagacatgggagacctgaatttcctcatgtgcagggccattgataatcccggcttaactccatcctcttcactaaggacttctctcatctctgtgtttgaagaccctgtgattgatacctccagcacagtgcatcaagaaatcggattagaagacttcatcgggtgtgcatccgtgcatggggtaggcccttctattgccatattcgacacaattagggacggacagttggattgtgcatgtgtttatcccttccccttgcatactanggaacaaatgcangagctcattgntgaaatgaaaaaaatccttgttgactgctagtatattactaaaacaaacattatgtttccccactgnatcatgttcaatgaaaatgcaataaatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60251" stop="55714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59951" g_stop="59881" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59880" i_stop="58055" i_length="1826">
            <donor d_prob="0.987" d_score="0.94"/>
            <acceptor a_prob="0.968" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58054" g_stop="57886" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="241" r_length="170" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56519" g_stop="56012" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="750" r_length="509" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E452742" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E452742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59951" e_stop="59881"/>
          <exon e_start="58054" e_stop="57886"/>
          <exon e_start="56519" e_stop="56012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGATGTAAGTTCTTCGCATTTTAGTAAATTTCTTACCTTTTTACGCATCTCGATTAATTTCATTTTATTTATGATTTTGTTCATCGAGACTTGATTAGATAAGAAGAAATCACATAGCACTTGTTAAGTCTTTGATAGTTTTTTTTGACAACACATTAATTTTAAACTTTTGCGCTTATTTCTTTTTTTTATAAATTTTATGTTTATTAAGGCTTGATTAGATAAGAAGAGATCACATACTCACTCGTTTCAATTTGTTTATTTTGTTATCTTTTTAGTCGTTTCAAATAAGAACGACTCTTTTTTCTTTTTTGGTTGACCTCTCATTAATTTTATTTTTCATGTGATATGTTTACTCACAAGATTAAAAGTTATTTTGATATATTTTATATATCTTTAATTTAAAATGATAGGAATCGATTTCTAAAACTATATTTTAAATTATAATCAGATAAATAAATTGAAACGGGAATAGTGTTTTTCTTAAGCTTCCTTAATTTAGAGCAAGATAGTGATATTCCTTTTTTTCTCTTTCAATAAATTTAATTGTCAGTGTGTTAAATATATATTTGATAATTGATAGAGAAACACTAATGTTTTACAAACTTAAAGAATTTAAAACTTTTAAAATACTATATTTAAGGAAGTATGTTAAGCCTATCTAAATTAAAAGGATTATTTTTGTCATTTTCTCGATGTATGGTGTGTTGTCTTTAATCATATATTTTTCTGACTTTATCATAATTAATTATAATTTCCTTAGTATTATTTGATAATGTATATTTTTCTCACTTAATCATAAATTAATTATAATATCCTTAGTGGTATATTAAAAATATGAAAATAGATATTATGGTTGAAATTTAAGTGGAGACAATACATTAGATGATTCAAATTTCTTTCTCTAGTATTGAAATCGAATTGGCAGAAAGTACCGAAAGTCGGCCTCCCGCCCTATCATCCCGTGTCTCAACCAATTTTTTTCTTGTCTCCAAATCTCTCTTTTGGCTTTTGAAACTTTGATTCGGTGCCTAAATTTTGATCGATAAAGTTATCTGGTATTTACCTAGATGGCAAATAGTAGGTATCTAATTGATAACGTTTGCAAACTGAGTTGAACATCATCGTCATACAAAAATAGATTTAAATGTCATTTTCAAATTGTCAAGTTAGGTTGACATTTTATTTTCATTTTCTTTAGAAATTAGGCAAAGCTACTCTATGAAAACTTGCTTGGCCCAATTTTCTTTTTTAGGTTAGTCTCATTTATGGCCCTCATTGAATATTCTCTTCACATGATGTCCAACTTTAATCATATTTGAATTGTGAATTGGCCAATTTGCATGCTACATCTTTCACATGACTAGAATCTGGCCTGATTGTGAGTAATGATATTACTAATTTTTCTAAAAATAACTCGTGGTGTTCGGGTCGACTAGTGGTTACCTCAGTACTTTCCATCTGCATGTGTATCAAGCAACTCTGTTCACCGAGAATGGTATAAACTAATACCGTTAAATCAAAAGATCCAATTCGGCTCAACTAAGATCAGGTTTATAGCCTGATTAATGGTTTAAATTTTATACATCGACAGTGCAAGATCACATTATTTAGAAGTTAGTTGTATGTAACTGCCTGTGATAAGTGTGTGCGACACTACAAAAATGTTGTTCGCCAATGTCAAATCTTCAAAAATTACATTACTTTATCCGAATGCACCTGAAAAACATTTTTGAAGAGTCTGAGCAACAGGTTACGACTCCCTATCTAAATGTACATTGTTTGCACTTTAGAGCATTAGAGGTAGTAACAAAATCTGAATTTTGGTAGGGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAA-CTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAGGTTCGTTAATGCATTCATGGTAAAAACTTACTTGTATCGGGTCTTTATATTTCTTGTACCGAGGCCTCCACTCTTGACACCCATCTAACCCCATTGGTTACTACTGTCTACTGGTATCCGATCTTTTTTTTCTTCTTTTTGGACCCAAGTTAATAATAAATGGTACCGCTACTGATGTTCTACCAGTTGGTCAAGGCTAGTACACTCTTAGGTCCAGGTAACTACTCCCAATTGATCAAGGCTAGTACACATGACAGACTCTAGAACCCCCTCTTTGATTTTCGTGCTCAAGCGTTGCTTTGATAGTAATTGTTATAGACTAAATAGAAAACCTCAGCCTATTAAGGGAGGGAGAACCTGTCAATCTATAAACTCATACGTACACTCAATCGGGAGTCAAGTATTGGTTTGCAAGGATTCCTTTTAAGGTAAATAATAGAGTTGCTATATGTGACTTGCAAGTTCGTTGCCCATTATCTATGTACTTGGAAAAGCTCAAATTACCCTTAGTCTGCTGGAAACATCCTATTAGCCCTTTTAACTTGAGCAAGTACACCATACTTCAGTAGTCAGTACCATGTGATTGTTCTTACATTTGATGTAACTCTCACTTCTGTTCAGCTTTTTCTTTTCATTGCTATTGTTGTATCTTATCAGCCTTTCTCGAGTCTTAAAACTCCGACTTCTAAACTCAAAACTGGTTTGAAATGCCCATTTTGAGCTGGTTCAGGCTGATTGTTCCCGCTTATCTAGATTTCACTAATTGTGAGCTTCTGTTATTTTGGTCATTTCGATTACTGCATTGTGATGTTTACTGAACAGAGCATGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCTTAGCATCTGGTGCGTGAGCAATTTTTAATTTTGGGGCTTTGATACCATGTTTAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCCTAAGCCTTATAAAGAGTCCACCCATCTCATTAATCACCGATGTGGGACTTTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCGTGGACAATTTTACGCCCAGTGCGTGGACAATTTTAATTTTGGGGACCACAACATCGGGTGAGACGGACCCAGCTCTGATACCATGTGAAATTAGGTCTTAGGCCTAACTCACACCTCAAAAGCTAGCTCAAAGAGAGGAGGATTGCCTAAGCCTTATAAAGAATTCACCCATCTCATTAATCATCGATGTGAGACTTTTGTCATTCTTTAACAGAGCATATTAAAATGATCTAAATCGTGCAGGCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGTGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATCAGGGACGGACATTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGAGAGCAAATACAGGAGCTCATTGGTGAAATGAAAAAAATCCTTATTGACTGCTAGTATATTACTAAAACAAACACTATATTTTCCCACT-CATCATGTTCAATGAAAATGCAGTAAGTTGT</genome_strand>
        <mrna_strand>CGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAAGAAGAAACTGATCGCATTCTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCAAAACGAGAGATATAAAACTGTGTGGACTGTTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTCAAAAGGCCTAAATGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACCTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGATTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTAAGGACTTCTCTCATCTCTGTGTTTGAAGACCCTGTGATTGATACCTCCAGCACAGTGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATTAGGGACGGACAGTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTANGGAACAAATGCANGAGCTCATTGNTGAAATGAAAAAAATCCTTGTTGACTGCTAGTATATTACTAAAACAAACATTATGTTTCCCCACTGNATCATGTTCAATGAAAATGCAATAAATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E423812" ref_strand="-" ref_description="SGN-E423812 [STM-42-J9]">
      <seq>ggtatggattgaatcatttgcgattttctaatttgaagtttatggattcggaatcaacaagaggatcacaagttgtgaaattgcagttgaataaagaagaaactgatcgcattcttgatggctgcaaaacgagagatataaaactatgtggactgttggctgctgctggattaattgcagctcattcctcaaaaggcctaaatgagaatcaatgggagaagtatgcaattgtaaccctaattaactgccgttcaattcttgatccagtgcttagccctgattttccaggcttttatcattctgccatcctcaacacgcatgacgtaaagggaggagatgatttatgggagctagcaaagagaagttacacatcttttatcaacgccaagaacaataacaagcatttcacagacatgggagacctgaatttcctcatgtgcagggccattgataatcctggcttaactccatcctcttcactaaggacttctctcatctctgtatttgaagaccctgtgattgatacctccagcacagtgcatcaagaaatcggattagaagacttcatcgggtgtgcatccgtgcatggggtaggcccttctattgccatattcgacacaattagggacggacagttggattgtgcatgtgtttatcccttccccttgcatactagggaacaaatgcaggagctcattggtgaaatgaaaaaaatccttgttgactgctagtatattactaaaacaaacatgatgtttccccactgatcatgttcaatgaaaatgaaataaatttcctacaaaaaaaaaaaagagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60299" stop="55714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59999" g_stop="59881" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.916"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59880" i_stop="58055" i_length="1826">
            <donor d_prob="0.987" d_score="0.94"/>
            <acceptor a_prob="0.968" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58054" g_stop="57886" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="288" r_length="169" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56519" g_stop="56021" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="787" r_length="499" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="799" polyA_stop="812"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E423812" ref_strand="-">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>787</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423812" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="59999" e_stop="59881"/>
          <exon e_start="58054" e_stop="57886"/>
          <exon e_start="56519" e_stop="56021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGATGTAAGTTCTTCGCATTTTAGTAAATTTCTTACCTTTTTACGCATCTCGATTAATTTCATTTTATTTATGATTTTGTTCATCGAGACTTGATTAGATAAGAAGAAATCACATAGCACTTGTTAAGTCTTTGATAGTTTTTTTTGACAACACATTAATTTTAAACTTTTGCGCTTATTTCTTTTTTTTATAAATTTTATGTTTATTAAGGCTTGATTAGATAAGAAGAGATCACATACTCACTCGTTTCAATTTGTTTATTTTGTTATCTTTTTAGTCGTTTCAAATAAGAACGACTCTTTTTTCTTTTTTGGTTGACCTCTCATTAATTTTATTTTTCATGTGATATGTTTACTCACAAGATTAAAAGTTATTTTGATATATTTTATATATCTTTAATTTAAAATGATAGGAATCGATTTCTAAAACTATATTTTAAATTATAATCAGATAAATAAATTGAAACGGGAATAGTGTTTTTCTTAAGCTTCCTTAATTTAGAGCAAGATAGTGATATTCCTTTTTTTCTCTTTCAATAAATTTAATTGTCAGTGTGTTAAATATATATTTGATAATTGATAGAGAAACACTAATGTTTTACAAACTTAAAGAATTTAAAACTTTTAAAATACTATATTTAAGGAAGTATGTTAAGCCTATCTAAATTAAAAGGATTATTTTTGTCATTTTCTCGATGTATGGTGTGTTGTCTTTAATCATATATTTTTCTGACTTTATCATAATTAATTATAATTTCCTTAGTATTATTTGATAATGTATATTTTTCTCACTTAATCATAAATTAATTATAATATCCTTAGTGGTATATTAAAAATATGAAAATAGATATTATGGTTGAAATTTAAGTGGAGACAATACATTAGATGATTCAAATTTCTTTCTCTAGTATTGAAATCGAATTGGCAGAAAGTACCGAAAGTCGGCCTCCCGCCCTATCATCCCGTGTCTCAACCAATTTTTTTCTTGTCTCCAAATCTCTCTTTTGGCTTTTGAAACTTTGATTCGGTGCCTAAATTTTGATCGATAAAGTTATCTGGTATTTACCTAGATGGCAAATAGTAGGTATCTAATTGATAACGTTTGCAAACTGAGTTGAACATCATCGTCATACAAAAATAGATTTAAATGTCATTTTCAAATTGTCAAGTTAGGTTGACATTTTATTTTCATTTTCTTTAGAAATTAGGCAAAGCTACTCTATGAAAACTTGCTTGGCCCAATTTTCTTTTTTAGGTTAGTCTCATTTATGGCCCTCATTGAATATTCTCTTCACATGATGTCCAACTTTAATCATATTTGAATTGTGAATTGGCCAATTTGCATGCTACATCTTTCACATGACTAGAATCTGGCCTGATTGTGAGTAATGATATTACTAATTTTTCTAAAAATAACTCGTGGTGTTCGGGTCGACTAGTGGTTACCTCAGTACTTTCCATCTGCATGTGTATCAAGCAACTCTGTTCACCGAGAATGGTATAAACTAATACCGTTAAATCAAAAGATCCAATTCGGCTCAACTAAGATCAGGTTTATAGCCTGATTAATGGTTTAAATTTTATACATCGACAGTGCAAGATCACATTATTTAGAAGTTAGTTGTATGTAACTGCCTGTGATAAGTGTGTGCGACACTACAAAAATGTTGTTCGCCAATGTCAAATCTTCAAAAATTACATTACTTTATCCGAATGCACCTGAAAAACATTTTTGAAGAGTCTGAGCAACAGGTTACGACTCCCTATCTAAATGTACATTGTTTGCACTTTAGAGCATTAGAGGTAGTAACAAAATCTGAATTTTGGTAGGGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAGGTTCGTTAATGCATTCATGGTAAAAACTTACTTGTATCGGGTCTTTATATTTCTTGTACCGAGGCCTCCACTCTTGACACCCATCTAACCCCATTGGTTACTACTGTCTACTGGTATCCGATCTTTTTTTTCTTCTTTTTGGACCCAAGTTAATAATAAATGGTACCGCTACTGATGTTCTACCAGTTGGTCAAGGCTAGTACACTCTTAGGTCCAGGTAACTACTCCCAATTGATCAAGGCTAGTACACATGACAGACTCTAGAACCCCCTCTTTGATTTTCGTGCTCAAGCGTTGCTTTGATAGTAATTGTTATAGACTAAATAGAAAACCTCAGCCTATTAAGGGAGGGAGAACCTGTCAATCTATAAACTCATACGTACACTCAATCGGGAGTCAAGTATTGGTTTGCAAGGATTCCTTTTAAGGTAAATAATAGAGTTGCTATATGTGACTTGCAAGTTCGTTGCCCATTATCTATGTACTTGGAAAAGCTCAAATTACCCTTAGTCTGCTGGAAACATCCTATTAGCCCTTTTAACTTGAGCAAGTACACCATACTTCAGTAGTCAGTACCATGTGATTGTTCTTACATTTGATGTAACTCTCACTTCTGTTCAGCTTTTTCTTTTCATTGCTATTGTTGTATCTTATCAGCCTTTCTCGAGTCTTAAAACTCCGACTTCTAAACTCAAAACTGGTTTGAAATGCCCATTTTGAGCTGGTTCAGGCTGATTGTTCCCGCTTATCTAGATTTCACTAATTGTGAGCTTCTGTTATTTTGGTCATTTCGATTACTGCATTGTGATGTTTACTGAACAGAGCATGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCTTAGCATCTGGTGCGTGAGCAATTTTTAATTTTGGGGCTTTGATACCATGTTTAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCCTAAGCCTTATAAAGAGTCCACCCATCTCATTAATCACCGATGTGGGACTTTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCGTGGACAATTTTACGCCCAGTGCGTGGACAATTTTAATTTTGGGGACCACAACATCGGGTGAGACGGACCCAGCTCTGATACCATGTGAAATTAGGTCTTAGGCCTAACTCACACCTCAAAAGCTAGCTCAAAGAGAGGAGGATTGCCTAAGCCTTATAAAGAATTCACCCATCTCATTAATCATCGATGTGAGACTTTTGTCATTCTTTAACAGAGCATATTAAAATGATCTAAATCGTGCAGGCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGTGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATCAGGGACGGACATTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGAGAGCAAATACAGGAGCTCATTGGTGAAATGAAAAAAATCCTTATTGACTGCTAGTATATTACTAAAACAAACACTATATTTTCCCACTCATCATGTTCAATGAAAATGCA</genome_strand>
        <mrna_strand>GGTATGGATTGAATCATTTGCGATTTTCTAATTTGAAGTTTATGGATTCGGAATCAACAAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAAGAAGAAACTGATCGCATTCTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCAAAACGAGAGATATAAAACTATGTGGACTGTTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTCAAAAGGCCTAAATGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTAATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTATCATTCTGCCATCCTCAACACGCATGACGTAAAGGGAGGAGATGATTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCTGGCTTAACTCCATCCTCTTCACTAAGGACTTCTCTCATCTCTGTATTTGAAGACCCTGTGATTGATACCTCCAGCACAGTGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATTAGGGACGGACAGTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGGGAACAAATGCAGGAGCTCATTGGTGAAATGAAAAAAATCCTTGTTGACTGCTAGTATATTACTAAAACAAACATGATGTTTCCCCACTGATCATGTTCAATGAAAATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E612755" ref_strand="+" ref_description="SGN-E612755 [62521]">
      <seq>cttgatggctgcaaaacgagagatataaaactatgtggactgttggctgctgctggattaattgcagctcattcctcaaaaggcctaaatgagaatcaatgggagaagtatgcaattgtaaccctaattaactgccgttcaattcttgatccagtgcttagccctgattttccaggcttttatcattctgccatcctcaacacgcatgacgtaaagggaggagatgatttatgggagctagcaaagagaagttacacatcttttatcaacgccaagaacaataacaagcatttcacagacatgggagacctgaatttcctcatgtgcagggccattgataatcctggcttaactccatcctcttcactaaggacttctctcatctctgtatttgaagaccctgtgattgatacctccagcacagtgcatcaagaaatcggattagaagacttcatcgggtgtgcatccgtgcatggggtaggcccttctattgccatattcgacacaattagggacggacagttggattgtgcatgtgtttatcccttccccttgcatactagggaacaaatgcaggagctcattggtgaaatgaaaaaaatccttgttgactgctagtatattactaaaacaaacatgatgtttccccactgatcatgttcaatgaaaatgcaataaatttcctacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="58361" stop="55714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58054" g_stop="57886" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="175" r_length="169" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56519" g_stop="56021" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="674" r_length="499" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="686" polyA_stop="697"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E612755" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E612755" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58054" e_stop="57886"/>
          <exon e_start="56519" e_stop="56021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAGGTTCGTTAATGCATTCATGGTAAAAACTTACTTGTATCGGGTCTTTATATTTCTTGTACCGAGGCCTCCACTCTTGACACCCATCTAACCCCATTGGTTACTACTGTCTACTGGTATCCGATCTTTTTTTTCTTCTTTTTGGACCCAAGTTAATAATAAATGGTACCGCTACTGATGTTCTACCAGTTGGTCAAGGCTAGTACACTCTTAGGTCCAGGTAACTACTCCCAATTGATCAAGGCTAGTACACATGACAGACTCTAGAACCCCCTCTTTGATTTTCGTGCTCAAGCGTTGCTTTGATAGTAATTGTTATAGACTAAATAGAAAACCTCAGCCTATTAAGGGAGGGAGAACCTGTCAATCTATAAACTCATACGTACACTCAATCGGGAGTCAAGTATTGGTTTGCAAGGATTCCTTTTAAGGTAAATAATAGAGTTGCTATATGTGACTTGCAAGTTCGTTGCCCATTATCTATGTACTTGGAAAAGCTCAAATTACCCTTAGTCTGCTGGAAACATCCTATTAGCCCTTTTAACTTGAGCAAGTACACCATACTTCAGTAGTCAGTACCATGTGATTGTTCTTACATTTGATGTAACTCTCACTTCTGTTCAGCTTTTTCTTTTCATTGCTATTGTTGTATCTTATCAGCCTTTCTCGAGTCTTAAAACTCCGACTTCTAAACTCAAAACTGGTTTGAAATGCCCATTTTGAGCTGGTTCAGGCTGATTGTTCCCGCTTATCTAGATTTCACTAATTGTGAGCTTCTGTTATTTTGGTCATTTCGATTACTGCATTGTGATGTTTACTGAACAGAGCATGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCTTAGCATCTGGTGCGTGAGCAATTTTTAATTTTGGGGCTTTGATACCATGTTTAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCCTAAGCCTTATAAAGAGTCCACCCATCTCATTAATCACCGATGTGGGACTTTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCGTGGACAATTTTACGCCCAGTGCGTGGACAATTTTAATTTTGGGGACCACAACATCGGGTGAGACGGACCCAGCTCTGATACCATGTGAAATTAGGTCTTAGGCCTAACTCACACCTCAAAAGCTAGCTCAAAGAGAGGAGGATTGCCTAAGCCTTATAAAGAATTCACCCATCTCATTAATCATCGATGTGAGACTTTTGTCATTCTTTAACAGAGCATATTAAAATGATCTAAATCGTGCAGGCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGTGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATCAGGGACGGACATTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGAGAGCAAATACAGGAGCTCATTGGTGAAATGAAAAAAATCCTTATTGACTGCTAGTATATTACTAAAACAAACACTATATTTTCCCACTCATCATGTTCAATGAAAATGCA</genome_strand>
        <mrna_strand>GGCTGCAAAACGAGAGATATAAAACTATGTGGACTGTTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTCAAAAGGCCTAAATGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTAATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTATCATTCTGCCATCCTCAACACGCATGACGTAAAGGGAGGAGATGATTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCTGGCTTAACTCCATCCTCTTCACTAAGGACTTCTCTCATCTCTGTATTTGAAGACCCTGTGATTGATACCTCCAGCACAGTGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATTAGGGACGGACAGTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGGGAACAAATGCAGGAGCTCATTGGTGAAATGAAAAAAATCCTTGTTGACTGCTAGTATATTACTAAAACAAACATGATGTTTCCCCACTGATCATGTTCAATGAAAATGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E623030" ref_strand="-" ref_description="SGN-E623030 [73404]">
      <seq>agctcattcctcaaaaggcctaaatgagaatcaatgggagaagtatgcaattgtaaccctaattaactgccgttcaattcttgatccagtgcttaggcctgattttccaggcttttatcattctgccatcctcaacacgcatgacgtaaagggaggagatgatttatgggagctagcaaagagaagttacacatcttttatcaacgccaagaacaataacaagcatttcacagacatgggagacctgaatttcctcatgtgcagggccattgataatcctggcttaactccatcctcttcactaaggacttctctcatctctgtatttgaagaccctgtgattgatacctccagcacagtgcatcaagaaatcggattagaagacttcatcgggtgtgcatccgtgcatggggtaggcccttctattgccatattcgacacaattagggacggacagttggattgtgcatgtgtttatcccttccccttgcatactagggaacaaatgcaggagctcattggtgaaatgaaaaaaatccttgttgactgctagtatattactaaaacaaacatgatgtttccccactgatcatgttcaatgaaaatgcaataaatttcctacaaacagtttgtttttttaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="58295" stop="55714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57995" g_stop="57886" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.975" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56519" g_stop="56021" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="609" r_length="499" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E623030" ref_strand="-">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E623030" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="57995" e_stop="57886"/>
          <exon e_start="56519" e_stop="56021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAGGTTCGTTAATGCATTCATGGTAAAAACTTACTTGTATCGGGTCTTTATATTTCTTGTACCGAGGCCTCCACTCTTGACACCCATCTAACCCCATTGGTTACTACTGTCTACTGGTATCCGATCTTTTTTTTCTTCTTTTTGGACCCAAGTTAATAATAAATGGTACCGCTACTGATGTTCTACCAGTTGGTCAAGGCTAGTACACTCTTAGGTCCAGGTAACTACTCCCAATTGATCAAGGCTAGTACACATGACAGACTCTAGAACCCCCTCTTTGATTTTCGTGCTCAAGCGTTGCTTTGATAGTAATTGTTATAGACTAAATAGAAAACCTCAGCCTATTAAGGGAGGGAGAACCTGTCAATCTATAAACTCATACGTACACTCAATCGGGAGTCAAGTATTGGTTTGCAAGGATTCCTTTTAAGGTAAATAATAGAGTTGCTATATGTGACTTGCAAGTTCGTTGCCCATTATCTATGTACTTGGAAAAGCTCAAATTACCCTTAGTCTGCTGGAAACATCCTATTAGCCCTTTTAACTTGAGCAAGTACACCATACTTCAGTAGTCAGTACCATGTGATTGTTCTTACATTTGATGTAACTCTCACTTCTGTTCAGCTTTTTCTTTTCATTGCTATTGTTGTATCTTATCAGCCTTTCTCGAGTCTTAAAACTCCGACTTCTAAACTCAAAACTGGTTTGAAATGCCCATTTTGAGCTGGTTCAGGCTGATTGTTCCCGCTTATCTAGATTTCACTAATTGTGAGCTTCTGTTATTTTGGTCATTTCGATTACTGCATTGTGATGTTTACTGAACAGAGCATGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCTTAGCATCTGGTGCGTGAGCAATTTTTAATTTTGGGGCTTTGATACCATGTTTAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCCTAAGCCTTATAAAGAGTCCACCCATCTCATTAATCACCGATGTGGGACTTTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCGTGGACAATTTTACGCCCAGTGCGTGGACAATTTTAATTTTGGGGACCACAACATCGGGTGAGACGGACCCAGCTCTGATACCATGTGAAATTAGGTCTTAGGCCTAACTCACACCTCAAAAGCTAGCTCAAAGAGAGGAGGATTGCCTAAGCCTTATAAAGAATTCACCCATCTCATTAATCATCGATGTGAGACTTTTGTCATTCTTTAACAGAGCATATTAAAATGATCTAAATCGTGCAGGCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGTGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATCAGGGACGGACATTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGAGAGCAAATACAGGAGCTCATTGGTGAAATGAAAAAAATCCTTATTGACTGCTAGTATATTACTAAAACAAACACTATATTTTCCCACTCATCATGTTCAATGAAAATGCA</genome_strand>
        <mrna_strand>AGCTCATTCCTCAAAAGGCCTAAATGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTAATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGGCCTGATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTATCATTCTGCCATCCTCAACACGCATGACGTAAAGGGAGGAGATGATTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCTGGCTTAACTCCATCCTCTTCACTAAGGACTTCTCTCATCTCTGTATTTGAAGACCCTGTGATTGATACCTCCAGCACAGTGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATTAGGGACGGACAGTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGGGAACAAATGCAGGAGCTCATTGGTGAAATGAAAAAAATCCTTGTTGACTGCTAGTATATTACTAAAACAAACATGATGTTTCCCCACTGATCATGTTCAATGAAAATGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E558622" ref_strand="-" ref_description="SGN-E558622 [17991]">
      <seq>aaatgagaatcaatggaagaagtatgcaattgtaacccttattaactgccgttcaattcttgatccagtgcttagccctgattttccaggcttttatcattctgccatcctcaacacgcatgacgttaagggaggagatgatttatgggagctagcaaagagaagttacacatcttttatcaacgccaagaacaataacaagcatttcacagacatgggagacctgaatttcctcatgtgcagggccattgataatcccggcttaactccatcctcttcactaaggacttctctcatctctgtgtttgaagaccctgtgattgatacctccagcacagtgcatcaagaaatcggattagaagagcttcatcgggtgtgcatccgtgcatggggtaggcccttctattgccatattcgacacaattagggacggacagttggattgtgcatgtgtttatcccttccccttgcatactagggaacaaatgcaggagctcattggtgaaatgaaaaaaatccttgttgactgctagtatattactaaaacaaacattatgtttccccactgatcatgttcaatgaaaatgcaataaatttgcctacaagcagtttgtttttttacaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="58274" stop="55714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57974" g_stop="57886" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56519" g_stop="56021" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="589" r_length="500" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E558622" ref_strand="-">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558622" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="57974" e_stop="57886"/>
          <exon e_start="56519" e_stop="56021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAGGTTCGTTAATGCATTCATGGTAAAAACTTACTTGTATCGGGTCTTTATATTTCTTGTACCGAGGCCTCCACTCTTGACACCCATCTAACCCCATTGGTTACTACTGTCTACTGGTATCCGATCTTTTTTTTCTTCTTTTTGGACCCAAGTTAATAATAAATGGTACCGCTACTGATGTTCTACCAGTTGGTCAAGGCTAGTACACTCTTAGGTCCAGGTAACTACTCCCAATTGATCAAGGCTAGTACACATGACAGACTCTAGAACCCCCTCTTTGATTTTCGTGCTCAAGCGTTGCTTTGATAGTAATTGTTATAGACTAAATAGAAAACCTCAGCCTATTAAGGGAGGGAGAACCTGTCAATCTATAAACTCATACGTACACTCAATCGGGAGTCAAGTATTGGTTTGCAAGGATTCCTTTTAAGGTAAATAATAGAGTTGCTATATGTGACTTGCAAGTTCGTTGCCCATTATCTATGTACTTGGAAAAGCTCAAATTACCCTTAGTCTGCTGGAAACATCCTATTAGCCCTTTTAACTTGAGCAAGTACACCATACTTCAGTAGTCAGTACCATGTGATTGTTCTTACATTTGATGTAACTCTCACTTCTGTTCAGCTTTTTCTTTTCATTGCTATTGTTGTATCTTATCAGCCTTTCTCGAGTCTTAAAACTCCGACTTCTAAACTCAAAACTGGTTTGAAATGCCCATTTTGAGCTGGTTCAGGCTGATTGTTCCCGCTTATCTAGATTTCACTAATTGTGAGCTTCTGTTATTTTGGTCATTTCGATTACTGCATTGTGATGTTTACTGAACAGAGCATGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCTTAGCATCTGGTGCGTGAGCAATTTTTAATTTTGGGGCTTTGATACCATGTTTAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCCTAAGCCTTATAAAGAGTCCACCCATCTCATTAATCACCGATGTGGGACTTTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCGTGGACAATTTTACGCCCAGTGCGTGGACAATTTTAATTTTGGGGACCACAACATCGGGTGAGACGGACCCAGCTCTGATACCATGTGAAATTAGGTCTTAGGCCTAACTCACACCTCAAAAGCTAGCTCAAAGAGAGGAGGATTGCCTAAGCCTTATAAAGAATTCACCCATCTCATTAATCATCGATGTGAGACTTTTGTCATTCTTTAACAGAGCATATTAAAATGATCTAAATCGTGCAGGCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGTGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTAGAAGA-CTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATCAGGGACGGACATTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGAGAGCAAATACAGGAGCTCATTGGTGAAATGAAAAAAATCCTTATTGACTGCTAGTATATTACTAAAACAAACACTATATTTTCCCACTCATCATGTTCAATGAAAATGCA</genome_strand>
        <mrna_strand>AAATGAGAATCAATGGAAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGATTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTAAGGACTTCTCTCATCTCTGTGTTTGAAGACCCTGTGATTGATACCTCCAGCACAGTGCATCAAGAAATCGGATTAGAAGAGCTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATTAGGGACGGACAGTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGGGAACAAATGCAGGAGCTCATTGGTGAAATGAAAAAAATCCTTGTTGACTGCTAGTATATTACTAAAACAAACATTATGTTTCCCCACTGATCATGTTCAATGAAAATGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E353825" ref_strand="+" ref_description="SGN-E353825 [cTOS-10-B7]">
      <seq>gattttgtaatttgaagtttatggattcggaatcaacgagaggatcacaagttgtgaaattgcagttgaataaacaagagactgatcacattcttgatggctgtaaaacgagaggtataaaactgtgtggactattggctgctgctggattaattgcagctcattccttaaaaggcctaaaggagaatcaatgggagaagtatgcaattgtaacccttattaactgccgttcaattcttgatccagtgcttagccctgattttccaggcttttatcattctgccatcctcaacacgcatgacgttaagggaggagatgacttatgggagctagcaaagagaagttacacatcttttatcaacgccaagaacaataacaagcatttcacagacatgggagacctgaatttcctcatgtgcagggccattgataatcccggcttaactccatcctcttcacttagaacttctctgatctccgtgtttgaagacactgtgatcgatacctccagcacaatgcatcaagaaatcggattagaagacttcatcgggtgtgcatccgtgcatggggtangcccttctatttgcatattcgacacaatcaggnacggacatttggattgtgcatgtgtttatcccttcccctgcatactagagagcaatacaggagctcattggtgaaatgaaaaaaatcctattgactgctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60278" stop="55777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59978" g_stop="59881" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59880" i_stop="58055" i_length="1826">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58054" g_stop="57886" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="267" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56519" g_stop="56077" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="707" r_length="440" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E353825" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353825" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59978" e_stop="59881"/>
          <exon e_start="58054" e_stop="57886"/>
          <exon e_start="56519" e_stop="56077"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGATGTAAGTTCTTCGCATTTTAGTAAATTTCTTACCTTTTTACGCATCTCGATTAATTTCATTTTATTTATGATTTTGTTCATCGAGACTTGATTAGATAAGAAGAAATCACATAGCACTTGTTAAGTCTTTGATAGTTTTTTTTGACAACACATTAATTTTAAACTTTTGCGCTTATTTCTTTTTTTTATAAATTTTATGTTTATTAAGGCTTGATTAGATAAGAAGAGATCACATACTCACTCGTTTCAATTTGTTTATTTTGTTATCTTTTTAGTCGTTTCAAATAAGAACGACTCTTTTTTCTTTTTTGGTTGACCTCTCATTAATTTTATTTTTCATGTGATATGTTTACTCACAAGATTAAAAGTTATTTTGATATATTTTATATATCTTTAATTTAAAATGATAGGAATCGATTTCTAAAACTATATTTTAAATTATAATCAGATAAATAAATTGAAACGGGAATAGTGTTTTTCTTAAGCTTCCTTAATTTAGAGCAAGATAGTGATATTCCTTTTTTTCTCTTTCAATAAATTTAATTGTCAGTGTGTTAAATATATATTTGATAATTGATAGAGAAACACTAATGTTTTACAAACTTAAAGAATTTAAAACTTTTAAAATACTATATTTAAGGAAGTATGTTAAGCCTATCTAAATTAAAAGGATTATTTTTGTCATTTTCTCGATGTATGGTGTGTTGTCTTTAATCATATATTTTTCTGACTTTATCATAATTAATTATAATTTCCTTAGTATTATTTGATAATGTATATTTTTCTCACTTAATCATAAATTAATTATAATATCCTTAGTGGTATATTAAAAATATGAAAATAGATATTATGGTTGAAATTTAAGTGGAGACAATACATTAGATGATTCAAATTTCTTTCTCTAGTATTGAAATCGAATTGGCAGAAAGTACCGAAAGTCGGCCTCCCGCCCTATCATCCCGTGTCTCAACCAATTTTTTTCTTGTCTCCAAATCTCTCTTTTGGCTTTTGAAACTTTGATTCGGTGCCTAAATTTTGATCGATAAAGTTATCTGGTATTTACCTAGATGGCAAATAGTAGGTATCTAATTGATAACGTTTGCAAACTGAGTTGAACATCATCGTCATACAAAAATAGATTTAAATGTCATTTTCAAATTGTCAAGTTAGGTTGACATTTTATTTTCATTTTCTTTAGAAATTAGGCAAAGCTACTCTATGAAAACTTGCTTGGCCCAATTTTCTTTTTTAGGTTAGTCTCATTTATGGCCCTCATTGAATATTCTCTTCACATGATGTCCAACTTTAATCATATTTGAATTGTGAATTGGCCAATTTGCATGCTACATCTTTCACATGACTAGAATCTGGCCTGATTGTGAGTAATGATATTACTAATTTTTCTAAAAATAACTCGTGGTGTTCGGGTCGACTAGTGGTTACCTCAGTACTTTCCATCTGCATGTGTATCAAGCAACTCTGTTCACCGAGAATGGTATAAACTAATACCGTTAAATCAAAAGATCCAATTCGGCTCAACTAAGATCAGGTTTATAGCCTGATTAATGGTTTAAATTTTATACATCGACAGTGCAAGATCACATTATTTAGAAGTTAGTTGTATGTAACTGCCTGTGATAAGTGTGTGCGACACTACAAAAATGTTGTTCGCCAATGTCAAATCTTCAAAAATTACATTACTTTATCCGAATGCACCTGAAAAACATTTTTGAAGAGTCTGAGCAACAGGTTACGACTCCCTATCTAAATGTACATTGTTTGCACTTTAGAGCATTAGAGGTAGTAACAAAATCTGAATTTTGGTAGGGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAGGTTCGTTAATGCATTCATGGTAAAAACTTACTTGTATCGGGTCTTTATATTTCTTGTACCGAGGCCTCCACTCTTGACACCCATCTAACCCCATTGGTTACTACTGTCTACTGGTATCCGATCTTTTTTTTCTTCTTTTTGGACCCAAGTTAATAATAAATGGTACCGCTACTGATGTTCTACCAGTTGGTCAAGGCTAGTACACTCTTAGGTCCAGGTAACTACTCCCAATTGATCAAGGCTAGTACACATGACAGACTCTAGAACCCCCTCTTTGATTTTCGTGCTCAAGCGTTGCTTTGATAGTAATTGTTATAGACTAAATAGAAAACCTCAGCCTATTAAGGGAGGGAGAACCTGTCAATCTATAAACTCATACGTACACTCAATCGGGAGTCAAGTATTGGTTTGCAAGGATTCCTTTTAAGGTAAATAATAGAGTTGCTATATGTGACTTGCAAGTTCGTTGCCCATTATCTATGTACTTGGAAAAGCTCAAATTACCCTTAGTCTGCTGGAAACATCCTATTAGCCCTTTTAACTTGAGCAAGTACACCATACTTCAGTAGTCAGTACCATGTGATTGTTCTTACATTTGATGTAACTCTCACTTCTGTTCAGCTTTTTCTTTTCATTGCTATTGTTGTATCTTATCAGCCTTTCTCGAGTCTTAAAACTCCGACTTCTAAACTCAAAACTGGTTTGAAATGCCCATTTTGAGCTGGTTCAGGCTGATTGTTCCCGCTTATCTAGATTTCACTAATTGTGAGCTTCTGTTATTTTGGTCATTTCGATTACTGCATTGTGATGTTTACTGAACAGAGCATGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCTTAGCATCTGGTGCGTGAGCAATTTTTAATTTTGGGGCTTTGATACCATGTTTAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCCTAAGCCTTATAAAGAGTCCACCCATCTCATTAATCACCGATGTGGGACTTTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCGTGGACAATTTTACGCCCAGTGCGTGGACAATTTTAATTTTGGGGACCACAACATCGGGTGAGACGGACCCAGCTCTGATACCATGTGAAATTAGGTCTTAGGCCTAACTCACACCTCAAAAGCTAGCTCAAAGAGAGGAGGATTGCCTAAGCCTTATAAAGAATTCACCCATCTCATTAATCATCGATGTGAGACTTTTGTCATTCTTTAACAGAGCATATTAAAATGATCTAAATCGTGCAGGCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGTGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATCAGGGACGGACATTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGAGAGCAAATACAGGAGCTCATTGGTGAAATGAAAAAAATCCTTATTGACTGCTAG</genome_strand>
        <mrna_strand>GATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGTGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTANGCCCTTCTATTTGCATATTCGACACAATCAGGNACGGACATTTGGATTGTGCATGTGTTTATCCCTTCCCC-TGCATACTAGAGAGC-AATACAGGAGCTCATTGGTGAAATGAAAAAAATCC-TATTGACTGCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E249848" ref_strand="+" ref_description="SGN-E249848 [cLEF-57-K12]">
      <seq>gctggtgagttgtgagaaggaagaatgaaaaaggacagaattggaaatattgaaaaagaaggaggttggtttggggattgaaaaatatattccagatggtaaagcgagtaaaccattttgggcgcgtgggattgatatggtggggtatggtttgaattcattgagattttgtaatttgaagtttatggattcggaatcaacgagaggatcacaagttgtgaaattgcagttgaataaacaagagactgatcacattcttgatggctgtaaaacgagaggtataaaactgtgtggactattggctgctgctggattaattgcagctcattccttaaaaagcctaaaggagaatcaatgggagaagtatgcaattgtaacccttattaactgccgttcaattcttgatccagtgcttagccctgattttccaggcttttatcattctgccatcctcaacacgcatgacgttaagggaggagatgacttatgggagctagcaaaaagaagttacacatcttttatcaacgccaagaacaataacaagcatttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60442" stop="56099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60142" g_stop="59881" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59880" i_stop="58055" i_length="1826">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58054" g_stop="57886" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="431" r_length="169" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56519" g_stop="56399" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="552" r_length="121" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E249848" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60142" e_stop="59881"/>
          <exon e_start="58054" e_stop="57886"/>
          <exon e_start="56519" e_stop="56399"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGATGTAAGTTCTTCGCATTTTAGTAAATTTCTTACCTTTTTACGCATCTCGATTAATTTCATTTTATTTATGATTTTGTTCATCGAGACTTGATTAGATAAGAAGAAATCACATAGCACTTGTTAAGTCTTTGATAGTTTTTTTTGACAACACATTAATTTTAAACTTTTGCGCTTATTTCTTTTTTTTATAAATTTTATGTTTATTAAGGCTTGATTAGATAAGAAGAGATCACATACTCACTCGTTTCAATTTGTTTATTTTGTTATCTTTTTAGTCGTTTCAAATAAGAACGACTCTTTTTTCTTTTTTGGTTGACCTCTCATTAATTTTATTTTTCATGTGATATGTTTACTCACAAGATTAAAAGTTATTTTGATATATTTTATATATCTTTAATTTAAAATGATAGGAATCGATTTCTAAAACTATATTTTAAATTATAATCAGATAAATAAATTGAAACGGGAATAGTGTTTTTCTTAAGCTTCCTTAATTTAGAGCAAGATAGTGATATTCCTTTTTTTCTCTTTCAATAAATTTAATTGTCAGTGTGTTAAATATATATTTGATAATTGATAGAGAAACACTAATGTTTTACAAACTTAAAGAATTTAAAACTTTTAAAATACTATATTTAAGGAAGTATGTTAAGCCTATCTAAATTAAAAGGATTATTTTTGTCATTTTCTCGATGTATGGTGTGTTGTCTTTAATCATATATTTTTCTGACTTTATCATAATTAATTATAATTTCCTTAGTATTATTTGATAATGTATATTTTTCTCACTTAATCATAAATTAATTATAATATCCTTAGTGGTATATTAAAAATATGAAAATAGATATTATGGTTGAAATTTAAGTGGAGACAATACATTAGATGATTCAAATTTCTTTCTCTAGTATTGAAATCGAATTGGCAGAAAGTACCGAAAGTCGGCCTCCCGCCCTATCATCCCGTGTCTCAACCAATTTTTTTCTTGTCTCCAAATCTCTCTTTTGGCTTTTGAAACTTTGATTCGGTGCCTAAATTTTGATCGATAAAGTTATCTGGTATTTACCTAGATGGCAAATAGTAGGTATCTAATTGATAACGTTTGCAAACTGAGTTGAACATCATCGTCATACAAAAATAGATTTAAATGTCATTTTCAAATTGTCAAGTTAGGTTGACATTTTATTTTCATTTTCTTTAGAAATTAGGCAAAGCTACTCTATGAAAACTTGCTTGGCCCAATTTTCTTTTTTAGGTTAGTCTCATTTATGGCCCTCATTGAATATTCTCTTCACATGATGTCCAACTTTAATCATATTTGAATTGTGAATTGGCCAATTTGCATGCTACATCTTTCACATGACTAGAATCTGGCCTGATTGTGAGTAATGATATTACTAATTTTTCTAAAAATAACTCGTGGTGTTCGGGTCGACTAGTGGTTACCTCAGTACTTTCCATCTGCATGTGTATCAAGCAACTCTGTTCACCGAGAATGGTATAAACTAATACCGTTAAATCAAAAGATCCAATTCGGCTCAACTAAGATCAGGTTTATAGCCTGATTAATGGTTTAAATTTTATACATCGACAGTGCAAGATCACATTATTTAGAAGTTAGTTGTATGTAACTGCCTGTGATAAGTGTGTGCGACACTACAAAAATGTTGTTCGCCAATGTCAAATCTTCAAAAATTACATTACTTTATCCGAATGCACCTGAAAAACATTTTTGAAGAGTCTGAGCAACAGGTTACGACTCCCTATCTAAATGTACATTGTTTGCACTTTAGAGCATTAGAGGTAGTAACAAAATCTGAATTTTGGTAGGGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAGGTTCGTTAATGCATTCATGGTAAAAACTTACTTGTATCGGGTCTTTATATTTCTTGTACCGAGGCCTCCACTCTTGACACCCATCTAACCCCATTGGTTACTACTGTCTACTGGTATCCGATCTTTTTTTTCTTCTTTTTGGACCCAAGTTAATAATAAATGGTACCGCTACTGATGTTCTACCAGTTGGTCAAGGCTAGTACACTCTTAGGTCCAGGTAACTACTCCCAATTGATCAAGGCTAGTACACATGACAGACTCTAGAACCCCCTCTTTGATTTTCGTGCTCAAGCGTTGCTTTGATAGTAATTGTTATAGACTAAATAGAAAACCTCAGCCTATTAAGGGAGGGAGAACCTGTCAATCTATAAACTCATACGTACACTCAATCGGGAGTCAAGTATTGGTTTGCAAGGATTCCTTTTAAGGTAAATAATAGAGTTGCTATATGTGACTTGCAAGTTCGTTGCCCATTATCTATGTACTTGGAAAAGCTCAAATTACCCTTAGTCTGCTGGAAACATCCTATTAGCCCTTTTAACTTGAGCAAGTACACCATACTTCAGTAGTCAGTACCATGTGATTGTTCTTACATTTGATGTAACTCTCACTTCTGTTCAGCTTTTTCTTTTCATTGCTATTGTTGTATCTTATCAGCCTTTCTCGAGTCTTAAAACTCCGACTTCTAAACTCAAAACTGGTTTGAAATGCCCATTTTGAGCTGGTTCAGGCTGATTGTTCCCGCTTATCTAGATTTCACTAATTGTGAGCTTCTGTTATTTTGGTCATTTCGATTACTGCATTGTGATGTTTACTGAACAGAGCATGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCTTAGCATCTGGTGCGTGAGCAATTTTTAATTTTGGGGCTTTGATACCATGTTTAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCCTAAGCCTTATAAAGAGTCCACCCATCTCATTAATCACCGATGTGGGACTTTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCGTGGACAATTTTACGCCCAGTGCGTGGACAATTTTAATTTTGGGGACCACAACATCGGGTGAGACGGACCCAGCTCTGATACCATGTGAAATTAGGTCTTAGGCCTAACTCACACCTCAAAAGCTAGCTCAAAGAGAGGAGGATTGCCTAAGCCTTATAAAGAATTCACCCATCTCATTAATCATCGATGTGAGACTTTTGTCATTCTTTAACAGAGCATATTAAAATGATCTAAATCGTGCAGGCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCAC</genome_strand>
        <mrna_strand>GCTGGTGAGTTGTGAGAAGGAAGAATGAAAAAGGACAGAATTGGAAATATTGAAAAAGAAGGAGGTTGGTTTGGGGATTGAAAAATATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAAGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAAAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E449324" ref_strand="+" ref_description="SGN-E449324 [cSTS-6-I17]">
      <seq>cgctactgaaaaagttgctggagctggtgagtggggaagacggagaagggacagaattggaattattgaaaaagatggaggttggtttggggattgaagagtatattccagctggtaaagcgagtaagccattttgggcgcgtgggattgatatggtggggtatggattgaattcattgagattttctaatttgaagtttatggattcggaatcaacgagaggatcacaagttgtgaaattgcagttgaataaagaagaaactgatcgcattcttgatggctgcaaaacgagagatataaaactgtgtggactgttggctgctgctggattaattgcagctcattcctcaaaaggcctaaatgagaatcaatgggagaagtatgcaattgtaacccttattaactgccgttcaattcttgatccagtgcttagccctgattttccaggcttttatcattctgccatcctcaacacgcatgacgttaagggaggagatgatttatgggagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60424" stop="56156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60164" g_stop="59881" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59880" i_stop="58055" i_length="1826">
            <donor d_prob="0.987" d_score="0.94"/>
            <acceptor a_prob="0.968" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58054" g_stop="57886" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="447" r_length="169" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56519" g_stop="56456" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="511" r_length="64" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E449324" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449324" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60164" e_stop="59881"/>
          <exon e_start="58054" e_stop="57886"/>
          <exon e_start="56519" e_stop="56456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGATGTAAGTTCTTCGCATTTTAGTAAATTTCTTACCTTTTTACGCATCTCGATTAATTTCATTTTATTTATGATTTTGTTCATCGAGACTTGATTAGATAAGAAGAAATCACATAGCACTTGTTAAGTCTTTGATAGTTTTTTTTGACAACACATTAATTTTAAACTTTTGCGCTTATTTCTTTTTTTTATAAATTTTATGTTTATTAAGGCTTGATTAGATAAGAAGAGATCACATACTCACTCGTTTCAATTTGTTTATTTTGTTATCTTTTTAGTCGTTTCAAATAAGAACGACTCTTTTTTCTTTTTTGGTTGACCTCTCATTAATTTTATTTTTCATGTGATATGTTTACTCACAAGATTAAAAGTTATTTTGATATATTTTATATATCTTTAATTTAAAATGATAGGAATCGATTTCTAAAACTATATTTTAAATTATAATCAGATAAATAAATTGAAACGGGAATAGTGTTTTTCTTAAGCTTCCTTAATTTAGAGCAAGATAGTGATATTCCTTTTTTTCTCTTTCAATAAATTTAATTGTCAGTGTGTTAAATATATATTTGATAATTGATAGAGAAACACTAATGTTTTACAAACTTAAAGAATTTAAAACTTTTAAAATACTATATTTAAGGAAGTATGTTAAGCCTATCTAAATTAAAAGGATTATTTTTGTCATTTTCTCGATGTATGGTGTGTTGTCTTTAATCATATATTTTTCTGACTTTATCATAATTAATTATAATTTCCTTAGTATTATTTGATAATGTATATTTTTCTCACTTAATCATAAATTAATTATAATATCCTTAGTGGTATATTAAAAATATGAAAATAGATATTATGGTTGAAATTTAAGTGGAGACAATACATTAGATGATTCAAATTTCTTTCTCTAGTATTGAAATCGAATTGGCAGAAAGTACCGAAAGTCGGCCTCCCGCCCTATCATCCCGTGTCTCAACCAATTTTTTTCTTGTCTCCAAATCTCTCTTTTGGCTTTTGAAACTTTGATTCGGTGCCTAAATTTTGATCGATAAAGTTATCTGGTATTTACCTAGATGGCAAATAGTAGGTATCTAATTGATAACGTTTGCAAACTGAGTTGAACATCATCGTCATACAAAAATAGATTTAAATGTCATTTTCAAATTGTCAAGTTAGGTTGACATTTTATTTTCATTTTCTTTAGAAATTAGGCAAAGCTACTCTATGAAAACTTGCTTGGCCCAATTTTCTTTTTTAGGTTAGTCTCATTTATGGCCCTCATTGAATATTCTCTTCACATGATGTCCAACTTTAATCATATTTGAATTGTGAATTGGCCAATTTGCATGCTACATCTTTCACATGACTAGAATCTGGCCTGATTGTGAGTAATGATATTACTAATTTTTCTAAAAATAACTCGTGGTGTTCGGGTCGACTAGTGGTTACCTCAGTACTTTCCATCTGCATGTGTATCAAGCAACTCTGTTCACCGAGAATGGTATAAACTAATACCGTTAAATCAAAAGATCCAATTCGGCTCAACTAAGATCAGGTTTATAGCCTGATTAATGGTTTAAATTTTATACATCGACAGTGCAAGATCACATTATTTAGAAGTTAGTTGTATGTAACTGCCTGTGATAAGTGTGTGCGACACTACAAAAATGTTGTTCGCCAATGTCAAATCTTCAAAAATTACATTACTTTATCCGAATGCACCTGAAAAACATTTTTGAAGAGTCTGAGCAACAGGTTACGACTCCCTATCTAAATGTACATTGTTTGCACTTTAGAGCATTAGAGGTAGTAACAAAATCTGAATTTTGGTAGGGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAGGTTCGTTAATGCATTCATGGTAAAAACTTACTTGTATCGGGTCTTTATATTTCTTGTACCGAGGCCTCCACTCTTGACACCCATCTAACCCCATTGGTTACTACTGTCTACTGGTATCCGATCTTTTTTTTCTTCTTTTTGGACCCAAGTTAATAATAAATGGTACCGCTACTGATGTTCTACCAGTTGGTCAAGGCTAGTACACTCTTAGGTCCAGGTAACTACTCCCAATTGATCAAGGCTAGTACACATGACAGACTCTAGAACCCCCTCTTTGATTTTCGTGCTCAAGCGTTGCTTTGATAGTAATTGTTATAGACTAAATAGAAAACCTCAGCCTATTAAGGGAGGGAGAACCTGTCAATCTATAAACTCATACGTACACTCAATCGGGAGTCAAGTATTGGTTTGCAAGGATTCCTTTTAAGGTAAATAATAGAGTTGCTATATGTGACTTGCAAGTTCGTTGCCCATTATCTATGTACTTGGAAAAGCTCAAATTACCCTTAGTCTGCTGGAAACATCCTATTAGCCCTTTTAACTTGAGCAAGTACACCATACTTCAGTAGTCAGTACCATGTGATTGTTCTTACATTTGATGTAACTCTCACTTCTGTTCAGCTTTTTCTTTTCATTGCTATTGTTGTATCTTATCAGCCTTTCTCGAGTCTTAAAACTCCGACTTCTAAACTCAAAACTGGTTTGAAATGCCCATTTTGAGCTGGTTCAGGCTGATTGTTCCCGCTTATCTAGATTTCACTAATTGTGAGCTTCTGTTATTTTGGTCATTTCGATTACTGCATTGTGATGTTTACTGAACAGAGCATGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCTTAGCATCTGGTGCGTGAGCAATTTTTAATTTTGGGGCTTTGATACCATGTTTAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCCTAAGCCTTATAAAGAGTCCACCCATCTCATTAATCACCGATGTGGGACTTTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCGTGGACAATTTTACGCCCAGTGCGTGGACAATTTTAATTTTGGGGACCACAACATCGGGTGAGACGGACCCAGCTCTGATACCATGTGAAATTAGGTCTTAGGCCTAACTCACACCTCAAAAGCTAGCTCAAAGAGAGGAGGATTGCCTAAGCCTTATAAAGAATTCACCCATCTCATTAATCATCGATGTGAGACTTTTGTCATTCTTTAACAGAGCATATTAAAATGATCTAAATCGTGCAGGCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCT</genome_strand>
        <mrna_strand>CGCTACTGAAAAAGTTGCTGGAGCTGGTGAG-TG-G-G--G-AAGACGGAGAAGGGACAGAATTGGAATTATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGCTGGTAAAGCGAGTAAGCCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGATTGAATTCATTGAGATTTTCTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAAGAAGAAACTGATCGCATTCTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCAAAACGAGAGATATAAAACTGTGTGGACTGTTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTCAAAAGGCCTAAATGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGATTTATGGGAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E327500" ref_strand="+" ref_description="SGN-E327500 [cTOC-19-L18]">
      <seq>aaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccacaactcatggatgaacaccggcacttcatcagattccgacacggatatcttcttcgccagcatttatcaattagaaaacgaaaaatcggtgttcgctttaaggattcatacatcggtgtgtgatcgggcggctgcattggcggtgctgaagaagttattgaagctggtgagttgtgagaaggaagatgaagaagggacagaattggaaatattgaaaaagatggaggttggtttggggattgaagagtatattccagatggtaaagcgagtaaaccattttgggcgcgtgggattgatatggtggggtatggtttgaattcattgagattttgtaatttgaagtttatggattcggaatcaacgagaggatcacaagttgtgaaattgcagttgaataaacaagagactgatcacattcttgatggctgtaaaacgagaggtataaaactgtgtggactattggctgctgctggattaattgcagctcattccttaaaaggcctaaaagagaatcaatgggagaagtatgcaattgtaacccttattaactgccgttcaattcttgatccagtgcttagccctgattttccaggctttatcattctgccatcctcacacgcatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60665" stop="56185"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60365" g_stop="59881" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="485" r_length="485" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59880" i_stop="58055" i_length="1826">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58054" g_stop="57886" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="654" r_length="169" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56519" g_stop="56485" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="655" r_stop="687" r_length="33" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E327500" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60365" e_stop="59881"/>
          <exon e_start="58054" e_stop="57886"/>
          <exon e_start="56519" e_stop="56485"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGATGTAAGTTCTTCGCATTTTAGTAAATTTCTTACCTTTTTACGCATCTCGATTAATTTCATTTTATTTATGATTTTGTTCATCGAGACTTGATTAGATAAGAAGAAATCACATAGCACTTGTTAAGTCTTTGATAGTTTTTTTTGACAACACATTAATTTTAAACTTTTGCGCTTATTTCTTTTTTTTATAAATTTTATGTTTATTAAGGCTTGATTAGATAAGAAGAGATCACATACTCACTCGTTTCAATTTGTTTATTTTGTTATCTTTTTAGTCGTTTCAAATAAGAACGACTCTTTTTTCTTTTTTGGTTGACCTCTCATTAATTTTATTTTTCATGTGATATGTTTACTCACAAGATTAAAAGTTATTTTGATATATTTTATATATCTTTAATTTAAAATGATAGGAATCGATTTCTAAAACTATATTTTAAATTATAATCAGATAAATAAATTGAAACGGGAATAGTGTTTTTCTTAAGCTTCCTTAATTTAGAGCAAGATAGTGATATTCCTTTTTTTCTCTTTCAATAAATTTAATTGTCAGTGTGTTAAATATATATTTGATAATTGATAGAGAAACACTAATGTTTTACAAACTTAAAGAATTTAAAACTTTTAAAATACTATATTTAAGGAAGTATGTTAAGCCTATCTAAATTAAAAGGATTATTTTTGTCATTTTCTCGATGTATGGTGTGTTGTCTTTAATCATATATTTTTCTGACTTTATCATAATTAATTATAATTTCCTTAGTATTATTTGATAATGTATATTTTTCTCACTTAATCATAAATTAATTATAATATCCTTAGTGGTATATTAAAAATATGAAAATAGATATTATGGTTGAAATTTAAGTGGAGACAATACATTAGATGATTCAAATTTCTTTCTCTAGTATTGAAATCGAATTGGCAGAAAGTACCGAAAGTCGGCCTCCCGCCCTATCATCCCGTGTCTCAACCAATTTTTTTCTTGTCTCCAAATCTCTCTTTTGGCTTTTGAAACTTTGATTCGGTGCCTAAATTTTGATCGATAAAGTTATCTGGTATTTACCTAGATGGCAAATAGTAGGTATCTAATTGATAACGTTTGCAAACTGAGTTGAACATCATCGTCATACAAAAATAGATTTAAATGTCATTTTCAAATTGTCAAGTTAGGTTGACATTTTATTTTCATTTTCTTTAGAAATTAGGCAAAGCTACTCTATGAAAACTTGCTTGGCCCAATTTTCTTTTTTAGGTTAGTCTCATTTATGGCCCTCATTGAATATTCTCTTCACATGATGTCCAACTTTAATCATATTTGAATTGTGAATTGGCCAATTTGCATGCTACATCTTTCACATGACTAGAATCTGGCCTGATTGTGAGTAATGATATTACTAATTTTTCTAAAAATAACTCGTGGTGTTCGGGTCGACTAGTGGTTACCTCAGTACTTTCCATCTGCATGTGTATCAAGCAACTCTGTTCACCGAGAATGGTATAAACTAATACCGTTAAATCAAAAGATCCAATTCGGCTCAACTAAGATCAGGTTTATAGCCTGATTAATGGTTTAAATTTTATACATCGACAGTGCAAGATCACATTATTTAGAAGTTAGTTGTATGTAACTGCCTGTGATAAGTGTGTGCGACACTACAAAAATGTTGTTCGCCAATGTCAAATCTTCAAAAATTACATTACTTTATCCGAATGCACCTGAAAAACATTTTTGAAGAGTCTGAGCAACAGGTTACGACTCCCTATCTAAATGTACATTGTTTGCACTTTAGAGCATTAGAGGTAGTAACAAAATCTGAATTTTGGTAGGGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAGGTTCGTTAATGCATTCATGGTAAAAACTTACTTGTATCGGGTCTTTATATTTCTTGTACCGAGGCCTCCACTCTTGACACCCATCTAACCCCATTGGTTACTACTGTCTACTGGTATCCGATCTTTTTTTTCTTCTTTTTGGACCCAAGTTAATAATAAATGGTACCGCTACTGATGTTCTACCAGTTGGTCAAGGCTAGTACACTCTTAGGTCCAGGTAACTACTCCCAATTGATCAAGGCTAGTACACATGACAGACTCTAGAACCCCCTCTTTGATTTTCGTGCTCAAGCGTTGCTTTGATAGTAATTGTTATAGACTAAATAGAAAACCTCAGCCTATTAAGGGAGGGAGAACCTGTCAATCTATAAACTCATACGTACACTCAATCGGGAGTCAAGTATTGGTTTGCAAGGATTCCTTTTAAGGTAAATAATAGAGTTGCTATATGTGACTTGCAAGTTCGTTGCCCATTATCTATGTACTTGGAAAAGCTCAAATTACCCTTAGTCTGCTGGAAACATCCTATTAGCCCTTTTAACTTGAGCAAGTACACCATACTTCAGTAGTCAGTACCATGTGATTGTTCTTACATTTGATGTAACTCTCACTTCTGTTCAGCTTTTTCTTTTCATTGCTATTGTTGTATCTTATCAGCCTTTCTCGAGTCTTAAAACTCCGACTTCTAAACTCAAAACTGGTTTGAAATGCCCATTTTGAGCTGGTTCAGGCTGATTGTTCCCGCTTATCTAGATTTCACTAATTGTGAGCTTCTGTTATTTTGGTCATTTCGATTACTGCATTGTGATGTTTACTGAACAGAGCATGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCTTAGCATCTGGTGCGTGAGCAATTTTTAATTTTGGGGCTTTGATACCATGTTTAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCCTAAGCCTTATAAAGAGTCCACCCATCTCATTAATCACCGATGTGGGACTTTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCGTGGACAATTTTACGCCCAGTGCGTGGACAATTTTAATTTTGGGGACCACAACATCGGGTGAGACGGACCCAGCTCTGATACCATGTGAAATTAGGTCTTAGGCCTAACTCACACCTCAAAAGCTAGCTCAAAGAGAGGAGGATTGCCTAAGCCTTATAAAGAATTCACCCATCTCATTAATCATCGATGTGAGACTTTTGTCATTCTTTAACAGAGCATATTAAAATGATCTAAATCGTGCAGGCTTTTATCATTCTGCCATCCTCAACACGCATGAC</genome_strand>
        <mrna_strand>AAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAAGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-TTTATCATTCTGCCATCCTC-ACACGCATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E729967" ref_strand="+" ref_description="SGN-E729967 [LA22CF01]">
      <seq>acactatttcacttctccaaaatgcccttcacaaactccaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccacaactcatggatgaacaccggcacttcatcagattccgacacggatatcttcttcgccagcatttatcaattagaaaacgaaaaatcggtgttcgctttaaggattcatacatcggtgtgtgatcgggcggctgcattggcggtgctgaagaagttattgaagctggtgagttgtgagaaggaagatgaagaagggacagaattggaaatattgaaaaagatggaggttggtttggggattgaagagtatattccagatggtaaagcgagtaaaccattttgggcgcgtgggattgatatggtggggtatggtttgaattcattgagattttgtaatttgaagtttatggattcggaatcaacgagaggatcacaagttgtgaaattgcagttgaataaacaagagactgatcacattcttgatggctgtaaaacgagaggtataaaactgtgtggactattggctgctgctggattaattgcagctcattccttaaaaggcctaaaggagaatcaatgggagaagtatgcaattgtaacccttattaactgccgttccattcttgatccagtgcttagccctgattttccagggttttatcattctgcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60844" stop="56202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60544" g_stop="59881" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="665" r_length="665" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59880" i_stop="58055" i_length="1826">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58054" g_stop="57886" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="834" r_length="169" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56519" g_stop="56502" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="835" r_stop="852" r_length="18" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E729967" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>851</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60544" e_stop="59881"/>
          <exon e_start="58054" e_stop="57886"/>
          <exon e_start="56519" e_stop="56502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAC-ATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGATGTAAGTTCTTCGCATTTTAGTAAATTTCTTACCTTTTTACGCATCTCGATTAATTTCATTTTATTTATGATTTTGTTCATCGAGACTTGATTAGATAAGAAGAAATCACATAGCACTTGTTAAGTCTTTGATAGTTTTTTTTGACAACACATTAATTTTAAACTTTTGCGCTTATTTCTTTTTTTTATAAATTTTATGTTTATTAAGGCTTGATTAGATAAGAAGAGATCACATACTCACTCGTTTCAATTTGTTTATTTTGTTATCTTTTTAGTCGTTTCAAATAAGAACGACTCTTTTTTCTTTTTTGGTTGACCTCTCATTAATTTTATTTTTCATGTGATATGTTTACTCACAAGATTAAAAGTTATTTTGATATATTTTATATATCTTTAATTTAAAATGATAGGAATCGATTTCTAAAACTATATTTTAAATTATAATCAGATAAATAAATTGAAACGGGAATAGTGTTTTTCTTAAGCTTCCTTAATTTAGAGCAAGATAGTGATATTCCTTTTTTTCTCTTTCAATAAATTTAATTGTCAGTGTGTTAAATATATATTTGATAATTGATAGAGAAACACTAATGTTTTACAAACTTAAAGAATTTAAAACTTTTAAAATACTATATTTAAGGAAGTATGTTAAGCCTATCTAAATTAAAAGGATTATTTTTGTCATTTTCTCGATGTATGGTGTGTTGTCTTTAATCATATATTTTTCTGACTTTATCATAATTAATTATAATTTCCTTAGTATTATTTGATAATGTATATTTTTCTCACTTAATCATAAATTAATTATAATATCCTTAGTGGTATATTAAAAATATGAAAATAGATATTATGGTTGAAATTTAAGTGGAGACAATACATTAGATGATTCAAATTTCTTTCTCTAGTATTGAAATCGAATTGGCAGAAAGTACCGAAAGTCGGCCTCCCGCCCTATCATCCCGTGTCTCAACCAATTTTTTTCTTGTCTCCAAATCTCTCTTTTGGCTTTTGAAACTTTGATTCGGTGCCTAAATTTTGATCGATAAAGTTATCTGGTATTTACCTAGATGGCAAATAGTAGGTATCTAATTGATAACGTTTGCAAACTGAGTTGAACATCATCGTCATACAAAAATAGATTTAAATGTCATTTTCAAATTGTCAAGTTAGGTTGACATTTTATTTTCATTTTCTTTAGAAATTAGGCAAAGCTACTCTATGAAAACTTGCTTGGCCCAATTTTCTTTTTTAGGTTAGTCTCATTTATGGCCCTCATTGAATATTCTCTTCACATGATGTCCAACTTTAATCATATTTGAATTGTGAATTGGCCAATTTGCATGCTACATCTTTCACATGACTAGAATCTGGCCTGATTGTGAGTAATGATATTACTAATTTTTCTAAAAATAACTCGTGGTGTTCGGGTCGACTAGTGGTTACCTCAGTACTTTCCATCTGCATGTGTATCAAGCAACTCTGTTCACCGAGAATGGTATAAACTAATACCGTTAAATCAAAAGATCCAATTCGGCTCAACTAAGATCAGGTTTATAGCCTGATTAATGGTTTAAATTTTATACATCGACAGTGCAAGATCACATTATTTAGAAGTTAGTTGTATGTAACTGCCTGTGATAAGTGTGTGCGACACTACAAAAATGTTGTTCGCCAATGTCAAATCTTCAAAAATTACATTACTTTATCCGAATGCACCTGAAAAACATTTTTGAAGAGTCTGAGCAACAGGTTACGACTCCCTATCTAAATGTACATTGTTTGCACTTTAGAGCATTAGAGGTAGTAACAAAATCTGAATTTTGGTAGGGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAGGTTCGTTAATGCATTCATGGTAAAAACTTACTTGTATCGGGTCTTTATATTTCTTGTACCGAGGCCTCCACTCTTGACACCCATCTAACCCCATTGGTTACTACTGTCTACTGGTATCCGATCTTTTTTTTCTTCTTTTTGGACCCAAGTTAATAATAAATGGTACCGCTACTGATGTTCTACCAGTTGGTCAAGGCTAGTACACTCTTAGGTCCAGGTAACTACTCCCAATTGATCAAGGCTAGTACACATGACAGACTCTAGAACCCCCTCTTTGATTTTCGTGCTCAAGCGTTGCTTTGATAGTAATTGTTATAGACTAAATAGAAAACCTCAGCCTATTAAGGGAGGGAGAACCTGTCAATCTATAAACTCATACGTACACTCAATCGGGAGTCAAGTATTGGTTTGCAAGGATTCCTTTTAAGGTAAATAATAGAGTTGCTATATGTGACTTGCAAGTTCGTTGCCCATTATCTATGTACTTGGAAAAGCTCAAATTACCCTTAGTCTGCTGGAAACATCCTATTAGCCCTTTTAACTTGAGCAAGTACACCATACTTCAGTAGTCAGTACCATGTGATTGTTCTTACATTTGATGTAACTCTCACTTCTGTTCAGCTTTTTCTTTTCATTGCTATTGTTGTATCTTATCAGCCTTTCTCGAGTCTTAAAACTCCGACTTCTAAACTCAAAACTGGTTTGAAATGCCCATTTTGAGCTGGTTCAGGCTGATTGTTCCCGCTTATCTAGATTTCACTAATTGTGAGCTTCTGTTATTTTGGTCATTTCGATTACTGCATTGTGATGTTTACTGAACAGAGCATGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCTTAGCATCTGGTGCGTGAGCAATTTTTAATTTTGGGGCTTTGATACCATGTTTAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCCTAAGCCTTATAAAGAGTCCACCCATCTCATTAATCACCGATGTGGGACTTTTGTCATTCTTTAACACCCCACCTCACGCCCAGTGCGTGGACAATTTTACGCCCAGTGCGTGGACAATTTTAATTTTGGGGACCACAACATCGGGTGAGACGGACCCAGCTCTGATACCATGTGAAATTAGGTCTTAGGCCTAACTCACACCTCAAAAGCTAGCTCAAAGAGAGGAGGATTGCCTAAGCCTTATAAAGAATTCACCCATCTCATTAATCATCGATGTGAGACTTTTGTCATTCTTTAACAGAGCATATTAAAATGATCTAAATCGTGCAGGCTTTTATCATTCTGCCA</genome_strand>
        <mrna_strand>ACACTATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCCATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTTATCATTCTGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E578784" ref_strand="+" ref_description="SGN-E578784 [85905]">
      <seq>gccgccgcaactccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttctcgaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaattcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtggttgcgttaaggattcatacatcggcgtgcgatcgggcggcatcgttggcgctactgaaaaagttgctggagctggtgagtggggaagacggagaagggacagaattggaattattgaaaaagatggaggttggtttggggattgaagagtatattccagctggtaaagcgagtaagccattttgggcgcgtgggattgatatggtggggtatggattgaattcattgagattttctaatttgaagtttatggattcggaatcaacgagaggatcacaagttgtgaaattgcagttgaataaaagaaggaaactgatcgcattcttgatggtgcaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60969" stop="59600"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60669" g_stop="59881" g_length="789"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="785" r_length="785" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E578784" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E578784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60669" e_stop="59881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAAT-AAACAA-GAGACTGATCACATTCTTGAT</genome_strand>
        <mrna_strand>GCCGCCGCAACTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAATTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTGGTTGCGTTAAGGATTCATACATCGGCGTGCGATCGGGCGGCATCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGAGAAGGGACAGAATTGGAATTATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGCTGGTAAAGCGAGTAAGCCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGATTGAATTCATTGAGATTTTCTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAAAGAAGGAAACTGATCGCATTCTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E268607" ref_strand="+" ref_description="SGN-E268607 [cLEI-13-B10]">
      <seq>aaggattcatacatcggtgtgtgatcgggcgggtgcattgggggtgctgaagaagttattgaagctggtgagttgtgagaaggaagatgaataatggacagaattggaaatattgaaaaagatggaggttggtttggggattgaagagtatattccaaatggtaaagcgagtgaaccattttgggcgcgtgggattgatatggtggggtatggttggaattcattgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60505" stop="59677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60205" g_stop="59977" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E268607" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>229</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268607" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60205" e_stop="59977"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGA</genome_strand>
        <mrna_strand>AAGGATTCATACATCGGTGTGTGATCGGGCGGGTGCATTGGGGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAATAATGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAAATGGTAAAGCGAGTGAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTGGAATTCATTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E412047" ref_strand="+" ref_description="SGN-E412047 [STM-15-N1]">
      <seq>ccgcaactccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttctcgaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaattcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtggttgcgttaaggattcatacatcggcgtgcgatcgggcggcatcgttggcgctactgaaaaagttgctggagctggtgagtggggaagacggagaagggacagaattggaattattgaaaaagatggaggttggtttggggattgaagagtatattccagcttgtaaagcgagtaagccattttgggcgcgtgggattgatatggtggggtatggattgaattcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60965" stop="59680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60665" g_stop="59980" g_length="686"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="680" r_length="680" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E412047" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E412047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60665" e_stop="59980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTG</genome_strand>
        <mrna_strand>CCGCAACTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAATTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTGGTTGCGTTAAGGATTCATACATCGGCGTGCGATCGGGCGGCATCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGAGAAGGGACAGAATTGGAATTATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGCTTGTAAAGCGAGTAAGCCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGATTGAATTCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E561642" ref_strand="+" ref_description="SGN-E561642 [17920]">
      <seq>ccatttagctaatctctcagtcatggctgaacaagggaagcgccgccgcagctccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttttccaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaattcagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtcgtcgcgttaaggattcatacatcggcgtgtgatcgggcagcagcgttggcgctactgaaaaagttgctggagctggtgagtggggaagacggagaagggacagaattggaattattgaaacaagatggaggttggtttggggattgaagagtatattccagctggtaaagcgagtaagccattttgggcgcgtgggattgatatggtggggtatggattgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="61009" stop="59687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60709" g_stop="59987" g_length="723"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="719" r_length="719" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E561642" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561642" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60709" e_stop="59987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTTAGCTAATCTCTCAGTAATGGCTGAGCAA-GGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAA-AAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAA</genome_strand>
        <mrna_strand>CCATTTAGCTAATCTCTCAGTCATGGCTGAACAAGGGAAGCGCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTTTCCAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATTCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTCGTCGCGTTAAGGATTCATACATCGGCGTGTGATCGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGAGAAGGGACAGAATTGGAATTATTGAAACAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGCTGGTAAAGCGAGTAAGCCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E370074" ref_strand="+" ref_description="SGN-E370074 [TUS-26-P12]">
      <seq>aaggattcatacatcggtgtgtgatcgggcggctgcattggcggtgctgaagaagttattgaagctggtgagttgtgagaaggaagatgaagaagggacagaattggaaatattgaaaaagatggaggttggtttggggattgaagagtatattccagatggtaaagcgagtaaaccattttgggcgcgtgggattgatatggtggggtatggtttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60505" stop="59687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60205" g_stop="59987" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E370074" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>219</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370074" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60205" e_stop="59987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAA</genome_strand>
        <mrna_strand>AAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E559263" ref_strand="+" ref_description="SGN-E559263 [18732]">
      <seq>tttagctaatctctcagtcatggctgagcaaggaagcgccgccgcaactccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttctcgaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaattcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtggttgcgttaaggattcatacatcggcgtgcgatcgggcggcatcgttggcgctactgaaaaagttgctggagctggtgagtggggaagacggagaagggacagaattggaattattgaaaaagatggaggttggtttggggattgaagagtatattccagctggtaaagcgagtaagccattttgggcgcgtgggattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="61006" stop="59708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60706" g_stop="60008" g_length="699"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="693" r_length="693" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E559263" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559263" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60706" e_stop="60008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGCTAATCTCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGA</genome_strand>
        <mrna_strand>TTTAGCTAATCTCTCAGTCATGGCTGAGCAAGGAAGCGCCGCCGCAACTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAATTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTGGTTGCGTTAAGGATTCATACATCGGCGTGCGATCGGGCGGCATCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGAGAAGGGACAGAATTGGAATTATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGCTGGTAAAGCGAGTAAGCCATTTTGGGCGCGTGGGATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E570551" ref_strand="+" ref_description="SGN-E570551 [15153]">
      <seq>ctcccatttagctaatctctcagtcatggctgagcaaggacgcgccgccgcatctccgccgtctgagttgaaaatccggccggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttctccaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccggaactcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcgattagaaaacgagaaatcagtgttcgcgttaaggattcatacatcggcgtgtgatcgggcagcagcgttggcgctactgaaaaagttgctggagctggtgagtggggaagacggagaagggacagaattggaattattgaaaaagatggaggttggtttggggattgaagagtatattccagctggtaaagcgagtaaggcatttggggcgcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="61011" stop="59717"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60712" g_stop="60017" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="690" r_length="690" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E570551" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E570551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60712" e_stop="60017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCCATTTAGCTAATCTCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCG</genome_strand>
        <mrna_strand>CTCCCATTTAGCTAATCTCTCAGTCATGGCTGAGCAAGGACGCGCCGCCGCATCTCCGCCGTCTGAGTTGAAAATCCGGCCGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCGGAACTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCGATTAGAAAACGAGAAATCAGTGTTCGCGTTAAGGATTCATACATCGGCGTGTGATCGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGAGAAGGGACAGAATTGGAATTATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGCTGGTAAAGCGAGTAAGGCATTTGGGGCGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E558594" ref_strand="+" ref_description="SGN-E558594 [17958]">
      <seq>tcccatttagcctaatctctcagtcatggctgaacaaggaagcgccgccgcagctccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttttccaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaattcagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtcgtcgcgttaaggattcatacatcggcgtgtgatcgggcagcagcgttggcgctactgaaaaagttgctggagctggtgagtggggaagacggagaagggacagaattggaattattgaacaaagatggaggtggttcggggattgaagagtatattccagctgggtaaaagcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="61011" stop="59735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60711" g_stop="60035" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="674" r_length="674" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E558594" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558594" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60711" e_stop="60035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCATTTAG-CTAATCTCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAA-AAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGAT-GGT-AAAGCGAG</genome_strand>
        <mrna_strand>TCCCATTTAGCCTAATCTCTCAGTCATGGCTGAACAAGGAAGCGCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTTTCCAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATTCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTCGTCGCGTTAAGGATTCATACATCGGCGTGTGATCGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGAGAAGGGACAGAATTGGAATTATTGAACAAAGATGGAGG-TGGTTCGGGGATTGAAGAGTATATTCCAGCTGGGTAAAAGCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E409197" ref_strand="+" ref_description="SGN-E409197 [PPI-13-K6]">
      <seq>ttagctaatctctcagtcatggctgaacaaggaagcgccgccgcagctccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttttccaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaattcagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtcgtcgcgttaaggattcatacatcggcgtgtgatcgggcagcagcgttggcgctactgaaaaagttgctggagctggtgagtggggaagacggagaagggacagaattggattattgaaaagatggaggttgggttggggattgaagatatattccagctggtaagcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="61005" stop="59735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60705" g_stop="60035" g_length="671"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E409197" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E409197" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60705" e_stop="60035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCTAATCTCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAG</genome_strand>
        <mrna_strand>TTAGCTAATCTCTCAGTCATGGCTGAACAAGGAAGCGCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTTTCCAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATTCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTCGTCGCGTTAAGGATTCATACATCGGCGTGTGATCGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGAGAAGGGACAGAATTGG-ATTATTG-AAAAGATGGAGGTTGGGTTGGGGATTGAAGA-TATATTCCAGCTGGT-AAGCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E453227" ref_strand="+" ref_description="SGN-E453227 [cSTS-19-E24]">
      <seq>tctcagtcatggctgaacaaggaagcgccgccgcagctccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttttccaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaattcagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtcgtcgcgttaaggattcatacatcggcgtgtgatcgggcagcagcgttggcgctactgaaaaagttgctggagctggtgagtggggaagacggagaagggacagaattggaattattgaaaaagatggaggttgggtttgggattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60995" stop="59763"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60695" g_stop="60063" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="627" r_length="627" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E453227" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60695" e_stop="60063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTG</genome_strand>
        <mrna_strand>TCTCAGTCATGGCTGAACAAGGAAGCGCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTTTCCAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATTCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTCGTCGCGTTAAGGATTCATACATCGGCGTGTGATCGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGAGAAGGGACAGAATTGGAATTATTGAAAAAGATGGAGGTTGGGTTTGGGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E311377" ref_strand="+" ref_description="SGN-E311377 [cLEZ-18-F4]">
      <seq>tctcagtaatggctgagcaaggaagcgccgccgcagctccgtcgtctgagttgaaaagtcggccggccggaagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttgtcaaaaccaccagacatttcacttctccaaaatgcccttcacaaactccaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccacaactcatggatgaacaccggcacttcatcagattccgacacggatatcttcttcgccagcatttatcaattagaaaacgaaaaatcggtgttcgctttaaggattcatacatcggtgtgtgatcgggcggctgcattggcggtgctgaagaagttattgaagctggtgagttgtgagaaggaagatgaagaagggacagaattggaaatattgaaaaagatggaggttggtttggggattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60995" stop="59763"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60695" g_stop="60063" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="633" r_length="633" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E311377" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60695" e_stop="60063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTG</genome_strand>
        <mrna_strand>TCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E484042" ref_strand="+" ref_description="SGN-E484042 [cSTE-11-J22]">
      <seq>cacttagctaatctctcagtcacggctgagcaaggaaacgcccgccgcagctccgccgtctgagttgaaaatccgtccggctggaagcaccgagcacaagctggtgcaagggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttctcgaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcatggataaacaccggtacttcatcagattccgacacggatattttcttcgcaagcatttatcaattagaaaacgagaaattggtcgtcgcattaaggattcataccatcggcgtgtgatcgggcagcagcgttggcgctactgaaaaagttgctggagctggtgagtgggggaagacggagaagggacagaattggaattattgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="61008" stop="59814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60708" g_stop="60088" g_length="621"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="620" r_length="620" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E484042" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E484042" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60708" e_stop="60088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTAGCTAATCTCTCAGTAATGGCTGAGCAAGGAAGCG-CCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCAC-AGCTGGTGCAA-GGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATA-CATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAA</genome_strand>
        <mrna_strand>CACTTAGCTAATCTCTCAGTCACGGCTGAGCAAGGAAACGCCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGTCCGGCTGGAAGCACCGAGCACAAGCTGGTGCAAGGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGTACTTCATCAGATTCCGACACGGATATTTTCTTCGCAAGCATTTATCAATTAGAAAACGAGAAATTGGTCGTCGCATTAAGGATTCATACCATCGGCGTGTGATCGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGAG-TG-G-G--GGAAGACGGAGAAGGGACAGAATTGGAATTATTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E417993" ref_strand="+" ref_description="SGN-E417993 [STM-26-L19]">
      <seq>atctctcagtcatggctgagcaaggaaacgccgccgcagctccgccgtctgagttgaaaatccgtccggctggaagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttctcgaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcatggataaacaccggtacttcatcagattccgacacggatattttcttcgcaagcatttatcaattagaaaacgagaaattggtcgtcgcattaaggattcatacatcggcgtgtgatcgggcagcagcgttggcgctactgaaaaagttgctggagctggtgagtggggaagacggagaanggacagaattggaattattgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60998" stop="59819"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60698" g_stop="60088" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E417993" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E417993" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60698" e_stop="60088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAA</genome_strand>
        <mrna_strand>ATCTCTCAGTCATGGCTGAGCAAGGAAACGCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGTCCGGCTGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGTACTTCATCAGATTCCGACACGGATATTTTCTTCGCAAGCATTTATCAATTAGAAAACGAGAAATTGGTCGTCGCATTAAGGATTCATACATCGGCGTGTGATCGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGAGAANGGACAGAATTGGAATTATTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E423811" ref_strand="+" ref_description="SGN-E423811 [STM-42-J9]">
      <seq>ctcagtcatggctgaacaaggaagcgccgccgcagctccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttttccaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaattcagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtcgtcgcgttaaggattcatacatcggcgtgtgatcgggcagcagcgttggcgctactgaaaaagttgctggagctggtgagtggggaagacggagaagggacagaattggaattattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60994" stop="59791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60694" g_stop="60091" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="598" r_length="598" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E423811" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60694" e_stop="60091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTG</genome_strand>
        <mrna_strand>CTCAGTCATGGCTGAACAAGGAAGCGCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTTTCCAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATTCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTCGTCGCGTTAAGGATTCATACATCGGCGTGTGATCGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGAGAAGGGACAGAATTGGAATTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E583188" ref_strand="+" ref_description="SGN-E583188 [9009]">
      <seq>ctaatctctcagtcatggctgagcaaggaagcgccgccgcaactccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttctcgaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaattcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcacttagaaaacgagaaatcggtggttgcgttaaggattcatacatcggcgtgcgatcgggcggcatcgttggggctactgaaacagttgctggagctggtgagtggggaagacggaaagggacagaattggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="61001" stop="59812"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60701" g_stop="60097" g_length="605"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="598" r_length="598" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E583188" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60701" e_stop="60097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATCTCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAA</genome_strand>
        <mrna_strand>CTAATCTCTCAGTCATGGCTGAGCAAGGAAGCGCCGCCGCAACTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAATTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCACTTAGAAAACGAGAAATCGGTGGTTGCGTTAAGGATTCATACATCGGCGTGCGATCGGGCGGCATCGTTGGGGCTACTGAAACAGTTGCTGGAGCTGGTGA---GTG-G--GGAAGACGGA-AAGGGACAGAATTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E558370" ref_strand="+" ref_description="SGN-E558370 [17700]">
      <seq>gggctgcaggcccatttagctaatctctcagtcatggctgaacaagggaagcgccgccgcagctccggcgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaagcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttttccaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaattcagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtcgtcgcgttaaggattcatacatcggcgtgtgatcgggcagcagcgttggcgctactgaaaaagttgctggagctggtgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="61016" stop="59833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60701" g_stop="60133" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="589" r_length="570" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E558370" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60701" e_stop="60133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATCTCTCAGTAATGGCTGAGCAA-GGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGT</genome_strand>
        <mrna_strand>CTAATCTCTCAGTCATGGCTGAACAAGGGAAGCGCCGCCGCAGCTCCGGCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAAGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTTTCCAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATTCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTCGTCGCGTTAAGGATTCATACATCGGCGTGTGATCGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E557243" ref_strand="+" ref_description="SGN-E557243 [20977]">
      <seq>catggctgaacaaggaagcgccgccgcagctccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttttccaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaattcagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtcgtcgcgttaaggattcatacatcggcgtgtgatcgggcagcagcgttggcgctactgaaaaagttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60987" stop="59849"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60688" g_stop="60147" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E557243" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E557243" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60688" e_stop="60147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTAT</genome_strand>
        <mrna_strand>CATGGCTGAACAAGGAAGCGCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTTTCCAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATTCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTCGTCGCGTTAAGGATTCATACATCGGCGTGTGATCGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E568163" ref_strand="+" ref_description="SGN-E568163 [12402]">
      <seq>ccatttagctaatctctcagtcatggctgagcaagggaagcgccgccgcaactccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttctcgaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaattcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtggttgcgtcaaggattcatacatcggggtgcgatccggcggcatcgttggcgctactgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="61009" stop="59855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60709" g_stop="60154" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E568163" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E568163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60709" e_stop="60154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTTAGCTAATCTCTCAGTAATGGCTGAGCAA-GGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAG</genome_strand>
        <mrna_strand>CCATTTAGCTAATCTCTCAGTCATGGCTGAGCAAGGGAAGCGCCGCCGCAACTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAATTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTGGTTGCGTCAAGGATTCATACATCGGGGTGCGATCCGGCGGCATCGTTGGCGCTACTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E580900" ref_strand="+" ref_description="SGN-E580900 [6143]">
      <seq>ggaagcgccgccgcaactccgccgtctgagttgaaaatccggctggctggtagcaccggagcacagctggtgcaaggcggttcccggttggcacaggtataacagtcttagctctactcttatcaaaaccaccaagacattttcacttctcgaaaatgcccttcacaaacttcaaaatttccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccggacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcggaacacgaaatcaaccagaattcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaagttagaaaacgagaaatcgggtggttgcgttaaggattcatacatcggcggtgcgatcgggcggcatcgttggcgcctactgaanaaagttgctggaagctgggtgagtggggaagacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60975" stop="59863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60675" g_stop="60163" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="523" r_length="523" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E580900" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="0.905" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E580900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60675" e_stop="60163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACC-GAGCACAGCTGGTGCAAGGCGGTTCCCGG-TGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACC-AGACA-TTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAA-TTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCC-GACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTC-GAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAA-TTAGAAAACGAAAAATC-GGTGTTCGCTTTAAGGATTCATACATCGG-TGTGTGATCGGGCGGCTGCATTGGCG</genome_strand>
        <mrna_strand>GGAAGCGCCGCCGCAACTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGGAGCACAGCTGGTGCAAGGCGGTTCCCGGTTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAAGACATTTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGGAACACGAAATCAACCAGAATTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAAGTTAGAAAACGAGAAATCGGGTGGTTGCGTTAAGGATTCATACATCGGCGGTGCGATCGGGCGGCATCGTTGGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E584212" ref_strand="+" ref_description="SGN-E584212 [10033]">
      <seq>tccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaattcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaacgagaaatcggtggttgcgttaaggattcatacatcggcgtgcgatcgggcggcatcgttggcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60732" stop="59863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60432" g_stop="60163" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E584212" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>270</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60432" e_stop="60163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCG</genome_strand>
        <mrna_strand>TCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAATTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTGGTTGCGTTAAGGATTCATACATCGGCGTGCGATCGGGCGGCATCGTTGGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E269714" ref_strand="+" ref_description="SGN-E269714 [cLEM-17-M16]">
      <seq>gctgagcaaggaagcgccgccgcagctccgtcgtctgagttgaaaagtcggccggccggaagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttgtcaaaaccaccagacatttcacttctccaaaatgcccttcacaaactccaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctgcgtctccgattttcatctcatcctcgaacacgaaatcaaccacaactcatggatgaacaccggcacttcatcagattccgacacggatatcttcttcgccagcatttatcaattagaaaacgaaaaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60984" stop="59918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60684" g_stop="60218" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="467" r_length="467" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E269714" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269714" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60684" e_stop="60218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATC</genome_strand>
        <mrna_strand>GCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTGCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E208592" ref_strand="+" ref_description="SGN-E208592 [cLEC-39-N20]">
      <seq>atggctgagcaaggaagcgccgccgcagctccgtcgtctgagttgaaaagtcggccggccggaagcaccgagcacagctggtgcaaggcggtttccggtggcacaggtataacagtcttagctctactcttgtcaaaaccaccagacatttcacttctccaaaatgcccttcacaaactccaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattgctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattcttcgacgcctcaaaacctacgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcgaccacaactcatggatgaacaccggcacttcatcagattccgacacggatatctttttcgccagcatttatcaattagaaaacgaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60987" stop="59920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60687" g_stop="60220" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="468" r_length="468" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E208592" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208592" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60687" e_stop="60220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAA</genome_strand>
        <mrna_strand>ATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTTCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTGCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTTCGACGCCTCAAAACCTACGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCGACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTTTTCGCCAGCATTTATCAATTAGAAAACGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E447505" ref_strand="+" ref_description="SGN-E447505 [cSTA-26-F16]">
      <seq>atctctcagtcatggctgagcaaggaaacgccgccgcagctccgccgtctgagttgaaaatccgtccggctggaagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttctcgaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcatggataaacaccggtacttcatcagattccgacacggatattttcttcgcaagcatttatcaattagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60998" stop="59927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60698" g_stop="60227" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E447505" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E447505" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60698" e_stop="60227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAA</genome_strand>
        <mrna_strand>ATCTCTCAGTCATGGCTGAGCAAGGAAACGCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGTCCGGCTGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGTACTTCATCAGATTCCGACACGGATATTTTCTTCGCAAGCATTTATCAATTAGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E469985" ref_strand="+" ref_description="SGN-E469985 [cSTB-16-I15]">
      <seq>ctctactcttatcaaaaccaccagacatttcacttctcgaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcaccaaattcctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaattcatggataaacaccggcacttcatcagattccgacacggatattttcttcgcgagcatttatcaattagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60866" stop="59927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60566" g_stop="60227" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E469985" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>340</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E469985" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60566" e_stop="60227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCA-CAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAA</genome_strand>
        <mrna_strand>CTCTACTCTTATCAAAACCACCAGACATTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACCAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAATTCATGGATAAACACCGGCACTTCATCAGATTCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E584213" ref_strand="+" ref_description="SGN-E584213 [10034]">
      <seq>cagtcttagctctactcttatcaaaaccaccagatatttcacttctcgaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaacttctttacgaatcaagcacaaatccctactcttacatcattccctccacttctcatcttcaaatccagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaattcatggataaacacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="60875" stop="59986"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60575" g_stop="60286" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E584213" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584213" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60575" e_stop="60286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACC</genome_strand>
        <mrna_strand>CAGTCTTAGCTCTACTCTTATCAAAACCACCAGATATTTCACTTCTCGAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTTCTTTACGAATCAAGCACAAATCCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAATTCATGGATAAACACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E444707" ref_strand="+" ref_description="SGN-E444707 [cSTA-43-L6]">
      <seq>ctaatctctcagtcatggctgaacaaggaagcgccgccgcagctccgccgtctgagttgaaaatccggctggctggtagcaccgagcacagctggtgcaaggcggttcccggtggcacaggtataacagtcttagctctactcttatcaaaaccaccagacatttcacttttccaaaatgcccttcacaaacttcaaaattccaatcctatcctcaaatctcaactccattacgaatcaagcacaaattcctactcttacatcattccctccacttctcatcttcaaattcagccgttcgatctctcatcaacggttcagattctccgacgcctcaaaacctccgatctcacctccgtctccgattttcatctcatcctcgaacacgaaatcaaccagaactcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="61001" stop="59997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60701" g_stop="60297" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E444707" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60701" e_stop="60297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATCTCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCAT</genome_strand>
        <mrna_strand>CTAATCTCTCAGTCATGGCTGAACAAGGAAGCGCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGGCTGGCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGACATTTCACTTTTCCAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATTCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E264052" ref_strand="-" ref_description="SGN-E264052 [cLEG-64-A15]">
      <seq>acatcagaatcattgggtagatgttcctcctactcccggagctctcgtggtcaatataggagatattctacagcttataacgaatgacaagttcaaaagtgttgatcatagagtactggctaataaggtcggtccaagggtatcgttggcatgcttcttcatgacaaactttgtggcaacacaaaggctgtatggacctataaaggagctgatatcggaacagaatcctccaaactacagggaaacgacgattaaggagttcacaactcatttcaataacaaagggctggatggcacttccactctgttgcattttagactttagactaaattgttcaaataaggttttgtaatactatatatgtcaaactaagtatgctcattatgtaaccatcaataaattctactcatagtaagtaattttcatgattatgtttagattaaaaaaaaaaaaaaaaaaagactagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="62619" stop="1834"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62319" g_stop="62247" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62246" i_stop="62168" i_length="79">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.897" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62167" g_stop="61790" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="451" r_length="378" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61789" i_stop="60808" i_length="982">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60807" g_stop="60796" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="463" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60795" i_stop="60702" i_length="94">
            <donor d_prob="0.956" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60701" g_stop="60697" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="468" r_length="5" r_score="0.800"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E264052" ref_strand="-">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264052" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="62319" e_stop="62247"/>
          <exon e_start="62167" e_stop="61790"/>
          <exon e_start="60807" e_stop="60796"/>
          <exon e_start="60701" e_stop="60697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATCAGAATCATTGGGTAGATGTTCCTCCTACTCCCGGAGCTCTCGTGGTCAATATAGGAGATATTCTACAGGCAAGTAGTGTTACATTTAAACATATACCTGTATCAGAAACATACATTTCTTATCACTTATGAACTCGATCATTTTCAGCTTATAACGAATGACAAGTTCAAAAGTGTTGATCATAGAGTACTGGCTAATAAGGTCGGTCCAAGGGTATCGTTGGCATGCTTCTTCATGACAAACTTTGTGGCAACACAAAGGCTGTATGGACCTATAAAGGAGCTGATATCGGAACAGAATCCTCCAAACTACAGGGAAACGACGATTAAGGAGTTCACAACTCATTTCAATAACAAAGGGCTGGATGGCACTTCCACTCTGTTGCATTTTAGACTTTAGACTAAATTGTTCAAATAAGGTTTTGTAATACTATATATGTCAAACTAAGTATGCTCATTATGTAACCATCAATAAATTCTACTCATAGTAAGTAATTTTCATGATTATGTTTAGATTCATCGCTAAGTTTTTCGCTTCTACCTTTCTTAAGAATATTATTGCATGGGCGAATTTACGTATATACACGCGAGTGTATAAGCACTTGTTAATTTCAAAATAAAATCATACAAATATATGTGTATATAAATTGATCTCGTTTTTTTTTTTTTAACAAAAAAGAATCAAATTTGACATCATCATATCCCAATGCTTTGGTTGGTAAATGAGTCCAAAGTTTATAGTTGTCATGCTTTCTTCTTTTCTTACCCATTAACATTATATTTTAAAATTAAATTGATATTTTGTTTATTTTTTAAAATTTTCCATCAAGCTTAATATTATTGTATCTCCTTGCTCCGATAGATAAATGAATTTAAAACGGAAAACAAGATAAATATATTGTTGAACTATTTTAAATGATATACGAATATTCTTCGTTGTATTTTCAGGACATTGGTGCTGTTATTGTCTAAAAACTAGAGCATATATATCCTCCACTCTAACGGAAGACTAAATAGAGACACGTGACACAATCTTATCTATTGATAAATATCGAATCAGTAAATAAGATTATGACACGTGTGTTAGGATCGAATTCATACATACACACACTTGATGAATAAATAACACAAGAACTTTAGAGAGAAAGAGATGAGAGATCTAGAGAGAGAAAGAGAGAAGCCAATATTTCGTGGTAATACTCCGTGAGTAAACTTCTACGGCGTTGAGGTATATATATTAATAAATAAGAGTATATTTTAGTTACAGATAATATATGAAGAATAAATAGTAAAGCCTAAAATATATTAATCAGACTCTACAACCTAACAATGTGTATATCTATTAGTATAAAGTATATATATATATTCTAGTTTTTGAACGGCAAGAAAACTAATGTTCCAAAAGTATGAGGAATGTATCATTTATGATAGTTTAAAATATATTTATTTTTTTCTCATTTAAATAATCTCGAGATAATTTAATCTGAAAACCAAATCACGTGACATGGAAAAAAAAAAGAGTAATCAAACTTTTCTTAATCATTAATTTTATCACTTAAAGAATATGTATAAATAAGTGGTTAGGCTTCATTTGTACTTTTCATTCCCATTTAGCTAAT</genome_strand>
        <mrna_strand>ACATCAGAATCATTGGGTAGATGTTCCTCCTACTCCCGGAGCTCTCGTGGTCAATATAGGAGATATTCTACAG...............................................................................CTTATAACGAATGACAAGTTCAAAAGTGTTGATCATAGAGTACTGGCTAATAAGGTCGGTCCAAGGGTATCGTTGGCATGCTTCTTCATGACAAACTTTGTGGCAACACAAAGGCTGTATGGACCTATAAAGGAGCTGATATCGGAACAGAATCCTCCAAACTACAGGGAAACGACGATTAAGGAGTTCACAACTCATTTCAATAACAAAGGGCTGGATGGCACTTCCACTCTGTTGCATTTTAGACTTTAGACTAAATTGTTCAAATAAGGTTTTGTAATACTATATATGTCAAACTAAGTATGCTCATTATGTAACCATCAATAAATTCTACTCATAGTAAGTAATTTTCATGATTATGTTTAGATTAAAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAGA..............................................................................................CTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E344752" ref_strand="+" ref_description="SGN-E344752 [cTOF-21-F19]">
      <seq>ttttacttcaaatatcagctaagaaaaaaatggagttgatcaacacaactgaagtccaggttccaagagaagcaaagtatgacaggaaggctgaactacaagcttttgatgagacgaaaaccggtgttaagggactagtcgatacaggtatcactaaagtaccaagaatgtttgttcaaccgtcaaggattgaagattcaacaattcacagcaacaagaagttcagttttccaataattgatcttgatggtatcaaggaaaattcgatcaaacgaaagaacatagtccaggaagtcggtcaagcatccgagacttggggattctttcaagtgatcaatcatgggattcctagtcatcttctggaggaaatgaaagacggtgttctcagtttctttgaacaagataccgaggagaagaaacagtggtatacgcgagatttgacaaaagtgtttacgtttaacagcaatttcgacctgtttggagcaccagtaaccaactggagagacacttttactgctaccacagctcctatacctccaaaacctgaagaattaccttctgtttgcagggatgttctccttgagtacacaaaccaagtgatgaaattaggtgatactctatttgaaatactggctgaagctattggcctcgaaccaaatacctcaggacatggggttgtgccgaggggctaatggcgttaggccattattatccagcatgcccacaccagaactaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="63590" stop="62098"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63290" g_stop="62723" g_length="568"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62722" i_stop="62569" i_length="154">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62568" g_stop="62398" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="569" r_stop="737" r_length="169" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E344752" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344752" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63290" e_stop="62723"/>
          <exon e_start="62568" e_stop="62398"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTACTTCAAATATCAGCTAAGAAAAAAATGGAGTTGATCAACACAACTGAAGTCCAGGTTCCAAGAGAAGCAAAGTATGACAGGAAGGCTGAACTACAAGCTTTTGATGAGACGAAAACCGGTGTTAAGGGACTAGTCGATACAGGTATCACTAAAGTACCAAGAATGTTTGTTCAACCGTCAAGGATTGAAGATTCAACAATTCACAGCAACAAGAAGTTCAGTTTTCCAATAATTGATCTTGATGGTATCAAGGAAAATTCGATCAAACGAAAGAACATAGTCCAGGAAGTCGGTCAAGCATCCGAGACTTGGGGATTCTTTCAAGTGATCAATCATGGGATTCCTAGTCATCTTCTGGAGGAAATGAAAGACGGTGTTCTCAGTTTCTTTGAACAAGATACCGAGGAGAAGAAACAGTGGTATACGCGAGATTTGACAAAAGTGTTTACGTTTAACAGCAATTTCGACCTGTTTGGAGCACCAGTAACCAACTGGAGAGACACTTTTACTGCTACCACAGCTCCTATACCTCCAAAACCTGAAGAATTACCTTCTGTTTGCAGGTATCATAAATTCTAATCTACAATCCTACCCTTCTATAACATCATTTATCTAGAATAGATTTTTCAATAGCATTCATATTCAGACAAATGACGTTGTTATAGAGAGGTTTGACTGTATTGTAATTTTATTTGCTTGTTCTGTATCTATGATAAGGGATGTTCTCCTTGAGTACACAAACCAAGTGATGAAATTAGGTGATACTCTATTTGAAATACTGGCTGAAGCTATTGGCCTCGAACCAAATCACCTCAAGGACAT-GGGTTGTGCCGAGGGGCTTATGGCGTTAGGCCATTATTATCCAGCATGCCCACAACCAGAACTAAC</genome_strand>
        <mrna_strand>TTTTACTTCAAATATCAGCTAAGAAAAAAATGGAGTTGATCAACACAACTGAAGTCCAGGTTCCAAGAGAAGCAAAGTATGACAGGAAGGCTGAACTACAAGCTTTTGATGAGACGAAAACCGGTGTTAAGGGACTAGTCGATACAGGTATCACTAAAGTACCAAGAATGTTTGTTCAACCGTCAAGGATTGAAGATTCAACAATTCACAGCAACAAGAAGTTCAGTTTTCCAATAATTGATCTTGATGGTATCAAGGAAAATTCGATCAAACGAAAGAACATAGTCCAGGAAGTCGGTCAAGCATCCGAGACTTGGGGATTCTTTCAAGTGATCAATCATGGGATTCCTAGTCATCTTCTGGAGGAAATGAAAGACGGTGTTCTCAGTTTCTTTGAACAAGATACCGAGGAGAAGAAACAGTGGTATACGCGAGATTTGACAAAAGTGTTTACGTTTAACAGCAATTTCGACCTGTTTGGAGCACCAGTAACCAACTGGAGAGACACTTTTACTGCTACCACAGCTCCTATACCTCCAAAACCTGAAGAATTACCTTCTGTTTGCAG..........................................................................................................................................................GGATGTTCTCCTTGAGTACACAAACCAAGTGATGAAATTAGGTGATACTCTATTTGAAATACTGGCTGAAGCTATTGGCCTCGAACCAAAT-ACCTC-AGGACATGGGGTTGTGCCGAGGGGCTAATGGCGTTAGGCCATTATTATCCAGCATGCCCAC-ACCAGAACTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E705744" ref_strand="+" ref_description="SGN-E705744 [FA28AB01]">
      <seq>cgcttcaagatatggatagtcacgatcaaatcaatcgaaaaaaagtcattgagaaagtccgcgatgcatcagagacatggggtttctttcaagtgatcaatcatggcgttccgtgtgatgttatggaagaaatgatacgaggtgtttgtagttttcatgaacaagatactgatatcaagaagcaatggtatacgcgagagttgactaaaagagtagtttataacagtaactttgatttgtataatgcaccagcaactaattggagggatacttttttctgcattatggctcctaatcctcctagtcctgaagaattgcctccaatctgtagggatatcattgttaaatactctgaggaagtgaagaaactcgggcgttctttgtttgaactattagcagaagcacttggactcaatagaaactatctgaatgaaatggattgtggtgaaggactttcagttgtatgtcactattatccagcttgtccagaaccagaactaacattaggtgctagtaaacacgctgatgatggattcttgactttgcttcttcaagaccatatagggggattgcaagttcttcatcgaaatcattgggttgatgtccctcctacccctggtgctcttgttgtaaatattgcagatcttctgcagttaatatcaaatgacaagtttaaaagcgttgaacatcgtgtactggcaaatcgtgttggtccaaggatatcgatagcatgcttcttctccacattttttctagaagcgtcaagactttatggtcctattaaggagttgttatcagaagaaaatccgtccaaatacagagaaacaacaattcaggaatatgctgcctattttactgcaaaggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67250" stop="64814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66952" g_stop="66622" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66621" i_stop="66290" i_length="332">
            <donor d_prob="0.652" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66289" g_stop="65968" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="653" r_length="322" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65967" i_stop="65327" i_length="641">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65326" g_stop="65114" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="866" r_length="213" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E705744" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>866</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705744" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66952" e_stop="66622"/>
          <exon e_start="66289" e_stop="65968"/>
          <exon e_start="65326" e_stop="65114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACGCGAGAGTTGACTAAAAGAGTAGTTTATAACAGTAACTTTGATTTGTATAATGCACCAGCAACTAATTGGAGGGATACTTTTTTCTGCATTATGGCTCCTAATCCTCCTAGTCCTGAAGAATTGCCTCCAATCTGTAGGTATGTCATTTATACGACACGTGGTGTAAAAGGGGTTCGATTGAATCCTCTTCGTTGAAAAAGTATAGCGATATGTATGAAACTCGTTGAATCCCCTTGACAGAAGACCAGTAGCTAAGCTAGCAATTCTGCTAAGGGGTGTTCAAGATTTTGTATATGTATAATATAAAATGACTTTTGGATTGAGAGTGTTTAACTAACTGCCCTGACTCCCCTGCAGATATAAGTTTGAATCCTAGTTGTGACACACTATCATTTCTTGAATCCCCGTGTTAGAATTTCTGATTCCGATACTGATATTGTTTAGTGTTTTCTTTATGATGTGGTAAAAGGGATATCATTGTTAAATACTCTGAGGAAGTGAAGAAACTCGGGCGTTCTTTGTTTGAACTATTAGCAGAAGCACTTGGACTCAATAGAAACTATCTGAATGAAATGGATTGTGGTGAAGGACTTTCAGTTGTATGTCACTATTATCCAGCTTGTCCAGAACCAGAACTAACATTAGGTGCTAGTAAACACGCTGATGATGGATTCTTGACTTTGCTTCTTCAAGACCATATAGGGGGATTGCAAGTTCTTCATCGAAATCATTGGGTTGATGTCCCTCCTACCCCTGGTGCTCTTGTTGTAAATATTGCAGATCTTCTGCAGGTATGTCTTCTCACCTATCTGTACTGAAAATGAGTAGTGATCTTTAAAATTCATGCAAGTTGAATATTGTAAATGAGTAGCTCGTTGGCTACACTTTGAGCTCGCGAACCACTCTCATGCTTGTAGCTATAGTAGGTGAGACCCCAATATCATTGAGGGCCTTGTCATATTCATATGATGTACATATATGATTTTAAGGTATATCGGAGCCTTGCCCTGACACCTATACAGTTCATGTCATATGTTAGAGGCTCCATAGACTAGTATGTACCGGTCATGTGTACACTTGAGTTACATCACTATTTCATAACATGCACTGATCTCTAATTTCACACACACACACACACGAGCGTATGTTGTGTGATTATGTCAAAAGAATTATGTTCAAATGAACCAACATCAAGTCGTTAGGTCCATCACTGGACAACTTGTCCAGTGCATGAAACATTCCATGTTTATGCGAAGTTCAGGGAAGTGCCACACCTCAAGAGGGTGTAATGTAGGCAGCCTACCCTGACACAAACATCAGACGTCAAAACAACGCACAATGATTAATTTGAATTATCAGATATTACTACACTTGAAGGTTATTCATGCAGAGAAAACAAGTAGTAATGTTGTTTTGTCATGAAAATGTACAGTTAATATCAAATGACAAGTTTAAAAGCGTTGAACATCGTGTACTGGCAAATCGTGTTGGTCCAAGGATATCGATAGCATGCTTCTTCTCCACATTTTTTCTAGAAGCGTCAAGACTTTATGGTCCTATTAAGGAGTTGTTATCAGAAGAAAATCCGTCAAAATACAGAGAAACAACAATTCAGGAATATGCTGCCTATTTTACTGCAAAGGGA</genome_strand>
        <mrna_strand>CGCTTCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACGCGAGAGTTGACTAAAAGAGTAGTTTATAACAGTAACTTTGATTTGTATAATGCACCAGCAACTAATTGGAGGGATACTTTTTTCTGCATTATGGCTCCTAATCCTCCTAGTCCTGAAGAATTGCCTCCAATCTGTAG............................................................................................................................................................................................................................................................................................................................................GGATATCATTGTTAAATACTCTGAGGAAGTGAAGAAACTCGGGCGTTCTTTGTTTGAACTATTAGCAGAAGCACTTGGACTCAATAGAAACTATCTGAATGAAATGGATTGTGGTGAAGGACTTTCAGTTGTATGTCACTATTATCCAGCTTGTCCAGAACCAGAACTAACATTAGGTGCTAGTAAACACGCTGATGATGGATTCTTGACTTTGCTTCTTCAAGACCATATAGGGGGATTGCAAGTTCTTCATCGAAATCATTGGGTTGATGTCCCTCCTACCCCTGGTGCTCTTGTTGTAAATATTGCAGATCTTCTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATATCAAATGACAAGTTTAAAAGCGTTGAACATCGTGTACTGGCAAATCGTGTTGGTCCAAGGATATCGATAGCATGCTTCTTCTCCACATTTTTTCTAGAAGCGTCAAGACTTTATGGTCCTATTAAGGAGTTGTTATCAGAAGAAAATCCGTCCAAATACAGAGAAACAACAATTCAGGAATATGCTGCCTATTTTACTGCAAAGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E705086" ref_strand="+" ref_description="SGN-E705086 [FA26AE04]">
      <seq>aaaatctggtgtcaaaggacttgttgatgcaggagtaagtaaagtccctcagatattcatttcacctccagatacatactcaaattccaacacaggacagttcatttttccagttatagacctccaagatatggatagtcacgatcaaatcaatcgaaaaaaagtcattgagaaagtccgcgatgcatcagagacatggggtttctttcaagtgatcaatcatggcgttccgtgtgatgttatggaagaaatgatacgaggtgtttgtagttttcatgaacaagatactgatatcaagaagcaatggtatacgcgagagttgactaaaagagtagtttataacagtaactttgatttgtataatgcaccagcaactaattggagggatacttttttctgcattatggctcctaatcctcctagtcctgaagaattgcctccaatctgtagggatatcattgttaaatactctgaggaagtgaagaaactcgggcgttctttgtttgaactattagcagaagcacttggactcaatagaaactatctgaatgaaatggattgtggtgaaggactttcagttgtatgtcactattatccagcttgtccagaaccagaactaacattaggtgctagtaaacacgctgatgatggattcttgactttgcttcttcaagaccatatagggggattgcaagttcttcatcgaaatcattgggttgatgtccctcctacccctggtgctcttgttgtaaatattgcagatcttctgcagttaatatcaaatgacaagtttaaaagcgttgaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67371" stop="64992"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67071" g_stop="66622" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66621" i_stop="66290" i_length="332">
            <donor d_prob="0.652" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66289" g_stop="65968" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="772" r_length="322" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65967" i_stop="65327" i_length="641">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65326" g_stop="65292" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="773" r_stop="807" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E705086" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>807</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705086" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67071" e_stop="66622"/>
          <exon e_start="66289" e_stop="65968"/>
          <exon e_start="65326" e_stop="65292"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACGCGAGAGTTGACTAAAAGAGTAGTTTATAACAGTAACTTTGATTTGTATAATGCACCAGCAACTAATTGGAGGGATACTTTTTTCTGCATTATGGCTCCTAATCCTCCTAGTCCTGAAGAATTGCCTCCAATCTGTAGGTATGTCATTTATACGACACGTGGTGTAAAAGGGGTTCGATTGAATCCTCTTCGTTGAAAAAGTATAGCGATATGTATGAAACTCGTTGAATCCCCTTGACAGAAGACCAGTAGCTAAGCTAGCAATTCTGCTAAGGGGTGTTCAAGATTTTGTATATGTATAATATAAAATGACTTTTGGATTGAGAGTGTTTAACTAACTGCCCTGACTCCCCTGCAGATATAAGTTTGAATCCTAGTTGTGACACACTATCATTTCTTGAATCCCCGTGTTAGAATTTCTGATTCCGATACTGATATTGTTTAGTGTTTTCTTTATGATGTGGTAAAAGGGATATCATTGTTAAATACTCTGAGGAAGTGAAGAAACTCGGGCGTTCTTTGTTTGAACTATTAGCAGAAGCACTTGGACTCAATAGAAACTATCTGAATGAAATGGATTGTGGTGAAGGACTTTCAGTTGTATGTCACTATTATCCAGCTTGTCCAGAACCAGAACTAACATTAGGTGCTAGTAAACACGCTGATGATGGATTCTTGACTTTGCTTCTTCAAGACCATATAGGGGGATTGCAAGTTCTTCATCGAAATCATTGGGTTGATGTCCCTCCTACCCCTGGTGCTCTTGTTGTAAATATTGCAGATCTTCTGCAGGTATGTCTTCTCACCTATCTGTACTGAAAATGAGTAGTGATCTTTAAAATTCATGCAAGTTGAATATTGTAAATGAGTAGCTCGTTGGCTACACTTTGAGCTCGCGAACCACTCTCATGCTTGTAGCTATAGTAGGTGAGACCCCAATATCATTGAGGGCCTTGTCATATTCATATGATGTACATATATGATTTTAAGGTATATCGGAGCCTTGCCCTGACACCTATACAGTTCATGTCATATGTTAGAGGCTCCATAGACTAGTATGTACCGGTCATGTGTACACTTGAGTTACATCACTATTTCATAACATGCACTGATCTCTAATTTCACACACACACACACACGAGCGTATGTTGTGTGATTATGTCAAAAGAATTATGTTCAAATGAACCAACATCAAGTCGTTAGGTCCATCACTGGACAACTTGTCCAGTGCATGAAACATTCCATGTTTATGCGAAGTTCAGGGAAGTGCCACACCTCAAGAGGGTGTAATGTAGGCAGCCTACCCTGACACAAACATCAGACGTCAAAACAACGCACAATGATTAATTTGAATTATCAGATATTACTACACTTGAAGGTTATTCATGCAGAGAAAACAAGTAGTAATGTTGTTTTGTCATGAAAATGTACAGTTAATATCAAATGACAAGTTTAAAAGCGTTGAACA</genome_strand>
        <mrna_strand>AAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACGCGAGAGTTGACTAAAAGAGTAGTTTATAACAGTAACTTTGATTTGTATAATGCACCAGCAACTAATTGGAGGGATACTTTTTTCTGCATTATGGCTCCTAATCCTCCTAGTCCTGAAGAATTGCCTCCAATCTGTAG............................................................................................................................................................................................................................................................................................................................................GGATATCATTGTTAAATACTCTGAGGAAGTGAAGAAACTCGGGCGTTCTTTGTTTGAACTATTAGCAGAAGCACTTGGACTCAATAGAAACTATCTGAATGAAATGGATTGTGGTGAAGGACTTTCAGTTGTATGTCACTATTATCCAGCTTGTCCAGAACCAGAACTAACATTAGGTGCTAGTAAACACGCTGATGATGGATTCTTGACTTTGCTTCTTCAAGACCATATAGGGGGATTGCAAGTTCTTCATCGAAATCATTGGGTTGATGTCCCTCCTACCCCTGGTGCTCTTGTTGTAAATATTGCAGATCTTCTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATATCAAATGACAAGTTTAAAAGCGTTGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E708905" ref_strand="+" ref_description="SGN-E708905 [FA42AD08]">
      <seq>cattaatcaaaacatgatagaaaaagtgagttaaaagcctttgatgacacaaaatctggtgtcaaaggacttgttgatgcaggagtaagtaaagtccctcagatattcatttcacctccagatacatactcaaattccaacacaggacagttcatttttccagttatagacctccaagatatggatagtcacgatcaaatcaatcgaaaaaaagtcattgagaaagtccgcgatgcatcagagacatggggtttctttcaagtgatcaatcatggcgttccgtgtgatgttatggaagaaatgatacgaggtgtttgtagttttcatgaacaagatactgatatcaagaagcaatggtatacgcgagagttgactaaaagagtagtttataacagtaactttgatttgtataatgcaccagcaactaattggagggatacttttttctgcattatggctcctaatcctcctagtcctgaagaattgcctccaatctgtagggatatcattgttaaatactctgaggaagtgaagaaactcgggcgttctttgtttgaactattagcagaagcacttggactcaatagaaactatctgaatgaaatggattgtggtgaaggactttcagttgtatgtcactattatccagcttgtccagaaccagaactaacattaggtgctagtaaacacgctgatgatggattcttgactttgcttcttcaagaccatatagggggattgcaagttcttcatcgaaatcattgggttgatgtccctcctacccctggtgctcttgttgtaaatattgcagatcttctgcaggtatgtcttctcacctatctgtactgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67420" stop="65638"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67121" g_stop="66622" g_length="500"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="500" r_length="500" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66621" i_stop="66290" i_length="332">
            <donor d_prob="0.652" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66289" g_stop="65938" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="852" r_length="352" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E708905" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>852</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708905" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67121" e_stop="66622"/>
          <exon e_start="66289" e_stop="65938"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACGCGAGAGTTGACTAAAAGAGTAGTTTATAACAGTAACTTTGATTTGTATAATGCACCAGCAACTAATTGGAGGGATACTTTTTTCTGCATTATGGCTCCTAATCCTCCTAGTCCTGAAGAATTGCCTCCAATCTGTAGGTATGTCATTTATACGACACGTGGTGTAAAAGGGGTTCGATTGAATCCTCTTCGTTGAAAAAGTATAGCGATATGTATGAAACTCGTTGAATCCCCTTGACAGAAGACCAGTAGCTAAGCTAGCAATTCTGCTAAGGGGTGTTCAAGATTTTGTATATGTATAATATAAAATGACTTTTGGATTGAGAGTGTTTAACTAACTGCCCTGACTCCCCTGCAGATATAAGTTTGAATCCTAGTTGTGACACACTATCATTTCTTGAATCCCCGTGTTAGAATTTCTGATTCCGATACTGATATTGTTTAGTGTTTTCTTTATGATGTGGTAAAAGGGATATCATTGTTAAATACTCTGAGGAAGTGAAGAAACTCGGGCGTTCTTTGTTTGAACTATTAGCAGAAGCACTTGGACTCAATAGAAACTATCTGAATGAAATGGATTGTGGTGAAGGACTTTCAGTTGTATGTCACTATTATCCAGCTTGTCCAGAACCAGAACTAACATTAGGTGCTAGTAAACACGCTGATGATGGATTCTTGACTTTGCTTCTTCAAGACCATATAGGGGGATTGCAAGTTCTTCATCGAAATCATTGGGTTGATGTCCCTCCTACCCCTGGTGCTCTTGTTGTAAATATTGCAGATCTTCTGCAGGTATGTCTTCTCACCTATCTGTACTGAAAA</genome_strand>
        <mrna_strand>CATTAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACGCGAGAGTTGACTAAAAGAGTAGTTTATAACAGTAACTTTGATTTGTATAATGCACCAGCAACTAATTGGAGGGATACTTTTTTCTGCATTATGGCTCCTAATCCTCCTAGTCCTGAAGAATTGCCTCCAATCTGTAG............................................................................................................................................................................................................................................................................................................................................GGATATCATTGTTAAATACTCTGAGGAAGTGAAGAAACTCGGGCGTTCTTTGTTTGAACTATTAGCAGAAGCACTTGGACTCAATAGAAACTATCTGAATGAAATGGATTGTGGTGAAGGACTTTCAGTTGTATGTCACTATTATCCAGCTTGTCCAGAACCAGAACTAACATTAGGTGCTAGTAAACACGCTGATGATGGATTCTTGACTTTGCTTCTTCAAGACCATATAGGGGGATTGCAAGTTCTTCATCGAAATCATTGGGTTGATGTCCCTCCTACCCCTGGTGCTCTTGTTGTAAATATTGCAGATCTTCTGCAGGTATGTCTTCTCACCTATCTGTACTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E308685" ref_strand="+" ref_description="SGN-E308685 [cLEZ-13-K9]">
      <seq>atgaatcaaaacatgatagaaaaagtgagttaaaagcctttgatgacacaaaatctggtgtcaaaggacttgttgatgcaggagtaagtaaagtccctcagatattcatttcacctccagatacatactcaaattccaacacaggacagttcatttttccagttatagacctccaagatatggatagtcacgatcaaatcaatcgaaaaaaagtcattgagaaagtccgcgatgcatcagagacatggggtttctttcaagtgatcaatcatggcgttccgtgtgatgttatggaagaaatgatacgaggtgtttgtagttttcatgaacaagatactgatatcaagaagcaatggtatacgcgagagttgactaaaagagtagtttataacagtaactttgatttgtataatgcaccagcaactaattggagggatacttttttctgcattatggctcctaatcctcctagtcctgaagaattgcctccaatctgtagggatatcattgttaaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67420" stop="65971"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67120" g_stop="66622" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66621" i_stop="66290" i_length="332">
            <donor d_prob="0.652" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66289" g_stop="66271" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="518" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E308685" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308685" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67120" e_stop="66622"/>
          <exon e_start="66289" e_stop="66271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACGCGAGAGTTGACTAAAAGAGTAGTTTATAACAGTAACTTTGATTTGTATAATGCACCAGCAACTAATTGGAGGGATACTTTTTTCTGCATTATGGCTCCTAATCCTCCTAGTCCTGAAGAATTGCCTCCAATCTGTAGGTATGTCATTTATACGACACGTGGTGTAAAAGGGGTTCGATTGAATCCTCTTCGTTGAAAAAGTATAGCGATATGTATGAAACTCGTTGAATCCCCTTGACAGAAGACCAGTAGCTAAGCTAGCAATTCTGCTAAGGGGTGTTCAAGATTTTGTATATGTATAATATAAAATGACTTTTGGATTGAGAGTGTTTAACTAACTGCCCTGACTCCCCTGCAGATATAAGTTTGAATCCTAGTTGTGACACACTATCATTTCTTGAATCCCCGTGTTAGAATTTCTGATTCCGATACTGATATTGTTTAGTGTTTTCTTTATGATGTGGTAAAAGGGATATCATTGTTAAATAC</genome_strand>
        <mrna_strand>ATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACGCGAGAGTTGACTAAAAGAGTAGTTTATAACAGTAACTTTGATTTGTATAATGCACCAGCAACTAATTGGAGGGATACTTTTTTCTGCATTATGGCTCCTAATCCTCCTAGTCCTGAAGAATTGCCTCCAATCTGTAG............................................................................................................................................................................................................................................................................................................................................GGATATCATTGTTAAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E293583" ref_strand="+" ref_description="SGN-E293583 [cLET-15-N11]">
      <seq>ctgttctgatgggaggtaacatttagtggacgcaagctaaccgagacatcacttttgttaaagggaagagtactatatcctattgatgaataatagaacaagatatatcaagaaaatggatacaaatgaatcaaaacatgatagaaaaagtgagttaaaagcctttgatgacacaaaatctggtgtcaaaggacttgttgatgcaggagtaagtaaagtccctcagatattcatttcacctccagatacatactcaaattccaacacaggacagttcatttttccagttatagacctccaagatatggatagtcacgatcaaatcaatcgaaaaaaagtcattgagaaagtccgcgatgcatcagagacatggggtttctttcaagtgatcaatcatggcgttccgtgtgatgttatggaagaaatgatacgaagtgtttgtagttttcatgaacaagatactgatatcaagaagcaatggtatacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67545" stop="66459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67245" g_stop="66759" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E293583" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293583" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67245" e_stop="66759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTCTGATGGGAGGTAACATTTAGTGGACGCAAGCTAACCGAGACATCACTTTTGTTAAAGGGAAGAGTACTATATCCTATTGATGAATAATAGAACAAGATATATCAAGAAAATGGATACAAATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACG</genome_strand>
        <mrna_strand>CTGTTCTGATGGGAGGTAACATTTAGTGGACGCAAGCTAACCGAGACATCACTTTTGTTAAAGGGAAGAGTACTATATCCTATTGATGAATAATAGAACAAGATATATCAAGAAAATGGATACAAATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAAGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E293584" ref_strand="+" ref_description="SGN-E293584 [cLET-15-N11]">
      <seq>ctgttctgatgggaggtaacatttagtggacgcaagctaaccgagacatcacttttgttaaagggaagagtactatatcctattgatgaataatagaacaagatatatcaagaaaatggatacaaatgaatcaaaacatgatagaaaaagtgagttaaaagcctttgatgacacaaaatctggtgtcaaaggacttgttgatgcaggagtaagtaaagtccctcagatattcatttcacctccagatacatactcaaattccaacacaggacagttcatttttccagttatagacctccaagatatggatagtcacgatcaaatcaatcgaaaaaaagtcattgagaaagtccgcgatgcatcagagacatggggtttctttcaagtgatcaatcatggcgttccgtgtgatgttatggaagaaatgatacgaagtgtttgtagttttcatgaacaagatactgatatcaagaagcaatggtatacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67545" stop="66459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67245" g_stop="66759" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E293584" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67245" e_stop="66759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTCTGATGGGAGGTAACATTTAGTGGACGCAAGCTAACCGAGACATCACTTTTGTTAAAGGGAAGAGTACTATATCCTATTGATGAATAATAGAACAAGATATATCAAGAAAATGGATACAAATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACG</genome_strand>
        <mrna_strand>CTGTTCTGATGGGAGGTAACATTTAGTGGACGCAAGCTAACCGAGACATCACTTTTGTTAAAGGGAAGAGTACTATATCCTATTGATGAATAATAGAACAAGATATATCAAGAAAATGGATACAAATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAAGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E300999" ref_strand="+" ref_description="SGN-E300999 [cLEW-22-C5]">
      <seq>tcggttggtgtctgttctgatgggaggtaacatttagtggacgcaagctaaccgagacatcacttttgttaaagggaagagtactatatcctattgatgaataatagaacaagatatatcaagaaaatggatacaaatgaatcaaaacatgatagaaaaagtgagttaaaagcctttgatgacacaaaatctggtgtcaaaggacttgttgatgcaggagtaagtaaagtccctcagatattcatttcacctccagatacatactcaaattccaacacaggacagttcatttttccagttatagacctccaagatatggatagtcacgatcaaatcaatcgaaaaaaagtcattgagaaagtccgcgatgcatcagagacatggggtttctttcaagtgatcaatcatggcgttccgtgtgatgttatggaagaaatgatacgaggtgtttgtagttttcatgaacaagatactgatatcaagaagcaatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67556" stop="66465"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67256" g_stop="66765" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="492" r_length="492" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E300999" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67256" e_stop="66765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGTTGGTGTCTGTTCTGATGGGAGGTAACATTTAGTGGACGCAAGCTAACCGAGACATCACTTTTGTTAAAGGGAAGAGTACTATATCCTATTGATGAATAATAGAACAAGATATATCAAGAAAATGGATACAAATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGG</genome_strand>
        <mrna_strand>TCGGTTGGTGTCTGTTCTGATGGGAGGTAACATTTAGTGGACGCAAGCTAACCGAGACATCACTTTTGTTAAAGGGAAGAGTACTATATCCTATTGATGAATAATAGAACAAGATATATCAAGAAAATGGATACAAATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E368375" ref_strand="+" ref_description="SGN-E368375 [TUS-23-J13]">
      <seq>tcgtgccgccagttcacactgcactcgccggaatctctcacggcggcgatctctttctccggaggatttaaagtcctaagtctcttcatttatatcttcaattcacgaattccctttggttagtgttcatgagccataaacgctactttttattttttgatttggtgaaatgtgacttttgaattggatctatgtacatcttgaaaatcctcagattcaatttttcttagctctgtgtgaatatttacgtcgctgtgcttcggctacctgtagaaatgataatttagagtcaaaggaaaatatcataagtttggcctcttcgactgttagagcgatttgtctgctgtgcttttggttcttcttttaatctttgcttctagctggaaattttttctttttttctgcttcttcgatatgttttggaaactgaatttggggttgtttttttgggtctaaagccactgttgagctgcccttgtgtgttagcagttagtacattatctggaattgattgttttcgtcttttgcagtctgctgcaatagcatcaaaggatacttctgtgctttctttgatagatgaacaactagttttcctcgtaaaaatgatgtaaaggtttaatttgaattcagtttcattcgttcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67807" stop="69050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68107" g_stop="68750" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="645" r_length="645" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E368375" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68107" e_stop="68750"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCGGCCAGTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTC-TTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATT</genome_strand>
        <mrna_strand>TCGTGCCGCCAGTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTTCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E246120" ref_strand="+" ref_description="SGN-E246120 [cLEF-40-E22]">
      <seq>tcgtgccgccagttcacactgcactcgccggaatctctcacggcggcgatctctttctccggaggatttaaagtcctaagtctcttcatttatatcttcaattcacgaattccctttggttagtgttcatgagccataaacgctactttttattttttgatttggtgaaatgtgacttttgaattggatctatgtacatcttgaaaatcctcagattcaatttttcttagctctgtgtgaatatttacgtcgctgtgcttcggctacctgtagaaatgataatttagagtcaaaggaaaatatcataagtttggcctcttcgactgttagagcggtttgtctgctgtgcttttggttcttcttttaatctttgcttctagctggaaattttttctttttttctgcttcttcgatatgttttggaaactgaatttggggttgtttttttgggtctaaagccactgttgagctgcccttgtgtgttagcagttagtacattatctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67807" stop="68912"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68107" g_stop="68612" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E246120" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246120" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68107" e_stop="68612"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCGGCCAGTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGA</genome_strand>
        <mrna_strand>TCGTGCCGCCAGTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGGTTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E437657" ref_strand="+" ref_description="SGN-E437657 [cSTA-4-H1]">
      <seq>gccagtcgataccgctctcgccggaatctctcacggcggcgatctctttctccggaggatttaaattcgagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcgtcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcattgcacggttaagacccatccaaacctgtacagctctacgtgaaattatagggcctttgcagtctcgttcatttcaagctgattttgttcccagagatcctaatgccaagcccataaggtacaaatatcctgctgcatatgatccatatggccctagatccccaccatcagacaagatagttcagcttgctgaacgtatcgctgctttagccccagaagaacgtatacaaattggtcctttactcagggagatactaaggcaccctactttgaaacaaatttcagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67814" stop="69831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68114" g_stop="68178" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69092" i_length="914">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.938" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69093" g_stop="69531" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="503" r_length="438" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E437657" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E437657" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68114" e_stop="68178"/>
          <exon e_start="69093" e_stop="69531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAGTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTA</genome_strand>
        <mrna_strand>GCCAGTCGATACCGCTCTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-TTCGAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCGTCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATTGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTACGTGAAATTATAGGGCCTTTGCAGTCTCGTTCATTTCAAGCTGATTTTGTTCCCAGAGATCCTAATGCCAAGCCCATAAGGTACAAATATCCTGCTGCATATGATCCATATGGCCCTAGATCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATCGCTGCTTTAGCCCCAGAAGAACGTATACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACAAATTTCAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E437647" ref_strand="+" ref_description="SGN-E437647 [cSTA-4-F1]">
      <seq>gccagtcgataccgcactcgccggaatctctcacggcggcgatctctttctccggaggatttaaattcgagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcgtcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcattgcacggttaagacccatccaaacctgtacagctctacgtgaaattatagggcctttgcagtctcgttcatttcaagctgattttgttcccagagatcctaatgccaagcccataaggtacaaatatcctgctgcatatgatccatatggccctagatccccaccatcagacaagatagttcagcttgctgaacgtatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67814" stop="69743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68114" g_stop="68178" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69092" i_length="914">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.938" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69093" g_stop="69444" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="416" r_length="351" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E437647" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E437647" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68114" e_stop="68178"/>
          <exon e_start="69093" e_stop="69444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAGTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATT</genome_strand>
        <mrna_strand>GCCAGTCGATACCGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-TTCGAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCGTCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATTGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTACGTGAAATTATAGGGCCTTTGCAGTCTCGTTCATTTCAAGCTGATTTTGTTCCCAGAGATCCTAATGCCAAGCCCATAAGGTACAAATATCCTGCTGCATATGATCCATATGGCCCTAGATCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E481497" ref_strand="+" ref_description="SGN-E481497 [cSTD-18-M4]">
      <seq>agtcgataccgcactcgccggaatctctcacggcggcgatctctttctccggaggatttaaattcgcaggagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacatgtacagctcttcgtgaaattatagggcctctgcagtctcgttcatttcaacctgattttgttcccagagatcctaatgccaatcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacctccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcanggagatactaagacatcctactttgaaacaaatttcagtagaaagcatggatttgggtgcaatgggaggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67817" stop="69862"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68117" g_stop="68178" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69088" i_length="910">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69089" g_stop="69562" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="535" r_length="473" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E481497" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E481497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68117" e_stop="68178"/>
          <exon e_start="69089" e_stop="69562"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAG</genome_strand>
        <mrna_strand>AGTCGATACCGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCAG-GAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACATGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCATTTCAACCTGATTTTGTTCCCAGAGATCCTAATGCCAATCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCTCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCANGGAGATACTAAGACATCCTACTTTGAAACAAATTTCAGTAGAAAGCATGGATTTGGGTGCAATGGGAGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E418520" ref_strand="+" ref_description="SGN-E418520 [STM-27-B10]">
      <seq>gtcgacaccgcactcgccggaatctctcacggcggcgttctctatctccggaggatttaaattcgagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcatcatttgcaattcattgcttggaaagtgatatgttaagcatgaagctcattgcacggttaagacccatccaaacctgtacagctctacgtgaaattatagggcctttgcagtctcgttcatttcaacctgattttgttcccagagatcctaatgccaagcccataaggtacaaatatcctgctgcatatgatccatatggcccaagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctaatttgaaacaaatttcagtagaaggcatggatttgggtgcaataggaggagcaggtggtggaccggcaaaggctgangagaagaaggtagagaaaacagcatttgacgtcaagttggagaaatttgatgcagctgcaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67820" stop="69953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68118" g_stop="68178" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69092" i_length="914">
            <donor d_prob="0.773" d_score="0.96"/>
            <acceptor a_prob="0.938" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69093" g_stop="69653" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="621" r_length="560" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E418520" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E418520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68118" e_stop="68178"/>
          <exon e_start="69093" e_stop="69653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAAT</genome_strand>
        <mrna_strand>GTCGACACCGCACTCGCCGGAATCTCTCACGGCGGCGTTCTCTATCTCCGGAGGATTTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-TTCGAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCATCATTTGCAATTCATTGCTTGGAAAGTGATATGTTAAGCATGAAGCTCATTGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTACGTGAAATTATAGGGCCTTTGCAGTCTCGTTCATTTCAACCTGATTTTGTTCCCAGAGATCCTAATGCCAAGCCCATAAGGTACAAATATCCTGCTGCATATGATCCATATGGCCCAAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTAATTTGAAACAAATTTCAGTAGAAGGCATGGATTTGGGTGCAATAGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGANGAGAAGAAGGTAGAGAAAACAGCATTTGACGTCAAGTTGGAGAAATTTGATGCAGCTGCAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E459683" ref_strand="+" ref_description="SGN-E459683 [cPRO-28-J15]">
      <seq>gtcgataccgcactcgccggaatctctcacggcggcgatctctttctccggaggatttaaattcgagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacatgtacagctcttcgtgaaattatagggcctctgcagtctcgttcatttcaacctgattttgttcccagagatcctaatgccaatcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacctccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaagacatcctactttgaaacaaatttcagtagaaggcatggatttgggtgcaatgggaggagcangtggtggaccggcaaaggctgaggagaagaaggtagagaaacagcatttgacgtcaagttggagaaatttgatgcagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67820" stop="69946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68118" g_stop="68178" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69092" i_length="914">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.938" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69093" g_stop="69646" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="613" r_length="552" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E459683" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68118" e_stop="68178"/>
          <exon e_start="69093" e_stop="69646"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTG</genome_strand>
        <mrna_strand>GTCGATACCGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-TTCGAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACATGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCATTTCAACCTGATTTTGTTCCCAGAGATCCTAATGCCAATCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCTCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGACATCCTACTTTGAAACAAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCANGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTAGAG-AAACAGCATTTGACGTCAAGTTGGAGAAATTTGATGCAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E444465" ref_strand="+" ref_description="SGN-E444465 [cSTA-43-C7]">
      <seq>gtcgacaccgcactcgccggaatctctcacggcggcgttctctatctccggaggatttaaattcgagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcatcatttgcaattcattgcttggaaagtgatatgttaagcatgaagctcattgcacggttaagacccatccaaacctgtacagctctacgtgaaattatagggcctttgcagtctcgttcatttcaacctgattttgttcccagagatcctaatgccaagcccataaggtacaaatatcctgctgcatatgatccatatggcccaagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccaaaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctaatttgaaacaaatttcattaaaaggcatggatttgggtgcaatacgaggagcaggtggtggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67820" stop="69874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68118" g_stop="68178" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69092" i_length="914">
            <donor d_prob="0.773" d_score="0.96"/>
            <acceptor a_prob="0.938" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69093" g_stop="69574" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="542" r_length="481" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E444465" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E444465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68118" e_stop="68178"/>
          <exon e_start="69093" e_stop="69574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGAC</genome_strand>
        <mrna_strand>GTCGACACCGCACTCGCCGGAATCTCTCACGGCGGCGTTCTCTATCTCCGGAGGATTTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-TTCGAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCATCATTTGCAATTCATTGCTTGGAAAGTGATATGTTAAGCATGAAGCTCATTGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTACGTGAAATTATAGGGCCTTTGCAGTCTCGTTCATTTCAACCTGATTTTGTTCCCAGAGATCCTAATGCCAAGCCCATAAGGTACAAATATCCTGCTGCATATGATCCATATGGCCCAAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAAAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTAATTTGAAACAAATTTCATTAAAAGGCATGGATTTGGGTGCAATACGAGGAGCAGGTGGTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E444464" ref_strand="+" ref_description="SGN-E444464 [cSTA-43-C5]">
      <seq>gtcgacaccgcactcgccggaatctctcacggcggcgttctctatctccggaggatttaaattcgagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcatcatttgcaattcattgcttggaaagtgatatgttaagcatgaagctcattgcacggttaagacccatccaaacctgtacagctctacgtgaaattatagggcctttgcagtctcgttcatttcaacctgattttgttcccagagatcctaatgccaagcccataaggtacaaatatcctgctgcatatgatccatatggcccaagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctaatttgaaacaaatttcagtagaaggcatggatttgggtgcaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67820" stop="69854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68118" g_stop="68178" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69092" i_length="914">
            <donor d_prob="0.773" d_score="0.96"/>
            <acceptor a_prob="0.938" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69093" g_stop="69554" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="522" r_length="461" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E444464" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E444464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68118" e_stop="68178"/>
          <exon e_start="69093" e_stop="69554"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAAT</genome_strand>
        <mrna_strand>GTCGACACCGCACTCGCCGGAATCTCTCACGGCGGCGTTCTCTATCTCCGGAGGATTTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-TTCGAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCATCATTTGCAATTCATTGCTTGGAAAGTGATATGTTAAGCATGAAGCTCATTGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTACGTGAAATTATAGGGCCTTTGCAGTCTCGTTCATTTCAACCTGATTTTGTTCCCAGAGATCCTAATGCCAAGCCCATAAGGTACAAATATCCTGCTGCATATGATCCATATGGCCCAAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTAATTTGAAACAAATTTCAGTAGAAGGCATGGATTTGGGTGCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E442188" ref_strand="+" ref_description="SGN-E442188 [cSTA-32-C14]">
      <seq>gtcgacaccgcactcgccggggtctctcacggcggcgttctctatctccggaggatttaaattcgagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcatcatttgcaattcattgcttggaaagtgatatgttaagcatgaagctcattgcacggttaagacccatccaaacctgtacagctctacgtgaaattatagggcctttgcagtctcgttcatttcaacctgattttgttcccagagatcctaatgccaagcccataaggtacaaatatcctgctgcatatgatccatatggcccaagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaagcaccctaatttgaaacaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67820" stop="69825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68118" g_stop="68178" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.885"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69092" i_length="914">
            <donor d_prob="0.773" d_score="0.92"/>
            <acceptor a_prob="0.938" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69093" g_stop="69525" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="493" r_length="432" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E442188" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E442188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68118" e_stop="68178"/>
          <exon e_start="69093" e_stop="69525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATT</genome_strand>
        <mrna_strand>GTCGACACCGCACTCGCCGGGGTCTCTCACGGCGGCGTTCTCTATCTCCGGAGGATTTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-TTCGAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCATCATTTGCAATTCATTGCTTGGAAAGTGATATGTTAAGCATGAAGCTCATTGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTACGTGAAATTATAGGGCCTTTGCAGTCTCGTTCATTTCAACCTGATTTTGTTCCCAGAGATCCTAATGCCAAGCCCATAAGGTACAAATATCCTGCTGCATATGATCCATATGGCCCAAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAAGCACCCTAATTTGAAACAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E447356" ref_strand="+" ref_description="SGN-E447356 [cSTA-26-M13]">
      <seq>cgacaccgcactcgccggaatctctcacggcggcgttctctatctccggaggatttaaattcgcaggagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcatcatttgcaattcattgcttggaaagtgatatgttaagcatgaagctcattgcacggttaagacccatccaaacctgtacagctctacgtgaaattatagggcctttgcagtctcgttcatttcaacctgattttgttcccagagatcctaatgccaagcccataaggtacaaatatcctgctgcatatgatccatatggcccaagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctaatttgaaacaaatttcagtagaaggcatggatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67819" stop="69847"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68120" g_stop="68178" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.915"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69088" i_length="910">
            <donor d_prob="0.773" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69089" g_stop="69547" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="517" r_length="458" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E447356" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E447356" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68120" e_stop="68178"/>
          <exon e_start="69089" e_stop="69547"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGG</genome_strand>
        <mrna_strand>CGACACCGCACTCGCCGGAATCTCTCACGGCGGCGTTCTCTATCTCCGGAGGATTTAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCAG-GAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCATCATTTGCAATTCATTGCTTGGAAAGTGATATGTTAAGCATGAAGCTCATTGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTACGTGAAATTATAGGGCCTTTGCAGTCTCGTTCATTTCAACCTGATTTTGTTCCCAGAGATCCTAATGCCAAGCCCATAAGGTACAAATATCCTGCTGCATATGATCCATATGGCCCAAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTAATTTGAAACAAATTTCAGTAGAAGGCATGGATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E697226" ref_strand="+" ref_description="SGN-E697226 [FA01AG05]">
      <seq>actgcactcgccggaatctctcacggcggcgatctctttctccggaggatttaaagtcctaagtctcttcatttatatcttcaattcacgaattcccttggccaggagtgagtgtaaagcacaagttttaccaagtggttgaagtggaaattatccgagttcttttgcattagcacaacacgcgtatgaaattctgatcaagctaacatcatttgcaattcattgcttggaaagtgataccttagccttgaggctattaccccggttagaacccttccaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67824" stop="69569"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68124" g_stop="68224" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68225" i_stop="69088" i_length="864">
            <donor d_prob="0.604" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69089" g_stop="69269" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="282" r_length="181" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E697226" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>282</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E697226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68124" e_stop="68224"/>
          <exon e_start="69089" e_stop="69269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAAC</genome_strand>
        <mrna_strand>ACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATACCTTAGCCTTGAGGCTATTACCCCGGTTAGAACCCTTCCAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E557558" ref_strand="+" ref_description="SGN-E557558 [16376]">
      <seq>ccgcactcgccggaatctctcacggcggcgatctctttctccggaggatttaaattcgagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcgtcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcattgcacggttaagacccatccaaacctgtacagctctacgtgaaattatagggcctttgcagtctcgttcatttcaagctgattttgttcccagagatcctaatgccaagcccataaggtacaaatatcctgctgcatatgatccatatggccctagatccccaccatcagacaagatagttcagcttgctgaacgtatcgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctactttgaaacaaatttcagtagaaggcatggatttgggtgcaatgggaggagcangtggtggaccggcaaaggccgaggagaagaaggtagagaaaacagcatttgacgttcagttggagaaatttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67825" stop="69939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68125" g_stop="68178" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69092" i_length="914">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.938" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69093" g_stop="69639" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="600" r_length="546" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E557558" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E557558" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68125" e_stop="68178"/>
          <exon e_start="69093" e_stop="69639"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGAT</genome_strand>
        <mrna_strand>CCGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-TTCGAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCGTCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATTGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTACGTGAAATTATAGGGCCTTTGCAGTCTCGTTCATTTCAAGCTGATTTTGTTCCCAGAGATCCTAATGCCAAGCCCATAAGGTACAAATATCCTGCTGCATATGATCCATATGGCCCTAGATCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATCGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACAAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCANGTGGTGGACCGGCAAAGGCCGAGGAGAAGAAGGTAGAGAAAACAGCATTTGACGTTCAGTTGGAGAAATTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E450102" ref_strand="+" ref_description="SGN-E450102 [cSTS-8-K10]">
      <seq>cgcactcgccggaatctctcacggcggcgatctctttctccggaggatttaaattcggtgattggactgtatttttcgtttctattatatcagctgaatgtcgaattttcttttcaaggcaggagtgtaaagcacaagctttaccaagtggttgaagtggaaattatctgagttcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacatgtacagctcttcgtgaaattatagggcctctgcagtctcgttcatttcaacctgattttgttcccagagatcctaatgccaatcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacctccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaagacatcctactttgaaacaaatttcagtagaaggcatggatttgggtgcaatgggaggagcangtggtggaccggcaaaggctgaggagaagaaggtagagaaaacagcatttgacgtcaagttggagaaatttgatgcagctgcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67827" stop="69952"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68126" g_stop="68178" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68179" i_stop="69022" i_length="844">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.107" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69023" g_stop="69651" g_length="629"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="677" r_length="625" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E450102" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E450102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68126" e_stop="68178"/>
          <exon e_start="69023" e_stop="69651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAA</genome_strand>
        <mrna_strand>CGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTT-AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGTGATTGGACTGTATTTTTCGTTTCTATTATATCAGCTGAATGTCGAATTTTCTTTTCAAGGC---AG-GAGTGTAAAGCACAAGCTTTACCAAGTGGTTGAAGTGGAAATTATCTGAGTTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACATGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCATTTCAACCTGATTTTGTTCCCAGAGATCCTAATGCCAATCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCTCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGACATCCTACTTTGAAACAAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCANGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTAGAGAAAACAGCATTTGACGTCAAGTTGGAGAAATTTGATGCAGCTGCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E321546" ref_strand="+" ref_description="SGN-E321546 [cTOB-25-C23]">
      <seq>tctcacggcggcgatctctttctccggaggatttaaagtcctaagtctcttcatttatatcttcaattcacgaattccctttggcaggagtgagtgtaaagcacaagttttaccaagtggttgaagtggaaattatccgagttcttttgcattagcacaacacgcgtatgaaattctgatcaagctaacatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacctgtacagctcttcgtgaaattatagggcctctgcagtctcgttcgtttcaacctgattttgttcccagagatcctaatgtcaagcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctactttgaaaccaatttcagtagaaggcatggatttgggtgcaatgggaggagcaggtggtggaccggcaaaggctgaggagaagaagttgagaaaacagcatttgacgtgaagttagagaaatttgatgcagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="67842" stop="69946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68142" g_stop="68224" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68225" i_stop="69088" i_length="864">
            <donor d_prob="0.604" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69089" g_stop="69646" g_length="558"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="640" r_length="557" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E321546" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321546" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68142" e_stop="68224"/>
          <exon e_start="69089" e_stop="69646"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATTGTCGTAGTTGTTATCTGTATATCTTTTGTAAATTCTTTTCGTTGTAAATTAAAATGTCACATTTGCCTTCTTTGTTATTATTGACGATGACCACTGGCCTGTTATCCATCTTTGGTGCGTTGTGTTGCGTTTATAATACACTGATGATTTTGTCAATCTAAAGTCATATATGAAAGCTTCATTTTAGGAACTTTTACGAGTGTCCGTTCGTAAACTAAAACGAATGGAAGTTTTAGTTTTTGAGGAATTTATGTGTATGTGTCTATTGATAGATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTG</genome_strand>
        <mrna_strand>TCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAA-GTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E561336" ref_strand="+" ref_description="SGN-E561336 [17311]">
      <seq>ctttaccaagtggttgaagtggaaattatctgaattcttctgcattagcacaacacgcgtatgaaattctgatcaagctagcatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacctgtacagctctacgtgaaattatagggcctttgcagtctcgttcatttcaacctgattttgttcccagagatcctaatgccaagcccataaggtacaaatatcctgctgcatatgatccatatggccctagacccccaccatcagacaagatagtacagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctaatttgaaacaaatttcagtaaaaggcatggatttgggtgcaatgggaggagcaggtggtggaccggcaaaggctgaggagaagaaggttgagaaaacagcatttgacgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="68814" stop="69920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69113" g_stop="69621" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="509" r_length="509" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E561336" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E561336" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69113" e_stop="69621"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTG</genome_strand>
        <mrna_strand>CTTTACCAAGTGGTTGAAGTGGAAATTATCTGAATTCTTCTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAGCATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTACGTGAAATTATAGGGCCTTTGCAGTCTCGTTCATTTCAACCTGATTTTGTTCCCAGAGATCCTAATGCCAAGCCCATAAGGTACAAATATCCTGCTGCATATGATCCATATGGCCCTAGACCCCCACCATCAGACAAGATAGTACAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTAATTTGAAACAAATTTCAGTAAAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E369987" ref_strand="+" ref_description="SGN-E369987 [TUS-26-N5]">
      <seq>tgaagtggaaattatccgagttcttttgcattagcacaacacgcgtatgaaattctgatcaagctaacatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacctgtacagctcttcgtgaaattatagggcctctgcagtctcgttcgtttcaacctgattttgttcccagagatcctaatgtcaagcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctactttgaaaccaatttcagtagaaggcatggatttgggtgcaatgggaggagcaggtggtggaccggcaaaggctgaggagaagaaggttgagaaaacagcatttgacgtgaagttagagaaatttgatgcagctgcgaaaatcaaggtgatcaaagaggttagatccttcacgagtctaggtctgaaggaagccaaggaccttgtcgaaaaggttcctgctatacttaagncaggagtaaccaaagaggaagctaatgaaataatagaaaagatcaaagctgttggaggagtcgccgttatggagtaacaacaatctctgttggattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="68827" stop="70139"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69127" g_stop="69839" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="713" r_length="713" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E369987" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69127" e_stop="69839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTT</genome_strand>
        <mrna_strand>TGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGNCAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E262560" ref_strand="+" ref_description="SGN-E262560 [cLEG-63-G8]">
      <seq>tgaagtggaaattatccgagttcttttgcattagcacaacacgcgtatgaaattctgatcaagctaacatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacctgtacagctcttcgtgaaattatagggcctctgcagtctcgttcgtttcaacctgattttgttcccagagatcctaatgtcaagcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctactttgaaaccaatttcagtagaaggcatggatttgggtgcaatgggaggagcaggtggtggaccggcaaaggctgaggagaagaaggttgagaaaacagcatttgacgtgaagttagagaaatttgatgcagctgcgaaaatcaaggtgatcaaagaggttagatccttcacgagtctaggtctgaaagagccaaggacccttgtcgaaaggttcctgctatacttaagcaaggagtaaccaaagaggaagctatggaataatagaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="68827" stop="70083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69127" g_stop="69783" g_length="657"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E262560" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262560" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69127" e_stop="69783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGA-CCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAG</genome_strand>
        <mrna_strand>TGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAAG-AGCCAAGGACCCTTGTCG-AAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCT-ATGGAATAATAGAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E254785" ref_strand="+" ref_description="SGN-E254785 [cLEG-33-A22]">
      <seq>tgaagtggaaattatccgagttcttttgcattagcacaacacgcgtatgaaattctgatcaagctaacatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacctgtacagctcttcgtgaaattatagggcctctgcagtctcgttcgtttcaacctgattttgttcccagagatcctaatgtcaagcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctactttgaaaccaatttcagtagaaggcatggatttgggtgcaatgggaggagcaggtggtggaccggcaaaggctgaggagaagaaggttgagaaaacagcatttgacgtgaagttagagaaatttgatgcagctgcgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="68827" stop="69951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69127" g_stop="69651" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E254785" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69127" e_stop="69651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAA</genome_strand>
        <mrna_strand>TGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E259547" ref_strand="+" ref_description="SGN-E259547 [cLEG-42-L19]">
      <seq>tgaagtggaaattatccgagttcttttgcattagcacaacacgcgtatgaaattctgatcaagctaacatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacctgtacagctcttcgtgaaattatagggcctctgcagtctcgttcgtttcaacctgattttgttcccagagatcctaatgtcaagcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctactttgaaaccaatttcagtagaaggcatggatttgggtgcaatgggaggagcaggtggtggaccggcaaaggctgaggagaagaaggttgagaaaacagcatttgacgtgaagttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="68827" stop="69928"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69127" g_stop="69628" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E259547" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259547" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69127" e_stop="69628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAG</genome_strand>
        <mrna_strand>TGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E260421" ref_strand="+" ref_description="SGN-E260421 [cLEG-66-A17]">
      <seq>cgaagtggaaattatccgagttcttttgcattagcacaacacgcgtatgaaattctgatcaagctaacatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacctgtacagctcttcgtgaaattatagggcctctgcagtctcgttcgtttcaacctgattttgttcccagagatcctaatgtcaagcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaagcaccctactttgaaaccaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="68828" stop="69826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69127" g_stop="69526" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E260421" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260421" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69127" e_stop="69526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTT</genome_strand>
        <mrna_strand>CGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAAGCACCCTACTTTGAAACCAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E281948" ref_strand="+" ref_description="SGN-E281948 [cLES-2-L24]">
      <seq>gcgtatgaaattctgatcaagctaacatcatttgcaattcattgcttggaaagtgatatcttaagcatgaagctcatagcacggttaagacccatccaaacctgtacagctcttcgtgaaattatagggcctctgcagtctcgttcgtttcaacctgattttgttcccagagatcctaatgtcaagcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctactttgaaaccaatttcagtagaaggcatggatttgggtgcaatgggaggagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="68869" stop="69863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69169" g_stop="69563" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E281948" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E281948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69169" e_stop="69563"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGC</genome_strand>
        <mrna_strand>GCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E472552" ref_strand="+" ref_description="SGN-E472552 [cSTB-29-K9]">
      <seq>atccaaacatgtacagctcttcgtgaaattatagggcctctgcagtctcgttcatttcaacctgattttgttcccagagatcctaatgccaatcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacctccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaagacatcctactttgaaacaaatttcagtagaaggcatggatttgggtgcaatgggaggagcaggtggtggaccggcaaaggctgaggagaagaaggtagagaaaacagcatttgacgtcaagttggagaaatttgatgcagctgcaaaaatcaaggtgatcaaagaggttcgatccttcacgagtctaggtctaaaggaagccaaggaactggtcgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="68962" stop="70020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69262" g_stop="69720" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="459" r_length="459" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E472552" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E472552" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69262" e_stop="69720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAA</genome_strand>
        <mrna_strand>ATCCAAACATGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCATTTCAACCTGATTTTGTTCCCAGAGATCCTAATGCCAATCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCTCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGACATCCTACTTTGAAACAAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTAGAGAAAACAGCATTTGACGTCAAGTTGGAGAAATTTGATGCAGCTGCAAAAATCAAGGTGATCAAAGAGGTTCGATCCTTCACGAGTCTAGGTCTAAAGGAAGCCAAGGAACTGGTCGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E259228" ref_strand="+" ref_description="SGN-E259228 [cLEG-43-H21]">
      <seq>acggagagatcctaatgtcaagcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctactttgaaaccaatttcagtagaaggcatggatttgggtgcaatgggaggagcaggtggtggaccggcaaaggctgaggagaagaaggttgagaaaacagcatttgacgtgaagttagagaaatttgatgcagctgcgaaaatcaaggtgatcaaagaggttagatccttcacgagtctaggtctgaaggaagccaaggaccttgtcgaaaaggttcctgctatacttaagcaaggagtaaccaaagaggaagctaatgaaataatagaaaagatcaaagctgttggaggagtcgccgttatggagtaacaacaatctctgttggatttagcaggttccctcatcctgcatttcttcttttttcacaacggaacatgccaaaattaacataatttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="69037" stop="70208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69333" g_stop="69908" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="576" r_length="576" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E259228" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259228" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69333" e_stop="69908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTTAGCAGGTTCCCTCATCCTGCATTTCTTCTTTTTTCACAACGGAACATGCCAAAATTAACATAATTTCTC</genome_strand>
        <mrna_strand>ACGGAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTTAGCAGGTTCCCTCATCCTGCATTTCTTCTTTTTTCACAACGGAACATGCCAAAATTAACATAATTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E258766" ref_strand="+" ref_description="SGN-E258766 [cLEG-50-G12]">
      <seq>acggagagatcctaatgtcaagcccataaggtacaaatatcctgctgcctatgatccatatggcccgagacccccaccatcagacaagatagttcagcttgctgaacgtattgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctactttgaaaccaatttcagtagaaggcatggatttgggtgcaatgggaggagcaggtggtggaccggcaaaggctgaggagaagaaggttgagaaaacagcatttgacgtgaagttagagaaatttgatgcagctgcgaaaatcaaggtgatcaaagaggttagatccttcacgagtctaggtctgaaggaagccaaggaccttgtcgaaaaggttcctgctatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="69037" stop="70038"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69333" g_stop="69738" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="406" r_length="406" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E258766" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>406</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E258766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69333" e_stop="69738"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTT</genome_strand>
        <mrna_strand>ACGGAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E353860" ref_strand="+" ref_description="SGN-E353860 [cTOS-10-L16]">
      <seq>attgctgctttagccccagaagaacgtagacaaattggtcctttactcagggagatactaaggcaccctactttgaaaccaatttcagtagaaggcatggatttgggtgcaatgggaggagcaggtggtggaccggcaaaggctgaggagaagaaggttgagaaaacagcatttgacgtgaagttagagaaatttgatgcagctgcgaaaatcaaggtgatcaaagaggttagatccttcacgagtctaggtctgaaggaagccaaggaccttgtcgaaaaggttcctgctatacttaagcaaggagtaaccaaagaggaagctaatgaaataatagaaaagatcaaagctgttggaggagtcgccgttatggagtaacaacaatctctgttggatttagcaggttccctcatcctgcatttcttcttttttcacaacggaacatgccaaaattaacataatttctctttgttggatttagtttcttgggttaggacgatcacgttttgtttaataggtttcgtgctttttacagctttgaataggcatgttgattacaatattttgtatctgatcttgctgctagactgttaagaattcgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="69142" stop="70348"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69442" g_stop="70052" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="611" r_length="611" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E353860" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353860" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69442" e_stop="70052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTTAGCAGGTTCCCTCATCCTGCATTTCTTCTTTTTTCACAACGGAACATGCCAAAATTAACATAATTTCTCTTTGTTGGATTTAGTTTCTTGGGTTAGGACGATCACGTTTTGTTTAATAGGTTTCGTGCTTTTTACAGCTTTGAATAGGCATGTTGATTACAATATTTTGTATCTGATCTTGCTGCTAGACTGTTAAGAATTCGAAATAATCTC</genome_strand>
        <mrna_strand>ATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTTAGCAGGTTCCCTCATCCTGCATTTCTTCTTTTTTCACAACGGAACATGCCAAAATTAACATAATTTCTCTTTGTTGGATTTAGTTTCTTGGGTTAGGACGATCACGTTTTGTTTAATAGGTTTCGTGCTTTTTACAGCTTTGAATAGGCATGTTGATTACAATATTTTGTATCTGATCTTGCTGCTAGACTGTTAAGAATTCGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E292488" ref_strand="+" ref_description="SGN-E292488 [cLET-16-O18]">
      <seq>aaaacagcatttgacgtgaagttagagaaatttgatgcagctgcgaaaatcaaggtgatcaaagaggttagatccttcacgagtctaggtctgaaggaagccaaggaccttgtcgaaaaggttcctgctatacttaagcaaggagtaaccaaagaggaagctaatgaaataatagaaaagatcaaagctgttggaggagtcgccgttatggagtaacaacaatctctgttggatttagcaggttccctcatcctgcatttcttcttttttcacaacggaacatgccaaaattaacataatttctctttgttggatttagtttcttgggttaggacgatcacgttttgtttaataggtttcgtgctttttacagctttgaataggcatgttgattacaatattttgtatctgatcttgctgctagactgttaagaattcgaaataatctcgtggaattaatttaggtgcacttgagcttgcccctaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="69304" stop="70391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69604" g_stop="70091" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E292488" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E292488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69604" e_stop="70091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTTAGCAGGTTCCCTCATCCTGCATTTCTTCTTTTTTCACAACGGAACATGCCAAAATTAACATAATTTCTCTTTGTTGGATTTAGTTTCTTGGGTTAGGACGATCACGTTTTGTTTAATAGGTTTCGTGCTTTTTACAGCTTTGAATAGGCATGTTGATTACAATATTTTGTATCTGATCTTGCTGCTAGACTGTTAAGAATTCGAAATAATCTCGTGGAATTAATTTAGGTGCACTTGAGCTTGCCCCTAACA</genome_strand>
        <mrna_strand>AAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTTAGCAGGTTCCCTCATCCTGCATTTCTTCTTTTTTCACAACGGAACATGCCAAAATTAACATAATTTCTCTTTGTTGGATTTAGTTTCTTGGGTTAGGACGATCACGTTTTGTTTAATAGGTTTCGTGCTTTTTACAGCTTTGAATAGGCATGTTGATTACAATATTTTGTATCTGATCTTGCTGCTAGACTGTTAAGAATTCGAAATAATCTCGTGGAATTAATTTAGGTGCACTTGAGCTTGCCCCTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E369986" ref_strand="+" ref_description="SGN-E369986 [TUS-26-N5]">
      <seq>tttttttttttatttcgaattcttaacagtctagcagcaagatcagatacaaaatattgtaatcaacatgcctattcaaagctgtaaaaagcacgaaacctattaaacaaaacgtgatcgtcctaacccaagaaactaaatccaacaaagagaaattatgttaattttggcatgttccgttgtgaaaaaagaagaaatgcaggatgagggaacctgctaaatccaacagagattgttgttactccataacggcgactcctccaacagctttgatcttttctattatttcattagcttcctctttggttactccttgcttaagtatagcaggaaccttttcgacaaggtccttggcttccttcagacctagactcgtgaaggatctaacctctttgatcaccttgattttcgcagctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="70348" stop="69339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70049" g_stop="69639" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="419" r_length="411" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E369986" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369986" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70049" e_stop="69639"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTTCGAATTCTTAACAGTCTAGCAGCAAGATCAGATACAAAATATTGTAATCAACATGCCTATTCAAAGCTGTAAAAAGCACGAAACCTATTAAACAAAACGTGATCGTCCTAACCCAAGAAACTAAATCCAACAAAGAGAAATTATGTTAATTTTGGCATGTTCCGTTGTGAAAAAAGAAGAAATGCAGGATGAGGGAACCTGCTAAATCCAACAGAGATTGTTGTTACTCCATAACGGCGACTCCTCCAACAGCTTTGATCTTTTCTATTATTTCATTAGCTTCCTCTTTGGTTACTCCTTGCTTAAGTATAGCAGGAACCTTTTCGACAAGGTCCTTGGCTTCCTTCAGACCTAGACTCGTGAAGGATCTAACCTCTTTGATCACCTTGATTTTCGCAGCTGCA</genome_strand>
        <mrna_strand>TTTATTTCGAATTCTTAACAGTCTAGCAGCAAGATCAGATACAAAATATTGTAATCAACATGCCTATTCAAAGCTGTAAAAAGCACGAAACCTATTAAACAAAACGTGATCGTCCTAACCCAAGAAACTAAATCCAACAAAGAGAAATTATGTTAATTTTGGCATGTTCCGTTGTGAAAAAAGAAGAAATGCAGGATGAGGGAACCTGCTAAATCCAACAGAGATTGTTGTTACTCCATAACGGCGACTCCTCCAACAGCTTTGATCTTTTCTATTATTTCATTAGCTTCCTCTTTGGTTACTCCTTGCTTAAGTATAGCAGGAACCTTTTCGACAAGGTCCTTGGCTTCCTTCAGACCTAGACTCGTGAAGGATCTAACCTCTTTGATCACCTTGATTTTCGCAGCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E243215" ref_strand="+" ref_description="SGN-E243215 [cLEE-2-E2]">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="70239" stop="71275"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70539" g_stop="70955" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="419" r_length="419" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E243215" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70539" e_stop="70955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGTAGATGACCAAATTTTTTCTTCGCATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTATTTTTTGTTCTTTAAACTAAGGAATGTAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACTCCTAAATATTTTTTTT-AAAAAAAA-TAGAACTAATAAATATAAATTTAAAACTAATCTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGCTATTTTGTAACGGCAGGGATATATGTGAGCCGTTTGTATAATGGTAAGGGTATATATGTGCCACTTTTATAACGAGGG-TATATCAGCTC-CAATGACAAAGTTGAGG</genome_strand>
        <mrna_strand>TTATTGTAGATGACC-AATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATG-AAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E256254" ref_strand="+" ref_description="SGN-E256254 [cLEG-37-N1]">
      <seq>aacaaccctgccgcaagtcctggaattgatttaactgtcacagttcttacaactgggttctggcctagttataaatcttctgatttgtgtctccctgtggaaatggtgaagtgtgtagaagtcttcaaggaattctatcagacaaaaacgaaacacaggaaattgacatggatttattcattgggtacgtgtaacatcaacgggaagtttgattcaaaaaccattgaactgattctgggaacttatcaggctgctgttttgttattgtttaattcttcagatagattgagttactcagaaatcaagagtcagttaaatttggctgatgatgacttgatcagattgcttcagtccctttcatgtgccaagtataaaattctgatcaaggaacctagcaatagaactgtttcttcttctgatcattttgagttcaactccaagttcactgacaggatgaggcggattagggtcccattacctcctgtggatgaaaggaaaaaggtagtcgaggatgtagacaaagatagacgttatgcaattgatgcctgtatcgtgcgcattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="74274" stop="73122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73973" g_stop="73422" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="564" r_length="552" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E256254" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E256254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73973" e_stop="73422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAGTACTGGAATTGATCTAACTGTCACAGTACTTACAAGTGGGTTCTGGCCTAGCTATAAATCTTGTGATTTGAGTCTACCTGTCGAGATGGCTAAGTGTGTACAAGTCTTCAACGAATTCTATCAGACAACAACGAAACACAGGAAACTGACATGGATTTATTCATTGGGTACGTGTAACGTCATTGGGAAGTTTGATTCAAAAACCATTGAATTGATTCTGGGAACCTATCAGGCTGCTGTTCTGTCATTGTTTAATTCGTCAGATAGATTGAGTTACTCGGAAATCAAAAGTCAGTTAAATTTAGCTGATGATGACTTGATCAGATTGCTTCAATCTCTTTCATGTGCTAAGTATAAAATTCTGATTAAAGATCCTAGCAATGCAACTGTTACATCATCTGATCATTTCGAGTTCAACTCCAAGTTCACTGACAGGATGAGACGGGTTAGGGTACCGTTACCTCTTGTGGATGAAAGGAAAAAGGTGGTGGAGGATGTAGGCAAAGATAGACGTTATGCAATCGATGCATGTATAGTACGTATTATG</genome_strand>
        <mrna_strand>GCAAGTCCTGGAATTGATTTAACTGTCACAGTTCTTACAACTGGGTTCTGGCCTAGTTATAAATCTTCTGATTTGTGTCTCCCTGTGGAAATGGTGAAGTGTGTAGAAGTCTTCAAGGAATTCTATCAGACAAAAACGAAACACAGGAAATTGACATGGATTTATTCATTGGGTACGTGTAACATCAACGGGAAGTTTGATTCAAAAACCATTGAACTGATTCTGGGAACTTATCAGGCTGCTGTTTTGTTATTGTTTAATTCTTCAGATAGATTGAGTTACTCAGAAATCAAGAGTCAGTTAAATTTGGCTGATGATGACTTGATCAGATTGCTTCAGTCCCTTTCATGTGCCAAGTATAAAATTCTGATCAAGGAACCTAGCAATAGAACTGTTTCTTCTTCTGATCATTTTGAGTTCAACTCCAAGTTCACTGACAGGATGAGGCGGATTAGGGTCCCATTACCTCCTGTGGATGAAAGGAAAAAGGTAGTCGAGGATGTAGACAAAGATAGACGTTATGCAATTGATGCCTGTATCGTGCGCATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E235645" ref_strand="+" ref_description="SGN-E235645 [cLED-15-A12]">
      <seq>ggaacttatcaggctgctgttttgttattgtttaattcttcagatagattgagttactcagaaatcaagagtcagttaaatttggctgatgatgacttgatcagattgcttcagtccctttcatgtgccaagtataaaattctgatcaaggaacctagcaatagaactgtttcttcttctgatcattttgagttcaactccaagttcactgacaggatgaggcggattagggtcccattacctgctgtggatgaaaggaaaaaggtagtcgaggatgtagacaaagatagacgttatgcaattgatgcctgtatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="74048" stop="73133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73748" g_stop="73433" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E235645" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235645" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73748" e_stop="73433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACCTATCAGGCTGCTGTTCTGTCATTGTTTAATTCGTCAGATAGATTGAGTTACTCGGAAATCAAAAGTCAGTTAAATTTAGCTGATGATGACTTGATCAGATTGCTTCAATCTCTTTCATGTGCTAAGTATAAAATTCTGATTAAAGATCCTAGCAATGCAACTGTTACATCATCTGATCATTTCGAGTTCAACTCCAAGTTCACTGACAGGATGAGACGGGTTAGGGTACCGTTACCTCTTGTGGATGAAAGGAAAAAGGTGGTGGAGGATGTAGGCAAAGATAGACGTTATGCAATCGATGCATGTATAG</genome_strand>
        <mrna_strand>GGAACTTATCAGGCTGCTGTTTTGTTATTGTTTAATTCTTCAGATAGATTGAGTTACTCAGAAATCAAGAGTCAGTTAAATTTGGCTGATGATGACTTGATCAGATTGCTTCAGTCCCTTTCATGTGCCAAGTATAAAATTCTGATCAAGGAACCTAGCAATAGAACTGTTTCTTCTTCTGATCATTTTGAGTTCAACTCCAAGTTCACTGACAGGATGAGGCGGATTAGGGTCCCATTACCTGCTGTGGATGAAAGGAAAAAGGTAGTCGAGGATGTAGACAAAGATAGACGTTATGCAATTGATGCCTGTATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E315321" ref_strand="+" ref_description="SGN-E315321 [cTOA-24-L23]">
      <seq>ttagacttgacgaataaaattaattcttcaaaggccttgtacatatctcactttgaggctatgcaaaatgtagtgaagctgcataaagccacttctaatgctgctctggaggaaatttcgactttggcttcttctaattcaatttccactaaagaatttttagatgcagagtctgttgaaacaaatttaatttttgatgaacttcagaacactctgtcaacccaccaaggagaaatggcaaattttgctagagagcttcgtcagagatttaatgacagtacagagcatttgacaaatatctctgagatcatacaaggattttttgacaaacttttagaagaatcaaaaagacttgaaagacattcaacaacagctgatgagattcaaacgaagtctattgctgaatttgagaaggcatatgaggagcaatcaagatcagatgcagaaaagcttattgctgaggtgacttccttggtctcgaatcacatgcgtcgccaaaagaaactggttggtgcaaggcttggtgatcttagagaaactgtttctggaaataagacattcttggatgggcatgtatcctctatggaaggtattacaacagatacaaaaagaaaatggcaggacttttatacgcaagcagaaggtgagaccaaagaaaatgctgatttctcagctgctaaacattgccga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="82134" stop="83843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82434" g_stop="82589" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82590" i_stop="82703" i_length="114">
            <donor d_prob="0.488" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82704" g_stop="82811" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="264" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82812" i_stop="82959" i_length="148">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82960" g_stop="83118" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="423" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83119" i_stop="83190" i_length="72">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83191" g_stop="83274" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="507" r_length="84" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="83275" i_stop="83360" i_length="86">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="83361" g_stop="83543" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="690" r_length="183" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E315321" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315321" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82434" e_stop="82589"/>
          <exon e_start="82704" e_stop="82811"/>
          <exon e_start="82960" e_stop="83118"/>
          <exon e_start="83191" e_stop="83274"/>
          <exon e_start="83361" e_stop="83543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGACTTGACGAATAAAATTAATTCTTCAAAGGCCTTGTACATATCTCACTTTGAGGCTATGCAAAATGTAGTGAAGCTGCATAAAGCCACTTCTAATGCTGCTCTGGAGGAAATTTCGACTTTGGCTTCTTCTAATTCAATTTCCACTAAAGAAGTATGACATGAAAGTTTTGCTTTCAGCTTCTGATGTATTTGGATTTCTGTCCATGTAAAATAATAGATGTATTTGTGATTTGAATATCTTTCTTTCTTCCTCTACTTGTTGCAGTTTTTAGATGCAGAGTCTGTTGAAACAAATTTAATTTTTGATGAACTTCAGAACACTCTGTCAACCCACCAAGGAGAAATGGCAAATTTTGCTAGAGAGCTTCGTCAGGTTTCCTTATGCACTTTACTTGTAAATTTTGATTGATAATCAACACTTATTACATCCAGAGATTTGGTAGTTAAAGTTCATTTGAGGATATAGTTCTGCATTTTTCATTCTTTTCATGTTCATCATTGTTTTTTTTCCAATCATGTAGAGATTTAATGACAGTACAGAGCATTTGACAAATATCTCTGAGATCATACAAGGATTTTTTGACAAACTTTTAGAAGAATCAAAAAGACTTGAAAGACATTCAACAACAGCTGATGAGATTCAAACGAAGTCTATTGCTGAATTTGAGAAGGCATATGAGGTATGCCTTATAGACCTGATACAACAATGTTGTTGTTCCTCTAATTTTGATGTCTGTGTTTGTCTACTTTAGGAGCAATCAAGATCAGATGCAGAAAAGCTTATTGCTGAGGTGACTTCCTTGGTCTCGAATCACATGCGTCGCCAAAAAGAACTGGTTTGTTTTTTACTCTATGATCTCCAATCTTATGTAATATACATATGATCTTTCTTCTGTTCCCTTTCTCAAAGTCTACCTGACAGGTTGGTGCAAGGCTTGGTGATCTTAGAGAAACTGTTTCTGGAAATAAGACATTCTTGGATGGGCATGTATCCTCTATGGAAGGTATTACAACAGATACAAAAAGAAAATGGCAGGACTTTTATACGCAAGCAGAAGGTGAGACCAAAGAAAATGCTGATTTCTCAGCTGCTAAACATTGCCGA</genome_strand>
        <mrna_strand>TTAGACTTGACGAATAAAATTAATTCTTCAAAGGCCTTGTACATATCTCACTTTGAGGCTATGCAAAATGTAGTGAAGCTGCATAAAGCCACTTCTAATGCTGCTCTGGAGGAAATTTCGACTTTGGCTTCTTCTAATTCAATTTCCACTAAAGAA..................................................................................................................TTTTTAGATGCAGAGTCTGTTGAAACAAATTTAATTTTTGATGAACTTCAGAACACTCTGTCAACCCACCAAGGAGAAATGGCAAATTTTGCTAGAGAGCTTCGTCAG....................................................................................................................................................AGATTTAATGACAGTACAGAGCATTTGACAAATATCTCTGAGATCATACAAGGATTTTTTGACAAACTTTTAGAAGAATCAAAAAGACTTGAAAGACATTCAACAACAGCTGATGAGATTCAAACGAAGTCTATTGCTGAATTTGAGAAGGCATATGAG........................................................................GAGCAATCAAGATCAGATGCAGAAAAGCTTATTGCTGAGGTGACTTCCTTGGTCTCGAATCACATGCGTCGCCAAAAGAAACTG......................................................................................GTTGGTGCAAGGCTTGGTGATCTTAGAGAAACTGTTTCTGGAAATAAGACATTCTTGGATGGGCATGTATCCTCTATGGAAGGTATTACAACAGATACAAAAAGAAAATGGCAGGACTTTTATACGCAAGCAGAAGGTGAGACCAAAGAAAATGCTGATTTCTCAGCTGCTAAACATTGCCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E320551" ref_strand="+" ref_description="SGN-E320551 [cTOB-22-G18]">
      <seq>aggacttttatacgcaagcagaaggtgagaccaaagaaaatgctgatttctcagctgctaaacattgccgaatggagttactcatgcagaagtgtgtaagcacaagtgaaacaactgtgaaacggtggcaaagtactcatgaattggcaaaagacatgtgcaatcaacatgtttcaacaatgcattcagttgtcaggaacctatgcgatagcaatgagcaacatgttattgaattcgattccacaagggaagctgctgaagaagctgtgaaaaggaatagtgaagatatcattaaatctattgacggcttgtcaggggaagagagaggatctatatctggcattctggatactgccagtgcacactcggagaccctagatgaacttaagaaagatcattgcacacagtctacctccattgaacagaaggccattgaaacatttcagcagaagtttatggattatgagccaactggaacaacaccaattaggtctgaaccagatgtaccaagcaagggaacaattgagtcgttgcgagccatgccaatggagactctactagaggaatttcgagagaacattcattggagtccttccagtaaaggaactaaagccatcacttataccacgatctcctctctcactgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="83173" stop="86024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83473" g_stop="83566" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83567" i_stop="83768" i_length="202">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83769" g_stop="83870" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="196" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83871" i_stop="84595" i_length="725">
            <donor d_prob="0.861" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84596" g_stop="84705" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="306" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84706" i_stop="85088" i_length="383">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85089" g_stop="85240" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="458" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="85241" i_stop="85533" i_length="293">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85534" g_stop="85724" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="647" r_length="189" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E320551" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E320551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83473" e_stop="83566"/>
          <exon e_start="83769" e_stop="83870"/>
          <exon e_start="84596" e_stop="84705"/>
          <exon e_start="85089" e_stop="85240"/>
          <exon e_start="85534" e_stop="85724"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGACTTTTATACGCAAGCAGAAGGTGAGACCAAAGAAAATGCTGATTTCTCAGCTGCTAAACATTGCCGAATGGAGTTACTCATGCAGAAGTGGTAAGTATCTGAATTTGCACCTTATATATGTGATTTTGCAAATTCTGCTAAGTTTCAGTAGTTGTTATTTGGTTAACTCAACTCTGATCTGAATTTGTTGGCCTTTTTCAACGAATAGTTGTTTCTCCTTTACTCTATTTCATTTTAAATATATTTGCTTCTATTTTTTCCGTAAGCAATTGTGTCTGGCTTTTCTATCCAGTGTAAGCACAAGTGAAACAACTGTGAAACGGTGGCAAAGTACTCATGAATTGGCAAAAGACATGTGCAATCAACATGTTTCAACAATGCATTCAGTTGTCAGGTGAACTTTCGATGTTACTTGATATTTTATTCTGCCTGAAGAGAGCAGATAAGTAACACATTGGTTATATAAATGAAAGATGTTTTGTAAATATATAAGAATTAAACTCCTTAGTCTGAAAAGTAAATTGTCTAAAGCTATTTTAAACATTTTATTTCGTTTATTTATGACAAGAAAACTGCCTTCCTTTGCAAACAGATAAATAGAAATAAACAACAGTTGTAATATTCCTACCACCATCTAATTAAATTGTTGATTGGGAAGGTTTCCAAGTTTTTGTACAATTTTCAGTTCCTTTTTTTTGCCTATTAACACTGTTAGCTAAAGAAACTATTTTTGGAAATGTGTTTCCTATTTATTGAGACAACTTCATTGGAGCTGGGAATGAGAGTGTTCTCATGGATGTTATGTATTATTTTGTACTGGTGAAAGACAACCATCAAGTAATTGAAATTTGTTGGGACTTGGGAGAATATAAGATAATTGCCTATATCTAGAAGCGCTTGGGGAATTTGTGAGTGGTTACACTTTGTATTGTTAGCAAGAATGGATCTCGGAAGGTTTATGTCAAATTACAGAACATGAGCCTGCAGAAATATAATGTATATTGACTATGGTGTTGGGTATTGAAAAGCAAATACGAGCTTATTACTTTTTTTTGAAGAGAAATTTGAGCACTGCATCCTACATCATTATGACATCCCTTTTTTTTCTTGCTGTTACAGGAACCTATGCGATAGCAATGAGCAACATGTTATTGAATTCGATTCCACAAGGGAAGCTGCTGAAGAAGCTGTGAAAAGGAATAGTGAAGATATCATTAAATCTATTGACGGTAAGTTTTTAAAAATTTGTCTAGTATGTTCTGATTTTGGGTCGTCGCTCTTGAGTTTTTTAAAAAAGAACAAAAGGTAGGCATGCTGTTCAATACTAAAGAAACTCTTCTATAGATAGGCATTTAGTTAGACATTTTGGAAGTAAATTGTGCTCATACAAGCAATAATTCTAACATGGTAAATGATGTAGCACATTTCATTGTAGATTATCTAGTTTCGTCTGTCATGATTAGTTCATATTTTGGTTTGGGTGCTGCTGCCAAGTAGTAATTTTTTCAGGAAAGTAACTTATACAATGGTGTCTTTTTTATGGTTGGCGTGATTTGGTGATGACTATTATGTGCTGTTTTGTAATGTTTCTCCTGGTTTCATTCTTATCCAGGCTTGTCAGGGGAAGAGAGAGGATCTATATCTGGCATTCTGGATACTGCCAGTGCACACTCGGAGACCCTAGATGAACTTAAGAAAGATCATTGCACACAGTCTACCTCCATTGAACAGAAGGCCATTGAAACATTTCAGCAGAAGTTTATGGTATGTTGATCAAGAATCTTACTATACTTTTAAAATGTTCAGGACTCTTTGCTGTTGGTTAGAAGATAAGACAATGCTGTCATACACCATTTTCCGCATAAGTAGTGCAGTTCTGTTGGCCGAATAAGAAAAATAAATCCCTATATACCTAATACCTGTTTAGTTGACGTTATTAGATAATAGAAACACTAAGCTAATAATCCATTCGTAGCTCTTGTCATTTTCTAGCTAAGAAAAGACGTTGTACTGTGTACTTGTGCTGAACTTTTATTACTTTTCTGATTGATTTTCAGGATTATGAGCCAACTGGAACAACACCAATTAGGTCTGAACCAGATGTACCAAGCAAGGGAACAATTGAGTCGTTGCGAGCCATGCCAATGGAGACTCTACTAGAGGAATTTCGAGAGAACAATTCATTGGAGTCCTTCCAAGTAAAGGAACTAAAGCCATCACTTATACCACGATCTCCTCTCTCACTGAT</genome_strand>
        <mrna_strand>AGGACTTTTATACGCAAGCAGAAGGTGAGACCAAAGAAAATGCTGATTTCTCAGCTGCTAAACATTGCCGAATGGAGTTACTCATGCAGAAGTG..........................................................................................................................................................................................................TGTAAGCACAAGTGAAACAACTGTGAAACGGTGGCAAAGTACTCATGAATTGGCAAAAGACATGTGCAATCAACATGTTTCAACAATGCATTCAGTTGTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCTATGCGATAGCAATGAGCAACATGTTATTGAATTCGATTCCACAAGGGAAGCTGCTGAAGAAGCTGTGAAAAGGAATAGTGAAGATATCATTAAATCTATTGACG...............................................................................................................................................................................................................................................................................................................................................................................................GCTTGTCAGGGGAAGAGAGAGGATCTATATCTGGCATTCTGGATACTGCCAGTGCACACTCGGAGACCCTAGATGAACTTAAGAAAGATCATTGCACACAGTCTACCTCCATTGAACAGAAGGCCATTGAAACATTTCAGCAGAAGTTTATG.....................................................................................................................................................................................................................................................................................................GATTATGAGCCAACTGGAACAACACCAATTAGGTCTGAACCAGATGTACCAAGCAAGGGAACAATTGAGTCGTTGCGAGCCATGCCAATGGAGACTCTACTAGAGGAATTTCGAGAGAAC-ATTCATTGGAGTCCTTCC-AGTAAAGGAACTAAAGCCATCACTTATACCACGATCTCCTCTCTCACTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E320465" ref_strand="+" ref_description="SGN-E320465 [cTOB-22-F18]">
      <seq>aggacttttatacgcaagcagaaggtgagaccaaagaaaatgctgatttctcagctgctaaacattgccgaatggagttactcatgcagaagtgtgtaagcacaagtgaaacaactgtgaaacggtggcaaagtactcatgaattggcaaaagacatgtgcaatcaacatgtttcaacaatgcattcagttgtcacgaacctatgcgatagcaatgagcaacatgttattgaattcgattccacaagggaagctgctgaacaagctgtgagaaggaatagtgaagatatcattaaatctattgacggcttgtcaagggaagagagaggatctatatctggcattctggatactgccagtgcacactcggagaccctagatgaacttaagaaagatcattgcacacagtctacctccattgaacagaaggccattgaaacatttcagcagaagtttatggattatgagccaactggaacaacaccaattaggtctgaaccagatgtaccaagcaagggaacgattgagtcgttgcgagccatgccaatggagactctactagaggaatttcgagagaacaattcattggagtccttccagtaaaggaactaaagccatcacttataccacgatctcctctctcactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="83173" stop="86023"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83473" g_stop="83566" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83567" i_stop="83768" i_length="202">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83769" g_stop="83870" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="196" r_length="102" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83871" i_stop="84595" i_length="725">
            <donor d_prob="0.861" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84596" g_stop="84705" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="306" r_length="110" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84706" i_stop="85088" i_length="383">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85089" g_stop="85240" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="458" r_length="152" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="85241" i_stop="85533" i_length="293">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85534" g_stop="85723" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="647" r_length="189" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E320465" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E320465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83473" e_stop="83566"/>
          <exon e_start="83769" e_stop="83870"/>
          <exon e_start="84596" e_stop="84705"/>
          <exon e_start="85089" e_stop="85240"/>
          <exon e_start="85534" e_stop="85723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGACTTTTATACGCAAGCAGAAGGTGAGACCAAAGAAAATGCTGATTTCTCAGCTGCTAAACATTGCCGAATGGAGTTACTCATGCAGAAGTGGTAAGTATCTGAATTTGCACCTTATATATGTGATTTTGCAAATTCTGCTAAGTTTCAGTAGTTGTTATTTGGTTAACTCAACTCTGATCTGAATTTGTTGGCCTTTTTCAACGAATAGTTGTTTCTCCTTTACTCTATTTCATTTTAAATATATTTGCTTCTATTTTTTCCGTAAGCAATTGTGTCTGGCTTTTCTATCCAGTGTAAGCACAAGTGAAACAACTGTGAAACGGTGGCAAAGTACTCATGAATTGGCAAAAGACATGTGCAATCAACATGTTTCAACAATGCATTCAGTTGTCAGGTGAACTTTCGATGTTACTTGATATTTTATTCTGCCTGAAGAGAGCAGATAAGTAACACATTGGTTATATAAATGAAAGATGTTTTGTAAATATATAAGAATTAAACTCCTTAGTCTGAAAAGTAAATTGTCTAAAGCTATTTTAAACATTTTATTTCGTTTATTTATGACAAGAAAACTGCCTTCCTTTGCAAACAGATAAATAGAAATAAACAACAGTTGTAATATTCCTACCACCATCTAATTAAATTGTTGATTGGGAAGGTTTCCAAGTTTTTGTACAATTTTCAGTTCCTTTTTTTTGCCTATTAACACTGTTAGCTAAAGAAACTATTTTTGGAAATGTGTTTCCTATTTATTGAGACAACTTCATTGGAGCTGGGAATGAGAGTGTTCTCATGGATGTTATGTATTATTTTGTACTGGTGAAAGACAACCATCAAGTAATTGAAATTTGTTGGGACTTGGGAGAATATAAGATAATTGCCTATATCTAGAAGCGCTTGGGGAATTTGTGAGTGGTTACACTTTGTATTGTTAGCAAGAATGGATCTCGGAAGGTTTATGTCAAATTACAGAACATGAGCCTGCAGAAATATAATGTATATTGACTATGGTGTTGGGTATTGAAAAGCAAATACGAGCTTATTACTTTTTTTTGAAGAGAAATTTGAGCACTGCATCCTACATCATTATGACATCCCTTTTTTTTCTTGCTGTTACAGGAACCTATGCGATAGCAATGAGCAACATGTTATTGAATTCGATTCCACAAGGGAAGCTGCTGAAGAAGCTGTGAAAAGGAATAGTGAAGATATCATTAAATCTATTGACGGTAAGTTTTTAAAAATTTGTCTAGTATGTTCTGATTTTGGGTCGTCGCTCTTGAGTTTTTTAAAAAAGAACAAAAGGTAGGCATGCTGTTCAATACTAAAGAAACTCTTCTATAGATAGGCATTTAGTTAGACATTTTGGAAGTAAATTGTGCTCATACAAGCAATAATTCTAACATGGTAAATGATGTAGCACATTTCATTGTAGATTATCTAGTTTCGTCTGTCATGATTAGTTCATATTTTGGTTTGGGTGCTGCTGCCAAGTAGTAATTTTTTCAGGAAAGTAACTTATACAATGGTGTCTTTTTTATGGTTGGCGTGATTTGGTGATGACTATTATGTGCTGTTTTGTAATGTTTCTCCTGGTTTCATTCTTATCCAGGCTTGTCAGGGGAAGAGAGAGGATCTATATCTGGCATTCTGGATACTGCCAGTGCACACTCGGAGACCCTAGATGAACTTAAGAAAGATCATTGCACACAGTCTACCTCCATTGAACAGAAGGCCATTGAAACATTTCAGCAGAAGTTTATGGTATGTTGATCAAGAATCTTACTATACTTTTAAAATGTTCAGGACTCTTTGCTGTTGGTTAGAAGATAAGACAATGCTGTCATACACCATTTTCCGCATAAGTAGTGCAGTTCTGTTGGCCGAATAAGAAAAATAAATCCCTATATACCTAATACCTGTTTAGTTGACGTTATTAGATAATAGAAACACTAAGCTAATAATCCATTCGTAGCTCTTGTCATTTTCTAGCTAAGAAAAGACGTTGTACTGTGTACTTGTGCTGAACTTTTATTACTTTTCTGATTGATTTTCAGGATTATGAGCCAACTGGAACAACACCAATTAGGTCTGAACCAGATGTACCAAGCAAGGGAACAATTGAGTCGTTGCGAGCCATGCCAATGGAGACTCTACTAGAGGAATTTCGAGAGAACAATTCATTGGAGTCCTTCCAAGTAAAGGAACTAAAGCCATCACTTATACCACGATCTCCTCTCTCACTGA</genome_strand>
        <mrna_strand>AGGACTTTTATACGCAAGCAGAAGGTGAGACCAAAGAAAATGCTGATTTCTCAGCTGCTAAACATTGCCGAATGGAGTTACTCATGCAGAAGTG..........................................................................................................................................................................................................TGTAAGCACAAGTGAAACAACTGTGAAACGGTGGCAAAGTACTCATGAATTGGCAAAAGACATGTGCAATCAACATGTTTCAACAATGCATTCAGTTGTCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCTATGCGATAGCAATGAGCAACATGTTATTGAATTCGATTCCACAAGGGAAGCTGCTGAACAAGCTGTGAGAAGGAATAGTGAAGATATCATTAAATCTATTGACG...............................................................................................................................................................................................................................................................................................................................................................................................GCTTGTCAAGGGAAGAGAGAGGATCTATATCTGGCATTCTGGATACTGCCAGTGCACACTCGGAGACCCTAGATGAACTTAAGAAAGATCATTGCACACAGTCTACCTCCATTGAACAGAAGGCCATTGAAACATTTCAGCAGAAGTTTATG.....................................................................................................................................................................................................................................................................................................GATTATGAGCCAACTGGAACAACACCAATTAGGTCTGAACCAGATGTACCAAGCAAGGGAACGATTGAGTCGTTGCGAGCCATGCCAATGGAGACTCTACTAGAGGAATTTCGAGAGAACAATTCATTGGAGTCCTTCC-AGTAAAGGAACTAAAGCCATCACTTATACCACGATCTCCTCTCTCACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E354281" ref_strand="+" ref_description="SGN-E354281 [cTOS-16-P17]">
      <seq>ccaactggaacaacaccaattaggtctgaaccagatgtaccaagcaagggaacaattgagtcgttgcgagccatgccaatggagactctactagaggaatttcgagagaacaattcattggagtccttccaagtaaaggaactaaagccatcacttataccacgatctcctctctcactgattaacaattagcagattggtctcatcgttccctcgtgcatatgatcacttaatctgtatcggtattttccttgtatactgagtgaatactgcaaactgcagtatatattgtaggttgattggcacagtcttaaacaataaatcccaccttgggatttagaaaaatggctgtaaatgagtaactcttggtacatttatttagtaaaagatggtgctctctatgtaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="85243" stop="86247"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85543" g_stop="85946" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="404" r_length="404" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="405" polyA_stop="416"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E354281" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354281" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85543" e_stop="85946"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAACTGGAACAACACCAATTAGGTCTGAACCAGATGTACCAAGCAAGGGAACAATTGAGTCGTTGCGAGCCATGCCAATGGAGACTCTACTAGAGGAATTTCGAGAGAACAATTCATTGGAGTCCTTCCAAGTAAAGGAACTAAAGCCATCACTTATACCACGATCTCCTCTCTCACTGATTAACAATTAGCAGATTGGTCTCATCGTTCCCTCGTGCATATGATCACTTAATCTGTATCGGTATTTTCCTTGTATACTGAGTGAATACTGCAAACTGCAGTATATATTGTAGGTTGATTGGCACAGTCTTAAACAATAAATCCCACCTTGGGATTTAGAAAAATGGCTGTAAATGAGTAACTCTTGGTACATTTATTTAGTAAAAGATGGTGCTCTCTATGT</genome_strand>
        <mrna_strand>CCAACTGGAACAACACCAATTAGGTCTGAACCAGATGTACCAAGCAAGGGAACAATTGAGTCGTTGCGAGCCATGCCAATGGAGACTCTACTAGAGGAATTTCGAGAGAACAATTCATTGGAGTCCTTCCAAGTAAAGGAACTAAAGCCATCACTTATACCACGATCTCCTCTCTCACTGATTAACAATTAGCAGATTGGTCTCATCGTTCCCTCGTGCATATGATCACTTAATCTGTATCGGTATTTTCCTTGTATACTGAGTGAATACTGCAAACTGCAGTATATATTGTAGGTTGATTGGCACAGTCTTAAACAATAAATCCCACCTTGGGATTTAGAAAAATGGCTGTAAATGAGTAACTCTTGGTACATTTATTTAGTAAAAGATGGTGCTCTCTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E744748" ref_strand="+" ref_description="SGN-E744748 [GI|20372845]">
      <seq>attattcttcaatatctttctccaaaatcacaaaaaaaaaaaatggaattatttatgaaaaactcttctctttggggtttaaaattttatttattttgcttatttataattttatcaaacattaatagggcatttgcttctcataatatttttttggacttgcaatcttcaagtgctattagtgtcaagaatgttcatagaactcgttttcattttcaacctcctaaacattggattaatgaccctaatgcaccaatgtattataatggagtgtatcatttattctatcaatacaatccaaaaggatcagtatggggcaatattatttgggctcattcagtctcaaaagacttgataaattggatccatttagaacctgcaatttatccatccaaaaaatttgacaagtatggtacttggtctggatcatcaactattttacctaataacaaacctgttatcatatacaccggagtagtagattcgtataataatcaagtccagaactacgccatcccggctaacctatctgatccatttcttcgtaaatggatcaaacctaacaacaacccgttgatcgtccctgataacagtatcaatagaactgagtttcgcgatccaactacagcttggatgggccaagatgggctttggaggattttaatagcaagtatgagaaaacatagagggatggcattgttgtatagaagtagagattttatgaaatggatcaaagcccaacatccacttcattcatctactaatactggaaattgggagtgtcctgattttttccctgtattatttaatagtaccaatggtttagatgtatcgtatcgcggaaaaaatgttaaatatgtcctcaagaatagtcttgatgttgctaggtttgattattacactattggcatgtatcacaccaaaatagataggtatattccgaataacaattcaattgatggttggaagggattgagaatcgactatggtaatttctatgcatcgaagacattctatgatcctagcagaaatcgaagggttatttggggttggtcaaatgaatccgatgtattacctgacgatgaaattaagaaaggatgggctggaattcaaggtattccgcgacaagtatggctaaaccttagtggtaaacaattacttcaatggcctattgaagaattagaaaccctaaggaagcaaaaggtccaattgaacaacaagaagttgagcaagggagaaatgtttgaagttaaagggatctcagcatcacaggctgatgttgaagtgctgttctcattttcaagtttgaacgaggccgaacaatttgatcctagatgggctgacctatatgcccaagacgtttgtgccattaagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaacttagaagaatacacacctgttttcttccgagtgttcaaggctcaaaaaagttataagattctcatgtgctcagatgctagaagatcttccatgagacaaaatgaagcaatgtacaagccctcatttgctggatatgtagatgtagatttagaagacatgaagaagttatctcttaggagtttgattgataactcagtagtggaaagtttcggtgctggtggcaaaacatgcataacatcaagggtgtatccaactttagcgatttatgataatgcacatttatttgtttttaacaatggctctgagacaatcacaattgagactctgaatgcttggagcatggatgcatgtaagatgaactaaatattttcaaaaaaattggaattatgtctacaattatatatgtctaaagagacaaaaattgtgttaaatttaacagtagatgatgttcacaaaaatcctctataattgtctctaatttattttggtgaatttagaaggcaaagtgtgtgtatggatttttctagtaccatatatatatatattaagtaagaaatttgttagcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="92671" stop="97134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92971" g_stop="93211" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93212" i_stop="94496" i_length="1285">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94497" g_stop="94505" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="250" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94506" i_stop="94582" i_length="77">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.654" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94583" g_stop="95604" g_length="1022"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="1272" r_length="1022" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95784" g_stop="96028" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1273" r_stop="1517" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="96029" i_stop="96218" i_length="190">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96219" g_stop="96318" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1518" r_stop="1617" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96319" i_stop="96449" i_length="131">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96450" g_stop="96834" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1618" r_stop="2002" r_length="385" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E744748" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2002</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E744748" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92971" e_stop="93211"/>
          <exon e_start="94497" e_stop="94505"/>
          <exon e_start="94583" e_stop="95604"/>
          <exon e_start="95784" e_stop="96028"/>
          <exon e_start="96219" e_stop="96318"/>
          <exon e_start="96450" e_stop="96834"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTCTTCAATATCTTTCTCCAAAATCACAAAAAAAAAAAATGGAATTATTTATGAAAAACTCTTCTCTTTGGGGTTTAAAATTTTATTTATTTTGCTTATTTATAATTTTATCAAACATTAATAGGGCATTTGCTTCTCATAATATTTTTTTGGACTTGCAATCTTCAAGTGCTATTAGTGTCAAGAATGTTCATAGAACTCGTTTTCATTTTCAACCTCCTAAACATTGGATTAATGGTATGTTCATTTTTTTTTTATTTTATATAACATGCGATAAATTTAACGTTAGCAATGTGGTTTGTTATTTAAATTCGAATTTGATTATATGACTTTGCTTATATAAATATACATAGTAATAAAAGTTTGTGTATAAATGCATGTCATATACATTTATTGACTTGGTATATATATCAGTACGATTAAATTAATTGATGGTGCAATTAATATTGCATTATTTAGGTGATAAAACTACAGAAATAAACGAAAATATTTTTTTATATATAGAGAAGTTCAAATGTTGATGTTTCTTTTATGGTTACATTGTTTTAAAATGTTTTTTTTTAACTATCTTTATAGCTACATATATATAAGATTGATCATTCTTTATATTTCAAAATTATATCTACATACACACATATACATCATTATGTGGTTCATTTATGTTAGTTTTCAGTATTCGATATTTATTTTTAAGTTTAATTTATTTAAATCTGCGTTAAAATATCTCACTTTTAAAGATAGAATCACTCCTGACCAACTATGAGTAACTCGATTCTCAAAATTTAAATTCGAAATTAGATTAATTATCATGGCAAGAGAACTACAACGTTTTGGATAAGAATGTGCAAAAGAGAGAAAGAAACATGAAATATATAAAAACCTAAGATTTTGGCCATGGAATTTAGGTGAAAATTAATTTGTTGAAGGCACCCTTTATTATTATTATTATAATTATTATTATTATTAATGAAATATAGTGACATTTCATACTCATATATTGTGTGCATTTAATTAATATATGTAGGTCTTATGTTAATTTAAACTTACCAAACATATTGTCTCTTATAAAGTTGACTCCCCCCCTCAACCCCCAACCCCCACCCCCACCCCCACCCCACCCAAAAAAATTACCTCATCAATTTCGTTTTTTATATGACACAATTTTCTTGTTTAATTTGTTATCTACAGAACGACTACTTTCTATATCATTCTACATAATATGTATATTTTTTATAATCACAATAAATCTCATGACACGTTTTCAGATCATAATTTTGCAAACACCTTTTTCTTTATTTTTTAATTAGGTATATCACATAAATTAAAAGGATTCATTAATTTTCGCAGAGAAAACTAATTAGTTTCTGTGTTTTTCACCTTTCATTTATTAATTACTACATAATTTTTAATCAATAATTGATGAAAGACTATGTAATGTATTCTATTATCTTCACTAATCATTTTTTTTTTGTATAATTCTTATATGGTCTCTCTCCATTGGATGCCTTTCAAATATACAAAGACCCTAATGGTAAGTTAGATTATTTTTCATTTAATTTTATCAATAACTCAATGATATTATTGATTTTCATTTTATTTTTCAAACAGCACCAATGTATTATAATGGAGTGTATCATTTATTCTATCAATACAATCCAAAAGGATCAGTATGGGGCAATATTATTTGGGCTCATTCAGTCTCAAAAGACTTGATAAATTGGATCCATTTAGAACCTGCAATTTATCCATCCAAAAAATTTGACAAGTATGGTACTTGGTCTGGATCATCAACTATTTTACCTAATAACAAACCTGTTATCATATACACCGGAGTAGTAGATTCGTATAATAATCAAGTCCAGAACTACGCCATCCCGGCTAACCTATCTGATCCATTTCTTCGTAAATGGATCAAACCTAACAACAACCCGTTGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGGGTTATTTGGGGTTGGTCAAATGAATCCGATGTATTACCTGACGATGAAATTAAGAAAGGATGGGCTGGAATTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCAACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATATCAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATTTCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAGGTTTGTTTCTTCAATCCAATTAATTGTAATGATCGAAGTTCACATCTTCTCCAAATTGAGTAAATCGAGAATTATAATGACCCGACTTTGATATCATGATAAGAAATGCATTTACTTATAGATCGCCCGTTAGTGTCATTAAAAAACTCTAACCTTGTTTAGGTTTTTTTTTTTTTTAATTAATGAGCAGATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTGGTAAGTTTTGCTTTCACAATTTTTATTTATTTATAATTTATTTGATCAAAACTTTCAAGATTCGATTAATTTGAAGAGTAACGATTTGTGTTTGACTAATCAATTTGTATCATATGCATATTTTTTTTTAGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGATGCATGTAAGATGAACTAAATATTTTCAAAAAAATTGGAATTATGTCTACAATTATATATGTCTAAAGAGACAAAAATTGTGTTAAATTTAACAGTAGATGATGTTCACAAAAATCCTCTATAATTGTCTCTAATTTATTTTGGTGAATTTAGAAGGCAAAGTGTGTGTATGGATTTTTCTAGTACCATATATATATATATTAAGTAAGAAATTTGTTAGCTTT</genome_strand>
        <mrna_strand>ATTATTCTTCAATATCTTTCTCCAAAATCACAAAAAAAAAAAATGGAATTATTTATGAAAAACTCTTCTCTTTGGGGTTTAAAATTTTATTTATTTTGCTTATTTATAATTTTATCAAACATTAATAGGGCATTTGCTTCTCATAATATTTTTTTGGACTTGCAATCTTCAAGTGCTATTAGTGTCAAGAATGTTCATAGAACTCGTTTTCATTTTCAACCTCCTAAACATTGGATTAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTAATG.............................................................................CACCAATGTATTATAATGGAGTGTATCATTTATTCTATCAATACAATCCAAAAGGATCAGTATGGGGCAATATTATTTGGGCTCATTCAGTCTCAAAAGACTTGATAAATTGGATCCATTTAGAACCTGCAATTTATCCATCCAAAAAATTTGACAAGTATGGTACTTGGTCTGGATCATCAACTATTTTACCTAATAACAAACCTGTTATCATATACACCGGAGTAGTAGATTCGTATAATAATCAAGTCCAGAACTACGCCATCCCGGCTAACCTATCTGATCCATTTCTTCGTAAATGGATCAAACCTAACAACAACCCGTTGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGGGTTATTTGGGGTTGGTCAAATGAATCCGATGTATTACCTGACGATGAAATTAAGAAAGGATGGGCTGGAATTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG...................................................................................................................................................................................GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG..............................................................................................................................................................................................ATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTG...................................................................................................................................ATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGATGCATGTAAGATGAACTAAATATTTTCAAAAAAATTGGAATTATGTCTACAATTATATATGTCTAAAGAGACAAAAATTGTGTTAAATTTAACAGTAGATGATGTTCACAAAAATCCTCTATAATTGTCTCTAATTTATTTTGGTGAATTTAGAAGGCAAAGTGTGTGTATGGATTTTTCTAGTACCATATATATATATATTAAGTAAGAAATTTGTTAGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E745216" ref_strand="+" ref_description="SGN-E745216 [GI|1771149]">
      <seq>ccttcacttgttttatcagtataacccaaaaggatcagtatggggcaatattatttgggctcattcagtctcaaaagacttgataaattggatccatttagaacctgcaatttatccatccaaaaaatttgacaagtatggtacttggtctggatcatcaactattttacctaataacaaacctgttatcatatacaccggagtagtagattcgtataataatcaagtccagaactacgccatcccggctaacctatctgatccatttcttcgtaaatggatcaaacctaacaacaacccgttgatcgtccctgataacagtatcaatagaactgagtttcgcgatccaactacagcttggatgggccaagatgggctttggaggattttaatagcaagtatgagaaaacatagagggatggcattgttgtatagaagtagagattttatgaaatggatcaaagcccaacatccacttcattcatctactaatactggaaattgggagtgtcctgattttttccctgtattatttaatagtaccaatggtttagatgtatcgtatcgcggaaaaaatgttaaatatgtcctcaagaatagtcttgatgttgctaggtttgattattacactattggcatgtatcacaccaaaatagataggtatattccgaataacaattcaattgatggttggaagggattgagaatcgactatggtaatttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="94308" stop="95629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94605" g_stop="95329" g_length="725"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="725" r_length="725" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E745216" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94605" e_stop="95329"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATCATTTATTCTATCAATACAATCCAAAAGGATCAGTATGGGGCAATATTATTTGGGCTCATTCAGTCTCAAAAGACTTGATAAATTGGATCCATTTAGAACCTGCAATTTATCCATCCAAAAAATTTGACAAGTATGGTACTTGGTCTGGATCATCAACTATTTTACCTAATAACAAACCTGTTATCATATACACCGGAGTAGTAGATTCGTATAATAATCAAGTCCAGAACTACGCCATCCCGGCTAACCTATCTGATCCATTTCTTCGTAAATGGATCAAACCTAACAACAACCCGTTGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCT</genome_strand>
        <mrna_strand>CCTTCACTTGTTTTATCAGTATAACCCAAAAGGATCAGTATGGGGCAATATTATTTGGGCTCATTCAGTCTCAAAAGACTTGATAAATTGGATCCATTTAGAACCTGCAATTTATCCATCCAAAAAATTTGACAAGTATGGTACTTGGTCTGGATCATCAACTATTTTACCTAATAACAAACCTGTTATCATATACACCGGAGTAGTAGATTCGTATAATAATCAAGTCCAGAACTACGCCATCCCGGCTAACCTATCTGATCCATTTCTTCGTAAATGGATCAAACCTAACAACAACCCGTTGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E240648" ref_strand="+" ref_description="SGN-E240648 [cLED-21-P10]">
      <seq>tgatcgtccctgataacagtatcaatagaactgagtttcgcgatccaactacagcttggatgggccaagatgggctttggaggattttaatagcaagtatgagaaaacatagagggatggcattgttgtatagaagtagagattttatgaaatggatcaaagcccaacatccacttcattcatctactaatactggaaattgggagtgtgctgattttttccctgtattatttaatagtaccaatggtttagatgtatcgtatcgcggaaaaaatgttaaatatgtcctcaagaatagtcttgatgttgctaggtttgattattacactattggcatgtatcacaccaaaatagataggtatattccgaataacaattcaattgatggttggaagggattgagaatcgactatggtaatttctatgcatcgaagacattctatgatcctagcagaaatcgaagggttattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="94607" stop="95677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94907" g_stop="95377" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="471" r_length="471" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E240648" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240648" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94907" e_stop="95377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGGGTTATTT</genome_strand>
        <mrna_strand>TGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTGCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGGGTTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E239600" ref_strand="+" ref_description="SGN-E239600 [cLED-23-L5]">
      <seq>tgatcgtccctgataacagtatcaatagaactgagtttcgcgatccaactacagcttggatgggccaagatgggctttggaggattttaatagcaagtatgagaaaacatagagggatggcattgttgtatagaagtagagattttatgaaatggatcaaagcccaacatccacttcattcatctactaatactggaaattgggagtgtcctgattttttccctgtattatttaatagtaccaatggtttagatgtatcgtatcgcggaaaaaatgttaaatatgtcctcaagaatagtcttgatgttgctaggtttgattattacactattggcatgtatcacaccaaaatagataggtatattccgaataacaattcaattgatggttggaagggattgagaatcgacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="94607" stop="95618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94907" g_stop="95318" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="412" r_length="412" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E239600" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94907" e_stop="95318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTA</genome_strand>
        <mrna_strand>TGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E240518" ref_strand="+" ref_description="SGN-E240518 [cLED-21-A13]">
      <seq>tagaactgagtttcgcgatccaactacagcttggatgggccaagatgggctttggaggattttaatagcaagtatgagaaaacatagagggatggcattgttgtatagaagtagagattttatgaaatggatcaaagcccaacatccacttcattcatctactaatactggaaattgggagtgtcctgattttttccctgtattatttaatagtaccaaatggtttagatgtatcgtatcgcggaaaaaatgttaaatatgtcctcaagaatagtcttgatgttgctaggcttgattattacactattggcatgtatcacaccaaaatagataggtatattccgaataacaattcaattgatggttggaagggattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="94632" stop="95607"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94932" g_stop="95307" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="377" r_length="377" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E240518" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>376</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94932" e_stop="95307"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACC-AATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTG</genome_strand>
        <mrna_strand>TAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGCTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E261244" ref_strand="+" ref_description="SGN-E261244 [cLEG-68-E1]">
      <seq>caacatccacttcattcatctactaatactggaaattgggagtgtcctgattttttccctgtattatttaatagtaccaatggtttagatgtatcgtatcgcggaaaaaatgttaaatatgtcctcaagaatagtcttgatgttgctaggtttgattattacactattggcatgtatcacaccaaaatagataggtatattccgaataacaattcaattgatggttggaagggattgagaatcgactatggtaatttctatgcatcgaagacattctatgatcctagcagaaatcgaagggttatttggggttggtcaaatgaatccgatgtattacctgacgatgaaattaagaaaggatgggctggaattcaaggtattccgcgacaagtatggctaaaccttagtggtaaacaattacttcaatggcctattgaagaattagaaaccctaaggaagcaaaaggtccaattgaacaacaagaagttgagcaagggagaaatgtttgaagttaaagggatctcagcatcacaggctgatgttgaagtgctgttctcattttcaagtttgaacgaggccgaacaatttgatcctagatgggctgacctatatgcccaagacgtttgtgcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="94771" stop="96180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95071" g_stop="95604" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="534" r_length="534" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95784" g_stop="95880" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="631" r_length="97" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E261244" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95071" e_stop="95604"/>
          <exon e_start="95784" e_stop="95880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGGGTTATTTGGGGTTGGTCAAATGAATCCGATGTATTACCTGACGATGAAATTAAGAAAGGATGGGCTGGAATTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCAACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATATCAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATTTCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCA</genome_strand>
        <mrna_strand>CAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGGGTTATTTGGGGTTGGTCAAATGAATCCGATGTATTACCTGACGATGAAATTAAGAAAGGATGGGCTGGAATTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG...................................................................................................................................................................................GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E235797" ref_strand="+" ref_description="SGN-E235797 [cLED-15-G4]">
      <seq>tagtcttgatgttgctaggtttgattattacactattggcatgtatcacaccaaaatagataggtatattccgaataacaattcaattgatggttggaagggattgagaatcgactatggtaatttctatgcatcgaagacattctatgatcctagcagaaatcgaagggttatttggggttggtcaaatgaatccgatgtattacctgacgatgaaattaagaaaggatgggctggaattcaaggtattccgcgacaagtatggctaaaccttagtggtaaacaattacttcaatggcctattgaagaattagaaaccctaaggaagcaaaaggtccaattgaacaacaagaagttgagcaagggagaaatgtttgaagttaaagggatctcagcatcacaggctgatgttgaagtgctgttctcattttcaagtttgaacgaggccgaacaatttgatcctagatgggctgacctatatgcccaagacgtttgtgccattaagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="94902" stop="96245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95202" g_stop="95604" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95784" g_stop="95945" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="565" r_length="162" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E235797" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235797" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95202" e_stop="95604"/>
          <exon e_start="95784" e_stop="95945"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGGGTTATTTGGGGTTGGTCAAATGAATCCGATGTATTACCTGACGATGAAATTAAGAAAGGATGGGCTGGAATTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCAACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATATCAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATTTCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAAC</genome_strand>
        <mrna_strand>TAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGGGTTATTTGGGGTTGGTCAAATGAATCCGATGTATTACCTGACGATGAAATTAAGAAAGGATGGGCTGGAATTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG...................................................................................................................................................................................GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E367950" ref_strand="+" ref_description="SGN-E367950 [TUS-22-H23]">
      <seq>ttcaaggtattccgcgacaagtatggctaaaccttagtggtaaacaattacttcaatggcctattgaagaattagaaaccctaaggaagcaaaaggtccaattgaacaacaagaagttgagcaagggagaaatgtttgaagttaaagggatctcagcatcacaggctgatgttgaagtgctgttctcattttcaagtttgaacgaggccgaacaatttgatcctagatgggctgacctatatgcccaagacgtttgtgccattaagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaacttagaagaatacacacctgttttcttccgagtgttcaaggctcaaaaaagttataagattctcatgtgctcagatgctagaagatcttccatgagacaaaatgaagcaatgtacaagccctcatttgctggatatgtagatgtagatttagaagacatgaagaagttatctcttaggagtttgattgataactcagtagtggaaagtttcggtgctggtggcaaaacatgcataacatcaagggtgtatccaactntagcgatttatgataatgcacatttatttgtttttaacaatggctctgagacaatcacaattgagactctgaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="95141" stop="96898"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95441" g_stop="95604" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95784" g_stop="96028" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="409" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96029" i_stop="96218" i_length="190">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96219" g_stop="96318" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="509" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96319" i_stop="96449" i_length="131">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96450" g_stop="96598" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="658" r_length="149" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E367950" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95441" e_stop="95604"/>
          <exon e_start="95784" e_stop="96028"/>
          <exon e_start="96219" e_stop="96318"/>
          <exon e_start="96450" e_stop="96598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCAACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATATCAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATTTCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAGGTTTGTTTCTTCAATCCAATTAATTGTAATGATCGAAGTTCACATCTTCTCCAAATTGAGTAAATCGAGAATTATAATGACCCGACTTTGATATCATGATAAGAAATGCATTTACTTATAGATCGCCCGTTAGTGTCATTAAAAAACTCTAACCTTGTTTAGGTTTTTTTTTTTTTTAATTAATGAGCAGATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTGGTAAGTTTTGCTTTCACAATTTTTATTTATTTATAATTTATTTGATCAAAACTTTCAAGATTCGATTAATTTGAAGAGTAACGATTTGTGTTTGACTAATCAATTTGTATCATATGCATATTTTTTTTTAGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGC</genome_strand>
        <mrna_strand>TTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG...................................................................................................................................................................................GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG..............................................................................................................................................................................................ATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTG...................................................................................................................................ATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTNTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E237654" ref_strand="+" ref_description="SGN-E237654 [cLED-19-C16]">
      <seq>ttcaaggtattccgcgacaagtatggctaaaccttagtggtaaacaattacttcaatggcctattgaagaattagaaaccctaaggaagcaaaaggtccaattgaacaacaagaagttgagcaagggagaaatgtttgaagttaaagggatctcagcatcacaggctgatgttgaagtgctgttctcattttcaagtttgaacgaggccgaacaatttgatcctagatgggctgacctatatgcccaagacgtttgtgccattaagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaacttagaagaatacacacctgttttcttccgagtgttcaaggctcaaaaaagttataagattctcatgtgctcagatgctagaagatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="95141" stop="96330"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95441" g_stop="95604" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95784" g_stop="96028" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="409" r_length="245" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E237654" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E237654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95441" e_stop="95604"/>
          <exon e_start="95784" e_stop="96028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCAACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATATCAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATTTCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG</genome_strand>
        <mrna_strand>TTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG...................................................................................................................................................................................GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E232957" ref_strand="+" ref_description="SGN-E232957 [cLED-6-C2]">
      <seq>gacaagtatggctaaaccttagtggtaaacaattacttcaatggcctattgaagaattagaaaccctaaggaagcaaaaggtccaattgaacaacaagaagttgagcaagggagaaatgtttgaagttaaagggatctcagcatcacaggctgatgttgaagtgctgttctcattttcaagtttgaacgaggccgaacaatttgatcctagatgggctgacctatatgcccaagacgtttgtgccattaagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaacttagaagaatacacacctgttttcttccgagtgttcaaggctcaaaaaagttataagattctcatgtgctcagatgctagaagatcttccatgagacaaaatgaagcaatgtacaagccctcatttgctggatatgtagatgtagatttagaagacatgaagaagttatctcttaggagtttgattgataactcagtagtggaaagtttcggtgctggtggcaaaacatgcataacatcaagggtgtatccaactttagcgatttatgataatgcacatttatttgtttttaacaatggctctgagacaatcacaattgagactctgaatgcttggagcatggatgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="95156" stop="96914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95456" g_stop="95604" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95784" g_stop="96028" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="394" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96029" i_stop="96218" i_length="190">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96219" g_stop="96318" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="494" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96319" i_stop="96449" i_length="131">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96450" g_stop="96611" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="656" r_length="162" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E232957" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232957" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95456" e_stop="95604"/>
          <exon e_start="95784" e_stop="96028"/>
          <exon e_start="96219" e_stop="96318"/>
          <exon e_start="96450" e_stop="96611"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCAACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATATCAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATTTCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAGGTTTGTTTCTTCAATCCAATTAATTGTAATGATCGAAGTTCACATCTTCTCCAAATTGAGTAAATCGAGAATTATAATGACCCGACTTTGATATCATGATAAGAAATGCATTTACTTATAGATCGCCCGTTAGTGTCATTAAAAAACTCTAACCTTGTTTAGGTTTTTTTTTTTTTTAATTAATGAGCAGATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTGGTAAGTTTTGCTTTCACAATTTTTATTTATTTATAATTTATTTGATCAAAACTTTCAAGATTCGATTAATTTGAAGAGTAACGATTTGTGTTTGACTAATCAATTTGTATCATATGCATATTTTTTTTTAGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGAT</genome_strand>
        <mrna_strand>GACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG...................................................................................................................................................................................GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG..............................................................................................................................................................................................ATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTG...................................................................................................................................ATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E240137" ref_strand="+" ref_description="SGN-E240137 [cLED-32-H10]">
      <seq>gacaagtatggctaaaccttagtggtaaacaattacttcaatggcctattgaagaattagaaaccctaaggaagcaaaaggtccaattgaacaacaagaagttgagcaagggagaaatgtttgaagttaaagggatctcagcatcacaggctgatgttgaagtgctgttctcattttcaagtttgaacgaggccgaacaatttgatcctagatgggctgacctatatgcccaagacgtttgtgccattaagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaacttagaagaatacacacctgttttcttccgagtgttcaaggctcaaaaaagttataagattctcatgtgctcagatgctagaagatcttccatgagacaaaatgaagcaatgtacaagccctcatttgctggatatgtagatgtagatttagaagacatgaagaagttatctcttaggagtttgattgataactcagtagtggaaagtttcggtgctggtggcaaaacatgcataacatcaagggtgtatccaactttagcgatttatgataatgcacatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="95156" stop="96846"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95456" g_stop="95604" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95784" g_stop="96028" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="394" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96029" i_stop="96218" i_length="190">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96219" g_stop="96318" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="494" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96319" i_stop="96449" i_length="131">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96450" g_stop="96546" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="591" r_length="97" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E240137" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240137" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95456" e_stop="95604"/>
          <exon e_start="95784" e_stop="96028"/>
          <exon e_start="96219" e_stop="96318"/>
          <exon e_start="96450" e_stop="96546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCAACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATATCAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATTTCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAGGTTTGTTTCTTCAATCCAATTAATTGTAATGATCGAAGTTCACATCTTCTCCAAATTGAGTAAATCGAGAATTATAATGACCCGACTTTGATATCATGATAAGAAATGCATTTACTTATAGATCGCCCGTTAGTGTCATTAAAAAACTCTAACCTTGTTTAGGTTTTTTTTTTTTTTAATTAATGAGCAGATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTGGTAAGTTTTGCTTTCACAATTTTTATTTATTTATAATTTATTTGATCAAAACTTTCAAGATTCGATTAATTTGAAGAGTAACGATTTGTGTTTGACTAATCAATTTGTATCATATGCATATTTTTTTTTAGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATT</genome_strand>
        <mrna_strand>GACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG...................................................................................................................................................................................GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG..............................................................................................................................................................................................ATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTG...................................................................................................................................ATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E232887" ref_strand="+" ref_description="SGN-E232887 [cLED-8-O10]">
      <seq>gacaagtatggctaaaccttagtggtaaacaattacttcaatggcctattgaagaattagaaaccctaaggaagcaaaaggtccaattgaacaacatgaagttgagcaagggagaaatgtttgaagttaaagggatctcagcatcacaggctgatgttgaagtgctgttctcattttcaagtttgaacgaggccgaacaatttgatcctagatgggctgacctatatgcccaagacgtttgtgccattaagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaacttagaagaatacacacctgttttcttccgagtgttcaaggctcaaaaaagttataagattctcatgtgctcagatgctagaagatcttccatgagacaaaatgaagcaatgtacaagccctcatttgctggatatgtagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="95156" stop="96576"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95456" g_stop="95604" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95784" g_stop="96028" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="394" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96029" i_stop="96218" i_length="190">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96219" g_stop="96276" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="452" r_length="58" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E232887" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232887" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95456" e_stop="95604"/>
          <exon e_start="95784" e_stop="96028"/>
          <exon e_start="96219" e_stop="96276"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCAACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATATCAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATTTCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAGGTTTGTTTCTTCAATCCAATTAATTGTAATGATCGAAGTTCACATCTTCTCCAAATTGAGTAAATCGAGAATTATAATGACCCGACTTTGATATCATGATAAGAAATGCATTTACTTATAGATCGCCCGTTAGTGTCATTAAAAAACTCTAACCTTGTTTAGGTTTTTTTTTTTTTTAATTAATGAGCAGATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGAT</genome_strand>
        <mrna_strand>GACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACATGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG...................................................................................................................................................................................GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG..............................................................................................................................................................................................ATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E323892" ref_strand="+" ref_description="SGN-E323892 [cTOC-3-A17]">
      <seq>aaaccctaaggaagcaaaaggtccaattgaacaacaagaagttgagcaagggagaaatgtttgaagttaaagggatctcagcatcacaggctgatgttgaagtgctgttctcattttcaagtttgaacgaggccgaacaatttgatcctagatgggctgacctatatgcccaagacgtttgtgccattaagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaacttagaagaatacacacctgttttcttccgagtgttcaaggctcaaaaaagttataagattctcatgtgctcagatgctagaagatcttccatgagacaaaatgaagcaatgtacaagccctcatttgctggatatgtagatgtagatttagaagacatgaagaagttatctcttacgagtttgattgataactcagtagtggaaagtttcggtgctggtggcaaaacatgcataacatcaagggtgtatccaactttagcgatttatgataatgcacatttatttgtttttaacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="95216" stop="96863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95516" g_stop="95604" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95784" g_stop="96028" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="334" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96029" i_stop="96218" i_length="190">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96219" g_stop="96318" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="434" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96319" i_stop="96449" i_length="131">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96450" g_stop="96563" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="548" r_length="114" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E323892" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E323892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95516" e_stop="95604"/>
          <exon e_start="95784" e_stop="96028"/>
          <exon e_start="96219" e_stop="96318"/>
          <exon e_start="96450" e_stop="96563"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCAACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATATCAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATTTCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAGGTTTGTTTCTTCAATCCAATTAATTGTAATGATCGAAGTTCACATCTTCTCCAAATTGAGTAAATCGAGAATTATAATGACCCGACTTTGATATCATGATAAGAAATGCATTTACTTATAGATCGCCCGTTAGTGTCATTAAAAAACTCTAACCTTGTTTAGGTTTTTTTTTTTTTTAATTAATGAGCAGATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTGGTAAGTTTTGCTTTCACAATTTTTATTTATTTATAATTTATTTGATCAAAACTTTCAAGATTCGATTAATTTGAAGAGTAACGATTTGTGTTTGACTAATCAATTTGTATCATATGCATATTTTTTTTTAGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAAT</genome_strand>
        <mrna_strand>AAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG...................................................................................................................................................................................GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG..............................................................................................................................................................................................ATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTACGAGTTTG...................................................................................................................................ATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E228259" ref_strand="+" ref_description="SGN-E228259 [cLED-2-D2]">
      <seq>aaccctaaggaagcaaaaggtccaattgaacaacaagaagttgagcaagggagaaatgtttgaagttaaagggatctcagcatcacaggctgatgttgaagtgctgttctcattttcaagtttgaacgaggccgaacaatttgatcctagatgggctgacctatatgcccaagacgtttgtgccattaagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaacttagaagaatacacacctgttttcttccgagtgttcaaggctcaaaaaagttataagattctcatgtgctcagatgctagaagatcttccatgagacaaaatgaagcaatgtacaagccctcatttgctggatatgtagatgtagatttagaagacatgaagaagttatctcttaggagtttgattgataactcagtagtggaaagtttcggtgctggtggcaaaacatgcataacatcaagggtgtatccaactttagcgatttatgataatgcacatttatttgttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="95217" stop="96857"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95517" g_stop="95604" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95784" g_stop="96028" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="333" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96029" i_stop="96218" i_length="190">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96219" g_stop="96318" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="433" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96319" i_stop="96449" i_length="131">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96450" g_stop="96557" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="541" r_length="108" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E228259" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228259" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95517" e_stop="95604"/>
          <exon e_start="95784" e_stop="96028"/>
          <exon e_start="96219" e_stop="96318"/>
          <exon e_start="96450" e_stop="96557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCAACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATATCAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATTTCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAGGTTTGTTTCTTCAATCCAATTAATTGTAATGATCGAAGTTCACATCTTCTCCAAATTGAGTAAATCGAGAATTATAATGACCCGACTTTGATATCATGATAAGAAATGCATTTACTTATAGATCGCCCGTTAGTGTCATTAAAAAACTCTAACCTTGTTTAGGTTTTTTTTTTTTTTAATTAATGAGCAGATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTGGTAAGTTTTGCTTTCACAATTTTTATTTATTTATAATTTATTTGATCAAAACTTTCAAGATTCGATTAATTTGAAGAGTAACGATTTGTGTTTGACTAATCAATTTGTATCATATGCATATTTTTTTTTAGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTT</genome_strand>
        <mrna_strand>AACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG...................................................................................................................................................................................GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG..............................................................................................................................................................................................ATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTG...................................................................................................................................ATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E231264" ref_strand="+" ref_description="SGN-E231264 [cLED-5-P21]">
      <seq>tgacctatatgcccaagacgtttgtgccattaagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaacttagaagaatacacacctgttttcttccgagtgttcaaggctcaaaaaagttataagattctcatgtgctcagatgctagaagatcttccatgagacaaaatgaagcaatgtacaagccctcatttgctggatatgtagatgtagatttagaagacatgaagaagttatctcttaggagtttgattgataactcagtagtggaaagtttcggtgctggtggcaaaacatgcataacatcaagggtgtatccaactttagcgatttatgataatgcacatttatttgtttttaacaatggctctgagacaatcacaattgagactctgaatgcttggagcatggatgcatgtaagatgaactaaatattttcaaaaaaattggaattatgtctacaattatatatgtctaaagagacaaaaattgtgttaaatttaacagtagatgatgttcacaaaaatcctctataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="95552" stop="97035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95852" g_stop="96028" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96029" i_stop="96218" i_length="190">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96219" g_stop="96318" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="277" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96319" i_stop="96449" i_length="131">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96450" g_stop="96735" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="563" r_length="286" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E231264" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231264" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95852" e_stop="96028"/>
          <exon e_start="96219" e_stop="96318"/>
          <exon e_start="96450" e_stop="96735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAGGTTTGTTTCTTCAATCCAATTAATTGTAATGATCGAAGTTCACATCTTCTCCAAATTGAGTAAATCGAGAATTATAATGACCCGACTTTGATATCATGATAAGAAATGCATTTACTTATAGATCGCCCGTTAGTGTCATTAAAAAACTCTAACCTTGTTTAGGTTTTTTTTTTTTTTAATTAATGAGCAGATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTGGTAAGTTTTGCTTTCACAATTTTTATTTATTTATAATTTATTTGATCAAAACTTTCAAGATTCGATTAATTTGAAGAGTAACGATTTGTGTTTGACTAATCAATTTGTATCATATGCATATTTTTTTTTAGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGATGCATGTAAGATGAACTAAATATTTTCAAAAAAATTGGAATTATGTCTACAATTATATATGTCTAAAGAGACAAAAATTGTGTTAAATTTAACAGTAGATGATGTTCACAAAAATCCTCTATAAT</genome_strand>
        <mrna_strand>TGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG..............................................................................................................................................................................................ATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTG...................................................................................................................................ATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGATGCATGTAAGATGAACTAAATATTTTCAAAAAAATTGGAATTATGTCTACAATTATATATGTCTAAAGAGACAAAAATTGTGTTAAATTTAACAGTAGATGATGTTCACAAAAATCCTCTATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E553013" ref_strand="+" ref_description="SGN-E553013 [cTSB-5-L9]">
      <seq>aagggttcgactatccaaggtgggcttggaccatttgggcttgtgacattagcttctaaaaacttagaagaatacacacctggttttcttccgagtgttcaaggctcaaaaaagttataagattctcatgtgctcagatgctagaagatcttccatgagacaaaatgaagcaatgtacaagccctcatttgctggatatgtagatgtagatttagaagacatgaagaagttatctcttaggagtttgattgataactcagtagtggaaagtttcggtgctggtggcaaaacatgcataacatcaagggtgtatccaactttagcgatttatgataatgcacatttatttgtttttaacaatggctctgagacaatcacaattgagactctgaatgcttggagcatggatgcatgtaagatgaactaaatattttcaaaaaaattggaattatgtctacnaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="95583" stop="96969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95883" g_stop="96028" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96029" i_stop="96218" i_length="190">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96219" g_stop="96318" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="247" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96319" i_stop="96449" i_length="131">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96450" g_stop="96661" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="459" r_length="212" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="460" polyA_stop="484"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E553013" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E553013" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95883" e_stop="96028"/>
          <exon e_start="96219" e_stop="96318"/>
          <exon e_start="96450" e_stop="96661"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCT-GTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAGGTTTGTTTCTTCAATCCAATTAATTGTAATGATCGAAGTTCACATCTTCTCCAAATTGAGTAAATCGAGAATTATAATGACCCGACTTTGATATCATGATAAGAAATGCATTTACTTATAGATCGCCCGTTAGTGTCATTAAAAAACTCTAACCTTGTTTAGGTTTTTTTTTTTTTTAATTAATGAGCAGATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTGGTAAGTTTTGCTTTCACAATTTTTATTTATTTATAATTTATTTGATCAAAACTTTCAAGATTCGATTAATTTGAAGAGTAACGATTTGTGTTTGACTAATCAATTTGTATCATATGCATATTTTTTTTTAGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGATGCATGTAAGATGAACTAAATATTTTCAAAAAAATTGGAATTATGTCTACA</genome_strand>
        <mrna_strand>AAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG..............................................................................................................................................................................................ATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTG...................................................................................................................................ATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGATGCATGTAAGATGAACTAAATATTTTCAAAAAAATTGGAATTATGTCTACN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E367949" ref_strand="-" ref_description="SGN-E367949 [TUS-22-H23]">
      <seq>aatgtacaagccctcatttgctggatatgtagatgtagatttagaagacatgaaaaagttatctcttaggagtttgattgataactcagtagtggaaagtttcggtgctggtggcaaaacatgcataacatcaagggtgtatccaactttagcgatttatgataatgcacatttatttgtttttaacaatggcttttagacaatcacaattgagactctgaatgcttggagcatggatgcatgtaaaatgaactaaatattttcaaaaaaattggaattatgtctacaattatatatgtttaaaaaaacaaaaattgtgttaaatttaacagtaaatgatgttcacaaaaatcctctataattgtctctaatttattttggtgaatttagaaggcaaagtgtgtgtatggatttttctagtaccatatatatatatattaagtaagaaatttgttagctttcctttttgttttgtaacataatcaaatgtgtggttttatgtagaactaatatttggtaatattaggcaagttgttatgtgacttattttattcaaaaatataataaaaagttcaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="95943" stop="97271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96243" g_stop="96318" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96319" i_stop="96449" i_length="131">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96450" g_stop="96957" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="584" r_length="508" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="585" polyA_stop="601"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E367949" ref_strand="-">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367949" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="96243" e_stop="96318"/>
          <exon e_start="96450" e_stop="96957"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTGGTAAGTTTTGCTTTCACAATTTTTATTTATTTATAATTTATTTGATCAAAACTTTCAAGATTCGATTAATTTGAAGAGTAACGATTTGTGTTTGACTAATCAATTTGTATCATATGCATATTTTTTTTTAGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGATGCATGTAAGATGAACTAAATATTTTCAAAAAAATTGGAATTATGTCTACAATTATATATGTCTAAAGAGACAAAAATTGTGTTAAATTTAACAGTAGATGATGTTCACAAAAATCCTCTATAATTGTCTCTAATTTATTTTGGTGAATTTAGAAGGCAAAGTGTGTGTATGGATTTTTCTAGTACCATATATATATATATTAAGTAAGAAATTTGTTAGCTTTCCTTTTTGTTTTGTAACATAATCAAATGTGTGGTCTTATGTAGAACTAATATTTGGTAATATTAGGCAAGTTGTTATGTGACTTATTTTATTCAAAAATATAATAAGAAGTTCAAAGAGAAGA</genome_strand>
        <mrna_strand>AATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAAAAGTTATCTCTTAGGAGTTTG...................................................................................................................................ATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTTTTAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGATGCATGTAAAATGAACTAAATATTTTCAAAAAAATTGGAATTATGTCTACAATTATATATGTTTAAAAAAACAAAAATTGTGTTAAATTTAACAGTAAATGATGTTCACAAAAATCCTCTATAATTGTCTCTAATTTATTTTGGTGAATTTAGAAGGCAAAGTGTGTGTATGGATTTTTCTAGTACCATATATATATATATTAAGTAAGAAATTTGTTAGCTTTCCTTTTTGTTTTGTAACATAATCAAATGTGTGGTTTTATGTAGAACTAATATTTGGTAATATTAGGCAAGTTGTTATGTGACTTATTTTATTCAAAAATATAATAAAAAGTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E546911" ref_strand="+" ref_description="SGN-E546911 [TUS-70-I8]">
      <seq>cttatcccaaaaaaaaaaattaaaaaaaattatttagattaaataccactatctgtcaaagcccaattattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtctatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattcagtttcaaaagacttaatcaactggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacatggtctggatcagcaacaatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacatatccgatccatatctccgcgaatggatcaagccagacaacaacccactaattatagccgatgaaagtatcaacaagacgaaattccgtgacccaacaacagcatggatgggtaaagatggacattggagaattgttnattggaagtttgagggaacacagcaggggtttagctataatgtacaggagtaaagactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97757" stop="99654"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98057" g_stop="98344" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="296" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99414" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="769" r_length="473" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E546911" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E546911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98057" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99414"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTATCCAAAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCG-TCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTT</genome_strand>
        <mrna_strand>CTTATCC-CAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATACCACTATCTGTCAAAGCCCAATTATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTCTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCAGTTTCAAAAGACTTAATCAACTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACATGGTCTGGATCAGCAACAATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACATATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCACTAATTATAGCCGATGAAAGTATCAACAAGACGAAATTCCGTGACCCAACAACAGCATGGATGGGTAAAGATGGACATTGGAGAATTGTTNATTGGAAGTTTGAGGGAACACAGCAGGGGTTTAGCTATAATGTACAGGAGTAAAGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E334559" ref_strand="+" ref_description="SGN-E334559 [cTOD-23-P6]">
      <seq>ttatccaaaaaaaaaaaattaaaaaaaattatttagattaaatatcactatctgtcaaagcccaatcattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccanccaaaccccagtccaaaactacgcaatcccagctaacttatccgatccatatctccgcgaatggatcaagccagacaacaacccattaattatagccgatgaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97758" stop="99585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98058" g_stop="98344" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="295" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99285" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="638" r_length="343" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E334559" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98058" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCCAAAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAG</genome_strand>
        <mrna_strand>TTATCC-AAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCANCCAAACCCCAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E331604" ref_strand="+" ref_description="SGN-E331604 [cTOD-7-A21]">
      <seq>ttatccaaaaaaaaaaaaattaaaaaaaattatttagattaaatatcactatctgtcaaagcccaatcattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97758" stop="99513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98058" g_stop="98344" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="296" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99213" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="567" r_length="271" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E331604" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331604" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98058" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCCAAAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGC</genome_strand>
        <mrna_strand>TTATCCAAAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E334572" ref_strand="+" ref_description="SGN-E334572 [cTOD-23-E15]">
      <seq>ttatccaaaaaaaaaaaattaaaaaaaattatttagattaaatatcactatctgtcaaagcccaatcattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggntaacagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97758" stop="99501"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98058" g_stop="98344" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="295" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99201" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="554" r_length="259" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E334572" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98058" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCCAAAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTA</genome_strand>
        <mrna_strand>TTATCC-AAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGNTAACAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E747088" ref_strand="+" ref_description="SGN-E747088 [GI|20467112]">
      <seq>aaaaaaaaaaaattaaaaaaaattatttagattaaatatcactatctgtcaaagcccaatcattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacttatccgatccatatctccgcgaatggatcaagccagacaacaacccattaattatagccgatgaaagtatcaacaagaccaagtttcgtgacccaacaacagcatggatgggtaaagacgggcattggagaatcgtcatgggaagtttgaggaaacacagcaggggcttagctataatgtataggagcaaagactttatgaaatgggtcaaggctaaacacccacttcactcaactaacggcactggaaactgggaatgccctgatttttacccagtttcatcgaaaggtactgatgggttggatcaatacggtgaggaacacaagtacgtgctgaagaacagtatggatcttactcgatttgagtattatacacttggaaaatacgatacgaaaaaagataggtacgttccagatccagattctgtcgatagtttgaagggattgagactcgattacggtaacttctacgcatcgaagtcattctacgatccaagcaaaaatcgaagggttatctggggttggtctaatgaatcagatatattcccagaggatgataatgcgaagggatgggctgggattcaattgattcctcgtaaagtatggcttgatccaagtggtaagcagttggttcaatggcctgtggaggaactagaaaccctaagaactcaaaaggttcaattgagcaacaagaagatgaacaatggggagaagattgaagttacaggaatcacaccagcacaggctgatgttgaagtgacattctcatttgcaagtttggataaggcagagtcatttgatcctaaatggaatgatatgtatgcacaagatgtttgtggactcaagggtgcagatgttcaaggtgggcttgggccatttggtcttgctacattagctactgaaaacttggaagaaaacacaccggttttcttccgagttttcaaagcacagcaaaactacaaggttctcttgtgttctgacgctaaaaggtcaactcttaagttcaatgaaacaatgtacaaagcttcatttgctggatttgttgatgttgatttggctgacaagaaattgtcactcagaagcttgattgataattcagttatagaaacttttggtgctggtggaaagacatgtataacatcgagggtttatccaacattggcaattaacgacgaggcacatttattcgcgtttaacaacggaacggagccaatcacaattgagagtttggatgcatggagtatgggcaaagctaagatacaatattgaagaaaaaaaaaagaataaggagaaaggaactatggtaaaagggggaaatatgagattttgatggacatataagagtttgttattttgatatttcaactctattttttttgtttatcaaattagatatccctcgagtcaaaaaaaatgtatatagatttatcctctattttcaatttatgacaataatgctatgtttttgctttcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97765" stop="101895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98065" g_stop="98344" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="289" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99961" g_length="1019"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="1308" r_length="1019" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99962" i_stop="100689" i_length="728">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="100690" g_stop="100934" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1309" r_stop="1553" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="101033" g_stop="101129" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1554" r_stop="1650" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="101205" g_stop="101595" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1651" r_stop="2041" r_length="391" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E747088" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2041</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747088" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98065" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99961"/>
          <exon e_start="100690" e_stop="100934"/>
          <exon e_start="101033" e_stop="101129"/>
          <exon e_start="101205" e_stop="101595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAGGTATATATATAGACTTTTTTATTTTTAATTTATTATTATTATTATTATTACTCTCTCCGTTTTCAAAAAAAAAATATCCCTATTTTCTTTTATAGTCTCTTTAATTTAAAAAGAATGATCTATTTTCTTTTTGGATAACCTTTTAACTTTGATTTTTCACGTGAAATGTTTAAAATCACGAGATTAAAGAGCATTTTGGTTACATTTGACATAACTGAAATTTAGAAACACAAGATTAAAGGACATTTTGGTACATTTGACATAACTTGAATTTAAAACCACATAATTAAAGGGCATTTTGGTACATTTGAATTAGAACATTTTGATACATTTGACATAACATGAATTTAGAACCACAAGATTAAAAAATCTTCTTTCTTTTTTCTTAAATTTCGTTCCAAGTCAAATTAGGTCATTCTTTTTTAATTACTCCCTCCGTCTAATTTTATGTAACAACATTTGACCGGACGGAGAGTTTTAAGAAATAAATAAAACACTTTGAGATGTGTACCAAATTGCTCTCCAAAAATACTCACTTTTCTCTCTCCTCATAAATGTATTTGAGTACTATTTTTAAAATTAAGCGAGTCCAACAAGAATAAAATAGAAACTGTACTTTTAAATATTTACCATATAAAAAAATGTGATTTTTTTTTTTTGAAAACTGATCAAAAAGAAAATGATATCACTCGACGATGAAAGTGTTTAATAATGAAAAAACATGACAGGCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGTTGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCAAAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGAATAAGGAGAAAGGAACTATGGTAAAAGGGGGAAATATGAGATTTTGATGGACATATAAGAGTTTGTTATTTTGATATTTCAACTCTATTTTTTTTGTTTATCAAATTAGATATCCCTCGAGTCAAAAAAAATGTATATAGATTTATCCTCTATTTTCAATTTATGACAATAATGCTATGTTTTTGCTTTCAAAA</genome_strand>
        <mrna_strand>AAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAG..................................................................................................GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG...........................................................................ATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGAATAAGGAGAAAGGAACTATGGTAAAAGGGGGAAATATGAGATTTTGATGGACATATAAGAGTTTGTTATTTTGATATTTCAACTCTATTTTTTTTGTTTATCAAATTAGATATCCCTCGAGTCAAAAAAAATGTATATAGATTTATCCTCTATTTTCAATTTATGACAATAATGCTATGTTTTTGCTTTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E332525" ref_strand="+" ref_description="SGN-E332525 [cTOD-18-C5]">
      <seq>aaaaaaattaaaaaaaattatttagattaaatatcactatctgtcaaagcccaatcattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacttatccgatccatatctccgcgaatggatcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97770" stop="99550"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98070" g_stop="98344" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="284" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99250" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="592" r_length="308" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E332525" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332525" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98070" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAG</genome_strand>
        <mrna_strand>AAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E329652" ref_strand="+" ref_description="SGN-E329652 [cTOD-3-B17]">
      <seq>aaaaattaaaaaaaattatttagattaaatatcactatctgtcaaagcccaatcattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97772" stop="99420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98072" g_stop="98344" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="282" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99120" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="460" r_length="178" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E329652" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98072" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATC</genome_strand>
        <mrna_strand>AAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E331382" ref_strand="+" ref_description="SGN-E331382 [cTOD-9-K10]">
      <seq>aaaattaaaaaaaattatttagattaaatatcactatctgtcaaagcccaatcattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97773" stop="99387"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98073" g_stop="98344" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="281" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99087" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="426" r_length="145" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E331382" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98073" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAA</genome_strand>
        <mrna_strand>AAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E334424" ref_strand="+" ref_description="SGN-E334424 [cTOD-23-C5]">
      <seq>attaaaaaaaattatttagattaaatatcactatctgtcaaagcccaatcattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacttatccgatccatatctccgcgaatggatcaagccagacaacnacccattaattatagccgatgaaagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97776" stop="99588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98076" g_stop="98344" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="278" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99288" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="624" r_length="346" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E334424" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98076" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99288"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTAT</genome_strand>
        <mrna_strand>ATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACNACCCATTAATTATAGCCGATGAAAGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E334092" ref_strand="+" ref_description="SGN-E334092 [cTOD-21-A21]">
      <seq>aattatttagattaaatatcactatctgtcaaagcccaatcattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacttatccgatccatatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97785" stop="99535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98085" g_stop="98344" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="269" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99235" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="562" r_length="293" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E334092" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334092" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98085" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTC</genome_strand>
        <mrna_strand>AATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E333482" ref_strand="+" ref_description="SGN-E333482 [cTOD-20-D15]">
      <seq>ttaaatatcactatctgtcaaagcccaatcattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacttatccgatccatatctccgcgaatggatcaagccagacaacaacccattaattatagccgatgaaagtatcaacaagaccaagtttcgtgaaccaacaacagcatggatgggtaaagacgggcattggagaatcgtcatgggaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97796" stop="99665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98096" g_stop="98344" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="258" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99365" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="681" r_length="423" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E333482" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98096" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTT</genome_strand>
        <mrna_strand>TTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGAACCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E547397" ref_strand="+" ref_description="SGN-E547397 [TUS-71-E3]">
      <seq>caaagcccaattattaaaataaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatggatgtctcttgatcaaaacatacaatagatcccaatgcaccaatgttatttcaatggagtctatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattcagtttcaaaagacttaatcaactggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacatggtctggatcagcaacaatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacatatccgatccatatctccgcgaatggatcaagccagacaacaacccactaattatagccgatgaaagtatcaacaagacgaaattccgtgacccaacaacagcatggatgggtaaagatggacattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97814" stop="99646"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98114" g_stop="98344" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98572" i_length="228">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98573" g_stop="98609" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="268" r_length="37" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99346" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="673" r_length="405" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E547397" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E547397" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98114" e_stop="98344"/>
          <exon e_start="98573" e_stop="98609"/>
          <exon e_start="98943" e_stop="99346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATG-TATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGG</genome_strand>
        <mrna_strand>CAAAGCCCAATTATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG....................................................................................................................................................................................................................................GATGTCTCTTGATCAAAACATACAATAGATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTTATTTCAATGGAGTCTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCAGTTTCAAAAGACTTAATCAACTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACATGGTCTGGATCAGCAACAATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACATATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCACTAATTATAGCCGATGAAAGTATCAACAAGACGAAATTCCGTGACCCAACAACAGCATGGATGGGTAAAGATGGACATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E330542" ref_strand="+" ref_description="SGN-E330542 [cTOD-8-A2]">
      <seq>taaaataaaaattatggattattcatctaataaaagttctcgttgggctttgccagttatcttagtttgcttttttgtaattttattatccaataatgttgtttttgcttctcataaagtttttattcacttgcaatctcaaaatgctgtaaatgttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacttatccgatccatatctccgcgaatggatcaagccagacaacaacccattaattatagccgatgaaagtatcaacaagaccaagtttcgtgacccaacaacagcatggatgggtaaagacgggcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97833" stop="99645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98133" g_stop="98344" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="212" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="221" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99345" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="624" r_length="403" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E330542" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E330542" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98133" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTG</genome_strand>
        <mrna_strand>TAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E334064" ref_strand="+" ref_description="SGN-E334064 [cTOD-24-H11]">
      <seq>ttcatactgttcatcgaactggttatcattttcagcccgaaaaacattggatcaatgatcccaatgcaccaatgtatttcaatggagtgtatcatctattctaccagtacaacccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacttatccgatccatatctccgcgaatggatcaagccagacaacaacccattaattatagccgatgaaagtatcaacaagaccaagtttcgtgacccaacaacagcatggatgggtaaagacgggcattggagaatcgtcatgggaagtttgaggaaacacagcaggggcttagctataatgtataggagcaaagactttatgaaatgggtcaaggctaaacacccacttcactcaactaacggcactggaaactggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="97988" stop="99774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98288" g_stop="98344" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98601" g_stop="98609" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="66" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98943" g_stop="99474" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="598" r_length="532" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E334064" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98288" e_stop="98344"/>
          <exon e_start="98601" e_stop="98609"/>
          <exon e_start="98943" e_stop="99474"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATTCCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATTTTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTTTTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATACAATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAAAAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGTCAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGTTTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACTAATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGA</genome_strand>
        <mrna_strand>TTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG................................................................................................................................................................................................................................................................ATCCCAATG.............................................................................................................................................................................................................................................................................................................................................CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E744861" ref_strand="+" ref_description="SGN-E744861 [GI|1771153]">
      <seq>ccttcacctgttttatcagtataatccaaatggttcagtatggggtaacattgtttgggctcattccgtttcaaaagacttgatcaattggatcaatttagaacctgcaatttacccatcaaagccatttgatcaattcggtacctggtctggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacttatccgatccatatctccgcgaatggatcaagccagacaacaacccattaattatagccgatgaaagtatcaacaagaccaagtttcgtgacccaacaacagcatggatgggtaaagacgggcattggagaatcgtcatgggaagtttgaggaaacacagcaggggcttagctataatgtataggagcaaagactttatgaaatgggtcaaggctaaacacccacttcactcaactaacggcactggaaactgggaatgccctgatttttacccagtttcatcgaaaggtactgatgggttggatcaatacggtgaggaacacaagtacgtgctgaagaacagtatggatcttactcgatttgagtattatacacttggaaaatacgatacgaaaaaagataggtacgttccagatccagattctgtcgatagtttgaagggattgagactcgattacggtaacttctacgcatcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="98668" stop="99996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98965" g_stop="99697" g_length="733"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="733" r_length="733" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E744861" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E744861" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98965" e_stop="99697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAG</genome_strand>
        <mrna_strand>CCTTCACCTGTTTTATCAGTATAATCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E332502" ref_strand="+" ref_description="SGN-E332502 [cTOD-17-L8]">
      <seq>tggatcagcaaccatcctacctggtaacaagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacttatccgatccatatctccgcgaatggatcaagccagacaacaacccattaattatagccgatgaaagtatcaacaagaccaagtttcgtgacccaacaacagcatggatgggtaaagacgggcattggagaatcgtcatgggaagtttgaggaaacacagcaggggcttagctataatgtataggagcaaagactttatgaaatgggtcaaggctaaacacccacttcactcaactaacggcactggaaactgggaatgccctgatttttacccagtttcatcgaaaggtactgatgggttggatcaatacggtgaggaacacaagtacgtgctgaagaacagtatggatcttactcgatttgagtattatacacttggaaaatacgatacgaaaaaagataggtacgttccagatccagattctgtcgatagtttgaagggattgagactcgattacggtaacttctacgcatcgaagtcattctacgatccaagcaaaaatcgaagggttatctggggttggtctaatgaatcagatatattcccagaggatgataatgcgaagggatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="98815" stop="100093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99115" g_stop="99793" g_length="679"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E332502" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99115" e_stop="99793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCT</genome_strand>
        <mrna_strand>TGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E334020" ref_strand="+" ref_description="SGN-E334020 [cTOD-24-C12]">
      <seq>aagccagtcatcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacgcaatcccagctaacttatccgatccatatctccgcgaatggatcaagccagacaacaacccattaattatagccgatgaaagtatcaacaagaccaagtttcgtgacccaacaacagcatggatgggtaaagacgggcattggagaatcgtcatgggaagtttgaggaaacacagcaggggcttagctataatgtataggagcaaagactttatgaaatgggtcaaggctaaacacccacttcactcaactaacggcactggaaactgggaatgccctgatttttacccagtttcatcgaaaggtactgatgggttggatcaatacggtgaggaacacaagtacgtgctgaagaacagtatggatcttactcgatttgagtattatacacttggaaaatacgatacgaaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="98843" stop="99917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99143" g_stop="99617" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="475" r_length="475" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E334020" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334020" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99143" e_stop="99617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAG</genome_strand>
        <mrna_strand>AAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E331134" ref_strand="+" ref_description="SGN-E331134 [cTOD-6-N3]">
      <seq>atcttgtacaccggaatcatagatgccaaccaaacccaagtccaaaactacacaatcccatctaacttatccgatccatatctccgcgaatggatcaagccatacaacaacccattaattatagccgatgaaagtatcaacaagaccaagtttcgtgacccaacaacagcatggatgggtaaagacgggcattggagaatcgttatgggaagtttgaggaaacacagcaggggcttagctataatgtataggagcaaagactttatgaaatgggtcaaggctaaacacccacttcactcaactaacggcactggaaactgggaatgccctgatttttacccaatttcattgaaaggtactgatgggttggatcaataccgtgaggaacacaagtacgtgctgaagaacagtatggatcttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="98852" stop="99874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99152" g_stop="99574" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="423" r_length="423" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E331134" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331134" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99152" e_stop="99574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACT</genome_strand>
        <mrna_strand>ATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACACAATCCCATCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCATACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTTATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAATTTCATTGAAAGGTACTGATGGGTTGGATCAATACCGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E373644" ref_strand="+" ref_description="SGN-E373644 [TUS-33-M18]">
      <seq>gattttttcccagtttcattgaaaggtactaatgggttggatcaatacggtgaagaatacaagtatgtgcttaagaacagtatggatcttactcgatttgagtattatacacttggaaaatacgatacaaaaaaagataggtacgttccagatccagattctgttgatagttggaagggattgagactcgattatggtaacttctacgcatcaaagtcattctatgatccaagcaaaaatcgaagggttatttggagttggtctaatgaatcagatatttttccagaggatgataatgcgaagggatgggctgggattcaattgattcctcgtaaagtatggcttgatccaagtggtaagcagttggttcaatggcctgttgaagaattagaaaccctaagaactcaaaaggttcaattgagcaacaagaagatgaacaatggtgaaaagattgaagtgacaggaatcacaccagcacaggctgatgttgaagtgacattctcatttgcaagtttggataaggcagagtcatttgatcctaaatggaatgatatgtatgcacaagatgtttgtggactcaagggtgcagatgttcaaggtgggcttgggccatttggtcttgctacattagccaccgaaaacttggaagaaaacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="99182" stop="101165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99482" g_stop="99961" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="480" r_length="480" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99962" i_stop="100689" i_length="728">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100690" g_stop="100865" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="656" r_length="176" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E373644" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E373644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99482" e_stop="99961"/>
          <exon e_start="100690" e_stop="100865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAGGTATATATATAGACTTTTTTATTTTTAATTTATTATTATTATTATTATTACTCTCTCCGTTTTCAAAAAAAAAATATCCCTATTTTCTTTTATAGTCTCTTTAATTTAAAAAGAATGATCTATTTTCTTTTTGGATAACCTTTTAACTTTGATTTTTCACGTGAAATGTTTAAAATCACGAGATTAAAGAGCATTTTGGTTACATTTGACATAACTGAAATTTAGAAACACAAGATTAAAGGACATTTTGGTACATTTGACATAACTTGAATTTAAAACCACATAATTAAAGGGCATTTTGGTACATTTGAATTAGAACATTTTGATACATTTGACATAACATGAATTTAGAACCACAAGATTAAAAAATCTTCTTTCTTTTTTCTTAAATTTCGTTCCAAGTCAAATTAGGTCATTCTTTTTTAATTACTCCCTCCGTCTAATTTTATGTAACAACATTTGACCGGACGGAGAGTTTTAAGAAATAAATAAAACACTTTGAGATGTGTACCAAATTGCTCTCCAAAAATACTCACTTTTCTCTCTCCTCATAAATGTATTTGAGTACTATTTTTAAAATTAAGCGAGTCCAACAAGAATAAAATAGAAACTGTACTTTTAAATATTTACCATATAAAAAAATGTGATTTTTTTTTTTTGAAAACTGATCAAAAAGAAAATGATATCACTCGACGATGAAAGTGTTTAATAATGAAAAAACATGACAGGCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACAC</genome_strand>
        <mrna_strand>GATTTTTTCCCAGTTTCATTGAAAGGTACTAATGGGTTGGATCAATACGGTGAAGAATACAAGTATGTGCTTAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACAAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTTGATAGTTGGAAGGGATTGAGACTCGATTATGGTAACTTCTACGCATCAAAGTCATTCTATGATCCAAGCAAAAATCGAAGGGTTATTTGGAGTTGGTCTAATGAATCAGATATTTTTCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTTGAAGAATTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGTGAAAAGATTGAAGTGACAGGAATCACACCAGCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCCACCGAAAACTTGGAAGAAAACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E329978" ref_strand="+" ref_description="SGN-E329978 [cTOD-5-J17]">
      <seq>aagataggtacgttccagatccagattctgtcgatagtttgaagggattgagactcgattacggtaacttctacgcatcgaagtcattctacgatccaagcaaaaatcgaagggttatctggggttggtctaatgaatcagatatattcccagaggatgataatgcgaagggatgggctgggattcaattgattcctcgtaaagtatggcttgatccaagtggtaagcagttggttcaatggcctgtggaggaactagaaaccctaagaactcaaaaggttcaattgagcaacaagaagatgaacaatggggagaagattgaagttacaggaatcacaccagcacaggctgatgttgaagtgacattctcatttgcaagtttggataaggcagagtcatttgatcctaaatggaatgatatgtatgcacaagatgtttgtggactcaagggtgcagatgttcaaggtgggcttgggccatttggtcttgctacattagctactgaaaacttggaagaaaacacaccggttttcttccgagttttcaaagcacagcaaaactacaaagttctcttgtgttctgacgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="99315" stop="101229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99615" g_stop="99961" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99962" i_stop="100689" i_length="728">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100690" g_stop="100929" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="587" r_length="240" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E329978" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329978" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99615" e_stop="99961"/>
          <exon e_start="100690" e_stop="100929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAGGTATATATATAGACTTTTTTATTTTTAATTTATTATTATTATTATTATTACTCTCTCCGTTTTCAAAAAAAAAATATCCCTATTTTCTTTTATAGTCTCTTTAATTTAAAAAGAATGATCTATTTTCTTTTTGGATAACCTTTTAACTTTGATTTTTCACGTGAAATGTTTAAAATCACGAGATTAAAGAGCATTTTGGTTACATTTGACATAACTGAAATTTAGAAACACAAGATTAAAGGACATTTTGGTACATTTGACATAACTTGAATTTAAAACCACATAATTAAAGGGCATTTTGGTACATTTGAATTAGAACATTTTGATACATTTGACATAACATGAATTTAGAACCACAAGATTAAAAAATCTTCTTTCTTTTTTCTTAAATTTCGTTCCAAGTCAAATTAGGTCATTCTTTTTTAATTACTCCCTCCGTCTAATTTTATGTAACAACATTTGACCGGACGGAGAGTTTTAAGAAATAAATAAAACACTTTGAGATGTGTACCAAATTGCTCTCCAAAAATACTCACTTTTCTCTCTCCTCATAAATGTATTTGAGTACTATTTTTAAAATTAAGCGAGTCCAACAAGAATAAAATAGAAACTGTACTTTTAAATATTTACCATATAAAAAAATGTGATTTTTTTTTTTTGAAAACTGATCAAAAAGAAAATGATATCACTCGACGATGAAAGTGTTTAATAATGAAAAAACATGACAGGCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCT</genome_strand>
        <mrna_strand>AAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAAGTTCTCTTGTGTTCTGACGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E546910" ref_strand="-" ref_description="SGN-E546910 [TUS-70-I8]">
      <seq>atgatccaagcaaaaatcgaagggtatttggagttggtctaatgaatcagatatttttccagaggatgataatgcgaagggatgggctgggattcaattgattcctcgtaaagtatggcttgatccaagtggtaagcagttggttcaatggcctgttgaagaattagaaaccctaagaactcaaaaggttcaattgagcaacaagaagatgaacaatggtgaaaagattgaagtgacaggaatcacaccagcacaggctgatgttgaagtgacattctcatttgcaagtttggataaggcagagtcatttgatcctaaatggaatgatatgtatgcacaagatgtttgtggactcaagggtgcagatgttcaaggtgggcttgggccatttggtcttgctacattagccactgaaaacttggaagaaaacacacctgttttcttccgagttttcaaagcacaacaaaactacaaggttctcttgtgctctgacgctaaaaggtcaactcttaagttcaatgaaacaatgtacaaagtttcatttgctggatttgttgatgttgatttggctgacaagaaattgtcactcagaagcttgattgataattcagttatagaaacttttggtgctcgtggaaagacatgtataacatcgagggtttatccaacattggcaattaacgacaaggcacatttattcgcgttcaacaacggaacggagccaatcacaattgagagtttggatgcatggagtatgggcaaagctaagatacaatatgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="99405" stop="101697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99705" g_stop="99961" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99962" i_stop="100689" i_length="728">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100690" g_stop="100934" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="501" r_length="245" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="0.951" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101033" g_stop="101129" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="598" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="101205" g_stop="101396" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="789" r_length="191" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E546910" ref_strand="-">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>791</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E546910" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="99705" e_stop="99961"/>
          <exon e_start="100690" e_stop="100934"/>
          <exon e_start="101033" e_stop="101129"/>
          <exon e_start="101205" e_stop="101396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAGGTATATATATAGACTTTTTTATTTTTAATTTATTATTATTATTATTATTACTCTCTCCGTTTTCAAAAAAAAAATATCCCTATTTTCTTTTATAGTCTCTTTAATTTAAAAAGAATGATCTATTTTCTTTTTGGATAACCTTTTAACTTTGATTTTTCACGTGAAATGTTTAAAATCACGAGATTAAAGAGCATTTTGGTTACATTTGACATAACTGAAATTTAGAAACACAAGATTAAAGGACATTTTGGTACATTTGACATAACTTGAATTTAAAACCACATAATTAAAGGGCATTTTGGTACATTTGAATTAGAACATTTTGATACATTTGACATAACATGAATTTAGAACCACAAGATTAAAAAATCTTCTTTCTTTTTTCTTAAATTTCGTTCCAAGTCAAATTAGGTCATTCTTTTTTAATTACTCCCTCCGTCTAATTTTATGTAACAACATTTGACCGGACGGAGAGTTTTAAGAAATAAATAAAACACTTTGAGATGTGTACCAAATTGCTCTCCAAAAATACTCACTTTTCTCTCTCCTCATAAATGTATTTGAGTACTATTTTTAAAATTAAGCGAGTCCAACAAGAATAAAATAGAAACTGTACTTTTAAATATTTACCATATAAAAAAATGTGATTTTTTTTTTTTGAAAACTGATCAAAAAGAAAATGATATCACTCGACGATGAAAGTGTTTAATAATGAAAAAACATGACAGGCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGTTGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCAAAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAA</genome_strand>
        <mrna_strand>ATGATCCAAGCAAAAATCGAAGGG-TATTTGGAGTTGGTCTAATGAATCAGATATTTTTCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTTGAAGAATTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGTGAAAAGATTGAAGTGACAGGAATCACACCAGCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCCACTGAAAACTTGGAAGAAAACACACCTGTTTTCTTCCGAGTTTTCAAAGCACAACAAAACTACAAGGTTCTCTTGTGCTCTGACGCTAAAAG..................................................................................................GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGTTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG...........................................................................ATTGATAATTCAGTTATAGAAACTTTTGGTGCTCGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACAAGGCACATTTATTCGCGTTCAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATA-TGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E547396" ref_strand="-" ref_description="SGN-E547396 [TUS-71-E3]">
      <seq>ttggtctaatgaatcagatatttttccagaggatgataatgcgaagggatgggctgggattcaattgattcctcgtaaagtatggcttgatccaagtggtaagcagttggttcaatggcctgttgaagaattagaaaccctaagaactcaaaaggttcaattgagcaacaagaagatgaacaatggtgaaaagattgaagtgacaggaatcacaccagcacaggctgatgttgaagtgacattctcatttgcaagtttggataaggcagagtcatttgatcctaaatggaatgatatgtatgcacaagatgtttgtggactcaagggtgcagatgttcaaggtgggcttgggccatttggtcttgctacattagccactgaaaacttggaagaaaacacacctgttttcttccgagttttcaaagcacaacaaaactacaaggttctcttgtgctctgacgctaaaaggtcaactcttaagttcaatgaaacaatgtacaaagtttcatttgctggatttgttgatgttgatttggctgacaagaaattgtcactcagaagcttgattgataattcagttatagaaacttttggtgctcgtggaaagacatgtataacatcgagggtttatccaacattggcaattaacgacaaggcacatttattcgcgttcaacaacggaacggagccaatcacaattgagagtttggatgcatggagtatgggcaaagctaagatacaatatgaaagaaaaaaaaaaaaaaaaaactcgaggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="99439" stop="101705"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99739" g_stop="99961" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99962" i_stop="100689" i_length="728">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100690" g_stop="100934" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="468" r_length="245" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="0.951" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101033" g_stop="101129" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="565" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="101205" g_stop="101401" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="762" r_length="197" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E547396" ref_strand="-">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E547396" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="99739" e_stop="99961"/>
          <exon e_start="100690" e_stop="100934"/>
          <exon e_start="101033" e_stop="101129"/>
          <exon e_start="101205" e_stop="101401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAGGTATATATATAGACTTTTTTATTTTTAATTTATTATTATTATTATTATTACTCTCTCCGTTTTCAAAAAAAAAATATCCCTATTTTCTTTTATAGTCTCTTTAATTTAAAAAGAATGATCTATTTTCTTTTTGGATAACCTTTTAACTTTGATTTTTCACGTGAAATGTTTAAAATCACGAGATTAAAGAGCATTTTGGTTACATTTGACATAACTGAAATTTAGAAACACAAGATTAAAGGACATTTTGGTACATTTGACATAACTTGAATTTAAAACCACATAATTAAAGGGCATTTTGGTACATTTGAATTAGAACATTTTGATACATTTGACATAACATGAATTTAGAACCACAAGATTAAAAAATCTTCTTTCTTTTTTCTTAAATTTCGTTCCAAGTCAAATTAGGTCATTCTTTTTTAATTACTCCCTCCGTCTAATTTTATGTAACAACATTTGACCGGACGGAGAGTTTTAAGAAATAAATAAAACACTTTGAGATGTGTACCAAATTGCTCTCCAAAAATACTCACTTTTCTCTCTCCTCATAAATGTATTTGAGTACTATTTTTAAAATTAAGCGAGTCCAACAAGAATAAAATAGAAACTGTACTTTTAAATATTTACCATATAAAAAAATGTGATTTTTTTTTTTTGAAAACTGATCAAAAAGAAAATGATATCACTCGACGATGAAAGTGTTTAATAATGAAAAAACATGACAGGCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGTTGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCAAAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGA</genome_strand>
        <mrna_strand>TTGGTCTAATGAATCAGATATTTTTCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTTGAAGAATTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGTGAAAAGATTGAAGTGACAGGAATCACACCAGCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCCACTGAAAACTTGGAAGAAAACACACCTGTTTTCTTCCGAGTTTTCAAAGCACAACAAAACTACAAGGTTCTCTTGTGCTCTGACGCTAAAAG..................................................................................................GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGTTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG...........................................................................ATTGATAATTCAGTTATAGAAACTTTTGGTGCTCGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACAAGGCACATTTATTCGCGTTCAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATGAAAGAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E373643" ref_strand="-" ref_description="SGN-E373643 [TUS-33-M18]">
      <seq>taaagtatggcttgatccaagtggtaagcagttggttcaatggcctgttgaagaattagaaaccctaagaactcaaaaggttcaattgagcaacaagaagatgaacaatggtgaaaagattgaagtgacaggaatcacaccagcacaggctgatgttgaagtgacattctcatttgcaagtttggataaggcagagtcatttgatcctaaatggaatgatatgtatgcacaagatgtttgtggactcaagggtgcagatgttcaaggtgggcttgggccatttggtcttgctacattagccaccgaaaacttggaagaaaacacacctgttttcttccgagttttcaaagcacaacaaaactacaaggttctcttgtgctctgacgctaaaaggtcaactcttaagttcaatgaaacaatgtacaaagtttcatttgctggatttgttgatgttgatttggctgacaagaaattgtcactcagaagcttgattgataattcagttatagaaacttttggtgctcgtggaaagacatgtataacatcgagggtttatccaacattggcaattaacgacaaggcacatttattcgcgttcaacaacggaacggagccaatcacaattgagagtttggatgcatggagtatgggcaaagctaagatacaatattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="99514" stop="101696"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99814" g_stop="99961" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99962" i_stop="100689" i_length="728">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100690" g_stop="100934" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="393" r_length="245" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="0.951" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101033" g_stop="101129" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="490" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="101205" g_stop="101394" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="680" r_length="190" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E373643" ref_strand="-">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E373643" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="99814" e_stop="99961"/>
          <exon e_start="100690" e_stop="100934"/>
          <exon e_start="101033" e_stop="101129"/>
          <exon e_start="101205" e_stop="101394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAGGTATATATATAGACTTTTTTATTTTTAATTTATTATTATTATTATTATTACTCTCTCCGTTTTCAAAAAAAAAATATCCCTATTTTCTTTTATAGTCTCTTTAATTTAAAAAGAATGATCTATTTTCTTTTTGGATAACCTTTTAACTTTGATTTTTCACGTGAAATGTTTAAAATCACGAGATTAAAGAGCATTTTGGTTACATTTGACATAACTGAAATTTAGAAACACAAGATTAAAGGACATTTTGGTACATTTGACATAACTTGAATTTAAAACCACATAATTAAAGGGCATTTTGGTACATTTGAATTAGAACATTTTGATACATTTGACATAACATGAATTTAGAACCACAAGATTAAAAAATCTTCTTTCTTTTTTCTTAAATTTCGTTCCAAGTCAAATTAGGTCATTCTTTTTTAATTACTCCCTCCGTCTAATTTTATGTAACAACATTTGACCGGACGGAGAGTTTTAAGAAATAAATAAAACACTTTGAGATGTGTACCAAATTGCTCTCCAAAAATACTCACTTTTCTCTCTCCTCATAAATGTATTTGAGTACTATTTTTAAAATTAAGCGAGTCCAACAAGAATAAAATAGAAACTGTACTTTTAAATATTTACCATATAAAAAAATGTGATTTTTTTTTTTTGAAAACTGATCAAAAAGAAAATGATATCACTCGACGATGAAAGTGTTTAATAATGAAAAAACATGACAGGCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGTTGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCAAAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAA</genome_strand>
        <mrna_strand>TAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTTGAAGAATTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGTGAAAAGATTGAAGTGACAGGAATCACACCAGCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCCACCGAAAACTTGGAAGAAAACACACCTGTTTTCTTCCGAGTTTTCAAAGCACAACAAAACTACAAGGTTCTCTTGTGCTCTGACGCTAAAAG..................................................................................................GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGTTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG...........................................................................ATTGATAATTCAGTTATAGAAACTTTTGGTGCTCGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACAAGGCACATTTATTCGCGTTCAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E225360" ref_strand="-" ref_description="SGN-E225360 [cLEL-17-D13]">
      <seq>tgacattctcatttgcaagtttggataaggcagagtcatttgatcctaaatggaatgatatgtatgccaagatgtttgtggactcaagggtgcagatgttcaaggtgggcttgggccatttggtcttgctacattagctactgaaaacttggaagaaaacacaccggttttcttccgagttttcaaagcacagcaaaactacaaggttctcttgtgttctgacgctaaaaggtcaactcttaagttcaatgaaacaatgtacaaagcttcatttgctggatttgttgatgttgatttggccgacaagaaattgtcactcaaaagcttgattgataattcagttatagaaacttttggtgctggtggaaagacatgtataacatggagggtttatccaacattggcaattaacgacgaggcacatttattcgcgtttaacaacggaacggagccaatcacaattgagagtttggatgcatggagtccgggcaaagctaagataccatataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="100403" stop="101705"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100703" g_stop="100934" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101033" g_stop="101129" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="328" r_length="97" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75">
            <donor d_prob="0.964" d_score="0.96"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101205" g_stop="101403" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="527" r_length="199" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E225360" ref_strand="-">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E225360" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="100703" e_stop="100934"/>
          <exon e_start="101033" e_stop="101129"/>
          <exon e_start="101205" e_stop="101403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGTTGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCAAAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGAAT</genome_strand>
        <mrna_strand>TGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGC-CAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAG..................................................................................................GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCCGACAAGAAATTGTCACTCAAAAGCTTG...........................................................................ATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATGGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTCCGGGCAAAGCTAAGATACCATATAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E218044" ref_strand="-" ref_description="SGN-E218044 [cLEL-23-A5]">
      <seq>gtcatttgatcctaaatggaatgatatgtatgcacaagatgtttgtggactcaaaggtgcagatgttcaaggtgggcttgggccatttggtcttgctacattagctactgaaaacttggaagaaaacacaccggttttcttccgagttttcaaagcacagcaaaactacaaggttctcttgtgttctgacgctaaaaggtcaactcttaagttcaatgaaacaatgtacaaagcttcatttgctggatttgttgatgttgatttggctgacaagaaattgtcactcagaagcttgattgataattcagttatagaaacttttggtgctggtggaaagacatgtataacatcgagggtttatccaacattggcaattaacgacgaggcacatttattcgcgtttaacaacggaacggagccaatcacaattgagagtttggatgcatggagtatgggcaaagctaagatacaatattgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="100437" stop="101702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100737" g_stop="100934" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101033" g_stop="101129" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="295" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101205" g_stop="101402" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="493" r_length="198" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E218044" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E218044" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="100737" e_stop="100934"/>
          <exon e_start="101033" e_stop="101129"/>
          <exon e_start="101205" e_stop="101402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGTTGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCAAAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGAA</genome_strand>
        <mrna_strand>GTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAAGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAG..................................................................................................GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG...........................................................................ATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E225721" ref_strand="-" ref_description="SGN-E225721 [cLEL-17-D1]">
      <seq>atatgtatgccaagatgtttgtggactcaagggtgcagatgttcaaggtgggcttgggccatttggtcttgctacattagtactgaaaacttggaagaaaacacaccggttttcttccgagttttcaaagcacagcaaaactacaaggttctcttgtgttctgacgctaaaaggtcaactcttaagttcaatgaaacaatgtacaaagcttcatttgctggatttgttgatgttgatttggctgacaagaaattgtcactcagaagcttgattgataattcagttatagaaacttttggtgctggtggaaagacatgtataacatcgagggtttatccaacattggcaattaacgacgaggcacatttattcgcgtttaacaacggaacggagccaatcacaattgagagtttggatgcatggagtatgggcaaagctaagatacaatattgaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="100460" stop="101705"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100760" g_stop="100934" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101033" g_stop="101129" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="270" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101205" g_stop="101404" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="470" r_length="200" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E225721" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E225721" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="100760" e_stop="100934"/>
          <exon e_start="101033" e_stop="101129"/>
          <exon e_start="101205" e_stop="101404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGTTGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCAAAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGAATA</genome_strand>
        <mrna_strand>ATATGTATGC-CAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAG-TACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAG..................................................................................................GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG...........................................................................ATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E225386" ref_strand="-" ref_description="SGN-E225386 [cLEL-17-F17]">
      <seq>gtgcagatgttcaaggtgggcttgggccatttggtcttgctacattagctactgaaaacttggaagaaaacacaccggttttcttccgagttttcaaagcacagcaaaactacaaggttctcttgtgttctgacgctaaaaggtcaactcttaagttcaatgaaacaatgtacaaagcttcatttgctggatttgttgatgttgatttggctgacaagaaattgtcactcagaagcttgattgataattcagttatagaaacttttggtgctggtggaaagacatgtataacatcgagggtttatccaacattggcaattaacgtcgaggcacatttattcgcgtttaacaacggaacggagccaatcacaattgagagtttggatgcatgccgtccgggcaaagctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="100493" stop="101674"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100793" g_stop="100934" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101033" g_stop="101129" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="239" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101205" g_stop="101374" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="409" r_length="170" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E225386" ref_strand="-">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E225386" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="100793" e_stop="100934"/>
          <exon e_start="101033" e_stop="101129"/>
          <exon e_start="101205" e_stop="101374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGTTGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCAAAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAA</genome_strand>
        <mrna_strand>GTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAG..................................................................................................GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG...........................................................................ATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGTCGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGCCGTCCGGGCAAAGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E225547" ref_strand="-" ref_description="SGN-E225547 [cLEL-17-D1]">
      <seq>tgttcaaggtgggcttgggccatttggtcttgctacattagctactgaaaacttggaagaaaacacaccggttttcttccgagttttcaaagcacagcaaaactacaaggttctcttgtgttctgacgctaaaaggtcaactcttaagttcaatgaaacaatgtacaaagcttcatttgctggatttgttgatgttgatttggctgacaagaaattgtcactcagaagcttgattgataattcagttatagaaacttttggtgctggtggaaagacatgtataacatcgagggtttatccaaccttggcaattaacgacgaggcacatttattcgcgtttaacaacggaacggagccaatcacaattgagagtttggatgcatggagtatgggcaaagctaagataccctaccgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="100500" stop="101702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100800" g_stop="100934" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101033" g_stop="101129" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="232" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101205" g_stop="101401" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="429" r_length="197" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E225547" ref_strand="-">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E225547" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="100800" e_stop="100934"/>
          <exon e_start="101033" e_stop="101129"/>
          <exon e_start="101205" e_stop="101401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGTTGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCAAAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGA</genome_strand>
        <mrna_strand>TGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAG..................................................................................................GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG...........................................................................ATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACCTTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACCCTACCGAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E217968" ref_strand="-" ref_description="SGN-E217968 [cLEL-23-A5]">
      <seq>gagttttcaaagcacagcaaaactacaaggttctcttgtgttctgacgctaaaaggtcaactcttaagttcaatgaaacaatgtacaaagcttcatttgctggatttgttgatgttgatttggctgacaagaaattgtcactcagaagcttgattgataattcagttatagaaacttttggtgctggtggaaagacatgtataacatcgagggtttatccaacattggcaattaacgacgaggcacatttattcgcgtttaacaacggaacggagccaatcacaattgagagtttggatgcatggagtatgggcaaagctaagatacaatattgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="100580" stop="101702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100880" g_stop="100934" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101033" g_stop="101129" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="152" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101205" g_stop="101402" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="350" r_length="198" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E217968" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>350</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217968" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="100880" e_stop="100934"/>
          <exon e_start="101033" e_stop="101129"/>
          <exon e_start="101205" e_stop="101402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGTTGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCAAAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGAA</genome_strand>
        <mrna_strand>GAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAG..................................................................................................GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG...........................................................................ATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E225196" ref_strand="+" ref_description="SGN-E225196 [cLEL-17-L14]">
      <seq>tttttttttttttttttttggaaaatctacaaaacattgaaaggtataaaatgtttggtaagtcagaatacattagcataaatattggagctcacagagtcatttgctgactcttgcatatacataattcctccttatcattaacaaagtagaaataaatatgatatatactatgaaaacacaaataagtcaaacataaaaaaagagatgaactttgtaatgaatggacacagaaaactgatctgttgctgttgctcagacagacgaaacatgttgcctcagctgtgtcgaaaaaaaagaaacaagatgatgtgggaacaaaggttcttgaattatgttggcaagtcagaatatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="1843" stop="102976"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101628" g_stop="101645" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="0.667"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101646" i_stop="102337" i_length="692">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102338" g_stop="102676" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="356" r_length="338" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E225196" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E225196" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101628" e_stop="101645"/>
          <exon e_start="102338" e_stop="102676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTATTTATTTTATTGATATATCTTTTAAATTTTAAATTTTAATATTTTATTTTATTATTATATTTACATAGCTACAGAATGGTCTAACAAATAAAAGAAGTTTGTCATTGAAAGGAAATAATTGGTTAAATCTTATCTGAAAAATAGTTTCAGATTATTTTTTAACATAGTTTTATTTTTCAGATAACATAGTTTGAGATAATGTTAAATAATATGATGTTGCATTGGGTATTTCCTGGATAAATAATTCATCTTTTGTTTCTACAGAGTTAAATAAAAATAGCAACCATCTTATTTTGAAGAAAGTGTTTTAATATTTTTTCGTTCAATTGTTTTTTCCAACTAAATAAATTGTATAACAAGAAGAAGCTCAAATGGACAAAATTTGTTTCTGATAAATTGTATTCAAACAAAAGTACAATTAGTGCTTTTTAGAGAATCCAGTTCCGGCGGAAGATTAAGTAAGGTGCGGTATAAAGACCAATCAATTTCCTACAACAGACAATAGAGGGCTCTGACGTGACCACGGTCAATGAGACTATTGTTCTGATTCTATAGAGTCTAACCTTGAAAAGAAAAGACTCGTTGTTTTTAAGCCTGGTCCAGGTGTGGGAGCTATACTTGATATACAAGTCGACTCGTGAACTACGGAGTACTCCAAATGTTTTACCAAACAGAAGAACAATGGGCAAACACCAATCCTGAGAAGTGGTAAAATCTACAAAACATTGAAAGGTATAAAATGTTTGGTAAGTCAGAATACATTAGCATAAATATTGGAGCTCACAGAGTCATTTGCTGACTCTTGCATATACATAATTCCTCCTTATCATTAACAAAGTAGAAATAAATATGATATATACTATGAAAACACAAATAAGTCAAACAAAAAAAAAGAGATGAACTTTGTAATGAATGGACACAGAAAACTGATCTGTTGCTGTTGCTCAGACAGACGAAACATGTTGCCTCAGCTGTGTCGAAAAAAAAGAAACAAGATGATGTGGGAACAAAGGTTCTTGAATTATGTTGGCAAGTCAGAATATCA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG-AAAATCTACAAAACATTGAAAGGTATAAAATGTTTGGTAAGTCAGAATACATTAGCATAAATATTGGAGCTCACAGAGTCATTTGCTGACTCTTGCATATACATAATTCCTCCTTATCATTAACAAAGTAGAAATAAATATGATATATACTATGAAAACACAAATAAGTCAAACATAAAAAAAGAGATGAACTTTGTAATGAATGGACACAGAAAACTGATCTGTTGCTGTTGCTCAGACAGACGAAACATGTTGCCTCAGCTGTGTCGAAAAAAAAGAAACAAGATGATGTGGGAACAAAGGTTCTTGAATTATGTTGGCAAGTCAGAATATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E251861" ref_strand="+" ref_description="SGN-E251861 [cLEG-14-B16]">
      <seq>aaaagttcattattaacattactaacagaagattttgatgtaaattattattaaatatataatttggcttcttttggcatttatagttaattttaggtaggtatgggaatgatgaatatctgttgtgtgaagggagaactccctgttgaatgtttacactaactgcttattgatattctgagctttctcttttgatattgtgcatccataatgtatttgtttccactctttctttcttcctggtgtattttttgtgtgtaggtgatctgctaatacactttggtaattcaatttatggcaagaatgatgagtctattagatgtgccagggttttttccccaatgagctaaaacttctgaggcttattgatattctgacttgccaacataattcaagaacctttgttcccacatcatcttgtttcttttttttcgacacagctgaggcaacatgtttcgtctgtctgagcaacagcaacagatcagttttctgtgtccattcattacaaagttcatctcttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="103342" stop="102218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103042" g_stop="102518" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E251861" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251861" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103042" e_stop="102518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTTCATTATTAACATTACTAACAGAAGATTTTGATGTAAATTATTATTAAATATATAATTTGGCTTCTTTTGGCATTTATAGTTAATTTTAGGTAGGTATGGGAATGATGAATATCTGTTGTGTGAAGGGAGAACTCCCTGTTGAATGTTTACACTAACTGCTTATTGATATTCTGAGCTTTCTCTTTTGATATTGTGCATCCATAATGTATTTGTTTCCACTCTTTCTTTCTTCCTGGTGTATTTTTTGTGTGTAGGTGATCTGCTAATACACTTTGGTAATTCAATTTATGGCAAGAATGATGAGTCTATTAGATGTGCCAGGGTTTTTTCCCCAATGAGCTAAAACTTCTGAGGCTTATTGATATTCTGACTTGCCAACATAATTCAAGAACCTTTGTTCCCACATCATCTTGTTTCTTTTTTTTCGACACAGCTGAGGCAACATGTTTCGTCTGTCTGAGCAACAGCAACAGATCAGTTTTCTGTGTCCATTCATTACAAAGTTCATCTCTTTTTTT</genome_strand>
        <mrna_strand>AAAAGTTCATTATTAACATTACTAACAGAAGATTTTGATGTAAATTATTATTAAATATATAATTTGGCTTCTTTTGGCATTTATAGTTAATTTTAGGTAGGTATGGGAATGATGAATATCTGTTGTGTGAAGGGAGAACTCCCTGTTGAATGTTTACACTAACTGCTTATTGATATTCTGAGCTTTCTCTTTTGATATTGTGCATCCATAATGTATTTGTTTCCACTCTTTCTTTCTTCCTGGTGTATTTTTTGTGTGTAGGTGATCTGCTAATACACTTTGGTAATTCAATTTATGGCAAGAATGATGAGTCTATTAGATGTGCCAGGGTTTTTTCCCCAATGAGCTAAAACTTCTGAGGCTTATTGATATTCTGACTTGCCAACATAATTCAAGAACCTTTGTTCCCACATCATCTTGTTTCTTTTTTTTCGACACAGCTGAGGCAACATGTTTCGTCTGTCTGAGCAACAGCAACAGATCAGTTTTCTGTGTCCATTCATTACAAAGTTCATCTCTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E207863" ref_strand="+" ref_description="SGN-E207863 [cLEC-34-G15]">
      <seq>gaagttacacgtcaggatatagcccatactttttgtcgagtcacatccgatgttgattctacttttttctagttgaggtggaatttgtgctatatttagcctttgctatggccagcatgatgaaaaacaattagatgtgcgagtggtgaattcctctatgagctcaatcatagaggcttattgatatactgacttgcatttgtgattcactctcttattttttgatttacatggtgttcattgatcccttaatttttgttggacctaactatgactataaaagttcattctttacattactaacagaagattttgatgtaaatgattattaaatatataatttggcttcttttggcatttatagctaattttaagtaggtatgggaatgatgaatatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="103620" stop="102621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103320" g_stop="102921" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E207863" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207863" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103320" e_stop="102921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTTACACGTCAGGATATAGCCCATACTTTTTGTGGTGTCACATCCGTTGTTGATTCTACTTTTTTCTAGTTGAGGTGGAATTTGTGCTATATTTAGCCTTTGCTATGGCAAGCATGATGAAAAACAATTAGATGTGCGAGTGGTGAATTCCTCTATGAGCTCAATCATCGAGGCTTATTGATATTCTGACTTGCATTTGTGATTCACTCTTTTATTTTTTGATTTACATGGTGTTCATTGATCCCTTAATTTTTGTTGGACCTAACTATGACTATAAAAGTTCATTATTAACATTACTAACAGAAGATTTTGATGTAAATTATTATTAAATATATAATTTGGCTTCTTTTGGCATTTATAGTTAATTTTAGGTAGGTATGGGAATGATGAATATCTG</genome_strand>
        <mrna_strand>GAAGTTACACGTCAGGATATAGCCCATACTTTTTGTCGAGTCACATCCGATGTTGATTCTACTTTTTTCTAGTTGAGGTGGAATTTGTGCTATATTTAGCCTTTGCTATGGCCAGCATGATGAAAAACAATTAGATGTGCGAGTGGTGAATTCCTCTATGAGCTCAATCATAGAGGCTTATTGATATACTGACTTGCATTTGTGATTCACTCTCTTATTTTTTGATTTACATGGTGTTCATTGATCCCTTAATTTTTGTTGGACCTAACTATGACTATAAAAGTTCATTCTTTACATTACTAACAGAAGATTTTGATGTAAATGATTATTAAATATATAATTTGGCTTCTTTTGGCATTTATAGCTAATTTTAAGTAGGTATGGGAATGATGAATATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E340059" ref_strand="+" ref_description="SGN-E340059 [cTOF-3-F9]">
      <seq>ctgttgaaaatgaaagttgctatctttttgttccaacaaaagatgctttgaatctccctaatttagatgtggtttgcagtatatttctatttatattcataacataactttgctatggcaagaatgatgataaactattagatgtgtgagtggtgtattcctctatgagctcaatcatcgaggcttattgatattctgacttgccttcttaaagtacttacaatagaaataaatggaactttttaattttgtgttctacaaatatgcttcattattgcatttgtactaatttttcacttgaagttgtagcaaattgttaagttgaaatatttatctgatttagaccttaactgaagttacacgtcaggatatagcccatactttttgtggtgtcacatccgttgttgattctacttttttctagttgaggtggaatttgtgctatatttagcctttgctatggcaagcatgatgaaaaacaattagatgtgcgagtggtgaattcctctatgagctcaatcatcgaggcttattgatattctgacttgcatttgtgattcactcttttattttttgatttacatggtgttcattgatcccttaatttttgttggacctaactatgactataaaagttcattattaacattactaacagaagattntgatgtaaattattattaaatatataattttggcttcttttggcatttatagttaattttaggtaggtatgggaatgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="103972" stop="102628"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103672" g_stop="102928" g_length="745"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="746" r_length="746" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E340059" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>745</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103672" e_stop="102928"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTGAAAATGAAAGTTGCTATCTTTTTGTTCCAACAAAAGATGCTTTGAATCTCCCTAATTTAGATGTGGTTTGCAGTATATTTCTATTTATATTCATAACATAACTTTGCTATGGCAAGAATGATGATAAACTATTAGATGTGTGAGTGGTGTATTCCTCTATGAGCTCAATCATCGAGGCTTATTGATATTCTGACTTGCCTTCTTAAAGTACTTACAATAGAAATAAATGGAACTTTTTAATTTTGTGTTCTACAAATATGCTTCATTATTGCATTTGTACTAATTTTTCACTTGAAGTTGTAGCAAATTGTTAAGTTGAAATATTTATCTGATTTAGACCTTAACTGAAGTTACACGTCAGGATATAGCCCATACTTTTTGTGGTGTCACATCCGTTGTTGATTCTACTTTTTTCTAGTTGAGGTGGAATTTGTGCTATATTTAGCCTTTGCTATGGCAAGCATGATGAAAAACAATTAGATGTGCGAGTGGTGAATTCCTCTATGAGCTCAATCATCGAGGCTTATTGATATTCTGACTTGCATTTGTGATTCACTCTTTTATTTTTTGATTTACATGGTGTTCATTGATCCCTTAATTTTTGTTGGACCTAACTATGACTATAAAAGTTCATTATTAACATTACTAACAGAAGATTTTGATGTAAATTATTATTAAATATATAA-TTTGGCTTCTTTTGGCATTTATAGTTAATTTTAGGTAGGTATGGGAATGATGA</genome_strand>
        <mrna_strand>CTGTTGAAAATGAAAGTTGCTATCTTTTTGTTCCAACAAAAGATGCTTTGAATCTCCCTAATTTAGATGTGGTTTGCAGTATATTTCTATTTATATTCATAACATAACTTTGCTATGGCAAGAATGATGATAAACTATTAGATGTGTGAGTGGTGTATTCCTCTATGAGCTCAATCATCGAGGCTTATTGATATTCTGACTTGCCTTCTTAAAGTACTTACAATAGAAATAAATGGAACTTTTTAATTTTGTGTTCTACAAATATGCTTCATTATTGCATTTGTACTAATTTTTCACTTGAAGTTGTAGCAAATTGTTAAGTTGAAATATTTATCTGATTTAGACCTTAACTGAAGTTACACGTCAGGATATAGCCCATACTTTTTGTGGTGTCACATCCGTTGTTGATTCTACTTTTTTCTAGTTGAGGTGGAATTTGTGCTATATTTAGCCTTTGCTATGGCAAGCATGATGAAAAACAATTAGATGTGCGAGTGGTGAATTCCTCTATGAGCTCAATCATCGAGGCTTATTGATATTCTGACTTGCATTTGTGATTCACTCTTTTATTTTTTGATTTACATGGTGTTCATTGATCCCTTAATTTTTGTTGGACCTAACTATGACTATAAAAGTTCATTATTAACATTACTAACAGAAGATTNTGATGTAAATTATTATTAAATATATAATTTTGGCTTCTTTTGGCATTTATAGTTAATTTTAGGTAGGTATGGGAATGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E334450" ref_strand="+" ref_description="SGN-E334450 [cTOD-23-M1]">
      <seq>ttaaaaattgttttttttgtatgtgaagtgtgtatgatgcgtggattgatcaaaatgctattgggtatgcattaatttctcttaaagatgtgatttttggaatatgttgcaacattttgatcgattggagctatataacaaagtgtgttgtgtatggattaatttgtttcattttgcgccgcccttaagatcgccttccattatgctccatggaagcgttttgagtcatagctgcgctatattaattgtatatatgcacactcttttgtatgtacaattgtatatatgaaaggtgtgttatatgctggagttttctctttagggttttcctttagtgagtctccttttgcctcgccttatttcaggagtcatatcctttttttttggttttgtctttcccaattggggatatagaaccaaaagatgttttgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="105346" stop="104312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105046" g_stop="104612" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="435" r_length="435" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E334450" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>435</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334450" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105046" e_stop="104612"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAAAATTGTTTTTTTTGTATGTGAAGTGTGTATGATGCGTGGATTGATCAAAATGCTATTGGGTATGCATTAATTTCTCTTAAAGATGTGATTTTTGGAATATGTTGCAACATTTTGATCGATTGGAGCTATATAACAAAGTGTGTTGTGTATGGATTAATTTGTTTCATTTTGCGCCGCCCTTAAGATCGCCTTCCATTATGCTCCATGGAAGCGTTTTGAGTCATAGCTGCGCTATATTAATTGTATATATGCACACTCTTTTGTATGTACAATTGTATATATGAAAGGTGTGTTATATGCTGGAGTTTTCTCTTTAGGGTTTTCCTTTAGTGAGTCTCCTTTTGCCTCGCCTTATTTCAGGAGTCATATCCTTTTTTTTTGGTTTTGTCTTTCCCAATTGGGGATATAGAACCAAAAGATGTTTTGAATG</genome_strand>
        <mrna_strand>TTAAAAATTGTTTTTTTTGTATGTGAAGTGTGTATGATGCGTGGATTGATCAAAATGCTATTGGGTATGCATTAATTTCTCTTAAAGATGTGATTTTTGGAATATGTTGCAACATTTTGATCGATTGGAGCTATATAACAAAGTGTGTTGTGTATGGATTAATTTGTTTCATTTTGCGCCGCCCTTAAGATCGCCTTCCATTATGCTCCATGGAAGCGTTTTGAGTCATAGCTGCGCTATATTAATTGTATATATGCACACTCTTTTGTATGTACAATTGTATATATGAAAGGTGTGTTATATGCTGGAGTTTTCTCTTTAGGGTTTTCCTTTAGTGAGTCTCCTTTTGCCTCGCCTTATTTCAGGAGTCATATCCTTTTTTTTTGGTTTTGTCTTTCCCAATTGGGGATATAGAACCAAAAGATGTTTTGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E688112" ref_strand="+" ref_description="SGN-E688112 [T3_tus_85_L05]">
      <seq>cttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcacaattctgttagttataaagctttatttcattatggataaaaaaaaaaaaaaaaaaaaaaacctcgggggggggcccgggcccctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109125" stop="95889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108825" g_stop="108769" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="177" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="223" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="309" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="439" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106239" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="778" r_length="339" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="106238" i_stop="105660" i_length="579">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.50"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="105659" g_stop="105609" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="779" r_stop="826" r_length="48" r_score="0.510"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E688112" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>829</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688112" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108825" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106239"/>
          <exon e_start="105659" e_stop="105609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGATATATACTTGATAAAACGAATTGCATAAACAACTGTTTTCAGGACGTTGTATAGTCGAAATTTATAAAGATGAAATTGAGATTTTGAAATTATACAATTTTAGTATAAATATTTGAATAAAATCATTCAAAGATTAACTATTATTTCAAAGTAAAACATGGAATAAAGTTTAACCCCCAAATAGTATTTTGAAACAAGCTATGTTTGAAATAAAAAGATACCTTTCAATAACAAATTGGAAAATTAGGAAGTCTTATATTAAAGACTAGTAAAAACAACTTTTACATGCATTATTTACTTGAAGAGGAAAGACTCAAATATGTCATCGTATTAAAAATTTGACTCATCATTCATATCATTATTTGTTAATTGAAATGATATATATGAATCAATTTTTTTTTAAAATGACATAAATGAATCTTTTTTTTTTTATAAGTTTGATGACATGCTTGAGTTTTTGTCCTTTTTAAAACGTGATTTAATTAATGTCATCCATATCACATGTAAAAGATAATTTTGCAAAATCAAAACTGTTTTTAGGTAACAAATAATGACATGGATAAATTTTTTTTATAAAAAGAAAAATGACATAAATAAACTAAACTTTTAACGATTGATGTACATGAATCTT</genome_strand>
        <mrna_strand>CTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAC--CT-CGGGGGGGGGCCCGGGCCCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E355415" ref_strand="+" ref_description="SGN-E355415 [cTOS-25-E6]">
      <seq>gaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="107021" stop="1843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106721" g_stop="106705" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106577" g_stop="106295" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="300" r_length="283" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106294" i_stop="105700" i_length="595">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.256" a_score="0.52"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105699" g_stop="105637" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="363" r_length="63" r_score="0.556"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E355415" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>363</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106721" e_stop="106705"/>
          <exon e_start="106577" e_stop="106295"/>
          <exon e_start="105699" e_stop="105637"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGATATATACTTGATAAAACGAATTGCATAAACAACTGTTTTCAGGACGTTGTATAGTCGAAATTTATAAAGATGAAATTGAGATTTTGAAATTATACAATTTTAGTATAAATATTTGAATAAAATCATTCAAAGATTAACTATTATTTCAAAGTAAAACATGGAATAAAGTTTAACCCCCAAATAGTATTTTGAAACAAGCTATGTTTGAAATAAAAAGATACCTTTCAATAACAAATTGGAAAATTAGGAAGTCTTATATTAAAGACTAGTAAAAACAACTTTTACATGCATTATTTACTTGAAGAGGAAAGACTCAAATATGTCATCGTATTAAAAATTTGACTCATCATTCATATCATTATTTGTTAATTGAAATGATATATATGAATCAATTTTTTTTTAAAATGACATAAATGAATCTTTTTTTTTTTATAAGTTTGATGACATGCTTGAGTTTTTGTCCTTTTTAAAACGTGATTTAATTAATGTCATCCATATCACATGTAAAAGATAATTTTGCAAAATCAAAACTGTTTTTAGGTAACAAATAATGACATGGATAAATTTTTTTTATAAAAAGAAAAATGACATAAATAAACTAAA</genome_strand>
        <mrna_strand>GAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E301654" ref_strand="-" ref_description="SGN-E301654 [cLEW-23-I16]">
      <seq>ttttttttttttttttttttttttttttttttttttatccaacaattagcctgcataaaccaaatttaagagaacttaactatctcgaaaagctggcaaactcaaaatgaaggtggtttcgaaaccaaaagtgctcaactacagagtgttcagaaatcaaatgtaaatagatatcgaaagctgcatttttcgacaacaatattttcctccaatttgcaacatgctgcagaaaagagaaagagtcttcacagcctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="1843" stop="106820"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105639" g_stop="105665" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="0.704"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105666" i_stop="106291" i_length="626">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106292" g_stop="106520" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="256" r_length="229" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E301654" ref_strand="-">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>256</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301654" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="105639" e_stop="105665"/>
          <exon e_start="106292" e_stop="106520"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTTATTTATGTCATTTTTCTTTTTATAAAAAAAATTTATCCATGTCATTATTTGTTACCTAAAAACAGTTTTGATTTTGCAAAATTATCTTTTACATGTGATATGGATGACATTAATTAAATCACGTTTTAAAAAGGACAAAAACTCAAGCATGTCATCAAACTTATAAAAAAAAAAAGATTCATTTATGTCATTTTAAAAAAAAATTGATTCATATATATCATTTCAATTAACAAATAATGATATGAATGATGAGTCAAATTTTTAATACGATGACATATTTGAGTCTTTCCTCTTCAAGTAAATAATGCATGTAAAAGTTGTTTTTACTAGTCTTTAATATAAGACTTCCTAATTTTCCAATTTGTTATTGAAAGGTATCTTTTTATTTCAAACATAGCTTGTTTCAAAATACTATTTGGGGGTTAAACTTTATTCCATGTTTTACTTTGAAATAATAGTTAATCTTTGAATGATTTTATTCAAATATTTATACTAAAATTGTATAATTTCAAAATCTCAATTTCATCTTTATAAATTTCGACTATACAACGTCCTGAAAACAGTTGTTTATGCAATTCGTTTTATCAAGTATATATCCATAATGAAATAAAGCTTTATAACTAACAGAATTGTGAAGATAAAAAGAGTATAAATTTATCCAACAATTAGCCTGCATAAACCAAATTTAAGAGAACTTAACTATCTCGAAAAGCTGGCAAACTCAAAATGAAGGTGGTTTCGAAACCAAAAGTGCTCAACTACAGAGTGTTCAGAAATCAAATGTAAATAGATATCGAAAGCTGCATTTTTCGACAACAATATTTTCCTCCAATTTGCAACATGCTGCAGAAAAGAGAAAGAGTCTTCACAGCCTCC</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTATCCAACAATTAGCCTGCATAAACCAAATTTAAGAGAACTTAACTATCTCGAAAAGCTGGCAAACTCAAAATGAAGGTGGTTTCGAAACCAAAAGTGCTCAACTACAGAGTGTTCAGAAATCAAATGTAAATAGATATCGAAAGCTGCATTTTTCGACAACAATATTTTCCTCCAATTTGCAACATGCTGCAGAAAAGAGAAAGAGTCTTCACAGCCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E224691" ref_strand="+" ref_description="SGN-E224691 [cLEL-27-J11]">
      <seq>ttttttttttttttttttttttttttttngggaagataaaaagagtgtaaatttatccaacaattagcctgcataaaccaaatttaagagaacttaactatctcgaaaagctggcaaactaaaaatgaaggtggtttcgaaaccaaaagtgctcaactacagagtgttcagaaatcaaatgtaaatagatatcgaaagctgcatttttcgacaacaatattttcctacaatgggaaacatgctgcagaaaagagaaagagtttggacacaccaacattcttttctaccaccctttctgcgagtacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="+" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="1843" stop="106852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105641" g_stop="105665" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="0.720"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105666" i_stop="106271" i_length="606">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106272" g_stop="106552" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="307" r_length="282" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="+" ref_id="SGN-E224691" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>306</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E224691" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105641" e_stop="105665"/>
          <exon e_start="106272" e_stop="106552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTATTTATGTCATTTTTCTTTTTATAAAAAAAATTTATCCATGTCATTATTTGTTACCTAAAAACAGTTTTGATTTTGCAAAATTATCTTTTACATGTGATATGGATGACATTAATTAAATCACGTTTTAAAAAGGACAAAAACTCAAGCATGTCATCAAACTTATAAAAAAAAAAAGATTCATTTATGTCATTTTAAAAAAAAATTGATTCATATATATCATTTCAATTAACAAATAATGATATGAATGATGAGTCAAATTTTTAATACGATGACATATTTGAGTCTTTCCTCTTCAAGTAAATAATGCATGTAAAAGTTGTTTTTACTAGTCTTTAATATAAGACTTCCTAATTTTCCAATTTGTTATTGAAAGGTATCTTTTTATTTCAAACATAGCTTGTTTCAAAATACTATTTGGGGGTTAAACTTTATTCCATGTTTTACTTTGAAATAATAGTTAATCTTTGAATGATTTTATTCAAATATTTATACTAAAATTGTATAATTTCAAAATCTCAATTTCATCTTTATAAATTTCGACTATACAACGTCCTGAAAACAGTTGTTTATGCAATTCGTTTTATCAAGTATATATCCATAATGAAATAAAGCTTTATAACTAACAGAATTGTGAAGATAAAAAGAGTATAAATTTATCCAACAATTAGCCTGCATAAACCAAATTTAAGAGAACTTAACTATCTCGAAAAGCTGGCAAACTCAAAATGAAGGTGGTTTCGAAACCAAAAGTGCTCAACTACAGAGTGTTCAGAAATCAAATGTAAATAGATATCGAAAGCTGCATTTTTCGACAACAATATTTTCCTCCAATTTGCAACATGCTGCAGAAAAGAGAAAGAGTCTTCACA-GCCTCCTTCCCCTTCTACCACCCTTTCTGCGAGTACTA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTNGGGAAGATAAAAAGAGTGTAAATTTATCCAACAATTAGCCTGCATAAACCAAATTTAAGAGAACTTAACTATCTCGAAAAGCTGGCAAACTAAAAATGAAGGTGGTTTCGAAACCAAAAGTGCTCAACTACAGAGTGTTCAGAAATCAAATGTAAATAGATATCGAAAGCTGCATTTTTCGACAACAATATTTTCCTACAATGGGAAACATGCTGCAGAAAAGAGAAAGAGTTTGGACACACCAACATTCTTTTCTACCACCCTTTCTGCGAGTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E597160" ref_strand="+" ref_description="SGN-E597160 [40657]">
      <seq>gtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattccaaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttgtggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaacttctcttaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108219" stop="1841"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107919" g_stop="107845" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="205" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106577" g_stop="106329" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="451" r_length="246" r_score="0.948"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106328" i_stop="105660" i_length="669">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105659" g_stop="105642" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="469" r_length="18" r_score="0.722"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E597160" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E597160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107919" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106329"/>
          <exon e_start="105659" e_stop="105642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGATATATACTTGATAAAACGAATTGCATAAACAACTGTTTTCAGGACGTTGTATAGTCGAAATTTATAAAGATGAAATTGAGATTTTGAAATTATACAATTTTAGTATAAATATTTGAATAAAATCATTCAAAGATTAACTATTATTTCAAAGTAAAACATGGAATAAAGTTTAACCCCCAAATAGTATTTTGAAACAAGCTATGTTTGAAATAAAAAGATACCTTTCAATAACAAATTGGAAAATTAGGAAGTCTTATATTAAAGACTAGTAAAAACAACTTTTACATGCATTATTTACTTGAAGAGGAAAGACTCAAATATGTCATCGTATTAAAAATTTGACTCATCATTCATATCATTATTTGTTAATTGAAATGATATATATGAATCAATTTTTTTTTAAAATGACATAAATGAATCTTTTTTTTTTTATAAGTTTGATGACATGCTTGAGTTTTTGTCCTTTTTAAAACGTGATTTAATTAATGTCATCCATATCACATGTAAAAGATAATTTTGCAAAATCAAAACTGTTTTTAGGTAACAAATAATGACATGGATAAATTTTTTTTATAAAAAGAAAAATGACATAAATAAA</genome_strand>
        <mrna_strand>GTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCAACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTGTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAACTTCTCTTAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E602918" ref_strand="+" ref_description="SGN-E602918 [55994]">
      <seq>gcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaaattctcttaaatttggtttatgtaggctgtttgttggataaatttatactgttttggtttatcttacaagtcttttttgttaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="107059" stop="1843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106759" g_stop="106705" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106577" g_stop="106270" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="363" r_length="308" r_score="0.919"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106269" i_stop="105676" i_length="594">
            <donor d_prob="0.000" d_score="0.72"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105675" g_stop="105643" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="396" r_length="33" r_score="0.758"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E602918" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>396</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E602918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106759" e_stop="106705"/>
          <exon e_start="106577" e_stop="106270"/>
          <exon e_start="105675" e_stop="105643"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTT--TATCT-TCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGATATATACTTGATAAAACGAATTGCATAAACAACTGTTTTCAGGACGTTGTATAGTCGAAATTTATAAAGATGAAATTGAGATTTTGAAATTATACAATTTTAGTATAAATATTTGAATAAAATCATTCAAAGATTAACTATTATTTCAAAGTAAAACATGGAATAAAGTTTAACCCCCAAATAGTATTTTGAAACAAGCTATGTTTGAAATAAAAAGATACCTTTCAATAACAAATTGGAAAATTAGGAAGTCTTATATTAAAGACTAGTAAAAACAACTTTTACATGCATTATTTACTTGAAGAGGAAAGACTCAAATATGTCATCGTATTAAAAATTTGACTCATCATTCATATCATTATTTGTTAATTGAAATGATATATATGAATCAATTTTTTTTTAAAATGACATAAATGAATCTTTTTTTTTTTATAAGTTTGATGACATGCTTGAGTTTTTGTCCTTTTTAAAACGTGATTTAATTAATGTCATCCATATCACATGTAAAAGATAATTTTGCAAAATCAAAACTGTTTTTAGGTAACAAATAATGACATGGATAAATTTTTTTTATAAAAAGAAAAATGACATAAATAA</genome_strand>
        <mrna_strand>GCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAATTTGGTTTATGTAGGCTGTTTGTTGGATAAATTTATACTGTTTTGGTTTATCTTACAAGTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E545733" ref_strand="-" ref_description="SGN-E545733 [TUS-68-L19]">
      <seq>tttcttcaagctgctgagtatctctgattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="1845"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="179" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="225" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="311" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="441" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106299" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="720" r_length="279" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="106298" i_stop="105700" i_length="599">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.256" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="105699" g_stop="105686" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="721" r_stop="734" r_length="14" r_score="0.571"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E545733" ref_strand="-">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545733" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106299"/>
          <exon e_start="105699" e_stop="105686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGATATATACTTGATAAAACGAATTGCATAAACAACTGTTTTCAGGACGTTGTATAGTCGAAATTTATAAAGATGAAATTGAGATTTTGAAATTATACAATTTTAGTATAAATATTTGAATAAAATCATTCAAAGATTAACTATTATTTCAAAGTAAAACATGGAATAAAGTTTAACCCCCAAATAGTATTTTGAAACAAGCTATGTTTGAAATAAAAAGATACCTTTCAATAACAAATTGGAAAATTAGGAAGTCTTATATTAAAGACTAGTAAAAACAACTTTTACATGCATTATTTACTTGAAGAGGAAAGACTCAAATATGTCATCGTATTAAAAATTTGACTCATCATTCATATCATTATTTGTTAATTGAAATGATATATATGAATCAATTTTTTTTTAAAATGACATAAATGAATCTTTTTTTTTTTATAAGTTTGATGACATGCTTGAGTTTTTGTCCTTTTTAAAACGTGATTTAATTAATGTCATCCATATCACATGTAAAAGATAATTTTGCAAAATCAAAACTGTTTTTAGGTAACAAATAATGA</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTG-ATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E604118" ref_strand="+" ref_description="SGN-E604118 [67309]">
      <seq>tgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattccaaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttgtggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaacttctcttaaatttggtttatgtaggcttattgttggataaatttatactgttttggtttatcttacaagtctgttttgttataaagctttatttcatctaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108202" stop="1847"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107902" g_stop="107845" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="188" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106577" g_stop="106239" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="529" r_length="341" r_score="0.897"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106238" i_stop="105700" i_length="539">
            <donor d_prob="0.900" d_score="0.63"/>
            <acceptor a_prob="0.256" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105699" g_stop="105689" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="540" r_length="11" r_score="0.636"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E604118" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107902" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106239"/>
          <exon e_start="105699" e_stop="105689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTT--TATCT-TCACAATTCTG-TTAGTTATAAAGCTTTATTTCAT-TATGGATATATACTTGATAAAACGAATTGCATAAACAACTGTTTTCAGGACGTTGTATAGTCGAAATTTATAAAGATGAAATTGAGATTTTGAAATTATACAATTTTAGTATAAATATTTGAATAAAATCATTCAAAGATTAACTATTATTTCAAAGTAAAACATGGAATAAAGTTTAACCCCCAAATAGTATTTTGAAACAAGCTATGTTTGAAATAAAAAGATACCTTTCAATAACAAATTGGAAAATTAGGAAGTCTTATATTAAAGACTAGTAAAAACAACTTTTACATGCATTATTTACTTGAAGAGGAAAGACTCAAATATGTCATCGTATTAAAAATTTGACTCATCATTCATATCATTATTTGTTAATTGAAATGATATATATGAATCAATTTTTTTTTAAAATGACATAAATGAATCTTTTTTTTTTTATAAGTTTGATGACATGCTTGAGTTTTTGTCCTTTTTAAAACGTGATTTAATTAATGTCATCCATATCACATGTAAAAGATAATTTTGCAAAATCAAAACTGTTTTTAGGTAACAAATAA</genome_strand>
        <mrna_strand>TGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCAACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTGTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAACTTCTCTTAAATTTGGTTTATGTAGGCTTATTGTTGGATAAATTTATACTGTTTTGGTTTATCTTACAAGTCTGTTTTGTTATAAAGCTTTATTTCATCTAAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E203238" ref_strand="-" ref_description="SGN-E203238 [cLEB-3-E17]">
      <seq>aactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttaaaaaaaaaaaaaaaaaactcgctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108695" stop="1830"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108395" g_stop="108376" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="106" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="236" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106577" g_stop="106275" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="539" r_length="303" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106274" i_stop="105976" i_length="299">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="105975" g_stop="105951" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="540" r_stop="564" r_length="25" r_score="0.600"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E203238" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203238" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="108395" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106275"/>
          <exon e_start="105975" e_stop="105951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGATATATACTTGATAAAACGAATTGCATAAACAACTGTTTTCAGGACGTTGTATAGTCGAAATTTATAAAGATGAAATTGAGATTTTGAAATTATACAATTTTAGTATAAATATTTGAATAAAATCATTCAAAGATTAACTATTATTTCAAAGTAAAACATGGAATAAAGTTTAACCCCCAAATAGTATTTTGAAACAAGCTATGTTTGAAATAAAAAGATACCTTTCAATAACAAATTGGAAAATTAGGAAGTCTTATATTAAAGACTAGTAAAAACAACTTTTACATGC</genome_strand>
        <mrna_strand>AACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTAAAA...........................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAACTCGCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E721847" ref_strand="+" ref_description="SGN-E721847 [FC15BH08]">
      <seq>aatcggccgaattgccactgcaaattagggtttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcacaattctgttagttataaagctttatttcattatggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109146" stop="105939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108858" g_stop="108769" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="210" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="256" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="342" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="472" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106239" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="811" r_length="339" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E721847" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>811</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E721847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108858" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTGTGAGCTTCCACTGCAAATTAGGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT</genome_strand>
        <mrna_strand>AATCGGCCGAATTGCCACTGCAAATTAGGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E346787" ref_strand="+" ref_description="SGN-E346787 [cTOF-32-C18]">
      <seq>agctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcacattctgttagttataaagctttatttcattatggataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109120" stop="105934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108820" g_stop="108769" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="172" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="218" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="304" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="434" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106239" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="772" r_length="338" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="773" polyA_stop="782"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E346787" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108820" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT</genome_strand>
        <mrna_strand>AGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCAC-ATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E339097" ref_strand="+" ref_description="SGN-E339097 [cTOF-6-M21]">
      <seq>aacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcacaattctgttagttataaagctttatttcattatggataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="107086" stop="105934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106786" g_stop="106705" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106577" g_stop="106239" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="421" r_length="339" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E339097" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339097" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106786" e_stop="106705"/>
          <exon e_start="106577" e_stop="106239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT</genome_strand>
        <mrna_strand>AACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E251038" ref_strand="-" ref_description="SGN-E251038 [cLEG-17-L15]">
      <seq>gcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcacaattctgttagttataaagctttatttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108856" stop="105948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108556" g_stop="108521" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="82" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="168" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="298" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106247" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="629" r_length="331" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E251038" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251038" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="108556" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCA</genome_strand>
        <mrna_strand>GCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E250400" ref_strand="+" ref_description="SGN-E250400 [cLEG-6-D5]">
      <seq>gtggaagagaaactatggttcgcattactggtggaatgaaagtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaagatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcacaattctgttagttataaagctttatttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108704" stop="105947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108405" g_stop="108376" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="116" r_length="86" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="246" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106577" g_stop="106247" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="577" r_length="331" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E250400" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250400" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108405" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCA</genome_strand>
        <mrna_strand>GTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAAGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAAGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E252705" ref_strand="-" ref_description="SGN-E252705 [cLEG-16-G6]">
      <seq>tgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcacaattctgttagttataaagctttattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108875" stop="105949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108575" g_stop="108521" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="101" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="187" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="317" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106249" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="646" r_length="329" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E252705" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252705" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="108575" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTT</genome_strand>
        <mrna_strand>TGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E302621" ref_strand="-" ref_description="SGN-E302621 [cLEX-1-I13]">
      <seq>cggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcacaattctgttagttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108863" stop="105958"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108563" g_stop="108521" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="89" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="175" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="305" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106252" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="631" r_length="326" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E302621" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302621" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="108563" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106252"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTA</genome_strand>
        <mrna_strand>CGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E328964" ref_strand="+" ref_description="SGN-E328964 [cTOC-24-L24]">
      <seq>ttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcacaattctgttagttaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109124" stop="105959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108824" g_stop="108769" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="176" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="222" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="308" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="438" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106259" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="757" r_length="319" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E328964" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328964" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108824" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAA</genome_strand>
        <mrna_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E284928" ref_strand="-" ref_description="SGN-E284928 [cLER-19-H12]">
      <seq>gtcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcacaattctgttaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108841" stop="105966"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108542" g_stop="108521" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="68" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="154" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="284" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106260" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="602" r_length="318" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E284928" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284928" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="108542" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATA</genome_strand>
        <mrna_strand>GTCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E216159" ref_strand="-" ref_description="SGN-E216159 [cLEL-13-O16]">
      <seq>ggcacgagggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcaaaaaaaaaaaaaaaactcgactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="106841" stop="105974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106541" g_stop="106275" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="268" polyA_stop="281"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E216159" ref_strand="-">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>267</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E216159" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="106541" e_stop="106275"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACA</genome_strand>
        <mrna_strand>GGCACGAGGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E216401" ref_strand="-" ref_description="SGN-E216401 [cLEL-13-O6]">
      <seq>gggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttatcttcaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="106833" stop="105974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106534" g_stop="106275" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="261" polyA_stop="274"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E216401" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>260</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E216401" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="106534" e_stop="106275"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACA</genome_strand>
        <mrna_strand>GGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E588165" ref_strand="+" ref_description="SGN-E588165 [41712]">
      <seq>cttcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaaattctcttaaatttggtttatgtaggctgtttgttggataaatttatactggttttggtttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109125" stop="105984"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108825" g_stop="108769" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="177" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="223" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="309" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="439" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106276" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="738" r_length="299" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E588165" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E588165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108825" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106276"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCAC</genome_strand>
        <mrna_strand>CTTCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAATTTGGTTTATGTAGGCTGTTTGTTGGATAAATTTATACTGGTTTTGGTTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E298315" ref_strand="+" ref_description="SGN-E298315 [cLET-41-A16]">
      <seq>ctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcatcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaagctaattgttggataaatttatactctttttatcttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="107040" stop="105976"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106740" g_stop="106705" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106577" g_stop="106276" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="338" r_length="302" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E298315" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106740" e_stop="106705"/>
          <exon e_start="106577" e_stop="106276"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCAC</genome_strand>
        <mrna_strand>CTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCATCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAAGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E345976" ref_strand="+" ref_description="SGN-E345976 [cTOF-24-C21]">
      <seq>tttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggttagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcactttttggtttcgaaaccaccttcatttttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaatttatactctttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="105984"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106283" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="741" r_length="299" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E345976" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>737</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345976" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGG-TAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGG-AAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCAC-TTTTGGTTTCGAAACCACCTTCA-TTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTA</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTTGGTTTCGAAACCACCTTCATTTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E400629" ref_strand="+" ref_description="SGN-E400629 [PPC-1-L19]">
      <seq>ttcaagctgctgagtatctctgtactttctcaccaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacaccttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacacttntgtagttgagcactttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaaattctcttaaatttggtttatgtanngctgtttgttggataaatttatactgtttttggtttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109124" stop="105984"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108824" g_stop="108769" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.857"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.84"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="177" r_length="121" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="223" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="309" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="439" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106284" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="733" r_length="294" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="739" polyA_stop="750"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E400629" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E400629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108824" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106284"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACA-CTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACAC-TCTGTAGTTGAGCAC-TTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCA-GGCTAATTGTTGGATAAATTTATACTCTTTTT</genome_strand>
        <mrna_strand>TTCAAGCTGCTGAGTATCTCTGTACTTTCTCACCACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACCTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTNTGTAGTTGAGCACTTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAATTTGGTTTATGTANNGCTGTTTGTTGGATAAATTTATACTGTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E588745" ref_strand="-" ref_description="SGN-E588745 [42305]">
      <seq>gttgcacacatttttgcatcgttcaatgatacaatcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaaattctcttaaatttggtttatgtaggctgtttgttggataaatttatactgttttggtttatcttacaagtcttttttgttaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108859" stop="105978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108559" g_stop="108521" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="85" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="171" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="301" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106284" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="592" r_length="291" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E588745" ref_strand="-">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E588745" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="108559" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106284"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTT</genome_strand>
        <mrna_strand>GTTGCACACATTTTTGCATCGTTCAATGATACAATCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAATTTGGTTTATGTAGGCTGTTTGTTGGATAAATTTATACTGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E458997" ref_strand="+" ref_description="SGN-E458997 [cPRO-33-E7]">
      <seq>gtttcttcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaacaccttcattttgagttggtcagcttttcgagatagtgaaattctcnttaatttggtttatgtaggctgtttgttggataaatttatactggtttggtttatcttaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="105974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.885"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="443" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106290" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="727" r_length="284" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="743" polyA_stop="755"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E458997" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E458997" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACT</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAA-CACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCNTTAATTTGGTTTATGTAGGCTGTTTGTTGGATAAATTTATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E451510" ref_strand="+" ref_description="SGN-E451510 [cSTS-12-P16]">
      <seq>cttcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaaattctctttaatttggtttatgtaggctggttgttggataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109125" stop="105998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108825" g_stop="108769" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="177" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="223" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="309" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="439" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106292" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="722" r_length="283" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E451510" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451510" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108825" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106292"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATA</genome_strand>
        <mrna_strand>CTTCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTTAATTTGGTTTATGTAGGCTGGTTGTTGGATAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E486121" ref_strand="+" ref_description="SGN-E486121 [cSTE-21-I11]">
      <seq>gctgaatatctctgaactttctcactaccaagctcagccggaaccatgtcgaagagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggagggtgaattggtgttcggtgttgcgcacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattccaaccgatagtactcgcagaaagggtggtaaaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcaactttcgatatctatttacatttgatttctgaacacttttgagttgagcactggtggtttcgaaccaccctcattttgagttggtcagcttttcgagaatatgacctctctttaatttggttatgtaggcttattgctggataaattatactggtttgggttatcctacaatctggtttggtaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="105985"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108816" g_stop="108769" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.875"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.88"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="168" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="214" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="300" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="430" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106295" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="707" r_length="277" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E486121" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486121" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108816" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106295"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTT</genome_strand>
        <mrna_strand>GCTGAATATCTCTGAACTTTCTCACTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAGGGTGAATTGGTGTTCGGTGTTGCGCACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCAACCGATAGTACTCGCAGAAAGGGTGGTAAAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAACTTTCGATATCTATTTACATTTGATTTCTGAACACTTTTGAGTTGAGCACTGGTGGTTTCG-AACCACCCTCATTTTGAGTTGGTCAGCTTTTCGAGA-ATATGACCTCTCTTTAATTTGG-TTATGTAGGCTTATTGCTGGATAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E545734" ref_strand="+" ref_description="SGN-E545734 [TUS-68-L19]">
      <seq>tttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="105998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106299" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="721" r_length="279" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="722" polyA_stop="732"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E545734" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAA</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E282245" ref_strand="+" ref_description="SGN-E282245 [cLES-4-E6]">
      <seq>tactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatgcaggctaattgttggataaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108235" stop="105998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107935" g_stop="107845" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="221" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106577" g_stop="106299" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="500" r_length="279" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="501" polyA_stop="512"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E282245" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282245" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107935" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAA</genome_strand>
        <mrna_strand>TACTGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E445241" ref_strand="+" ref_description="SGN-E445241 [cSTA-44-N4]">
      <seq>tttcttcaagctgctgagtatctctgaactttctcacctaccaagctcagccggaaccatgtcgaggagaaagaccagggagcctaaggaaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcgtcgttcaatgatacattcattcatgtcactgatttgtctggaagaagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcctaccgatagtactcgcagaaagggtggttagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcactttttggtttcgaaacccaccttcattttgagttggtcagcttttcgagatagtgaaattctcttaaatttgcttatgtangctgattgttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.883"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="182" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="229" r_length="47" r_score="0.913"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.91"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="315" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="445" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106303" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="719" r_length="274" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E445241" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445241" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106303"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCAC-TATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGG-AAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAG-AGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGG-TAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCAC-TTTTGGTTTCGAAA-CCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGG</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAACTTTCTCACCTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCGTCGTTCAATGATACATTCATT...................................................................................................CATGTCACTGATTTGTCTGGAAGAAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCTACCGATAGTACTCGCAGAAAGGGTGGTTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTTGGTTTCGAAACCCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAATTT-GCTTATGTANGCTGATTGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E339186" ref_strand="+" ref_description="SGN-E339186 [cTOF-6-L24]">
      <seq>ttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaagggtgggttagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactcntgtagttgagcactttttggtttcgaaaccaccttcatttttgagtttgccagcttttcgagatagtttaagttctcttaaatttggtttatgcagggctaattgttgggataaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109124" stop="105998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108824" g_stop="108769" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="176" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="222" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="308" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="438" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106303" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="720" r_length="282" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="722" polyA_stop="738"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E339186" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339186" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108824" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106303"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGG-GTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGG-AAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTC-TGTAGTTGAGCAC-TTTTGGTTTCGAAACCACCTTCA-TTTTGAGTTTGCCAGCTTTTCGAGATAG-TTAAGTTCTCTTAAATTTGGTTTATGCA-GGCTAATTGTTGG</genome_strand>
        <mrna_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAGGGTGGGTTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCNTGTAGTTGAGCACTTTTTGGTTTCGAAACCACCTTCATTTTTGAGTTTGCCAGCTTTTCGAGATAGTTTAAGTTCTCTTAAATTTGGTTTATGCAGGGCTAATTGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E593355" ref_strand="+" ref_description="SGN-E593355 [36583]">
      <seq>ctgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaaattctcttaaatttggtttatgtaggctgtttgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108714" stop="106004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108414" g_stop="108376" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="125" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="255" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106577" g_stop="106304" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="526" r_length="271" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E593355" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E593355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108414" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTG</genome_strand>
        <mrna_strand>CTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAATTTGGTTTATGTAGGCTGTTTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E598303" ref_strand="-" ref_description="SGN-E598303 [73973]">
      <seq>ttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacattttggcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcaatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaaggttgttagaaggggaaggagnctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttggtcgaaaatgcaagccttttcgatatctatttacatttgatttctgacactttgtagttgagcactttttgttttcgaaaccaccttcattttgattggtcagcttttcgagatagtgaaattctcttaaatttggtttaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108903" stop="106020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108603" g_stop="108521" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="129" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="215" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="346" r_length="131" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106313" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="611" r_length="265" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E598303" ref_strand="-">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E598303" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="108603" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGC-ATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTT-GTCGAAAAATGC-AG-C-TTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTT-TTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGC</genome_strand>
        <mrna_strand>TTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTGGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCAATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGTTGTTAGAAGGGGAAGGAGNCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGGTCG-AAAATGCAAGCCTTTTCGATATCTATTTACATTTGATTTCTG-ACACTTTGTAGTTGAGCACTTTTTGTTTTCGAAACCACCTTCATTTTGA-TTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAATTTGGTTTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E345234" ref_strand="+" ref_description="SGN-E345234 [cTOF-13-G16]">
      <seq>tttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcactttttgtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106314" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="706" r_length="264" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E345234" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345234" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGG</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTTGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E602009" ref_strand="+" ref_description="SGN-E602009 [55061]">
      <seq>tcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaaattctcttaaatttggtttatgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109123" stop="106016"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108823" g_stop="108769" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.873"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="175" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="221" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="307" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="437" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106316" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="696" r_length="259" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E602009" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E602009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108823" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCA</genome_strand>
        <mrna_strand>TCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAATTTGGTTTATGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E341266" ref_strand="+" ref_description="SGN-E341266 [cTOE-22-B1]">
      <seq>ttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108865" stop="106018"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108565" g_stop="108521" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="91" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="177" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="307" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106318" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="567" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E341266" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341266" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108565" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATG</genome_strand>
        <mrna_strand>TTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E616203" ref_strand="+" ref_description="SGN-E616203 [66010]">
      <seq>actggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaaattctcttaaatttggtttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108233" stop="106018"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107934" g_stop="107845" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="220" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106577" g_stop="106318" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="477" r_length="257" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E616203" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E616203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107934" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATG</genome_strand>
        <mrna_strand>ACTGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAATTTGGTTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E454938" ref_strand="+" ref_description="SGN-E454938 [cSTS-24-H12]">
      <seq>gtttcttcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaaattctcttaatttgggtttaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="106020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.885"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="443" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106321" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="697" r_length="254" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="698" polyA_stop="710"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E454938" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E454938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTT</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAATTTGGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E593298" ref_strand="+" ref_description="SGN-E593298 [36525]">
      <seq>gtttcttcaagctgctgagtatctctgaactttctcactaccaagctcagccggaaccatgtcgaagagaaagaccaggtagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcctaccgatagtactcgcagaaagggtggtacaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcatttcgagttggtcagcttttcgagatagtgaaattctcttaaatttggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="106021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="443" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106321" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="696" r_length="253" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E593298" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E593298" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTT</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAACTTTCTCACTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGGTAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCTACCGATAGTACTCGCAGAAAGGGTGGTACAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGG-AAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTCGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAATTTGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E348079" ref_strand="+" ref_description="SGN-E348079 [cTOF-31-N11]">
      <seq>tttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcatttttgagtttgccagcttttcgagatagttaagttctcttaaatttggtttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106321" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="701" r_length="259" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="702" polyA_stop="713"/>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E348079" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348079" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGG-AAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCA-TTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTT</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E485846" ref_strand="+" ref_description="SGN-E485846 [cSTE-19-D24]">
      <seq>cttcaagctgctgagtatctctgaactttctcactaccaagctcagccggaaccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcgtcgttcaatgatacattcattcatgtcactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcctaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttggagttgagcacttttggtttcgaaccccaccttcattttgaggtgggcagcttttccgagatagtgaaattcttctaaatttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109125" stop="106024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108825" g_stop="108769" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.912"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="177" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="223" r_length="46" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="309" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="439" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106323" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="693" r_length="254" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E485846" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E485846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108825" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAA-ACCACCTTCATTTTGAGTTTGCCAGCTTTT-CGAGATAGTTAAGTTCTCTTAAATTTGGT</genome_strand>
        <mrna_strand>CTTCAAGCTGCTGAGTATCTCTGAACTTTCTCACTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCGTCGTTCAATGATACATTCATT...................................................................................................CATGTCACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCTACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGGAGTTGAGCACTTTTGGTTTCGAACCCCACCTTCATTTTGAGGTGGGCAGCTTTTCCGAGATAGTGAAATTCTTCTAAATTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E455169" ref_strand="+" ref_description="SGN-E455169 [cSTS-25-D23]">
      <seq>gtttcttcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgaggtggtcagcttttcgagatagtgaaattctcttaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="106028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.885"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="443" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106328" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="690" r_length="247" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E455169" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106328"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAAT</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGGTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E617767" ref_strand="+" ref_description="SGN-E617767 [66621]">
      <seq>gtttcttcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagatagtgaaattctcttaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="106028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.885"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="443" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106328" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="690" r_length="247" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E617767" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E617767" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106328"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAAT</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E406093" ref_strand="+" ref_description="SGN-E406093 [PPI-2-N23]">
      <seq>gtttcttcaagctgctgagtatctctgtactttctcaccaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcaaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactnntgtagttgagcactttttggtttcgaaaccaccttcatttttgaagttggtcagcttttcgagatagtgaaattctcttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="106030"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.869"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.84"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="443" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106330" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="691" r_length="248" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E406093" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E406093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106330"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACT-CTGTAGTTGAGCAC-TTTTGGTTTCGAAACCACCTTCA-TTTTG-AGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAA</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGTACTTTCTCACCACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCA-AAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTNNTGTAGTTGAGCACTTTTTGGTTTCGAAACCACCTTCATTTTTGAAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E456500" ref_strand="+" ref_description="SGN-E456500 [cSTS-29-P15]">
      <seq>gctgctgagtatctctgtacctttctcccaccaagctcaaccggaaccctgtcgaaagagaaagacccgagagccctaaaggaagagactgttaccaccttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacaccatttttgcattcgttcaatgatacattcatttcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgagcactttttggtttcgaaaccaccttcattttgaagttggtcagcttttcgagatagtgaaattctctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109119" stop="106031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108819" g_stop="108769" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.765"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.76"/>
            <acceptor a_prob="1.000" a_score="0.71"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="178" r_length="127" r_score="0.858"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.92"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="225" r_length="47" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="311" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="441" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106331" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="687" r_length="246" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E456500" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E456500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108819" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCTGAGTATCTCTG-AATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCG-AGGAGAAAGACCAGGGAG-CCT-AAGGAAGAGACTGTTA-CA-CTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACA-CATTTTTGCA-TCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAG-CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCAC-TTTTGGTTTCGAAACCACCTTCATTTTG-AGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTA</genome_strand>
        <mrna_strand>GCTGCTGAGTATCTCTGTACCTTTCTC-CCACCAAGCTCAACCGGAACCCTG................................................................................................................................TCGAAAGAGAAAGACCCGAGAGCCCTAAAGGAAGAGACTGTTACCACCTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACCATTTTTGCATTCGTTCAATGATACATTCATT...................................................................................................TCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTTGGTTTCGAAACCACCTTCATTTTGAAGTTGGTCAGCTTTTCGAGATAGTGAAATTCTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E571109" ref_strand="+" ref_description="SGN-E571109 [15799]">
      <seq>gtttcttcaagctgctgagtatctctgaactttctcactaccaagctcagccggaaccatgtcgaagagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcctaccgatagtactcgcagaaagggtggtacaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaatattgtcgtcgaaaatgcagctttcgatatctatttacctttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcatttgagttgtcagcttctcgacgatagtgaaaattctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="106034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="443" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106334" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="683" r_length="240" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E571109" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E571109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGA-GATAGT-TAAGTTCTC</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAACTTTCTCACTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCTACCGATAGTACTCGCAGAAAGGGTGGTACAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGG-AAATATTGTCGTCG-AAAATGCAGCTTTCGATATCTATTTACCTTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCA-TTTGAG-TTGTCAGCTTCTCGACGATAGTGAAAATTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E302620" ref_strand="+" ref_description="SGN-E302620 [cLEX-1-I13]">
      <seq>gagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatgtatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagctttttcgagatagttaagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109113" stop="106036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108813" g_stop="108769" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="165" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="211" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="297" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="427" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106336" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="670" r_length="243" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E302620" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302620" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108813" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGC-TTTTCGAGATAGTTAAGTTC</genome_strand>
        <mrna_strand>GAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATGTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTTCGAGATAGTTAAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E346811" ref_strand="+" ref_description="SGN-E346811 [cTOF-32-M18]">
      <seq>tttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttcgaaaccaccttcattttgagtttgccagcttttcgagataaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106045"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106339" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="681" r_length="239" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E346811" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAG</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E600180" ref_strand="+" ref_description="SGN-E600180 [53185]">
      <seq>cttcaagctgctgagtatctctgaactttctcactaccaagctcagccggaaccatgtcgaagagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcctaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaatattgttgtcgaaaatgcagctttcgatatctatttacactttgatttctgaacactttgtagttgagcacttttggtttcgaaaccaccttcattttgagttggtcagcttttcgagataaaagacaatggcacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109125" stop="106045"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108825" g_stop="108769" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.912"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="177" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="223" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="309" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="439" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106345" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="669" r_length="230" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E600180" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E600180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108825" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACA-TTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATA</genome_strand>
        <mrna_strand>CTTCAAGCTGCTGAGTATCTCTGAACTTTCTCACTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCTACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGG-AAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACACTTTGATTTCTGAACACTTTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTGGTCAGCTTTTCGAGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E345236" ref_strand="+" ref_description="SGN-E345236 [cTOF-13-I10]">
      <seq>tgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcactttttggtttcgaaaccaccttcattttgagtttgccagcttttcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109117" stop="106048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108817" g_stop="108769" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="169" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="215" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="301" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="431" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106348" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="662" r_length="231" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E345236" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345236" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108817" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCAC-TTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAG</genome_strand>
        <mrna_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E328300" ref_strand="+" ref_description="SGN-E328300 [cTOC-21-N16]">
      <seq>ttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcacttttggtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109124" stop="106085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108824" g_stop="108769" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="176" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="222" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="308" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="438" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106385" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="631" r_length="193" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E328300" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328300" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108824" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTC</genome_strand>
        <mrna_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E340828" ref_strand="+" ref_description="SGN-E340828 [cTOF-5-J7]">
      <seq>tgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggttagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttgagcactttttggtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109117" stop="106085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108817" g_stop="108769" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="169" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="215" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="301" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="431" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106385" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="626" r_length="195" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E340828" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108817" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGG-TAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCAC-TTTTGGTTTC</genome_strand>
        <mrna_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTTGGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E459579" ref_strand="+" ref_description="SGN-E459579 [cPRO-28-E12]">
      <seq>ctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgnaaatgcagctttcgatatctatttacatttgatttctgaacactttgtagttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106098"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108815" g_stop="108769" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="0.851"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.85"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="167" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="213" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="299" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="429" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106398" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="606" r_length="177" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E459579" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E459579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108815" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106398"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAG</genome_strand>
        <mrna_strand>CTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-NAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTAGTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E346699" ref_strand="+" ref_description="SGN-E346699 [cTOF-28-D15]">
      <seq>ggtttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattngttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactctgtagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109130" stop="106100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108830" g_stop="108769" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="182" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="228" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="314" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="444" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106400" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="623" r_length="179" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E346699" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346699" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108830" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106400"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATT-GTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTG</genome_strand>
        <mrna_strand>GGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTNGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E340321" ref_strand="+" ref_description="SGN-E340321 [cTOF-2-G10]">
      <seq>gtttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaantattgttgtcgaaaaatgcagctttcgatatctatttacattttgatttctgaacactctgtagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="106100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="443" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106400" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="623" r_length="180" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E340321" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340321" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106400"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAA-TATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACA-TTTGATTTCTGAACACTCTGTAGTTG</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAANTATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTTGATTTCTGAACACTCTGTAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E560437" ref_strand="+" ref_description="SGN-E560437 [20091]">
      <seq>cactaccaagctcagccggaaccatgtcgaagagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggagggtgaattggtgttcggtgttgcgcacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattccaaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttctgaacactttgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108794" g_stop="108769" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="0.846"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="146" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="192" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="278" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="408" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106404" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="579" r_length="171" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E560437" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108794" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTA</genome_strand>
        <mrna_strand>CACTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAGGGTGAATTGGTGTTCGGTGTTGCGCACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCAACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTTTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E325907" ref_strand="+" ref_description="SGN-E325907 [cTOC-12-A16]">
      <seq>tttcttcaagctgctgagtatctctgaattttggcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcacggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106407" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="613" r_length="171" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E325907" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325907" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCT</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTGGCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E303491" ref_strand="+" ref_description="SGN-E303491 [cLEX-2-M10]">
      <seq>tttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacactct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106407" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="613" r_length="171" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E303491" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303491" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCT</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E570479" ref_strand="+" ref_description="SGN-E570479 [15070]">
      <seq>ccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggccatgaaaattggacgtatagaggatgttactccaattgtccagccgatagtactcgcagaaagggtggtaaaaggggaaggaggctgtgaaaactgttttcttttctgcaagcatgttgcaagttggaggaaaatatgttgtcgaaaatgcagtttccgatatctatttacatttgatttcttgaacacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106106"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108789" g_stop="108769" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="0.762"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="141" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="187" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="273" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="404" r_length="131" r_score="0.977"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106407" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="576" r_length="172" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E570479" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E570479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108789" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGG-CATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATT-CCCA-CCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGC-AGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTC-TGAACACTCT</genome_strand>
        <mrna_strand>CCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTGTCCAGCCGATAGTACTCGCAGAAAGGGTGGTAAAAGGGGAAGGAGGCTGTGAAAACTGTTT-TCTTTTCTGCAAGCATGTTGCAAGTTGGAGGAAAATA-TGTTGTCG-AAAATGCAGTTTCCGATATCTATTTACATTTGATTTCTTGAACACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E290481" ref_strand="+" ref_description="SGN-E290481 [cLES-20-P8]">
      <seq>tgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcaacatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttctgaacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109104" stop="106110"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108804" g_stop="108769" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="156" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="202" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="288" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="418" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106410" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="586" r_length="168" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E290481" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108804" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106410"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACAC</genome_strand>
        <mrna_strand>TGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAACATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E348010" ref_strand="+" ref_description="SGN-E348010 [cTOF-31-I7]">
      <seq>gtcgaggagacaagaccagggagccctaaggaaagagactgttaccacctggaccagcaaccgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatggatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgaccagagatgagtcttctccgtatgcctgctatgcttgcagctcaagatgtgtcacaagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcntttctgcagcatngtgcaaattggaggaaaataattgntgtcgaaaaatgcagctttcgatatctatttacattttgatttctgaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108641" g_stop="108521" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.893"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="173" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="262" r_length="89" r_score="0.919"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="392" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106411" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="561" r_length="169" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E348010" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348010" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108641" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106411"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGAGGAGA-AAGACCAGGGAG-CCTAAGG-AAGAGACTGTTA-CACTTGGACCAGCAA-CGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAAT-GATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGA-CAGAGATGAGTCTTCTCCGTATG-CTGCTATGCTTGCAGCTCAGGATGTGTCAC-AGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAAT-ATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACA-TTTGATTTCTGAACA</genome_strand>
        <mrna_strand>GTCGAGGAGACAAGACCAGGGAGCCCTAAGGAAAGAGACTGTTACCACCTGGACCAGCAACCGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACCAGAGATGAGTCTTCTCCGTATGCCTGCTATGCTTGCAGCTCAAGATGTGTCACAAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCNTTTCTGCAGCATNGTGCAAATTGGAGGAAAATAATTGNTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTTGATTTCTGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E439182" ref_strand="+" ref_description="SGN-E439182 [cSTA-11-A14]">
      <seq>tttcttcaagctgctgagtatctctgaactttctcactaccaagctcagccggaaccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcgtcgttcaatgatacattcattcatgtcactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcctaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgatatctatttacatttgatttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106116"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106416" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="601" r_length="159" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E439182" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E439182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106416"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCT</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAACTTTCTCACTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCGTCGTTCAATGATACATTCATT...................................................................................................CATGTCACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCTACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATATCTATTTACATTTGATTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E326125" ref_strand="+" ref_description="SGN-E326125 [cTOC-16-H16]">
      <seq>ttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttgatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109124" stop="106117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108824" g_stop="108769" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="176" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="222" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="308" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="438" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106417" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="599" r_length="161" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E326125" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108824" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTC</genome_strand>
        <mrna_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E289564" ref_strand="+" ref_description="SGN-E289564 [cLET-3-J18]">
      <seq>aacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcagcatgttgcaaattggaggaaaatattgttgtcgaaaaatgcagctttcgatatctatttacatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108887" stop="106122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108587" g_stop="108521" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="113" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="199" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="329" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106422" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="485" r_length="156" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E289564" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289564" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108587" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTG</genome_strand>
        <mrna_strand>AACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E561148" ref_strand="+" ref_description="SGN-E561148 [17094]">
      <seq>tcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaaaactgtttcttttctgcagcatgttgcaagttggaggaaaatattgttgtcgaaaatgcagctttcgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109123" stop="106136"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108823" g_stop="108769" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.873"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="175" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="221" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="307" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="437" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106436" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="576" r_length="139" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E561148" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561148" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108823" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106436"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATA</genome_strand>
        <mrna_strand>TCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAAACT-GTT-TCTTTTCTGCAGCATGTTGCAAGTTGGAGGAAAATATTGTTGTCG-AAAATGCAGCTTTCGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E282960" ref_strand="+" ref_description="SGN-E282960 [cLER-17-A14]">
      <seq>gaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttcttttttctgcagcatgttgcaaattggaggaaaatattgttgtctaaaaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109103" stop="106147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108803" g_stop="108769" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="155" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="201" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="287" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="417" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106447" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="548" r_length="131" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E282960" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108803" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGC</genome_strand>
        <mrna_strand>GAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTTTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCTAAAAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E311983" ref_strand="+" ref_description="SGN-E311983 [cTOA-16-C5]">
      <seq>tgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggggcccagtccgcttcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtgggagaaggggaaggaggcttggaagactctttctcttttctgcagcatgttgcaaattggaggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109117" stop="106166"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108817" g_stop="108769" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="169" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="215" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="301" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="432" r_length="131" r_score="0.977"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106466" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="544" r_length="112" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E311983" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311983" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108817" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGC-TCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAA</genome_strand>
        <mrna_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGGGCCCAGTCCGCTTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGGAGAAGGGGAAGGAGGCTTGGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E347697" ref_strand="+" ref_description="SGN-E347697 [cTOF-26-G3]">
      <seq>tttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagaaaaactatggttcgcattactggtggaatgaaagtgaaaggttacagagataaatcttctccgtatgctgctatgcttgcagctcaagatgtgtcacaccgatgcaagggacttggaattaatggtcttcacattaagctccgagctacaggaggcgacaagaccacgactcctggtcctggtgcccactccgctcttatagcattggctcgttctggcgtgaaaaatggacgcatagaggatgttactccaattaccaccgatagtactcgcagaaagagtggtataaggagaaggaggctgttaaaactatttctcttttttgcagcatgttgcaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="0.907"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="0.923"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.88"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106475" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="545" r_length="103" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E347697" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347697" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATT</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAAAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAAGTGAAAGGTTACAGAGATAAATCTTCTCCGTATGCTGCTATGCTTGCAGCTCAAGATGTGTCACACCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTTGGAATTAATGGTCTTCACATTAAGCTCCGAGCTACAGGAGGCGACAAGACCACGACTCCTGGTCCTGGTGCCCACTCCGCTCTTATAGCATTGGCTCGTTCTGGCGTGAAAAATGGACGCATAG...............................................................................................................................AGGATGTTACTCCAATTACCACCGATAGTACTCGCAGAAAGAGTGGTATAAGGAGAAGGAGGCTGTTAAAACTATTTCTCTTTTTTGCAGCATGTTGCAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E325916" ref_strand="+" ref_description="SGN-E325916 [cTOC-12-E18]">
      <seq>tttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaagctgtgaagactctttctcttttctgcagcatgttgcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106477" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="543" r_length="101" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E325916" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325916" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAA</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAAGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E304843" ref_strand="+" ref_description="SGN-E304843 [cLEX-10-N4]">
      <seq>ttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgggaaaactctttctcttttctgcagcatgttgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109127" stop="106178"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108827" g_stop="108769" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="179" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="225" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="311" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="441" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106478" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="541" r_length="100" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E304843" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108827" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106478"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAA</genome_strand>
        <mrna_strand>TTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGGGAAAACTCTTTCTCTTTTCTGCAGCATGTTGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E310002" ref_strand="+" ref_description="SGN-E310002 [cTOA-4-G11]">
      <seq>tgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcatgatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacatgaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggtggtagaaggggaaggaggctgtgaagactctttctcttttctgcatcatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109117" stop="106181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108817" g_stop="108769" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="169" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="215" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="301" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="431" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106481" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="528" r_length="97" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E310002" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108817" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106481"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTG</genome_strand>
        <mrna_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCATGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACATGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCATCATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E402098" ref_strand="+" ref_description="SGN-E402098 [PPC-6-M2]">
      <seq>gctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcccaaaaaaggtggtacaaggggaaagaagctgtgaaaaactgtttctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109119" stop="106196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108819" g_stop="108769" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.863"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="171" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="217" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="304" r_length="87" r_score="0.965"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="434" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106494" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="517" r_length="83" r_score="0.869"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E402098" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E402098" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108819" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106494"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGC-AAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTT</genome_strand>
        <mrna_strand>GCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCCCAAAAAAGGTGGTACAAGGGGAAAGAAGCTGTGAA-AAACTGTTTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E564789" ref_strand="+" ref_description="SGN-E564789 [3038]">
      <seq>gtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaagaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttacagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgataagtactcgcagaaagggtggtaaaggggaaagaggctgtgaaaactgtttcttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108803" g_stop="108769" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.800"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="154" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="200" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="286" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="416" r_length="130" r_score="0.985"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106494" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="500" r_length="84" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E564789" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E564789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108803" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106494"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGAT-AGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTT</genome_strand>
        <mrna_strand>GTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAA-GAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTACAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAAGTACTCGCAGAAAGGGTGGTA-AAGGGGAAAGAGGCTGTGAAAACTGTTTCTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E293906" ref_strand="+" ref_description="SGN-E293906 [cLET-13-C2]">
      <seq>aacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggctcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctatggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactctcagaaagggtggtagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108887" stop="106226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108587" g_stop="108521" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="113" r_length="46" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="199" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="329" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106526" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="381" r_length="52" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E293906" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293906" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108587" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAG</genome_strand>
        <mrna_strand>AACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGCTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTATGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCTCAGAAAGGGTGGTAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E567774" ref_strand="+" ref_description="SGN-E567774 [11952]">
      <seq>ggtttcttcaagctgctgagtatctctgaactttctcactaacaagctcagccggaaccatgtccgaaggagaaagaccaggggagcctaaggaaggagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcggttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacaggagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcgaacaagaccaagactcctgggtcctggtgcccagtccgctcttagcagctttggctcgttctggcatgaaaatttggacgtatagaggatgttactccaattcctaccgatagtactcgcagaaagggtggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109130" stop="106231"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108830" g_stop="108769" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.919"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="187" r_length="125" r_score="0.917"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="233" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="320" r_length="87" r_score="0.965"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="454" r_length="134" r_score="0.938"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.92"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106531" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="501" r_length="47" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E567774" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567774" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108830" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGT-CG-AGGAGAAAGACCA-GGGAGCCTAAGGAAG-AGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATC-GTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACA-GAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGC-AACAAGACCAAGACTCCT-GGTCCTGGTGCCCAGTCCGCTCTTAG-AGCTTTGGCTCGTTCTGGCATGAAAA-TTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGT</genome_strand>
        <mrna_strand>GGTTTCTTCAAGCTGCTGAGTATCTCTGAACTTTCTCACTAACAAGCTCAGCCGGAACCATG................................................................................................................................TCCGAAGGAGAAAGACCAGGGGAGCCTAAGGAAGGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCGAACAAGACCAAGACTCCTGGGTCCTGGTGCCCAGTCCGCTCTTAGCAGCTTTGGCTCGTTCTGGCATGAAAATTTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCTACCGATAGTACTCGCAGAAAGGGTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E315007" ref_strand="+" ref_description="SGN-E315007 [cTOB-4-C4]">
      <seq>tttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaagatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcagaaagggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="442" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106534" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="486" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E315007" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315007" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGT</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAAGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E460152" ref_strand="+" ref_description="SGN-E460152 [cPRO-30-G21]">
      <seq>gtttcttcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcgaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaatttcccaccgatagtactcccaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="106239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.885"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="443" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106539" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="483" r_length="40" r_score="0.897"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E460152" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E460152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAA-TTCCCACCGATAGTACTCGCAGAA</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTTCCCACCGATAGTACTCCCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E445848" ref_strand="+" ref_description="SGN-E445848 [cSTA-19-E1]">
      <seq>gtttcttcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="106241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.885"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="443" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106541" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="480" r_length="37" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E445848" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAG</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E341349" ref_strand="+" ref_description="SGN-E341349 [cTOE-22-N18]">
      <seq>acgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggagcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108886" stop="106241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108586" g_stop="108521" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="112" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="198" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="328" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106577" g_stop="106541" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="365" r_length="37" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E341349" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>365</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108586" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGCAG</genome_strand>
        <mrna_strand>ACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGAGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E241611" ref_strand="+" ref_description="SGN-E241611 [cLED-36-O5]">
      <seq>ttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109124" stop="106243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108824" g_stop="108769" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="176" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="222" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="308" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="438" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106543" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="473" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E241611" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241611" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108824" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGC</genome_strand>
        <mrna_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E284776" ref_strand="+" ref_description="SGN-E284776 [cLES-3-J15]">
      <seq>ttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109124" stop="106243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108824" g_stop="108769" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="176" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="222" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="308" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="438" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106543" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="473" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E284776" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284776" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108824" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGC</genome_strand>
        <mrna_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E318951" ref_strand="+" ref_description="SGN-E318951 [cTOB-14-B15]">
      <seq>tgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaattcccaccgatagtactcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109117" stop="106243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108817" g_stop="108769" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="169" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="215" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="301" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="431" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106543" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="466" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E318951" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318951" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108817" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCCCACCGATAGTACTCGC</genome_strand>
        <mrna_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCCCACCGATAGTACTCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E567788" ref_strand="+" ref_description="SGN-E567788 [11968]">
      <seq>ggttcttcaaggctgctgagttatctctgaactttctcactaccaagctcaagccggaaccatgtcgaagaagcacagaccatggagcctaaggaagagactgttacactttggaaccagcaacgagggaacggtgaattggtgtccggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaacgctgacagagatgagtcttctccatatgctgctatgcttgcaagctccaggatgtgtcacagcgatgcaaggaaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttaaagctttggctcgttctggcatgaacattggacgtatagaggatgttactcccaaattccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="0.803"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.81"/>
            <acceptor a_prob="1.000" a_score="0.81"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="189" r_length="125" r_score="0.883"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="235" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="323" r_length="88" r_score="0.930"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="454" r_length="131" r_score="0.969"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106557" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="477" r_length="23" r_score="0.762"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E567788" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567788" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAA-GCTGCTGAGT-ATCTCTGAATTTTCTCACTATCAAGCTC-AGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCG-AGGAG-AAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTT-GGA-CCAGCAACGAGGGAA-GGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGC-AGCT-CAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGG-AACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACT-CC-AATTCCCA</genome_strand>
        <mrna_strand>GGTTCTTCAAGGCTGCTGAGTTATCTCTGAACTTTCTCACTACCAAGCTCAAGCCGGAACCATG................................................................................................................................TCGAAGAAGCACAGACCATGGAGCCTAAGGAAGAGACTGTTACACTTTGGAACCAGCAACGAGGGAACGGTGAATTGGTGTCCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAACGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAAGCTCCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAAAGCTTTGGCTCGTTCTGGCATGAACATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCCAAATTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E564711" ref_strand="+" ref_description="SGN-E564711 [2960]">
      <seq>tgaatatctctgaactttctcactaccaagctcagccggaaccatgtcgaagagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggagggtgaattggtgttcggtgttgcgcacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaaggactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattgggacgtatagaggatgttactccaattcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106259"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108814" g_stop="108769" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="0.870"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.87"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="166" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="212" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="298" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="430" r_length="132" r_score="0.969"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106559" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="449" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E564711" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E564711" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108814" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106559"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAA-GACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATT-GGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATTCC</genome_strand>
        <mrna_strand>TGAATATCTCTGAACTTTCTCACTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAGGGTGAATTGGTGTTCGGTGTTGCGCACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E313842" ref_strand="+" ref_description="SGN-E313842 [cTOA-17-K22]">
      <seq>aattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgtatgcacacattttagcatcgttcaatgatacattcattcacgttactgatttgtctggaggagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgaatgctgctgagcttgcagctcaggatgtgtcacatcgatgcagggaactcggagttaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggacctggtgcccagaccgctctgagagctttggctcgttctggcatgaaaattggacgtatagaggatgttactccaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109102" stop="106394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108802" g_stop="108769" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="155" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="201" r_length="46" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="287" r_length="86" r_score="0.942"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="417" r_length="130" r_score="0.962"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106561" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="434" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E313842" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313842" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108802" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106561"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGT-TGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAATT</genome_strand>
        <mrna_strand>AATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTATGCACACATTTTAGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAGGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGAATGCTGCTGAGCTTGCAGCTCAGGATGTGTCACATCGATGCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTCGGAGTTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGACCTGGTGCCCAGACCGCTCTGAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E312789" ref_strand="+" ref_description="SGN-E312789 [cTOA-8-H24]">
      <seq>tttcttcaagctgctgagtatctctgaattggctcactgtgaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcatgatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccggtcttagagctttggctcgtttctggcatgaaaattggacgtatagaggatgttactccaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="443" r_length="131" r_score="0.977"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106562" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="459" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E312789" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106562"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCG-TTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTACTCCAAT</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTGGCTCACTGTGAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCATGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGGTCTTAGAGCTTTGGCTCGTTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTACTCCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E336882" ref_strand="+" ref_description="SGN-E336882 [cTOE-5-D1]">
      <seq>ttcaagctgctgagtatctctgaattttgtcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccaccagtaaagcgatgtgcattctacatctgagtttcagacattactgcatcggcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109124" stop="106397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108824" g_stop="108769" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="175" r_length="119" r_score="0.817"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.74"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="221" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="307" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="437" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106568" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="447" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E336882" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336882" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108824" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106568"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTAC</genome_strand>
        <mrna_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTGTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCACCAGTAAAGCGATGTGCATTCTACATCTGAGTTTCAGACATTACTGCATCG-GCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E296899" ref_strand="+" ref_description="SGN-E296899 [cLET-26-K23]">
      <seq>tcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaagatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgtatagaggatgttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109123" stop="106397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108823" g_stop="108769" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="175" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="221" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="307" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="437" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106568" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="447" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E296899" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108823" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106705"/>
          <exon e_start="106577" e_stop="106568"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAGGTACATAAGCTTTTCTCTCTTGCATCAGTATCGTATCATGGCAAAGTTCTCGTAATATGCTCCATATAATCTGTTGTATCATTGTTATGTCATCACTTTTAAGTAATTCTTCCTATATATTTTGCAGAGGATGTTAC</genome_strand>
        <mrna_strand>TCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAAGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG...............................................................................................................................AGGATGTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E338890" ref_strand="+" ref_description="SGN-E338890 [cTOE-21-B11]">
      <seq>cgagggtttctttaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtacgctcttagagctttggctcgttctggcatgaaaattggacgtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109132" stop="106406"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108834" g_stop="108769" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="186" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="232" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="318" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106706" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="447" r_length="129" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E338890" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108834" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106706"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATA</genome_strand>
        <mrna_strand>CGAGGGTTTCTTTAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTACGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E312500" ref_strand="+" ref_description="SGN-E312500 [cLEZ-20-J7]">
      <seq>cttcaagctggtgagtatctctgaatttggtgactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactagtgcacttggaccagcaactatggaaggtgaattggtgttcggagttgcacacatttttgcataggtcaatgatacattcattcacgttactgatttggctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgcatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaaaattggacgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109125" stop="106408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108825" g_stop="108769" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.930"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="177" r_length="120" r_score="0.933"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="223" r_length="46" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="309" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106708" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="436" r_length="127" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E312500" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108825" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTA</genome_strand>
        <mrna_strand>CTTCAAGCTGGTGAGTATCTCTGAATTTGGTGACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTAGTGCACTTGGACCAGCAACTATGGAAGGTGAATTGGTGTTCGGAGTTGCACACATTTTTGCATAGGTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGGCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGCATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E565887" ref_strand="+" ref_description="SGN-E565887 [4326]">
      <seq>ctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactccctggtcctggtgcccagtccgctcttagagctttggctcgttctggcatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108807" g_stop="108769" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="0.821"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="159" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="205" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="291" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106719" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="408" r_length="117" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E565887" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E565887" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108807" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACT-CCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAA</genome_strand>
        <mrna_strand>CTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E482151" ref_strand="+" ref_description="SGN-E482151 [cSTD-21-I11]">
      <seq>gtctccatatctctgaactttctcactaccaagctcagccggaaccatgtcgaagagaaagaccagggagcctaaggaagagactgttacacttggaccaccaacgagggagggtgaattggtgttcggtgttgcgcacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaacagaaactatgggtcgcattactggtggaatgaaggtgaaggctgacagagatgaggcttctccatatgctgctatgcttgcatctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccagtccgctcttagagctttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106434"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108817" g_stop="108769" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="0.796"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.80"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="169" r_length="120" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="215" r_length="46" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="301" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106736" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="400" r_length="99" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E482151" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482151" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108817" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTG</genome_strand>
        <mrna_strand>GTCTCCATATCTCTGAACTTTCTCACTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCACCAACGAGGGAGGGTGAATTGGTGTTCGGTGTTGCGCACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAACAGAAACTATGGGTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGGCTTCTCCATATGCTGCTATGCTTGCATCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E307165" ref_strand="+" ref_description="SGN-E307165 [cLEY-15-E22]">
      <seq>atctctgaatttgctcactatcaagggcaactgtagccatgtcaaggagaaagaccagagagcctaaggaagagactgtcacacttggaccagcaacaagggaaggtgaattggtgttcggtgttgcacacatttttgcatccttcaatgatacattcattcacgttactgattagtctggaagagaaactatggttcgcattactggtggaatgaaagtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactcctggtcctggtgcccaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108809" g_stop="108769" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="0.878"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.88"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="161" r_length="120" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="207" r_length="46" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="293" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106753" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="375" r_length="82" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E307165" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>375</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108809" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGT</genome_strand>
        <mrna_strand>ATCTCTGAATTTGCTCACTATCAAGGGCAACTGTAGCCATG................................................................................................................................TCAAGGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTCACACTTGGACCAGCAACAAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCCTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTAGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAAGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E562446" ref_strand="+" ref_description="SGN-E562446 [886]">
      <seq>tggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctagctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaataaatgctcttcacattaagctccgagctacaggaggcaacaagaccaagactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108236" stop="106471"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="102" r_length="87" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106834" g_stop="106771" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="166" r_length="64" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E562446" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>150</cumulative_length_of_scored_exons>
        <coverage percentage="0.904" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E562446" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106771"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCT-GCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTC</genome_strand>
        <mrna_strand>GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTAGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E336598" ref_strand="+" ref_description="SGN-E336598 [cTOE-4-K22]">
      <seq>tttcttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactntacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctacagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="179" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="225" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="311" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106791" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="355" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E336598" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGG</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACT-NTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E327157" ref_strand="+" ref_description="SGN-E327157 [cTOC-18-D5]">
      <seq>ctcgtgccgcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaagggacttggaattaatgctcttcacattaagctccgagctaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109127" stop="106493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108831" g_stop="108769" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="183" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="229" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="315" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106793" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="357" r_length="42" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E327157" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108831" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACA</genome_strand>
        <mrna_strand>CTCGTGCCGCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E437092" ref_strand="+" ref_description="SGN-E437092 [cSTA-2-L23]">
      <seq>tttcttcaagctgctgagtatctctgaactttctcactaccaagctcagccggaaccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcgtcgttcaatgatacattcattcatgtcactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109128" stop="106493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108828" g_stop="108769" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="180" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="226" r_length="46" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="312" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106793" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="354" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E437092" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E437092" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108828" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACA</genome_strand>
        <mrna_strand>TTTCTTCAAGCTGCTGAGTATCTCTGAACTTTCTCACTACCAAGCTCAGCCGGAACCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCGTCGTTCAATGATACATTCATT...................................................................................................CATGTCACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E445249" ref_strand="+" ref_description="SGN-E445249 [cSTA-44-N14]">
      <seq>tcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcgtcgttcaatgatacattcattcatgtcactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccatatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagctaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108940" stop="106493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="166" r_length="46" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="252" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106793" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="294" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E445249" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>294</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACA</genome_strand>
        <mrna_strand>TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCGTCGTTCAATGATACATTCATT...................................................................................................CATGTCACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E341260" ref_strand="+" ref_description="SGN-E341260 [cTOE-22-O2]">
      <seq>agaaagaccagggagcctaaggaagaaactgttacacttggaccagcaacgagggaaggtgaattggtgttcggagttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaagtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcatgatgtgtcacagcgatgcaaggaactttgaattaatgctcttcacattaagctccgagctaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108934" stop="106493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108634" g_stop="108521" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="160" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="246" r_length="86" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106834" g_stop="106793" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="288" r_length="42" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E341260" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>288</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341260" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108634" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACA</genome_strand>
        <mrna_strand>AGAAAGACCAGGGAGCCTAAGGAAGAAACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGAGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAAGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCATGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTTGAATTAATGCTCTTCACATTAAGCTCCGAGCTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E564348" ref_strand="+" ref_description="SGN-E564348 [2597]">
      <seq>gtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgccattactggtggaatgaacgtgaaagctgacagagatgagtcttctccatatgctgctatgcttgcagctcacgatgtgtcacagcgatgccaggaaccttggaataaatgctcttcacattaagctccgagctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108941" stop="106494"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108803" g_stop="108769" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.800"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="155" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="202" r_length="47" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="288" r_length="86" r_score="0.942"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106794" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="330" r_length="42" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E564348" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>328</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E564348" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108803" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106794"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCG-CATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAA-CTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTAC</genome_strand>
        <mrna_strand>GTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAACGTGAAAGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCACGATGTGTCACAGCGATGCCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCTTGGAATAAATGCTCTTCACATTAAGCTCCGAGCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E289778" ref_strand="+" ref_description="SGN-E289778 [cLET-9-C12]">
      <seq>ctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcaggatgtgtcacagcgatgcaaggaacttggaattaatgctcttcacattaagctccgagcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109118" stop="106495"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108818" g_stop="108769" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="170" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="216" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="302" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106795" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="342" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E289778" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>342</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108818" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106795"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTA</genome_strand>
        <mrna_strand>CTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E279237" ref_strand="+" ref_description="SGN-E279237 [cLEL-4-M3]">
      <seq>gcacgaggctgagtatctctgatttttctcactatcaagctcagctggagccatgtcgaggagaaagaccccgcagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaggtgaaggctgacagagatgagtcttctccgtatgctgctatgcttgcagctcatgatgtgtcacagcgatgcaaggaacttggaattaatgctcttaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109122" stop="106509"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108823" g_stop="108769" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.891"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="175" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="221" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="307" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106834" g_stop="106809" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="333" r_length="26" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E279237" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>333</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279237" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108823" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
          <exon e_start="106834" e_stop="106809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAGGTAGTGTCTTGTTTGGTTCTGATAAAGTCAATTTCCTTAATTCTACTTAATTGTTAGTTAAGCTCATCAGATATAAAGTTGGTCTAGTTCAGGTCTATATCAATATAAACCATTTATGTATGAACGAAAAAAATGAAGACTTTTTGCCTATATGGTACTGTTCACAGAGATTAATATTAGATTTTATTTCTGAAGAAAGTCACTATACTAATTTCACTGGATATTGATGTAATGTTTAGTTCTCCTGGATGTTGCATTCCATGTTGGTGCAGGGATTTATCCTTTCTTGCATTGACCAGTAATATAGGTGCCAAATTACATAGCTCTTCTATAAGTGTAGAGTGTTGCTTTGTAGATAAAATTTAGCAGTTTCGAAATTTAAGACCTTTTGGATCTTCTGATGCCTCCCTTTTCTGAATGTGTGCTAAAGCCAATAATTCTGCCGACTAGACATTCGAAGATCTTATAATGTACATGATGGCCTTTACTCCTATCTATGTTTCTTGCTAGGATGTAGATGGTCTATAAGATTGTTTTTGGGTTCCATATGCCTGATGCATCTTACTTTTGCTTAACAATAAAAAATTTGTGTATAATTGATTGGAATAAATGCCATTCCTTCGAACATATTGTAGAGACCCGTAGATTTTATGTCACCGGTTTGGATCTATTAGGCTTTGTTATGGAAGATTCCATTCTGAAGTGATGTGTGCACCTTCAATTTTCGGACACTTTTACCACTAACAGTTGCATAATCGCTGGTGGTGCTTGAACTATGGAAAAATGTGTGCTTCAGATTCTATTTAAGCGTCAAGGTTTCGGAATGGTGGTCAGAATCATTGTTAATGGGTTCCATGCTATGCCATTTATTCAGAGTCTAAATATAGCTACACTATATTTAAGACTCAAGCTCGGATACGTCCATCTTTATCCATCTAGTCTGATGTCACTAGGTCTCGTCATCACTTGTTAATCTTTTAAAATATTATTTATGAACTTTTGATTTACAGGAACTTGGAATTAATGCTCTTCACAT</genome_strand>
        <mrna_strand>GCACGAGGCTGAGTATCTCTGATTTTTCTCACTATCAAGCTCAGCTGGAGCCATG................................................................................................................................TCGAGGAGAAAGACCCCGCAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCATGATGTGTCACAGCGATGCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGGAATTAATGCTCTTAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E464617" ref_strand="+" ref_description="SGN-E464617 [cPRO-18-H1]">
      <seq>gtttcttcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaagagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtctggaagagaaactatggttcgcattactggtggaatgaaagtgaaagctgacagagatgagtcttctccatatgctgctatgcttgcagctcacgatgtgtcacagcgatgcaaggaacttggaataaatgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109129" stop="107540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108829" g_stop="108769" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.885"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="181" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="227" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107930" g_stop="107845" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="313" r_length="86" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E464617" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>313</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108829" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="107930" e_stop="107845"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCAGTATAATTGTTGCTTTCGATGCGAACATCGGTTTATGTATAAATGTAGATGCCTTTCTTCCAGGATGCTAATTCTGTTGTTGTTATCCCTATTGGATAGACATATATTTACTTTTTCAATATAGATGAATGTAAGTGGTAGGAAATGTAGAGCATCTATAGTTTTAGGGAAATCAAGAATGTAGAGCATCTATAGTTTTAGGGAATCCTTGATATGGTTGAGGCAGCAAATTATTGGTATTAGAATATAATCCTTCTAGGAAGAAGGAAAATGGGTATAGAGGTTCCGTCTAGTGTGGAGTTTAATCTTAGTTGTTGATGTCGTAATGGTATGGAGAAGCCTTTCATCTCAAATTGTTATACATTTTTGTTGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG</genome_strand>
        <mrna_strand>GTTTCTTCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAAGAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGAAAGTGAAAGCTGACAGAGATGAGTCTTCTCCATATGCTGCTATGCTTGCAGCTCACGATGTGTCACAGCGATGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E445242" ref_strand="+" ref_description="SGN-E445242 [cSTA-44-N4]">
      <seq>gagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcgtcgttcaatgatacattcattcatgtcactgatttgtctggaagagaaactatggttcgcattactggtggaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108935" stop="108074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108635" g_stop="108521" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108376" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="161" r_length="46" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108375" i_stop="108315" i_length="61">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.664" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108314" g_stop="108306" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="170" r_length="9" r_score="0.556"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E445242" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>170</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108635" e_stop="108521"/>
          <exon e_start="108421" e_stop="108376"/>
          <exon e_start="108314" e_stop="108306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTGGTATGCCTTATAGAAACAATTGTTTTATACTTTTGACTGTATCCTTGTAGTTACTGATTAGCTGGTAGCA</genome_strand>
        <mrna_strand>GAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCGTCGTTCAATGATACATTCATT...................................................................................................CATGTCACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG.............................................................GTGGAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E399836" ref_strand="+" ref_description="SGN-E399836 [cSTC-2-N15]">
      <seq>tcaagctgctgagtatctctgtactttctcactaccaagctcaaccggaaccatgtcgaatagaaagaccagagagcctaaggaagagactgttacacttggaccagcaacgatggaaggtgaatcggtgttcggtgctgcacactttttgcatcaatcaatgatacattcattcacgctactgatttgcttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109123" stop="108221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108823" g_stop="108769" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.873"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="174" r_length="119" r_score="0.925"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.90"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108401" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="195" r_length="21" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E399836" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>196</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E399836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108823" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTCTGGA</genome_strand>
        <mrna_strand>TCAAGCTGCTGAGTATCTCTGTACTTTCTCACTACCAAGCTCAACCGGAACCATG................................................................................................................................TCGAATAGAAAGACCAGAGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGATGGAAGGTGAATCGGTGTTCGGTGCTGCACAC-TTTTTGCATCAATCAATGATACATTCATT...................................................................................................CACGCTACTGATTTGCTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E337832" ref_strand="+" ref_description="SGN-E337832 [cTOE-14-A13]">
      <seq>tttgattaatttgaattgaaaaactgtatgttcgatgaaattgtttgtttgtagtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccatcaacgacggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgatacattcattcacgttactgatttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="108994" stop="108221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108694" g_stop="108521" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108421" g_stop="108405" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="191" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E337832" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>191</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108694" e_stop="108521"/>
          <exon e_start="108421" e_stop="108405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAGCACGTTACTGATTTGTC</genome_strand>
        <mrna_strand>TTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCATCAACGACGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT...................................................................................................CACGTTACTGATTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E327322" ref_strand="+" ref_description="SGN-E327322 [cTOC-19-F4]">
      <seq>ttcaagctgctgagtatctctgaattttctcactatcaagctcagctgaagccatgtcgaggagaaagaccagggagcctaaggaagagactgttacacttggaccagcaacgagggaaggtgaattggtgttcggtgttgcacacatttttgcatcgttcaatgataactttcatttcacgttactgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="109124" stop="108208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108824" g_stop="108769" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108640" g_stop="108521" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="177" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99">
            <donor d_prob="0.008" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108421" g_stop="108408" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="192" r_length="15" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E327322" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>190</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108824" e_stop="108769"/>
          <exon e_start="108640" e_stop="108521"/>
          <exon e_start="108421" e_stop="108408"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATGGTACTATTTCTCGTGCTGAAATTTCCATTTCATTACTGAAGATTTGCTGTTTATGTCGATTATATTTAGTTTGATTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGAT-ACATTCATTGTGAGTGAGTTATGGTTTTTGAAAATTTGATGTAGAAATGTAGATTTGGCTTTGTTATTTGTGTGTTTTACTGATTCTTAGTGTATGTGATGAATGCAG-CACGTTACTGATTT</genome_strand>
        <mrna_strand>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG................................................................................................................................TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATAACTTTCATT...................................................................................................TCACGTTACTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E238878" ref_strand="-" ref_description="SGN-E238878 [cLEL-9-J22]">
      <seq>agtggagtcatctcagccctcatgctaatagaagctaacaatgtagtccaacaagagaagaaaaagtgcaaatattgctatggaagtgggtacttggcatgtgcacgatgttcagcaagcggtaaatgcctctatactgaaccaatttcagtgaatggttcttatcaatcgttgcgtgcaccaactcttaaaagatgtgcgaattgctccgggactggaaaggtaatgtgccctacatgtctgtgtactgggatggtgatggcaagtgaacatgaccttcgaatagatccatttgattaagtacaaattctcattttgtaacttatattcatacaaaaaataattggtcattttggttttgttataagcatagttattatatatagaatatcctttggttatgaagaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="111593" stop="1843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111293" g_stop="111205" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111204" i_stop="111061" i_length="144">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111060" g_stop="110927" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="222" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110926" i_stop="110513" i_length="414">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110512" g_stop="110329" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="406" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110328" i_stop="109732" i_length="597">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="109731" g_stop="109715" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="423" r_length="17" r_score="0.647"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E238878" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238878" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="111293" e_stop="111205"/>
          <exon e_start="111060" e_stop="110927"/>
          <exon e_start="110512" e_stop="110329"/>
          <exon e_start="109731" e_stop="109715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGGGAGTCATCTCAGCCCTCATGCTAATAGAAGCTAACAATGTAGTCCAACAAGAGAAGAAAAAGTGCAAATATTGCTATGGAAGTGGTATGTTCATGTGAAACTTATTACATATCATTGCACAATGTCTACACTATTGAACTCTCGACCAATAGTCAGTGTCTTTTTTTGATTATTTGAGTTCATGGTACTGACCATAATCTCATTTCATGGTCATTTGATTTGGTGTAGGGTACTTGGCATGTGCACGATGTTCAGCAAGCGGTAAATGCCTCTATACTGAACCAATTTCAGTGAATGGTTCTTATCAATCGTTGCGTGCACCAACTCTTAAAAGATGTGCGAATTGCTCCGGGACTGGAAAGGTATGAAACATGATCATCTCCCTACTTCATGCACTCAACAGTCATATTATATCAGTTCAATAAGTAGTAACTTTACAAGAAAAAACAAATATCTGTGTCTGTTACAATCCGTCCCATAGTCGAGCATCTCAAAAATGTGTGACCGAAGAATAAAACAGTCATATTCGTCCACATTACATGGCCAAAATGAGGCCTTCCCTTGTAGTTAGAATAACATCCTCAACAACAACAAGGTTCGTTGAACCCCTTCTTCCTATCCTTGCTCGTTGCTACCTACGAAATGAGTTCCTCTAAGAAGATGCATGTCACAAATACGCGCATGCATCTCTCATCACATGTTACGATAACTTTCCCTTATCGTATACGTATATATGCTAATGTTTTTTGTTTCATATTATGATATTTTTTGGCTAGGTAATGTGCCCTACATGTCTGTGTACTGGGATGGTGATGGCAAGTGAACATGACCTTCGAATAGATCCATTTGATTAAGTACAAATTCTCATTTTGTAACTTATATTCATACAAAAAATAATTGGTCATTTTGGTTTTGTTATAAGCATAGTTATTATATATAGAATATCCTTTGGTTATGAAGATGATAACTCCTCATCTATTTAACAATGAAGGTGTTAGAAATTTCGTTAAGCGTATGTGTTCAAGATTTGATATAAATGTATGAAACAGAATTTTCGACCTATATACTGAATACCATTTTTATATATGTGGTATATGACGAAAGAGTGTCTGATTCGCCACCTCATCTTTTTATGAGTAACTAATAATAACACCAATTATGCATTTCGAAAGTTAGGCTATATGAATTTTTACTTCTTTGTTTAATCTTAATTCATGTTAATGTAATTGTTGGATAATTATAATTATAAATAATAAATTATTCAAATTAATACATATCTGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACAGCTGTCAATAATTTTTTTCGATTTTTAAAAAACTTAATTTCTAATCTTGTTTTTCTTCTATACTATAACAGTATAACTAGTTTTTTATTTGTCTAAGTTTTGATAAATAATATAATTTGATATTTATATTGATAAGAAATAGTAAATATATCACAAAATTAATTGAAATATACATAAACTTATTTGAACACTGTAAAAATTTTAGGTGAAAAAAGAAAGTAA</genome_strand>
        <mrna_strand>AGTG-GAGTCATCTCAGCCCTCATGCTAATAGAAGCTAACAATGTAGTCCAACAAGAGAAGAAAAAGTGCAAATATTGCTATGGAAGTG................................................................................................................................................GGTACTTGGCATGTGCACGATGTTCAGCAAGCGGTAAATGCCTCTATACTGAACCAATTTCAGTGAATGGTTCTTATCAATCGTTGCGTGCACCAACTCTTAAAAGATGTGCGAATTGCTCCGGGACTGGAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTGCCCTACATGTCTGTGTACTGGGATGGTGATGGCAAGTGAACATGACCTTCGAATAGATCCATTTGATTAAGTACAAATTCTCATTTTGTAACTTATATTCATACAAAAAATAATTGGTCATTTTGGTTTTGTTATAAGCATAGTTATTATATATAGAATATCCTTTGGTTATGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E239377" ref_strand="-" ref_description="SGN-E239377 [cLEL-9-J22]">
      <seq>gcctctatactgaaccaatttcagtgaatggttcttatcaatagttgcgtgcaccaactcttaaaaaatgtgcaaattgccccgggactggaaaggtaatgtgccctacatgtctgtgtactgggatggtgatggccagtgaacatgaccttcgaatagatccatttgattaagtacaaattctcattttgtaacttatattcatacaaaaaataattggtcattttggctttgttataagcatagttattatatatagaatatcctttggttatcaagaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="111321" stop="1843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111021" g_stop="110927" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110926" i_stop="110513" i_length="414">
            <donor d_prob="0.996" d_score="0.94"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110512" g_stop="110329" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="279" r_length="184" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110328" i_stop="109732" i_length="597">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="109731" g_stop="109715" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="296" r_length="17" r_score="0.647"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E239377" ref_strand="-">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>296</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E239377" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="111021" e_stop="110927"/>
          <exon e_start="110512" e_stop="110329"/>
          <exon e_start="109731" e_stop="109715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTCTATACTGAACCAATTTCAGTGAATGGTTCTTATCAATCGTTGCGTGCACCAACTCTTAAAAGATGTGCGAATTGCTCCGGGACTGGAAAGGTATGAAACATGATCATCTCCCTACTTCATGCACTCAACAGTCATATTATATCAGTTCAATAAGTAGTAACTTTACAAGAAAAAACAAATATCTGTGTCTGTTACAATCCGTCCCATAGTCGAGCATCTCAAAAATGTGTGACCGAAGAATAAAACAGTCATATTCGTCCACATTACATGGCCAAAATGAGGCCTTCCCTTGTAGTTAGAATAACATCCTCAACAACAACAAGGTTCGTTGAACCCCTTCTTCCTATCCTTGCTCGTTGCTACCTACGAAATGAGTTCCTCTAAGAAGATGCATGTCACAAATACGCGCATGCATCTCTCATCACATGTTACGATAACTTTCCCTTATCGTATACGTATATATGCTAATGTTTTTTGTTTCATATTATGATATTTTTTGGCTAGGTAATGTGCCCTACATGTCTGTGTACTGGGATGGTGATGGCAAGTGAACATGACCTTCGAATAGATCCATTTGATTAAGTACAAATTCTCATTTTGTAACTTATATTCATACAAAAAATAATTGGTCATTTTGGTTTTGTTATAAGCATAGTTATTATATATAGAATATCCTTTGGTTATGAAGATGATAACTCCTCATCTATTTAACAATGAAGGTGTTAGAAATTTCGTTAAGCGTATGTGTTCAAGATTTGATATAAATGTATGAAACAGAATTTTCGACCTATATACTGAATACCATTTTTATATATGTGGTATATGACGAAAGAGTGTCTGATTCGCCACCTCATCTTTTTATGAGTAACTAATAATAACACCAATTATGCATTTCGAAAGTTAGGCTATATGAATTTTTACTTCTTTGTTTAATCTTAATTCATGTTAATGTAATTGTTGGATAATTATAATTATAAATAATAAATTATTCAAATTAATACATATCTGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACAGCTGTCAATAATTTTTTTCGATTTTTAAAAAACTTAATTTCTAATCTTGTTTTTCTTCTATACTATAACAGTATAACTAGTTTTTTATTTGTCTAAGTTTTGATAAATAATATAATTTGATATTTATATTGATAAGAAATAGTAAATATATCACAAAATTAATTGAAATATACATAAACTTATTTGAACACTGTAAAAATTTTAGGTGAAAAAAGAAAGTAA</genome_strand>
        <mrna_strand>GCCTCTATACTGAACCAATTTCAGTGAATGGTTCTTATCAATAGTTGCGTGCACCAACTCTTAAAAAATGTGCAAATTGCCCCGGGACTGGAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTGCCCTACATGTCTGTGTACTGGGATGGTGATGGCCAGTGAACATGACCTTCGAATAGATCCATTTGATTAAGTACAAATTCTCATTTTGTAACTTATATTCATACAAAAAATAATTGGTCATTTTGGCTTTGTTATAAGCATAGTTATTATATATAGAATATCCTTTGGTTATCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-UUqe55/sgn_ests_tomato_potato" ref_id="SGN-E270644" ref_strand="+" ref_description="SGN-E270644 [cLEM-6-K7]">
      <seq>tttcttcctaacatgactccaaagacactaaagcagctttatcttacaagcttttcatttatagctgggattatggtcttcggtggattacttgccccagtacttgagctgaaattaggtctaggaggcacctcatacgaagattttatacgtaacatgcatttgcctatgcaattgagccaggtcgaccccatagtggcgtccttttcaggcggggcagtgggagtcatctcagccctcatgctaatagaagctaacaatgtagtccaacaagagaagaaaaagtgcaaatattgctatggaagtgggtacttggcatgtgcacgatgttcagcaagcggtaaatgcctctatactgaaccaatttcagtgaatggttcttatcaatcgttgcgtgcaccaactcttaaaagatgtgcgaattgctccgggactggaaaggtatgaaacatgatcatctccctacttcatgcactcaacagtcatattatatcagttcaataagtagtaactttacaagaaaaaacaaatatctgtgtctgttacaatccgtcccatagtcgagcatctcaaaaatgtgtgaccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0168F14-gVfQg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0168F14.2" temp_strand="-" temp_description="C09HBa0168F14.2  EF647606.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0168F14 upload_account_name:spain">
        <position start="111803" stop="110482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111803" g_stop="111755" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="102" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111754" i_stop="111620" i_length="135">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111619" g_stop="111543" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="179" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111542" i_stop="111333" i_length="210">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.477" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111332" g_stop="111205" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="307" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="111204" i_stop="111061" i_length="144">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="111060" g_stop="110782" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="586" r_length="279" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0168F14.2" gen_strand="-" ref_id="SGN-E270644" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0168F14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E270644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111803" e_stop="111755"/>
          <exon e_start="111619" e_stop="111543"/>
          <exon e_start="111332" e_stop="111205"/>
          <exon e_start="111060" e_stop="110782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTTATAGCTGGGATTATGGTCTTCGGTGGATTACTTGCCCCAGTAGTAAGCTCATGAACTCAATTATTTCCTTATCCTTATTCTGGTTCTGCATTATGCATAACGGTACTATGGAGTTATTTATTTCCCTATTCTTGAATGATGAAGTCTTTCGACTATTGTAACTCTTTGATATTGCAGCTTGAGCTGAAATTAGGTCTAGGAGGCACCTCATACGAAGATTTTATACGTAACATGCATTTGCCTATGCAATTGAGGTATGTAAACTGTAACCTGAAGTCCTGAACTACATTTTCATGTGTAGAAAAGGTCGGTGAATTGTTCCTCACAAACATCATTAAATTGTGCACATTTGTTCACTGCATTGTTCTTTACCTTCCCAAAAAAGGAGCGTCACAAAATAGAAACAGAAGACCACTTACGTCCTCGTGAATTTGGGTACCGACTTCTTTTTCTCTTCTTCTCAGCCAGGTCGACCCCATAGTGGCGTCCTTTTCAGGCGGGGCAGTGGGAGTCATCTCAGCCCTCATGCTAATAGAAGCTAACAATGTAGTCCAACAAGAGAAGAAAAAGTGCAAATATTGCTATGGAAGTGGTATGTTCATGTGAAACTTATTACATATCATTGCACAATGTCTACACTATTGAACTCTCGACCAATAGTCAGTGTCTTTTTTTGATTATTTGAGTTCATGGTACTGACCATAATCTCATTTCATGGTCATTTGATTTGGTGTAGGGTACTTGGCATGTGCACGATGTTCAGCAAGCGGTAAATGCCTCTATACTGAACCAATTTCAGTGAATGGTTCTTATCAATCGTTGCGTGCACCAACTCTTAAAAGATGTGCGAATTGCTCCGGGACTGGAAAGGTATGAAACATGATCATCTCCCTACTTCATGCACTCAACAGTCATATTATATCAGTTCAATAAGTAGTAACTTTACAAGAAAAAACAAATATCTGTGTCTGTTACAATCCGTCCCATAGTCGAGCATCTCAAAAATGTGTGACCG</genome_strand>
        <mrna_strand>TTCATTTATAGCTGGGATTATGGTCTTCGGTGGATTACTTGCCCCAGTA.......................................................................................................................................CTTGAGCTGAAATTAGGTCTAGGAGGCACCTCATACGAAGATTTTATACGTAACATGCATTTGCCTATGCAATTGAG..................................................................................................................................................................................................................CCAGGTCGACCCCATAGTGGCGTCCTTTTCAGGCGGGGCAGTGGGAGTCATCTCAGCCCTCATGCTAATAGAAGCTAACAATGTAGTCCAACAAGAGAAGAAAAAGTGCAAATATTGCTATGGAAGTG................................................................................................................................................GGTACTTGGCATGTGCACGATGTTCAGCAAGCGGTAAATGCCTCTATACTGAACCAATTTCAGTGAATGGTTCTTATCAATCGTTGCGTGCACCAACTCTTAAAAGATGTGCGAATTGCTCCGGGACTGGAAAGGTATGAAACATGATCATCTCCCTACTTCATGCACTCAACAGTCATATTATATCAGTTCAATAAGTAGTAACTTTACAAGAAAAAACAAATATCTGTGTCTGTTACAATCCGTCCCATAGTCGAGCATCTCAAAAATGTGTGACCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>324</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="6602" PGL_stop="4882"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6602" e_stop="6341"/>
            <exon e_start="5245" e_stop="4882"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.976" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="6602" e_stop="6341" e_length="262"/>
          </exon>
          <intron i_serial="1" don_prob="0.976" acc_prob="0.989">
            <gDNA_intron_boundary i_start="6340" i_stop="5246" i_length="1095"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="5245" e_stop="4882" e_length="364"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6602" stop="6341"/>
              <exon start="5245" stop="4970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6600" stop="6341"/>
              <exon start="5245" stop="4934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6598" stop="6341"/>
              <exon start="5245" stop="4882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6598" stop="6341"/>
              <exon start="5245" stop="4885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6590" stop="6341"/>
              <exon start="5245" stop="4919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318688" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6589" stop="6341"/>
              <exon start="5245" stop="4984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341807" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAGACATGGACATGTCAAATCCTGCCGTCTTTGTCAATGCTGAGTTCCTCAAGGAGCATGTAGGACGGAAGGTTCGAACAGTGGTTCAGGTTATGCAATCTGATGGTGATAAAGTCATTGGAAAATCCACGGATGAAAAAGAATTAGTTGTGAAAGGAAATCCACCTAATGCTCTTTCAACTTTTGTTGAAGTAATTGGTATAGCTGACACTATCCAGTCTATTGAAGCAGAAATTTGGACCAATTTTGGTGATACATTTG : ATGTTAATAGCTATGACAAGGTGTGCAGACTAGCAAATGGTGACAGTAAGCACTTGTTTATCTGAGAAATGATTTATAAAAGAGGACATATATCCTCTTATTTCTGCTGCATTGTTCCAGAGTTTCAATGTATTATAAGTAGTTTGAAGTACTCCTGAAAACTTTGGATTTTCAGCTTCTATTTAGGGTTTCATCAACAGAAGTTAAGCTCTGTGCTTAGATGTAAACTTGTTTTTCTTCAACTTATGCTATTTGGTATTTTGAACACTAATATTTGTGGTTCCACTAGTTAGTCAACTTGGCATTAAACTAGCTGTGTTACATACATAAGTTGTAACTTGTAAGTATGAACTATGTCTAGTTC</gDNA_template>
            <first_frame> V  D  M  D  M  S  N  P  A  V  F  V  N  A  E  F  L  K  E  H  V  G  R  K  V  R  T  V  V  Q  V  M  Q  S  D  G  D  K  V  I  G  K  S  T  D  E  K  E  L  V  V  K  G  N  P  P  N  A  L  S  T  F  V  E  V  I  G  I  A  D  T  I  Q  S  I  E  A  E  I  W  T  N  F  G  D  T  F   : D  V  N  S  Y  D  K  V  C  R  L  A  N  G  D  S  K  H  L  F  I  *  E  M  I  Y  K  R  G  H  I  S  S  Y  F  C  C  I  V  P  E  F  Q  C  I  I  S  S  L  K  Y  S  *  K  L  W  I  F  S  F  Y  L  G  F  H  Q  Q  K  L  S  S  V  L  R  C  K  L  V  F  L  Q  L  M  L  F  G  I  L  N  T  N  I  C  G  S  T  S  *  S  T  W  H  *  T  S  C  V  T  Y  I  S  C  N  L  *  V  *  T  M  S  S   </first_frame>
            <second_frame>  *  T  W  T  C  Q  I  L  P  S  L  S  M  L  S  S  S  R  S  M  *  D  G  R  F  E  Q  W  F  R  L  C  N  L  M  V  I  K  S  L  E  N  P  R  M  K  K  N  *  L  *  K  E  I  H  L  M  L  F  Q  L  L  L  K  *  L  V  *  L  T  L  S  S  L  L  K  Q  K  F  G  P  I  L  V  I  H  L  :  M  L  I  A  M  T  R  C  A  D  *  Q  M  V  T  V  S  T  C  L  S  E  K  *  F  I  K  E  D  I  Y  P  L  I  S  A  A  L  F  Q  S  F  N  V  L  *  V  V  *  S  T  P  E  N  F  G  F  S  A  S  I  *  G  F  I  N  R  S  *  A  L  C  L  D  V  N  L  F  F  F  N  L  C  Y  L  V  F  *  T  L  I  F  V  V  P  L  V  S  Q  L  G  I  K  L  A  V  L  H  T  *  V  V  T  C  K  Y  E  L  C  L  V  </second_frame>
            <third_frame>   R  H  G  H  V  K  S  C  R  L  C  Q  C  *  V  P  Q  G  A  C  R  T  E  G  S  N  S  G  S  G  Y  A  I  *  W  *  *  S  H  W  K  I  H  G  *  K  R  I  S  C  E  R  K  S  T  *  C  S  F  N  F  C  *  S  N  W  Y  S  *  H  Y  P  V  Y  *  S  R  N  L  D  Q  F  W  *  Y  I  * :   C  *  *  L  *  Q  G  V  Q  T  S  K  W  *  Q  *  A  L  V  Y  L  R  N  D  L  *  K  R  T  Y  I  L  L  F  L  L  H  C  S  R  V  S  M  Y  Y  K  *  F  E  V  L  L  K  T  L  D  F  Q  L  L  F  R  V  S  S  T  E  V  K  L  C  A  *  M  *  T  C  F  S  S  T  Y  A  I  W  Y  F  E  H  *  Y  L  W  F  H  *  L  V  N  L  A  L  N  *  L  C  Y  I  H  K  L  *  L  V  S  M  N  Y  V  *  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6602" stop="6341"/>
                    <exon start="5245" stop="5181"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>324</number_coding_nucleotides>
                  <number_encoded_amino_acids>108</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VDMDMSNPAVFVNAEFLKEHVGRKVRTVVQVMQSDGDKVIGKSTDEKELVVKGNPPNALSTFVEVIGIADTIQSIEAEIWTNFGDTFDVNSYDKVCRLANGDSKHLFI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="7536" PGL_stop="6763"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7536" e_stop="6763"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7536" e_stop="6763" e_length="774"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7536" stop="6763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689281" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7535" stop="6947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325549" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTTTGTGTGTTTACTGGTTTTGATTTTGAACCCTTCAGTTTTGTTTTAATAATGAGTTTTTGTTTCCCGGTGTCTACCCATAATTTTCTGTGTAGAGATTTCCCTGATTTACATTTAATAGTGTATCAAGTTGCTACACAAAATTGTGATAAATAGATCTTTTCTTTTTTTTAATGATTTGGGTTGTTACACTTTGTTCATTTGTGTAATTGGTTTTGTACTTTCTGTAATTATGGGTAATGAAAAATCAAGGTTCTTGGAAGTGTTTTGCAATTTTTTTTAAAAAAAAAATCCTTGAAAAAAATGCAGTCAATGGTAAATTATGATTCCCAAATGATATCTATGTCATTCTTTGAACAATGGAATCTATTGAGGTAATGGTTTGATGTAAAATATGATGTTAGAAGTTTTAGCGGGTTAGAATTGTTTAATCTTGTTTAGTAGATGCGTACTGTGCATGTTCGATGATGGATGTGATTGTTTTTATATAAGCAACTGTTAATAGTATTGTCGTATTCTGATTTTCGATGGTGTAAGAAACTTTAACTCACAGGCTTCTGATTTGTTGTCTTTTAAAGTTTTAATTGCAAGAGCTTGTGAAAGTGTATAAGGTTTACTATTTGTTTACTAGAGCTCTTGAACCAGAAGCTTAATATTGGAAAGAGATGGAAAGGTTTTTAAGCATTTATGAGTTCTGAATTTGATTTTCTTCATTGGTACAGCTAGTCGTTGAAATGCTTGTAGATGTGATATATCACTCAAAATCCTAAATT</gDNA_template>
            <first_frame> S  L  C  V  Y  W  F  *  F  *  T  L  Q  F  C  F  N  N  E  F  L  F  P  G  V  Y  P  *  F  S  V  *  R  F  P  *  F  T  F  N  S  V  S  S  C  Y  T  K  L  *  *  I  D  L  F  F  F  L  M  I  W  V  V  T  L  C  S  F  V  *  L  V  L  Y  F  L  *  L  W  V  M  K  N  Q  G  S  W  K  C  F  A  I  F  F  K  K  K  I  L  E  K  N  A  V  N  G  K  L  *  F  P  N  D  I  Y  V  I  L  *  T  M  E  S  I  E  V  M  V  *  C  K  I  *  C  *  K  F  *  R  V  R  I  V  *  S  C  L  V  D  A  Y  C  A  C  S  M  M  D  V  I  V  F  I  *  A  T  V  N  S  I  V  V  F  *  F  S  M  V  *  E  T  L  T  H  R  L  L  I  C  C  L  L  K  F  *  L  Q  E  L  V  K  V  Y  K  V  Y  Y  L  F  T  R  A  L  E  P  E  A  *  Y  W  K  E  M  E  R  F  L  S  I  Y  E  F  *  I  *  F  S  S  L  V  Q  L  V  V  E  M  L  V  D  V  I  Y  H  S  K  S  *  I </first_frame>
            <second_frame>  V  C  V  F  T  G  F  D  F  E  P  F  S  F  V  L  I  M  S  F  C  F  P  V  S  T  H  N  F  L  C  R  D  F  P  D  L  H  L  I  V  Y  Q  V  A  T  Q  N  C  D  K  *  I  F  S  F  F  *  *  F  G  L  L  H  F  V  H  L  C  N  W  F  C  T  F  C  N  Y  G  *  *  K  I  K  V  L  G  S  V  L  Q  F  F  L  K  K  K  S  L  K  K  M  Q  S  M  V  N  Y  D  S  Q  M  I  S  M  S  F  F  E  Q  W  N  L  L  R  *  W  F  D  V  K  Y  D  V  R  S  F  S  G  L  E  L  F  N  L  V  *  *  M  R  T  V  H  V  R  *  W  M  *  L  F  L  Y  K  Q  L  L  I  V  L  S  Y  S  D  F  R  W  C  K  K  L  *  L  T  G  F  *  F  V  V  F  *  S  F  N  C  K  S  L  *  K  C  I  R  F  T  I  C  L  L  E  L  L  N  Q  K  L  N  I  G  K  R  W  K  G  F  *  A  F  M  S  S  E  F  D  F  L  H  W  Y  S  *  S  L  K  C  L  *  M  *  Y  I  T  Q  N  P  K   </second_frame>
            <third_frame>   F  V  C  L  L  V  L  I  L  N  P  S  V  L  F  *  *  *  V  F  V  S  R  C  L  P  I  I  F  C  V  E  I  S  L  I  Y  I  *  *  C  I  K  L  L  H  K  I  V  I  N  R  S  F  L  F  F  N  D  L  G  C  Y  T  L  F  I  C  V  I  G  F  V  L  S  V  I  M  G  N  E  K  S  R  F  L  E  V  F  C  N  F  F  *  K  K  N  P  *  K  K  C  S  Q  W  *  I  M  I  P  K  *  Y  L  C  H  S  L  N  N  G  I  Y  *  G  N  G  L  M  *  N  M  M  L  E  V  L  A  G  *  N  C  L  I  L  F  S  R  C  V  L  C  M  F  D  D  G  C  D  C  F  Y  I  S  N  C  *  *  Y  C  R  I  L  I  F  D  G  V  R  N  F  N  S  Q  A  S  D  L  L  S  F  K  V  L  I  A  R  A  C  E  S  V  *  G  L  L  F  V  Y  *  S  S  *  T  R  S  L  I  L  E  R  D  G  K  V  F  K  H  L  *  V  L  N  L  I  F  F  I  G  T  A  S  R  *  N  A  C  R  C  D  I  S  L  K  I  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0168F14.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="12376" PGL_stop="7561"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12376" e_stop="12323"/>
            <exon e_start="10384" e_stop="10197"/>
            <exon e_start="9615" e_stop="9486"/>
            <exon e_start="8791" e_stop="8344"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.521" e_score="0.963"/>
          <exon-intron don_prob="0.999" acc_prob="0.756" e_score="0.973"/>
          <exon-intron don_prob="0.981" acc_prob="0.982" e_score="0.985"/>
          <exon-only e_score="0.929"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.963">
            <gDNA_exon_boundary e_start="12376" e_stop="12323" e_length="54"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.521">
            <gDNA_intron_boundary i_start="12322" i_stop="10385" i_length="1938"/>
          </intron>
          <exon e_serial="2" e_score="0.973">
            <gDNA_exon_boundary e_start="10384" e_stop="10197" e_length="188"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.756">
            <gDNA_intron_boundary i_start="10196" i_stop="9616" i_length="581"/>
          </intron>
          <exon e_serial="3" e_score="0.985">
            <gDNA_exon_boundary e_start="9615" e_stop="9486" e_length="130"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.982">
            <gDNA_intron_boundary i_start="9485" i_stop="8792" i_length="694"/>
          </intron>
          <exon e_serial="4" e_score="0.929">
            <gDNA_exon_boundary e_start="8791" e_stop="8344" e_length="448"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12376" stop="12323"/>
              <exon start="10384" stop="10197"/>
              <exon start="9615" stop="9486"/>
              <exon start="8791" stop="8421"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12376" stop="12323"/>
              <exon start="10384" stop="10197"/>
              <exon start="9615" stop="9486"/>
              <exon start="8791" stop="8466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431510" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9542" stop="9486"/>
              <exon start="8791" stop="8344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431511" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCATACGAATCAAGAGTTTAAGGAGAAACATTGGCTTGGTCTCTCAAGATACA : ACATTATTTTCTGGAAGTGTTGCCGAGAACATTGGATATAGGGATAGAATGGCTGGTATTGATATGGAGAGGGTGAAGCTTGCTGCCAGAAATGCAAGTGCGGAAGAATTTATTGAAGCGCTGCCTCTTAGCTATGAGACAAATGTTGGACCTAGGGGCTCAATTTTCAGTGGAGGGCAGAAGCAAAG : AATAGCTATTGCTCGGGCTCTTTATCAGGATCCATCTATTCTAATATTGGATGAAGCTACTTCAGCATTAGACAGCAAGTCAGAGCTGTTGGTAAGACAAGCTCTGCAGCACCTGATGCAAAATCGTACT : GTACTAGTGATTGCTCACCGCTTGGAAACAGTTTTAATGGCTGAACGAGTTTTCCTTTTAGAAGATGGATACTTGCAGGAGGTTCCTCGCGCCTCTCTTTTAGACAGTCGAAGTGGCTCACTGGCATCGATGAGTTTAACAATATGATGTTTATATGAAGCTAAAGGTCTGCTTCTTGGAAATGAATATGCATTTGTTGCTCTAGTATGGAAGTATGTCCTACAACTTCCTTATCCTTCCCATGTAAGCTGCTCGTCGCGTCAAATGCCCCTTTATATGAAGCTAAAGGTCTGTAAAGTGTTGTAAACTGCTTGTACAAGTACTTACAGAGTGATGTATATCATTGAATATCTTTACATACGTTAGAAAATGCACCAGAGGCAACACAATAATGTTTTTTTTTTGGGCCTCGTATATTCTAGTGGTAAATGATCAATTGAATTTAAGT</gDNA_template>
            <first_frame> G  I  R  I  K  S  L  R  R  N  I  G  L  V  S  Q  D  T  :  T  L  F  S  G  S  V  A  E  N  I  G  Y  R  D  R  M  A  G  I  D  M  E  R  V  K  L  A  A  R  N  A  S  A  E  E  F  I  E  A  L  P  L  S  Y  E  T  N  V  G  P  R  G  S  I  F  S  G  G  Q  K  Q  R :   I  A  I  A  R  A  L  Y  Q  D  P  S  I  L  I  L  D  E  A  T  S  A  L  D  S  K  S  E  L  L  V  R  Q  A  L  Q  H  L  M  Q  N  R  T  :  V  L  V  I  A  H  R  L  E  T  V  L  M  A  E  R  V  F  L  L  E  D  G  Y  L  Q  E  V  P  R  A  S  L  L  D  S  R  S  G  S  L  A  S  M  S  L  T  I  *  C  L  Y  E  A  K  G  L  L  L  G  N  E  Y  A  F  V  A  L  V  W  K  Y  V  L  Q  L  P  Y  P  S  H  V  S  C  S  S  R  Q  M  P  L  Y  M  K  L  K  V  C  K  V  L  *  T  A  C  T  S  T  Y  R  V  M  Y  I  I  E  Y  L  Y  I  R  *  K  M  H  Q  R  Q  H  N  N  V  F  F  L  G  L  V  Y  S  S  G  K  *  S  I  E  F  K  </first_frame>
            <second_frame>  A  Y  E  S  R  V  *  G  E  T  L  A  W  S  L  K  I  Q :   H  Y  F  L  E  V  L  P  R  T  L  D  I  G  I  E  W  L  V  L  I  W  R  G  *  S  L  L  P  E  M  Q  V  R  K  N  L  L  K  R  C  L  L  A  M  R  Q  M  L  D  L  G  A  Q  F  S  V  E  G  R  S  K   : E  *  L  L  L  G  L  F  I  R  I  H  L  F  *  Y  W  M  K  L  L  Q  H  *  T  A  S  Q  S  C  W  *  D  K  L  C  S  T  *  C  K  I  V  L :   Y  *  *  L  L  T  A  W  K  Q  F  *  W  L  N  E  F  S  F  *  K  M  D  T  C  R  R  F  L  A  P  L  F  *  T  V  E  V  A  H  W  H  R  *  V  *  Q  Y  D  V  Y  M  K  L  K  V  C  F  L  E  M  N  M  H  L  L  L  *  Y  G  S  M  S  Y  N  F  L  I  L  P  M  *  A  A  R  R  V  K  C  P  F  I  *  S  *  R  S  V  K  C  C  K  L  L  V  Q  V  L  T  E  *  C  I  S  L  N  I  F  T  Y  V  R  K  C  T  R  G  N  T  I  M  F  F  F  W  A  S  Y  I  L  V  V  N  D  Q  L  N  L  S </second_frame>
            <third_frame>   H  T  N  Q  E  F  K  E  K  H  W  L  G  L  S  R  Y   : N  I  I  F  W  K  C  C  R  E  H  W  I  *  G  *  N  G  W  Y  *  Y  G  E  G  E  A  C  C  Q  K  C  K  C  G  R  I  Y  *  S  A  A  S  *  L  *  D  K  C  W  T  *  G  L  N  F  Q  W  R  A  E  A  K  :  N  S  Y  C  S  G  S  L  S  G  S  I  Y  S  N  I  G  *  S  Y  F  S  I  R  Q  Q  V  R  A  V  G  K  T  S  S  A  A  P  D  A  K  S  Y   : C  T  S  D  C  S  P  L  G  N  S  F  N  G  *  T  S  F  P  F  R  R  W  I  L  A  G  G  S  S  R  L  S  F  R  Q  S  K  W  L  T  G  I  D  E  F  N  N  M  M  F  I  *  S  *  R  S  A  S  W  K  *  I  C  I  C  C  S  S  M  E  V  C  P  T  T  S  L  S  F  P  C  K  L  L  V  A  S  N  A  P  L  Y  E  A  K  G  L  *  S  V  V  N  C  L  Y  K  Y  L  Q  S  D  V  Y  H  *  I  S  L  H  T  L  E  N  A  P  E  A  T  Q  *  C  F  F  F  G  P  R  I  F  *  W  *  M  I  N  *  I  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12376" stop="12323"/>
                    <exon start="10384" stop="10197"/>
                    <exon start="9615" stop="9486"/>
                    <exon start="8791" stop="8645"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GIRIKSLRRNIGLVSQDTTLFSGSVAENIGYRDRMAGIDMERVKLAARNASAEEFIEALPLSYETNVGPRGSIFSGGQKQRIAIARALYQDPSILILDEATSALDSKSELLVRQALQHLMQNRTVLVIAHRLETVLMAERVFLLEDGYLQEVPRASLLDSRSGSLASMSLTI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="12376" e_stop="12323"/>
            <exon e_start="10384" e_stop="10197"/>
            <exon e_start="9615" e_stop="9486"/>
            <exon e_start="8791" e_stop="8427"/>
            <exon e_start="7594" e_stop="7561"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.521" e_score="0.963"/>
          <exon-intron don_prob="0.999" acc_prob="0.756" e_score="0.973"/>
          <exon-intron don_prob="0.981" acc_prob="0.982" e_score="0.985"/>
          <exon-intron don_prob="0.000" acc_prob="0.182" e_score="0.933"/>
          <exon-only e_score="0.676"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.963">
            <gDNA_exon_boundary e_start="12376" e_stop="12323" e_length="54"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.521">
            <gDNA_intron_boundary i_start="12322" i_stop="10385" i_length="1938"/>
          </intron>
          <exon e_serial="2" e_score="0.973">
            <gDNA_exon_boundary e_start="10384" e_stop="10197" e_length="188"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.756">
            <gDNA_intron_boundary i_start="10196" i_stop="9616" i_length="581"/>
          </intron>
          <exon e_serial="3" e_score="0.985">
            <gDNA_exon_boundary e_start="9615" e_stop="9486" e_length="130"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.982">
            <gDNA_intron_boundary i_start="9485" i_stop="8792" i_length="694"/>
          </intron>
          <exon e_serial="4" e_score="0.933">
            <gDNA_exon_boundary e_start="8791" e_stop="8427" e_length="365"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.182">
            <gDNA_intron_boundary i_start="8426" i_stop="7595" i_length="832"/>
          </intron>
          <exon e_serial="5" e_score="0.676">
            <gDNA_exon_boundary e_start="7594" e_stop="7561" e_length="34"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12376" stop="12323"/>
              <exon start="10384" stop="10197"/>
              <exon start="9615" stop="9486"/>
              <exon start="8791" stop="8466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431510" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8771" stop="8427"/>
              <exon start="7594" stop="7561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E597521" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCATACGAATCAAGAGTTTAAGGAGAAACATTGGCTTGGTCTCTCAAGATACA : ACATTATTTTCTGGAAGTGTTGCCGAGAACATTGGATATAGGGATAGAATGGCTGGTATTGATATGGAGAGGGTGAAGCTTGCTGCCAGAAATGCAAGTGCGGAAGAATTTATTGAAGCGCTGCCTCTTAGCTATGAGACAAATGTTGGACCTAGGGGCTCAATTTTCAGTGGAGGGCAGAAGCAAAG : AATAGCTATTGCTCGGGCTCTTTATCAGGATCCATCTATTCTAATATTGGATGAAGCTACTTCAGCATTAGACAGCAAGTCAGAGCTGTTGGTAAGACAAGCTCTGCAGCACCTGATGCAAAATCGTACT : GTACTAGTGATTGCTCACCGCTTGGAAACAGTTTTAATGGCTGAACGAGTTTTCCTTTTAGAAGATGGATACTTGCAGGAGGTTCCTCGCGCCTCTCTTTTAGACAGTCGAAGTGGCTCACTGGCATCGATGAGTTTAACAATATGATGTTTATATGAAGCTAAAGGTCTGCTTCTTGGAAATGAATATGCATTTGTTGCTCTAGTATGGAAGTATGTCCTACAACTTCCTTATCCTTCCCATGTAAGCTGCTCGTCGCGTCAAATGCCCCTTTATATGAAGCTAAAGGTCTGTAAAGTGTTGTAAACTGCTTGTACAAGTACTTACAGAGTGATGTATATCATTGAATATCTTTACATACGTTA : TGTCCGATCTTCTGTTAAAAAAATATTAAGAATA</gDNA_template>
            <first_frame> G  I  R  I  K  S  L  R  R  N  I  G  L  V  S  Q  D  T  :  T  L  F  S  G  S  V  A  E  N  I  G  Y  R  D  R  M  A  G  I  D  M  E  R  V  K  L  A  A  R  N  A  S  A  E  E  F  I  E  A  L  P  L  S  Y  E  T  N  V  G  P  R  G  S  I  F  S  G  G  Q  K  Q  R :   I  A  I  A  R  A  L  Y  Q  D  P  S  I  L  I  L  D  E  A  T  S  A  L  D  S  K  S  E  L  L  V  R  Q  A  L  Q  H  L  M  Q  N  R  T  :  V  L  V  I  A  H  R  L  E  T  V  L  M  A  E  R  V  F  L  L  E  D  G  Y  L  Q  E  V  P  R  A  S  L  L  D  S  R  S  G  S  L  A  S  M  S  L  T  I  *  C  L  Y  E  A  K  G  L  L  L  G  N  E  Y  A  F  V  A  L  V  W  K  Y  V  L  Q  L  P  Y  P  S  H  V  S  C  S  S  R  Q  M  P  L  Y  M  K  L  K  V  C  K  V  L  *  T  A  C  T  S  T  Y  R  V  M  Y  I  I  E  Y  L  Y  I  R  Y :   V  R  S  S  V  K  K  I  L  R  I </first_frame>
            <second_frame>  A  Y  E  S  R  V  *  G  E  T  L  A  W  S  L  K  I  Q :   H  Y  F  L  E  V  L  P  R  T  L  D  I  G  I  E  W  L  V  L  I  W  R  G  *  S  L  L  P  E  M  Q  V  R  K  N  L  L  K  R  C  L  L  A  M  R  Q  M  L  D  L  G  A  Q  F  S  V  E  G  R  S  K   : E  *  L  L  L  G  L  F  I  R  I  H  L  F  *  Y  W  M  K  L  L  Q  H  *  T  A  S  Q  S  C  W  *  D  K  L  C  S  T  *  C  K  I  V  L :   Y  *  *  L  L  T  A  W  K  Q  F  *  W  L  N  E  F  S  F  *  K  M  D  T  C  R  R  F  L  A  P  L  F  *  T  V  E  V  A  H  W  H  R  *  V  *  Q  Y  D  V  Y  M  K  L  K  V  C  F  L  E  M  N  M  H  L  L  L  *  Y  G  S  M  S  Y  N  F  L  I  L  P  M  *  A  A  R  R  V  K  C  P  F  I  *  S  *  R  S  V  K  C  C  K  L  L  V  Q  V  L  T  E  *  C  I  S  L  N  I  F  T  Y  V   : M  S  D  L  L  L  K  K  Y  *  E   </second_frame>
            <third_frame>   H  T  N  Q  E  F  K  E  K  H  W  L  G  L  S  R  Y   : N  I  I  F  W  K  C  C  R  E  H  W  I  *  G  *  N  G  W  Y  *  Y  G  E  G  E  A  C  C  Q  K  C  K  C  G  R  I  Y  *  S  A  A  S  *  L  *  D  K  C  W  T  *  G  L  N  F  Q  W  R  A  E  A  K  :  N  S  Y  C  S  G  S  L  S  G  S  I  Y  S  N  I  G  *  S  Y  F  S  I  R  Q  Q  V  R  A  V  G  K  T  S  S  A  A  P  D  A  K  S  Y   : C  T  S  D  C  S  P  L  G  N  S  F  N  G  *  T  S  F  P  F  R  R  W  I  L  A  G  G  S  S  R  L  S  F  R  Q  S  K  W  L  T  G  I  D  E  F  N  N  M  M  F  I  *  S  *  R  S  A  S  W  K  *  I  C  I  C  C  S  S  M  E  V  C  P  T  T  S  L  S  F  P  C  K  L  L  V  A  S  N  A  P  L  Y  E  A  K  G  L  *  S  V  V  N  C  L  Y  K  Y  L  Q  S  D  V  Y  H  *  I  S  L  H  T  L  :  C  P  I  F  C  *  K  N  I  K  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12376" stop="12323"/>
                    <exon start="10384" stop="10197"/>
                    <exon start="9615" stop="9486"/>
                    <exon start="8791" stop="8645"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GIRIKSLRRNIGLVSQDTTLFSGSVAENIGYRDRMAGIDMERVKLAARNASAEEFIEALPLSYETNVGPRGSIFSGGQKQRIAIARALYQDPSILILDEATSALDSKSELLVRQALQHLMQNRTVLVIAHRLETVLMAERVFLLEDGYLQEVPRASLLDSRSGSLASMSLTI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="17484" PGL_stop="16813"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17484" e_stop="16813"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.952"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="17484" e_stop="16813" e_length="672"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17484" stop="16951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17479" stop="16813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17479" stop="16937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442080" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGACCAAAATTAGAGTGGATGGATGTTAAGGGACCAAAAACGTAAATACCTAAATTAATCACCGGGAAATGTCCGTAATTCACCTGAAACTGCCGTCTCACGGCCGTTCGCCGTCCCTTCGCCACCACAAACTCACAGTCCCCCGCCAGGTAACCAAACCAATCACTAACATCATCTTCAATTTCTCCATTTCCACCTCTGCCTTAAAAGTAAAATCATCATCTACACGCGCCGCTGCGAACTCCGGCAAGTTCATTTCTCCGTTCACCTCTATAGCTCCTCTTAAACCTTATCTCCTTTCGGAATGGAAATCTATTCTCTGTGGATGGCTCTGTAGTGTAATATCTGTTTACTCTCTGTCCAAAATTGTTCCCAAAGTGGGAAAATTCTCGTCTCTCATGAATCCGTTGGATGTTGTGAGGCTGAGAGAGGAGTGTTTGGTTTTGGGAGGTTTGTTTTTCGTTCGACTCGTTGGTAATTATCTGCAACAAGCGTTTCTATGGGAAGCTGCGTTGAATTGCGTGTATAAGATGAGGATTTGTGTTTTCCATAAGGTTTTGCAGAGAGATTTAGGATTTTTTGAGGGAGAAAAAGGGATTGCTGCTGGAGATGTTGCTTATAGGATTACTGCTGAAGCTTCTGATGTTGCTGATACTGTTTATTCTCTCTTG</gDNA_template>
            <first_frame> R  T  K  I  R  V  D  G  C  *  G  T  K  N  V  N  T  *  I  N  H  R  E  M  S  V  I  H  L  K  L  P  S  H  G  R  S  P  S  L  R  H  H  K  L  T  V  P  R  Q  V  T  K  P  I  T  N  I  I  F  N  F  S  I  S  T  S  A  L  K  V  K  S  S  S  T  R  A  A  A  N  S  G  K  F  I  S  P  F  T  S  I  A  P  L  K  P  Y  L  L  S  E  W  K  S  I  L  C  G  W  L  C  S  V  I  S  V  Y  S  L  S  K  I  V  P  K  V  G  K  F  S  S  L  M  N  P  L  D  V  V  R  L  R  E  E  C  L  V  L  G  G  L  F  F  V  R  L  V  G  N  Y  L  Q  Q  A  F  L  W  E  A  A  L  N  C  V  Y  K  M  R  I  C  V  F  H  K  V  L  Q  R  D  L  G  F  F  E  G  E  K  G  I  A  A  G  D  V  A  Y  R  I  T  A  E  A  S  D  V  A  D  T  V  Y  S  L  L </first_frame>
            <second_frame>  G  P  K  L  E  W  M  D  V  K  G  P  K  T  *  I  P  K  L  I  T  G  K  C  P  *  F  T  *  N  C  R  L  T  A  V  R  R  P  F  A  T  T  N  S  Q  S  P  A  R  *  P  N  Q  S  L  T  S  S  S  I  S  P  F  P  P  L  P  *  K  *  N  H  H  L  H  A  P  L  R  T  P  A  S  S  F  L  R  S  P  L  *  L  L  L  N  L  I  S  F  R  N  G  N  L  F  S  V  D  G  S  V  V  *  Y  L  F  T  L  C  P  K  L  F  P  K  W  E  N  S  R  L  S  *  I  R  W  M  L  *  G  *  E  R  S  V  W  F  W  E  V  C  F  S  F  D  S  L  V  I  I  C  N  K  R  F  Y  G  K  L  R  *  I  A  C  I  R  *  G  F  V  F  S  I  R  F  C  R  E  I  *  D  F  L  R  E  K  K  G  L  L  L  E  M  L  L  I  G  L  L  L  K  L  L  M  L  L  I  L  F  I  L  S   </second_frame>
            <third_frame>   D  Q  N  *  S  G  W  M  L  R  D  Q  K  R  K  Y  L  N  *  S  P  G  N  V  R  N  S  P  E  T  A  V  S  R  P  F  A  V  P  S  P  P  Q  T  H  S  P  P  P  G  N  Q  T  N  H  *  H  H  L  Q  F  L  H  F  H  L  C  L  K  S  K  I  I  I  Y  T  R  R  C  E  L  R  Q  V  H  F  S  V  H  L  Y  S  S  S  *  T  L  S  P  F  G  M  E  I  Y  S  L  W  M  A  L  *  C  N  I  C  L  L  S  V  Q  N  C  S  Q  S  G  K  I  L  V  S  H  E  S  V  G  C  C  E  A  E  R  G  V  F  G  F  G  R  F  V  F  R  S  T  R  W  *  L  S  A  T  S  V  S  M  G  S  C  V  E  L  R  V  *  D  E  D  L  C  F  P  *  G  F  A  E  R  F  R  I  F  *  G  R  K  R  D  C  C  W  R  C  C  L  *  D  Y  C  *  S  F  *  C  C  *  Y  C  L  F  S  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17430" stop="16813"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INHREMSVIHLKLPSHGRSPSLRHHKLTVPRQVTKPITNIIFNFSISTSALKVKSSSTRAAANSGKFISPFTSIAPLKPYLLSEWKSILCGWLCSVISVYSLSKIVPKVGKFSSLMNPLDVVRLREECLVLGGLFFVRLVGNYLQQAFLWEAALNCVYKMRICVFHKVLQRDLGFFEGEKGIAAGDVAYRITAEASDVADTVYSLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="17642" PGL_stop="17933"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17642" e_stop="17933"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="17642" e_stop="17933" e_length="292"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17642" stop="17933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213783" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17643" stop="17817"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207313" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGCAATCTACTTGATATAACTACGTGCAGACATGCCAAGGACTTGGGCATTGGTCTTGGCATGGATGATGGCAAAACAGTACAACACAAGTTCAAGGTGCTTGGGTGTTGGCAAGGCAGCTTGAACGTGCATGGATTACGTGCGGGCTAAAGGCGTTGGCAAGACAGCATGTTGACTTGATGAAGCAAGGCTGTGAAGACTTGGCAAGGTCAAAGACAAAGGCAGTTCACCCGAAATTGCCGAAATAAAACTAAGTGTGGAAGACAGCTAAAATATTCTAAGTGTTGGAAGC</gDNA_template>
            <first_frame> R  N  L  L  D  I  T  T  C  R  H  A  K  D  L  G  I  G  L  G  M  D  D  G  K  T  V  Q  H  K  F  K  V  L  G  C  W  Q  G  S  L  N  V  H  G  L  R  A  G  *  R  R  W  Q  D  S  M  L  T  *  *  S  K  A  V  K  T  W  Q  G  Q  R  Q  R  Q  F  T  R  N  C  R  N  K  T  K  C  G  R  Q  L  K  Y  S  K  C  W  K  </first_frame>
            <second_frame>  A  I  Y  L  I  *  L  R  A  D  M  P  R  T  W  A  L  V  L  A  W  M  M  A  K  Q  Y  N  T  S  S  R  C  L  G  V  G  K  A  A  *  T  C  M  D  Y  V  R  A  K  G  V  G  K  T  A  C  *  L  D  E  A  R  L  *  R  L  G  K  V  K  D  K  G  S  S  P  E  I  A  E  I  K  L  S  V  E  D  S  *  N  I  L  S  V  G  S </second_frame>
            <third_frame>   Q  S  T  *  Y  N  Y  V  Q  T  C  Q  G  L  G  H  W  S  W  H  G  *  W  Q  N  S  T  T  Q  V  Q  G  A  W  V  L  A  R  Q  L  E  R  A  W  I  T  C  G  L  K  A  L  A  R  Q  H  V  D  L  M  K  Q  G  C  E  D  L  A  R  S  K  T  K  A  V  H  P  K  L  P  K  *  N  *  V  W  K  T  A  K  I  F  *  V  L  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0168F14.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="21155" PGL_stop="18927"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21155" e_stop="18927"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="21155" e_stop="18927" e_length="2229"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21155" stop="18927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21081" stop="20327"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434533" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21081" stop="20395"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20904" stop="20378"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391824" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20902" stop="20404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20196" stop="19727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20174" stop="19823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239931" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19968" stop="19366"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244981" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATGATTACTGATTAGCCTTTTAGAAGATCGGAAAACCCTAAAAATGGCTGATCGAGCTCTCTGTTCACTCTCATTTGACTGATAAATCTGCGGATGCGAGGTAATCTCACTATATATTTGTAATCAGTACTGTTTTCTGCTTTTAAATCCTTCAAAAAATGGATGATTTGATGCAAAAATCACTGAAAACCCCCGATTTTTTAGCTGTATTTACTAACAGTACAAGTGAAGGAATTGATAGAATTAGCTATTTGCCGGATGATATACTGCACAATATACTTTCATATCTGTACATCTTTGATGTTGTTCAGCTAAGCATTTTATCGAAAAGATGGAACTATATATGGAGGACAATGCCTTACTTGAATTTTGATATTAATAGCTTTGGTTGTGAAAGGATTGATAGGCTTTGGGATATGGGTATGGCTGAGAAATTCAAAGATTTTATCAATTGGGTGTTGATTAACCGATGTGGGGATAGCCTTGTTTGTTTTAAGCTTTGTTGTGGGGATATTTTTGGTAAAAGGGCTATTTTTCGATGGGTTCGTGTTGTGACAGCTCGAAATGTTCAAGAACTCGTGTTAGATTTTTGTCCTGCTGAGCCATTTGAGTTGCCATATTGTGTTGTGACTTGTGAATCCTTGCGAGTTTTGAAATTACGGCTTGATGGGTCTGTACTTAAGTTGTCTAATCATTTTGGATTTCATCAGCTTAAATTTCTTCATCTTGAAAAAGTTGAGTTATCAAACGAGCATTTGACGAGTTGCTTGTTCTCAAGACTAGAGAAACTGGTATTGGATGGTTGTACTTTTGGAACTATGACTATGCTTGATATTGTTTCAACGTCTCTGGTTTATGTGTCTCTACTGAACTATGTCAATAACGTAGAAGCTTACAACAATTGTATCGTCAAGATTTCTTGCCCGAATCTCAAGGTCTTGAAATATGGTGCTCCATTGGCAAAGGATATGATCATAGAGAATCTCTTGTCTATAGAAGTTGTTCACATCTTATTTTTTTATTCAGACGATGTAATAAAAGAAATTGGAATGCGTTTGCATAAGGTGTTCAAGAATGTCGCTTCTACATCAGCTTTGAAATTATGCAAAGGTTCTGTTGTTGGTTTGTATAGTGTATTTCATGGAGTAAGAAACTTCCCGGTCACGTTTTATAAGCTCAAGTCCTTAAAATTGGCAGTGGCAATTGACGAATCTTGCATGGAAATCATGATGCTATTGCTCAAGCATTCTCCTAATTTAGAGGTTCTTAATTTGTTTTCTGATGAGAATTACGGTTGGGATGAAAACTGGAAGTTCCATGATCCTAGTGAAAGCGTTTTGTGCCTGGAGTCTCATCTAAAGTTGATTCAGTTGGCTGGTTTCAAAAATGAAGATAAAGAGATAGAGCTACTGAGGTTTTTCCTCAAGAATGCACAAGTATTAGAAGAACTGATAATTGTTTGGGATAGCTGTAGTGGCATATCAGAAGAGGCAATAGAGGAGGTTTCCAACTTTCCTAGAGCTTCTTCACATGTTGTTGTCTCATTTCTTAATTTCAAACCCAAATCAAGATCTCGTTACCGGGACAATTCAGTTTAAAAGAGGTTCTGATTGTGAGACGCTATGTTGCTTGGACTTGGACTCTCCAAAAATGTTGTACTACTTTTGGAAGGTCCGACATACATTTGAAGTGTCCAAGTAACATAGGTTAGAAGTACCCTTTTTGGGAACTAGTGCATGAGCAAGCACATGAAGCCTTAACGAATTTCTACTACTGTTTCGCCTTTTCAAAGAGCACTGGACAGACTTCAATGAAGCATATTTGACTCCGGACAAAGAAGCATTCAACTTGTCGACAGATGTTACATGCGTATACAAGATTTAGGAAGTATCAGTCATCTCTTTCTGCACTATATGGTTGTTGTTGACCTCTGAAACGTGTTTTATTATGTTTTCGGACTCGCGTAGGTCATGCCATACACAGTTAAAGATGCATATGAATGCTTTAATCATGAAGAAGATCTGGATGTCCCTGCAAGTATTGATGTTTTTGGTGTATTTCAACTCCAAATTACTCCTCCCAACTATAAGCTAGATGTTTGTGTAACTTATTTAGGTTGATGAACAACTTAAGTCATGTAAATTACTTGATCTCTTTTGTAACTTTTGCATCTTCATGATGTTTTTCTCAATAAAACTTACTTATTTCATCAAAGAGAATGGATACT</gDNA_template>
            <first_frame> *  *  L  L  I  S  L  L  E  D  R  K  T  L  K  M  A  D  R  A  L  C  S  L  S  F  D  *  *  I  C  G  C  E  V  I  S  L  Y  I  C  N  Q  Y  C  F  L  L  L  N  P  S  K  N  G  *  F  D  A  K  I  T  E  N  P  R  F  F  S  C  I  Y  *  Q  Y  K  *  R  N  *  *  N  *  L  F  A  G  *  Y  T  A  Q  Y  T  F  I  S  V  H  L  *  C  C  S  A  K  H  F  I  E  K  M  E  L  Y  M  E  D  N  A  L  L  E  F  *  Y  *  *  L  W  L  *  K  D  *  *  A  L  G  Y  G  Y  G  *  E  I  Q  R  F  Y  Q  L  G  V  D  *  P  M  W  G  *  P  C  L  F  *  A  L  L  W  G  Y  F  W  *  K  G  Y  F  S  M  G  S  C  C  D  S  S  K  C  S  R  T  R  V  R  F  L  S  C  *  A  I  *  V  A  I  L  C  C  D  L  *  I  L  A  S  F  E  I  T  A  *  W  V  C  T  *  V  V  *  S  F  W  I  S  S  A  *  I  S  S  S  *  K  S  *  V  I  K  R  A  F  D  E  L  L  V  L  K  T  R  E  T  G  I  G  W  L  Y  F  W  N  Y  D  Y  A  *  Y  C  F  N  V  S  G  L  C  V  S  T  E  L  C  Q  *  R  R  S  L  Q  Q  L  Y  R  Q  D  F  L  P  E  S  Q  G  L  E  I  W  C  S  I  G  K  G  Y  D  H  R  E  S  L  V  Y  R  S  C  S  H  L  I  F  L  F  R  R  C  N  K  R  N  W  N  A  F  A  *  G  V  Q  E  C  R  F  Y  I  S  F  E  I  M  Q  R  F  C  C  W  F  V  *  C  I  S  W  S  K  K  L  P  G  H  V  L  *  A  Q  V  L  K  I  G  S  G  N  *  R  I  L  H  G  N  H  D  A  I  A  Q  A  F  S  *  F  R  G  S  *  F  V  F  *  *  E  L  R  L  G  *  K  L  E  V  P  *  S  *  *  K  R  F  V  P  G  V  S  S  K  V  D  S  V  G  W  F  Q  K  *  R  *  R  D  R  A  T  E  V  F  P  Q  E  C  T  S  I  R  R  T  D  N  C  L  G  *  L  *  W  H  I  R  R  G  N  R  G  G  F  Q  L  S  *  S  F  F  T  C  C  C  L  I  S  *  F  Q  T  Q  I  K  I  S  L  P  G  Q  F  S  L  K  E  V  L  I  V  R  R  Y  V  A  W  T  W  T  L  Q  K  C  C  T  T  F  G  R  S  D  I  H  L  K  C  P  S  N  I  G  *  K  Y  P  F  W  E  L  V  H  E  Q  A  H  E  A  L  T  N  F  Y  Y  C  F  A  F  S  K  S  T  G  Q  T  S  M  K  H  I  *  L  R  T  K  K  H  S  T  C  R  Q  M  L  H  A  Y  T  R  F  R  K  Y  Q  S  S  L  S  A  L  Y  G  C  C  *  P  L  K  R  V  L  L  C  F  R  T  R  V  G  H  A  I  H  S  *  R  C  I  *  M  L  *  S  *  R  R  S  G  C  P  C  K  Y  *  C  F  W  C  I  S  T  P  N  Y  S  S  Q  L  *  A  R  C  L  C  N  L  F  R  L  M  N  N  L  S  H  V  N  Y  L  I  S  F  V  T  F  A  S  S  *  C  F  S  Q  *  N  L  L  I  S  S  K  R  M  D  T </first_frame>
            <second_frame>  N  D  Y  *  L  A  F  *  K  I  G  K  P  *  K  W  L  I  E  L  S  V  H  S  H  L  T  D  K  S  A  D  A  R  *  S  H  Y  I  F  V  I  S  T  V  F  C  F  *  I  L  Q  K  M  D  D  L  M  Q  K  S  L  K  T  P  D  F  L  A  V  F  T  N  S  T  S  E  G  I  D  R  I  S  Y  L  P  D  D  I  L  H  N  I  L  S  Y  L  Y  I  F  D  V  V  Q  L  S  I  L  S  K  R  W  N  Y  I  W  R  T  M  P  Y  L  N  F  D  I  N  S  F  G  C  E  R  I  D  R  L  W  D  M  G  M  A  E  K  F  K  D  F  I  N  W  V  L  I  N  R  C  G  D  S  L  V  C  F  K  L  C  C  G  D  I  F  G  K  R  A  I  F  R  W  V  R  V  V  T  A  R  N  V  Q  E  L  V  L  D  F  C  P  A  E  P  F  E  L  P  Y  C  V  V  T  C  E  S  L  R  V  L  K  L  R  L  D  G  S  V  L  K  L  S  N  H  F  G  F  H  Q  L  K  F  L  H  L  E  K  V  E  L  S  N  E  H  L  T  S  C  L  F  S  R  L  E  K  L  V  L  D  G  C  T  F  G  T  M  T  M  L  D  I  V  S  T  S  L  V  Y  V  S  L  L  N  Y  V  N  N  V  E  A  Y  N  N  C  I  V  K  I  S  C  P  N  L  K  V  L  K  Y  G  A  P  L  A  K  D  M  I  I  E  N  L  L  S  I  E  V  V  H  I  L  F  F  Y  S  D  D  V  I  K  E  I  G  M  R  L  H  K  V  F  K  N  V  A  S  T  S  A  L  K  L  C  K  G  S  V  V  G  L  Y  S  V  F  H  G  V  R  N  F  P  V  T  F  Y  K  L  K  S  L  K  L  A  V  A  I  D  E  S  C  M  E  I  M  M  L  L  L  K  H  S  P  N  L  E  V  L  N  L  F  S  D  E  N  Y  G  W  D  E  N  W  K  F  H  D  P  S  E  S  V  L  C  L  E  S  H  L  K  L  I  Q  L  A  G  F  K  N  E  D  K  E  I  E  L  L  R  F  F  L  K  N  A  Q  V  L  E  E  L  I  I  V  W  D  S  C  S  G  I  S  E  E  A  I  E  E  V  S  N  F  P  R  A  S  S  H  V  V  V  S  F  L  N  F  K  P  K  S  R  S  R  Y  R  D  N  S  V  *  K  R  F  *  L  *  D  A  M  L  L  G  L  G  L  S  K  N  V  V  L  L  L  E  G  P  T  Y  I  *  S  V  Q  V  T  *  V  R  S  T  L  F  G  N  *  C  M  S  K  H  M  K  P  *  R  I  S  T  T  V  S  P  F  Q  R  A  L  D  R  L  Q  *  S  I  F  D  S  G  Q  R  S  I  Q  L  V  D  R  C  Y  M  R  I  Q  D  L  G  S  I  S  H  L  F  L  H  Y  M  V  V  V  D  L  *  N  V  F  Y  Y  V  F  G  L  A  *  V  M  P  Y  T  V  K  D  A  Y  E  C  F  N  H  E  E  D  L  D  V  P  A  S  I  D  V  F  G  V  F  Q  L  Q  I  T  P  P  N  Y  K  L  D  V  C  V  T  Y  L  G  *  *  T  T  *  V  M  *  I  T  *  S  L  L  *  L  L  H  L  H  D  V  F  L  N  K  T  Y  L  F  H  Q  R  E  W  I   </second_frame>
            <third_frame>   M  I  T  D  *  P  F  R  R  S  E  N  P  K  N  G  *  S  S  S  L  F  T  L  I  *  L  I  N  L  R  M  R  G  N  L  T  I  Y  L  *  S  V  L  F  S  A  F  K  S  F  K  K  W  M  I  *  C  K  N  H  *  K  P  P  I  F  *  L  Y  L  L  T  V  Q  V  K  E  L  I  E  L  A  I  C  R  M  I  Y  C  T  I  Y  F  H  I  C  T  S  L  M  L  F  S  *  A  F  Y  R  K  D  G  T  I  Y  G  G  Q  C  L  T  *  I  L  I  L  I  A  L  V  V  K  G  L  I  G  F  G  I  W  V  W  L  R  N  S  K  I  L  S  I  G  C  *  L  T  D  V  G  I  A  L  F  V  L  S  F  V  V  G  I  F  L  V  K  G  L  F  F  D  G  F  V  L  *  Q  L  E  M  F  K  N  S  C  *  I  F  V  L  L  S  H  L  S  C  H  I  V  L  *  L  V  N  P  C  E  F  *  N  Y  G  L  M  G  L  Y  L  S  C  L  I  I  L  D  F  I  S  L  N  F  F  I  L  K  K  L  S  Y  Q  T  S  I  *  R  V  A  C  S  Q  D  *  R  N  W  Y  W  M  V  V  L  L  E  L  *  L  C  L  I  L  F  Q  R  L  W  F  M  C  L  Y  *  T  M  S  I  T  *  K  L  T  T  I  V  S  S  R  F  L  A  R  I  S  R  S  *  N  M  V  L  H  W  Q  R  I  *  S  *  R  I  S  C  L  *  K  L  F  T  S  Y  F  F  I  Q  T  M  *  *  K  K  L  E  C  V  C  I  R  C  S  R  M  S  L  L  H  Q  L  *  N  Y  A  K  V  L  L  L  V  C  I  V  Y  F  M  E  *  E  T  S  R  S  R  F  I  S  S  S  P  *  N  W  Q  W  Q  L  T  N  L  A  W  K  S  *  C  Y  C  S  S  I  L  L  I  *  R  F  L  I  C  F  L  M  R  I  T  V  G  M  K  T  G  S  S  M  I  L  V  K  A  F  C  A  W  S  L  I  *  S  *  F  S  W  L  V  S  K  M  K  I  K  R  *  S  Y  *  G  F  S  S  R  M  H  K  Y  *  K  N  *  *  L  F  G  I  A  V  V  A  Y  Q  K  R  Q  *  R  R  F  P  T  F  L  E  L  L  H  M  L  L  S  H  F  L  I  S  N  P  N  Q  D  L  V  T  G  T  I  Q  F  K  R  G  S  D  C  E  T  L  C  C  L  D  L  D  S  P  K  M  L  Y  Y  F  W  K  V  R  H  T  F  E  V  S  K  *  H  R  L  E  V  P  F  L  G  T  S  A  *  A  S  T  *  S  L  N  E  F  L  L  L  F  R  L  F  K  E  H  W  T  D  F  N  E  A  Y  L  T  P  D  K  E  A  F  N  L  S  T  D  V  T  C  V  Y  K  I  *  E  V  S  V  I  S  F  C  T  I  W  L  L  L  T  S  E  T  C  F  I  M  F  S  D  S  R  R  S  C  H  T  Q  L  K  M  H  M  N  A  L  I  M  K  K  I  W  M  S  L  Q  V  L  M  F  L  V  Y  F  N  S  K  L  L  L  P  T  I  S  *  M  F  V  *  L  I  *  V  D  E  Q  L  K  S  C  K  L  L  D  L  F  C  N  F  C  I  F  M  M  F  F  S  I  K  L  T  Y  F  I  K  E  N  G  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21007" stop="19556"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1449</number_coding_nucleotides>
                  <number_encoded_amino_acids>483</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILQKMDDLMQKSLKTPDFLAVFTNSTSEGIDRISYLPDDILHNILSYLYIFDVVQLSILSKRWNYIWRTMPYLNFDINSFGCERIDRLWDMGMAEKFKDFINWVLINRCGDSLVCFKLCCGDIFGKRAIFRWVRVVTARNVQELVLDFCPAEPFELPYCVVTCESLRVLKLRLDGSVLKLSNHFGFHQLKFLHLEKVELSNEHLTSCLFSRLEKLVLDGCTFGTMTMLDIVSTSLVYVSLLNYVNNVEAYNNCIVKISCPNLKVLKYGAPLAKDMIIENLLSIEVVHILFFYSDDVIKEIGMRLHKVFKNVASTSALKLCKGSVVGLYSVFHGVRNFPVTFYKLKSLKLAVAIDESCMEIMMLLLKHSPNLEVLNLFSDENYGWDENWKFHDPSESVLCLESHLKLIQLAGFKNEDKEIELLRFFLKNAQVLEELIIVWDSCSGISEEAIEEVSNFPRASSHVVVSFLNFKPKSRSRYRDNSV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19269" stop="19060"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EVSVISFCTIWLLLTSETCFIMFSDSRRSCHTQLKMHMNALIMKKIWMSLQVLMFLVYFNSKLLLPTIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="18930" PGL_stop="19171"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18930" e_stop="19171"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.950">
            <gDNA_exon_boundary e_start="18930" e_stop="19171" e_length="242"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18930" stop="19171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397827" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCCATTCTCTTTGATGAAATAAGTAAGTTTTATTGAGAAAAACATCATGAAGATGCAAAAGTTACAAAAGAGATCAAGTAATTTACATGACTTAAGTTGTTCATCAACCTAAATAAGTTACACAAACATCTAGCTTATAGTTGGGAGGAGTAATTTGGAGTTGAAATACACCAAAAACATCAATACTTGCAGGGACATCCAGATCTTCTTCATGATTAAAGCATTCATATGCATCTTTAAC</gDNA_template>
            <first_frame> I  H  S  L  *  *  N  K  *  V  L  L  R  K  T  S  *  R  C  K  S  Y  K  R  D  Q  V  I  Y  M  T  *  V  V  H  Q  P  K  *  V  T  Q  T  S  S  L  *  L  G  G  V  I  W  S  *  N  T  P  K  T  S  I  L  A  G  T  S  R  S  S  S  *  L  K  H  S  Y  A  S  L   </first_frame>
            <second_frame>  S  I  L  F  D  E  I  S  K  F  Y  *  E  K  H  H  E  D  A  K  V  T  K  E  I  K  *  F  T  *  L  K  L  F  I  N  L  N  K  L  H  K  H  L  A  Y  S  W  E  E  *  F  G  V  E  I  H  Q  K  H  Q  Y  L  Q  G  H  P  D  L  L  H  D  *  S  I  H  M  H  L  *  </second_frame>
            <third_frame>   P  F  S  L  M  K  *  V  S  F  I  E  K  N  I  M  K  M  Q  K  L  Q  K  R  S  S  N  L  H  D  L  S  C  S  S  T  *  I  S  Y  T  N  I  *  L  I  V  G  R  S  N  L  E  L  K  Y  T  K  N  I  N  T  C  R  D  I  Q  I  F  F  M  I  K  A  F  I  C  I  F  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0168F14.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="31119" PGL_stop="23984"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31098" e_stop="30876"/>
            <exon e_start="30800" e_stop="30671"/>
            <exon e_start="29053" e_stop="28986"/>
            <exon e_start="28912" e_stop="28811"/>
            <exon e_start="28668" e_stop="28516"/>
            <exon e_start="28314" e_stop="28237"/>
            <exon e_start="28064" e_stop="27939"/>
            <exon e_start="27859" e_stop="27757"/>
            <exon e_start="26840" e_stop="26740"/>
            <exon e_start="26118" e_stop="25981"/>
            <exon e_start="25891" e_stop="25748"/>
            <exon e_start="25482" e_stop="25407"/>
            <exon e_start="25137" e_stop="25052"/>
            <exon e_start="24941" e_stop="24816"/>
            <exon e_start="24348" e_stop="23984"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.760" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.771" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.872" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="0.946" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.881" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.820" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.868" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="31098" e_stop="30876" e_length="223"/>
          </exon>
          <intron i_serial="1" don_prob="0.760" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30800" e_stop="30671" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.977">
            <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29053" e_stop="28986" e_length="68"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="0.920">
            <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28912" e_stop="28811" e_length="102"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="28668" e_stop="28516" e_length="153"/>
          </exon>
          <intron i_serial="5" don_prob="0.771" acc_prob="0.997">
            <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="28314" e_stop="28237" e_length="78"/>
          </exon>
          <intron i_serial="6" don_prob="0.970" acc_prob="0.977">
            <gDNA_intron_boundary i_start="28236" i_stop="28065" i_length="172"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="28064" e_stop="27939" e_length="126"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.976">
            <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="27859" e_stop="27757" e_length="103"/>
          </exon>
          <intron i_serial="8" don_prob="0.872" acc_prob="0.891">
            <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="26840" e_stop="26740" e_length="101"/>
          </exon>
          <intron i_serial="9" don_prob="0.946" acc_prob="0.995">
            <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="26118" e_stop="25981" e_length="138"/>
          </exon>
          <intron i_serial="10" don_prob="0.945" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="25891" e_stop="25748" e_length="144"/>
          </exon>
          <intron i_serial="11" don_prob="0.994" acc_prob="0.982">
            <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="25482" e_stop="25407" e_length="76"/>
          </exon>
          <intron i_serial="12" don_prob="0.881" acc_prob="0.948">
            <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="25137" e_stop="25052" e_length="86"/>
          </exon>
          <intron i_serial="13" don_prob="0.999" acc_prob="0.820">
            <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="24941" e_stop="24816" e_length="126"/>
          </exon>
          <intron i_serial="14" don_prob="0.998" acc_prob="0.868">
            <gDNA_intron_boundary i_start="24815" i_stop="24349" i_length="467"/>
          </intron>
          <exon e_serial="15" e_score="0.981">
            <gDNA_exon_boundary e_start="24348" e_stop="23984" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31098" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31097" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28845"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31097" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31096" stop="30876"/>
              <exon start="30800" stop="30754"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31093" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31091" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31091" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31062" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
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              <exon start="28668" stop="28516"/>
              <exon start="28314" stop="28237"/>
              <exon start="28064" stop="28042"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31060" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
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              <exon start="28314" stop="28237"/>
              <exon start="28064" stop="27939"/>
              <exon start="27859" stop="27772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553686" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31052" stop="30876"/>
              <exon start="30800" stop="30671"/>
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              <exon start="28668" stop="28603"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31033" stop="30876"/>
              <exon start="30800" stop="30671"/>
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              <exon start="28668" stop="28516"/>
              <exon start="28314" stop="28262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31027" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
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              <exon start="28668" stop="28584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30966" stop="30876"/>
              <exon start="30800" stop="30671"/>
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              <exon start="28668" stop="28516"/>
              <exon start="28314" stop="28237"/>
              <exon start="28064" stop="28045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30738" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
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              <exon start="28314" stop="28237"/>
              <exon start="28064" stop="27939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29022" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28516"/>
              <exon start="28314" stop="28237"/>
              <exon start="28064" stop="28010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28999" stop="28986"/>
              <exon start="28912" stop="28811"/>
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              <exon start="27859" stop="27757"/>
              <exon start="26840" stop="26753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28849" stop="28811"/>
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              <exon start="27859" stop="27757"/>
              <exon start="26840" stop="26758"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250623" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28623" stop="28516"/>
              <exon start="28314" stop="28237"/>
              <exon start="28064" stop="28052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28579" stop="28516"/>
              <exon start="28314" stop="28237"/>
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              <exon start="26840" stop="26748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28308" stop="28237"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28261" stop="28237"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603867" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28260" stop="28237"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27977" stop="27939"/>
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              <exon start="25137" stop="25060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27841" stop="27757"/>
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              <exon start="24348" stop="24251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27824" stop="27757"/>
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              <exon start="24941" stop="24850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27819" stop="27757"/>
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              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="24253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700344" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26055" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26028" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25131" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="23984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342207" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT : AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG : AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT : GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG : ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG : GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAG : GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG : ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG : CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG : GTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT : ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG : GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG : AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG : GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAG : GCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGCCAAGAACTGAAGTATAAGACTAGTATGTCAAACAAATTTTTGAATCTTTGACTAGCTATCTATGAGTATCAACTAGAAAAAGGAATTGTGAGCAAAAAAGGAAATGATCAACTAGAAAAGGGAAGTTCTTGACAAGATAATATATAGTACATTGTATGTACTCTCAACTATATAGTTTTGTCCCTCTTCTTGTGTAACTATTGTCTTCTTGATATATCTTATTATCTTGTAATCTTGAAAATTTCATTGTTTTTCCCACTCCTTTAA</gDNA_template>
            <first_frame> E  E  K  S  F  N  F  C  F  F  F  *  L  F  V  L  *  S  Y  H  G  S  H  C  F  F  H  F  N  Y  G  F  S  P  F  L  S  T  F  *  S  H  P  F  I  F  *  T  *  S  H  L  *  F  F  F  F  L  D  W  F  Y  S  F  S  F  I  F  F  K  K  F  I  Y   : *  G  Y  M  E  G  D  Q  F  Q  E  C  G  K  K  G  N  E  W  S  Y  *  S  *  D  V  W  A  A  H  *  R  I  G  K  C  L  E  Q  A  Q  R  R  R :   G  F  D  Q  G  K  H  R  G  T  Y  E  G  H  Q  E  G  S  F  R  S  *   : C  *  S  P  S  C  Q  K  V  C  S  V  C  *  *  R  S  R  W  H  W  F  D  S  R  C  K  T  R  S  A  T  S  *   : D  C  T  *  R  A  C  E  T  D  G  W  R  G  F  *  T  G  F  C  *  I  *  A  H  R  N  T  I  G  R  S  T  R  C  W  E  D  N  C  *  C  K  V  S  F  I  S  K  E  A   : G  *  E  L  H  A  D  C  W  R  R  V  Q  T  C  C  Y  *  P  T  C  Y  F  G  *  T   : G  *  C  T  C  L  C  S  R  N  R  C  K  T  C  R  N  S  P  T  R  I  T  R  G  Q  K  E  E  C  R  C  S  H  N  G  Y  S  W  K  T  S   : D  R  *  N  Y  D  G  *  I  K  R  R  E  T  G  T  E  P  H  R  G  F  T  C  C  G  C  N  D  W  P  R  S  C  S :   F  G  H  N  I  Q  S  R  N  W  N  Y  W  C  H  L  D  E  A  R  W  R  F  *  G  W  S  S  F  K  C  Q  G   : G  I  R  K  A  N  Q  A  R  R  K  G  *  T  Y  G  G  P  *  T  F  L  S  *  P  H  G  W  T  Y  F  R  N  G  R  C  S  I  V  C  *  E  S  P  R  S   : Y  A  S  R  R  C  *  R  F  A  E  E  D  H  E  C  K  I  *  F  Q  *  L  P  E  A  N  S  G  S  C  *  D  G  Y  H  V  A  C  Y  W  Y  D  A  W  H  G  K   : G  Y  S  C  T  N  S  R  G  R  E  E  L  K  D  N  G  V  N  D  R  C  H  D  T  R :   G  E  G  A  T  R  I  V  S  R  I  S  C  *  K  E  T  Y  R  S  R  I  W  E  N  *  A  T   : G  E  S  T  C  C  S  T  F  S  N  A  C  T  Y  E  E  F  D  G  R  Y  G  R  W  F  D  S  C  T  E  *  S  R  G  G  T  K  I  *  T  A   : G  S  S  R  Y  C  K  E  E  A  K  V  R  T  K  E  T  I  C  R  L  G  I  S  *  A  *  P  S  W  F  R  G  Q  E  L  K  Y  K  T  S  M  S  N  K  F  L  N  L  *  L  A  I  Y  E  Y  Q  L  E  K  G  I  V  S  K  K  G  N  D  Q  L  E  K  G  S  S  *  Q  D  N  I  *  Y  I  V  C  T  L  N  Y  I  V  L  S  L  F  L  C  N  Y  C  L  L  D  I  S  Y  Y  L  V  I  L  K  I  S  L  F  F  P  L  L  * </first_frame>
            <second_frame>  K  K  K  A  S  I  F  A  S  S  F  D  C  L  F  F  N  P  T  M  E  A  T  A  S  F  T  S  T  M  A  S  H  H  F  F  P  L  S  K  A  T  L  S  S  S  K  L  N  P  T  C  N  S  S  S  S  W  I  G  S  T  H  S  L  S  F  S  S  R  N  S  F  T  :  R  D  T  W  R  V  I  N  S  K  N  V  V  R  R  E  M  S  G  V  I  R  A  E  M  F  G  Q  L  T  S  G  L  E  N  A  W  N  K  L  K  G  E   : E  V  L  T  K  E  N  I  V  E  P  M  R  D  I  R  R  A  L  L  E  A  D  :  V  S  L  P  V  V  R  R  F  V  Q  S  V  S  E  E  A  V  G  T  G  L  I  R  G  V  K  P  D  Q  Q  L  V  K  :  T  V  R  D  E  L  V  K  L  M  G  G  E  V  S  E  L  V  F  A  K  S  K  P  T  V  I  L  L  A  G  L  Q  G  V  G  K  T  T  V  S  A  K  L  A  L  Y  L  K  K  Q  :  G  K  S  C  M  L  I  A  G  D  V  Y  R  P  A  A  I  D  Q  L  V  I  L  G  K  Q  :  V  D  V  P  V  Y  A  A  G  T  D  V  K  P  A  E  I  A  R  Q  G  L  Q  E  A  K  K  K  N  V  D  V  V  I  M  D  T  A  G  R  L  Q  :  I  D  K  T  M  M  D  E  L  K  D  V  K  R  V  L  N  P  T  E  V  L  L  V  V  D  A  M  T  G  Q  E  A  A   : A  L  V  T  T  F  N  L  E  I  G  I  T  G  A  I  L  T  K  L  D  G  D  S  R  G  G  A  A  L  S  V  K  E  :  V  S  G  K  P  I  K  L  V  G  R  G  E  R  M  E  D  L  E  P  F  Y  P  D  R  M  A  G  R  I  L  G  M  G  D  V  L  S  F  V  E  K  A  Q  E  V  :  M  R  Q  E  D  A  E  D  L  Q  K  K  I  M  S  A  K  F  D  F  N  D  F  L  K  Q  T  R  A  V  A  R  M  G  T  M  S  R  V  I  G  M  M  P  G  M  G  K  :  V  T  P  A  Q  I  R  E  A  E  K  S  L  K  I  M  E  S  M  I  D  V  M  T  P   : E  E  R  E  Q  P  E  L  L  A  E  S  P  A  R  R  K  R  I  A  Q  E  S  G  K  T  E  Q  Q  :  V  S  Q  L  V  A  Q  L  F  Q  M  R  V  R  M  K  N  L  M  G  V  M  E  G  G  S  I  P  A  L  S  N  L  E  E  A  L  K  S  E  Q  Q  :  A  P  P  G  T  A  R  R  K  R  R  S  E  P  R  K  Q  F  A  D  S  G  S  A  R  P  S  P  R  G  F  G  A  K  N  *  S  I  R  L  V  C  Q  T  N  F  *  I  F  D  *  L  S  M  S  I  N  *  K  K  E  L  *  A  K  K  E  M  I  N  *  K  R  E  V  L  D  K  I  I  Y  S  T  L  Y  V  L  S  T  I  *  F  C  P  S  S  C  V  T  I  V  F  L  I  Y  L  I  I  L  *  S  *  K  F  H  C  F  S  H  S  F   </second_frame>
            <third_frame>   R  K  K  L  Q  F  L  L  L  L  L  I  V  C  S  L  I  L  P  W  K  P  L  L  L  S  L  Q  L  W  L  L  T  I  S  F  H  F  L  K  P  P  F  H  L  L  N  L  I  P  L  V  I  L  L  L  L  G  L  V  L  L  I  L  F  H  F  L  Q  E  I  H  L  L :   G  I  H  G  G  *  S  I  P  R  M  W  *  E  G  K  *  V  E  L  L  E  L  R  C  L  G  S  S  L  A  D  W  K  M  L  G  T  S  S  K  E  K  :  R  F  *  P  R  K  T  S  W  N  L  *  G  T  S  G  G  L  F  *  K  L  M :   L  V  S  Q  L  S  E  G  L  F  S  L  L  V  K  K  P  L  A  L  V  *  F  E  V  *  N  Q  I  S  N  *  L  R :   L  Y  V  T  S  L  *  N  *  W  V  E  R  F  L  N  W  F  L  L  N  L  S  P  P  *  Y  Y  W  P  V  Y  K  V  L  G  R  Q  L  L  V  Q  S  *  L  Y  I  *  R  S  R :   V  R  V  A  C  *  L  L  E  T  C  T  D  L  L  L  L  T  N  L  L  F  W  V  N  R :   L  M  Y  L  F  M  Q  Q  E  Q  M  *  N  L  Q  K  *  P  D  K  D  Y  K  R  P  K  R  R  M  *  M  *  S  *  W  I  Q  L  E  D  F  R :   *  I  K  L  *  W  M  N  *  K  T  *  N  G  Y  *  T  P  Q  R  F  Y  L  L  W  M  Q  *  L  A  K  K  L  Q  :  L  W  S  Q  H  S  I  S  K  L  E  L  L  V  P  S  *  R  S  *  M  E  I  L  G  V  E  Q  L  *  V  S  R  R :   Y  Q  E  S  Q  S  S  S  *  E  G  V  N  V  W  R  T  L  N  L  S  I  L  T  A  W  L  D  V  F  *  E  W  E  M  F  Y  R  L  L  R  K  P  K  K  L :   C  V  K  K  M  L  K  I  C  R  R  R  S  *  V  Q  N  L  I  S  M  T  S  *  S  K  L  G  Q  L  L  G  W  V  P  C  R  V  L  L  V  *  C  L  A  W  E  R :   L  L  L  H  K  F  E  R  Q  R  R  A  *  R  *  W  S  Q  *  *  M  S  *  H  Q  :  R  R  G  S  N  Q  N  C  *  Q  N  L  L  L  E  G  N  V  S  L  K  N  L  G  K  L  S  N  R :   *  V  N  L  L  L  N  F  F  K  C  V  Y  V  *  R  I  *  W  A  L  W  K  V  V  R  F  L  H  *  V  I  *  R  R  H  *  N  L  N  S  R :   L  L  P  V  L  Q  G  G  S  E  G  Q  N  Q  G  N  N  L  Q  T  R  D  Q  L  G  L  A  L  V  V  S  G  P  R  T  E  V  *  D  *  Y  V  K  Q  I  F  E  S  L  T  S  Y  L  *  V  S  T  R  K  R  N  C  E  Q  K  R  K  *  S  T  R  K  G  K  F  L  T  R  *  Y  I  V  H  C  M  Y  S  Q  L  Y  S  F  V  P  L  L  V  *  L  L  S  S  *  Y  I  L  L  S  C  N  L  E  N  F  I  V  F  P  T  P  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31097" stop="30876"/>
                    <exon start="30800" stop="30671"/>
                    <exon start="29053" stop="28986"/>
                    <exon start="28912" stop="28811"/>
                    <exon start="28668" stop="28516"/>
                    <exon start="28314" stop="28237"/>
                    <exon start="28064" stop="27939"/>
                    <exon start="27859" stop="27757"/>
                    <exon start="26840" stop="26740"/>
                    <exon start="26118" stop="25981"/>
                    <exon start="25891" stop="25748"/>
                    <exon start="25482" stop="25407"/>
                    <exon start="25137" stop="25052"/>
                    <exon start="24941" stop="24816"/>
                    <exon start="24348" stop="24241"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1758</number_coding_nucleotides>
                  <number_encoded_amino_acids>586</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKKASIFASSFDCLFFNPTMEATASFTSTMASHHFFPLSKATLSSSKLNPTCNSSSSWIGSTHSLSFSSRNSFTRDTWRVINSKNVVRREMSGVIRAEMFGQLTSGLENAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQSVSEEAVGTGLIRGVKPDQQLVKTVRDELVKLMGGEVSELVFAKSKPTVILLAGLQGVGKTTVSAKLALYLKKQGKSCMLIAGDVYRPAAIDQLVILGKQVDVPVYAAGTDVKPAEIARQGLQEAKKKNVDVVIMDTAGRLQIDKTMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVARMGTMSRVIGMMPGMGKVTPAQIREAEKSLKIMESMIDVMTPEEREQPELLAESPARRKRIAQESGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEEALKSEQQAPPGTARRKRRSEPRKQFADSGSARPSPRGFGAKN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="31098" e_stop="30876"/>
            <exon e_start="30800" e_stop="30671"/>
            <exon e_start="29053" e_stop="28986"/>
            <exon e_start="28912" e_stop="28811"/>
            <exon e_start="28668" e_stop="28516"/>
            <exon e_start="28314" e_stop="28237"/>
            <exon e_start="28075" e_stop="27939"/>
            <exon e_start="27859" e_stop="27757"/>
            <exon e_start="26840" e_stop="26740"/>
            <exon e_start="26118" e_stop="25981"/>
            <exon e_start="25891" e_stop="25748"/>
            <exon e_start="25482" e_stop="25407"/>
            <exon e_start="25137" e_stop="25052"/>
            <exon e_start="24941" e_stop="24816"/>
            <exon e_start="24348" e_stop="23984"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.760" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.771" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.515" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.872" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="0.946" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.881" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.820" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.868" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="31098" e_stop="30876" e_length="223"/>
          </exon>
          <intron i_serial="1" don_prob="0.760" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30800" e_stop="30671" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.977">
            <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29053" e_stop="28986" e_length="68"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="0.920">
            <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28912" e_stop="28811" e_length="102"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="28668" e_stop="28516" e_length="153"/>
          </exon>
          <intron i_serial="5" don_prob="0.771" acc_prob="0.997">
            <gDNA_intron_boundary i_start="28515" i_stop="28315" i_length="201"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="28314" e_stop="28237" e_length="78"/>
          </exon>
          <intron i_serial="6" don_prob="0.970" acc_prob="0.515">
            <gDNA_intron_boundary i_start="28236" i_stop="28076" i_length="161"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="28075" e_stop="27939" e_length="137"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.976">
            <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="27859" e_stop="27757" e_length="103"/>
          </exon>
          <intron i_serial="8" don_prob="0.872" acc_prob="0.891">
            <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="26840" e_stop="26740" e_length="101"/>
          </exon>
          <intron i_serial="9" don_prob="0.946" acc_prob="0.995">
            <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="26118" e_stop="25981" e_length="138"/>
          </exon>
          <intron i_serial="10" don_prob="0.945" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="25891" e_stop="25748" e_length="144"/>
          </exon>
          <intron i_serial="11" don_prob="0.994" acc_prob="0.982">
            <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="25482" e_stop="25407" e_length="76"/>
          </exon>
          <intron i_serial="12" don_prob="0.881" acc_prob="0.948">
            <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="25137" e_stop="25052" e_length="86"/>
          </exon>
          <intron i_serial="13" don_prob="0.999" acc_prob="0.820">
            <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="24941" e_stop="24816" e_length="126"/>
          </exon>
          <intron i_serial="14" don_prob="0.998" acc_prob="0.868">
            <gDNA_intron_boundary i_start="24815" i_stop="24349" i_length="467"/>
          </intron>
          <exon e_serial="15" e_score="0.981">
            <gDNA_exon_boundary e_start="24348" e_stop="23984" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31098" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31097" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28845"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31097" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31096" stop="30876"/>
              <exon start="30800" stop="30754"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31093" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31091" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31091" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31052" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28603"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31033" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28516"/>
              <exon start="28314" stop="28262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31027" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28564" stop="28516"/>
              <exon start="28314" stop="28237"/>
              <exon start="28075" stop="27939"/>
              <exon start="27859" stop="27757"/>
              <exon start="26840" stop="26803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27977" stop="27939"/>
              <exon start="27859" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27841" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="24251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27824" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27819" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="24253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700344" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26055" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26028" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25131" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="23984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342207" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT : AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG : AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT : GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG : ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG : GGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAG : TGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG : ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG : CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG : GTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT : ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG : GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG : AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG : GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAG : GCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGCCAAGAACTGAAGTATAAGACTAGTATGTCAAACAAATTTTTGAATCTTTGACTAGCTATCTATGAGTATCAACTAGAAAAAGGAATTGTGAGCAAAAAAGGAAATGATCAACTAGAAAAGGGAAGTTCTTGACAAGATAATATATAGTACATTGTATGTACTCTCAACTATATAGTTTTGTCCCTCTTCTTGTGTAACTATTGTCTTCTTGATATATCTTATTATCTTGTAATCTTGAAAATTTCATTGTTTTTCCCACTCCTTTAA</gDNA_template>
            <first_frame> E  E  K  S  F  N  F  C  F  F  F  *  L  F  V  L  *  S  Y  H  G  S  H  C  F  F  H  F  N  Y  G  F  S  P  F  L  S  T  F  *  S  H  P  F  I  F  *  T  *  S  H  L  *  F  F  F  F  L  D  W  F  Y  S  F  S  F  I  F  F  K  K  F  I  Y   : *  G  Y  M  E  G  D  Q  F  Q  E  C  G  K  K  G  N  E  W  S  Y  *  S  *  D  V  W  A  A  H  *  R  I  G  K  C  L  E  Q  A  Q  R  R  R :   G  F  D  Q  G  K  H  R  G  T  Y  E  G  H  Q  E  G  S  F  R  S  *   : C  *  S  P  S  C  Q  K  V  C  S  V  C  *  *  R  S  R  W  H  W  F  D  S  R  C  K  T  R  S  A  T  S  *   : D  C  T  *  R  A  C  E  T  D  G  W  R  G  F  *  T  G  F  C  *  I  *  A  H  R  N  T  I  G  R  S  T  R  C  W  E  D  N  C  *  C  K  V  S  F  I  S  K  E  A   : G  *  E  L  H  A  D  C  W  R  R  V  Q  T  C  C  Y  *  P  T  C  Y  F  G  *  T   : V  G  E  Q  V  D  V  P  V  Y  A  A  G  T  D  V  K  P  A  E  I  A  R  Q  G  L  Q  E  A  K  K  K  N  V  D  V  V  I  M  D  T  A  G  R  L  Q  :  I  D  K  T  M  M  D  E  L  K  D  V  K  R  V  L  N  P  T  E  V  L  L  V  V  D  A  M  T  G  Q  E  A  A   : A  L  V  T  T  F  N  L  E  I  G  I  T  G  A  I  L  T  K  L  D  G  D  S  R  G  G  A  A  L  S  V  K  E  :  V  S  G  K  P  I  K  L  V  G  R  G  E  R  M  E  D  L  E  P  F  Y  P  D  R  M  A  G  R  I  L  G  M  G  D  V  L  S  F  V  E  K  A  Q  E  V  :  M  R  Q  E  D  A  E  D  L  Q  K  K  I  M  S  A  K  F  D  F  N  D  F  L  K  Q  T  R  A  V  A  R  M  G  T  M  S  R  V  I  G  M  M  P  G  M  G  K  :  V  T  P  A  Q  I  R  E  A  E  K  S  L  K  I  M  E  S  M  I  D  V  M  T  P   : E  E  R  E  Q  P  E  L  L  A  E  S  P  A  R  R  K  R  I  A  Q  E  S  G  K  T  E  Q  Q  :  V  S  Q  L  V  A  Q  L  F  Q  M  R  V  R  M  K  N  L  M  G  V  M  E  G  G  S  I  P  A  L  S  N  L  E  E  A  L  K  S  E  Q  Q  :  A  P  P  G  T  A  R  R  K  R  R  S  E  P  R  K  Q  F  A  D  S  G  S  A  R  P  S  P  R  G  F  G  A  K  N  *  S  I  R  L  V  C  Q  T  N  F  *  I  F  D  *  L  S  M  S  I  N  *  K  K  E  L  *  A  K  K  E  M  I  N  *  K  R  E  V  L  D  K  I  I  Y  S  T  L  Y  V  L  S  T  I  *  F  C  P  S  S  C  V  T  I  V  F  L  I  Y  L  I  I  L  *  S  *  K  F  H  C  F  S  H  S  F   </first_frame>
            <second_frame>  K  K  K  A  S  I  F  A  S  S  F  D  C  L  F  F  N  P  T  M  E  A  T  A  S  F  T  S  T  M  A  S  H  H  F  F  P  L  S  K  A  T  L  S  S  S  K  L  N  P  T  C  N  S  S  S  S  W  I  G  S  T  H  S  L  S  F  S  S  R  N  S  F  T  :  R  D  T  W  R  V  I  N  S  K  N  V  V  R  R  E  M  S  G  V  I  R  A  E  M  F  G  Q  L  T  S  G  L  E  N  A  W  N  K  L  K  G  E   : E  V  L  T  K  E  N  I  V  E  P  M  R  D  I  R  R  A  L  L  E  A  D  :  V  S  L  P  V  V  R  R  F  V  Q  S  V  S  E  E  A  V  G  T  G  L  I  R  G  V  K  P  D  Q  Q  L  V  K  :  T  V  R  D  E  L  V  K  L  M  G  G  E  V  S  E  L  V  F  A  K  S  K  P  T  V  I  L  L  A  G  L  Q  G  V  G  K  T  T  V  S  A  K  L  A  L  Y  L  K  K  Q  :  G  K  S  C  M  L  I  A  G  D  V  Y  R  P  A  A  I  D  Q  L  V  I  L  G  K  Q  :  W  G  N  R  L  M  Y  L  F  M  Q  Q  E  Q  M  *  N  L  Q  K  *  P  D  K  D  Y  K  R  P  K  R  R  M  *  M  *  S  *  W  I  Q  L  E  D  F  R :   *  I  K  L  *  W  M  N  *  K  T  *  N  G  Y  *  T  P  Q  R  F  Y  L  L  W  M  Q  *  L  A  K  K  L  Q  :  L  W  S  Q  H  S  I  S  K  L  E  L  L  V  P  S  *  R  S  *  M  E  I  L  G  V  E  Q  L  *  V  S  R  R :   Y  Q  E  S  Q  S  S  S  *  E  G  V  N  V  W  R  T  L  N  L  S  I  L  T  A  W  L  D  V  F  *  E  W  E  M  F  Y  R  L  L  R  K  P  K  K  L :   C  V  K  K  M  L  K  I  C  R  R  R  S  *  V  Q  N  L  I  S  M  T  S  *  S  K  L  G  Q  L  L  G  W  V  P  C  R  V  L  L  V  *  C  L  A  W  E  R :   L  L  L  H  K  F  E  R  Q  R  R  A  *  R  *  W  S  Q  *  *  M  S  *  H  Q  :  R  R  G  S  N  Q  N  C  *  Q  N  L  L  L  E  G  N  V  S  L  K  N  L  G  K  L  S  N  R :   *  V  N  L  L  L  N  F  F  K  C  V  Y  V  *  R  I  *  W  A  L  W  K  V  V  R  F  L  H  *  V  I  *  R  R  H  *  N  L  N  S  R :   L  L  P  V  L  Q  G  G  S  E  G  Q  N  Q  G  N  N  L  Q  T  R  D  Q  L  G  L  A  L  V  V  S  G  P  R  T  E  V  *  D  *  Y  V  K  Q  I  F  E  S  L  T  S  Y  L  *  V  S  T  R  K  R  N  C  E  Q  K  R  K  *  S  T  R  K  G  K  F  L  T  R  *  Y  I  V  H  C  M  Y  S  Q  L  Y  S  F  V  P  L  L  V  *  L  L  S  S  *  Y  I  L  L  S  C  N  L  E  N  F  I  V  F  P  T  P  L  </second_frame>
            <third_frame>   R  K  K  L  Q  F  L  L  L  L  L  I  V  C  S  L  I  L  P  W  K  P  L  L  L  S  L  Q  L  W  L  L  T  I  S  F  H  F  L  K  P  P  F  H  L  L  N  L  I  P  L  V  I  L  L  L  L  G  L  V  L  L  I  L  F  H  F  L  Q  E  I  H  L  L :   G  I  H  G  G  *  S  I  P  R  M  W  *  E  G  K  *  V  E  L  L  E  L  R  C  L  G  S  S  L  A  D  W  K  M  L  G  T  S  S  K  E  K  :  R  F  *  P  R  K  T  S  W  N  L  *  G  T  S  G  G  L  F  *  K  L  M :   L  V  S  Q  L  S  E  G  L  F  S  L  L  V  K  K  P  L  A  L  V  *  F  E  V  *  N  Q  I  S  N  *  L  R :   L  Y  V  T  S  L  *  N  *  W  V  E  R  F  L  N  W  F  L  L  N  L  S  P  P  *  Y  Y  W  P  V  Y  K  V  L  G  R  Q  L  L  V  Q  S  *  L  Y  I  *  R  S  R :   V  R  V  A  C  *  L  L  E  T  C  T  D  L  L  L  L  T  N  L  L  F  W  V  N  S :   G  G  T  G  *  C  T  C  L  C  S  R  N  R  C  K  T  C  R  N  S  P  T  R  I  T  R  G  Q  K  E  E  C  R  C  S  H  N  G  Y  S  W  K  T  S   : D  R  *  N  Y  D  G  *  I  K  R  R  E  T  G  T  E  P  H  R  G  F  T  C  C  G  C  N  D  W  P  R  S  C  S :   F  G  H  N  I  Q  S  R  N  W  N  Y  W  C  H  L  D  E  A  R  W  R  F  *  G  W  S  S  F  K  C  Q  G   : G  I  R  K  A  N  Q  A  R  R  K  G  *  T  Y  G  G  P  *  T  F  L  S  *  P  H  G  W  T  Y  F  R  N  G  R  C  S  I  V  C  *  E  S  P  R  S   : Y  A  S  R  R  C  *  R  F  A  E  E  D  H  E  C  K  I  *  F  Q  *  L  P  E  A  N  S  G  S  C  *  D  G  Y  H  V  A  C  Y  W  Y  D  A  W  H  G  K   : G  Y  S  C  T  N  S  R  G  R  E  E  L  K  D  N  G  V  N  D  R  C  H  D  T  R :   G  E  G  A  T  R  I  V  S  R  I  S  C  *  K  E  T  Y  R  S  R  I  W  E  N  *  A  T   : G  E  S  T  C  C  S  T  F  S  N  A  C  T  Y  E  E  F  D  G  R  Y  G  R  W  F  D  S  C  T  E  *  S  R  G  G  T  K  I  *  T  A   : G  S  S  R  Y  C  K  E  E  A  K  V  R  T  K  E  T  I  C  R  L  G  I  S  *  A  *  P  S  W  F  R  G  Q  E  L  K  Y  K  T  S  M  S  N  K  F  L  N  L  *  L  A  I  Y  E  Y  Q  L  E  K  G  I  V  S  K  K  G  N  D  Q  L  E  K  G  S  S  *  Q  D  N  I  *  Y  I  V  C  T  L  N  Y  I  V  L  S  L  F  L  C  N  Y  C  L  L  D  I  S  Y  Y  L  V  I  L  K  I  S  L  F  F  P  L  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28240" stop="28237"/>
                    <exon start="28075" stop="27939"/>
                    <exon start="27859" stop="27757"/>
                    <exon start="26840" stop="26740"/>
                    <exon start="26118" stop="25981"/>
                    <exon start="25891" stop="25748"/>
                    <exon start="25482" stop="25407"/>
                    <exon start="25137" stop="25052"/>
                    <exon start="24941" stop="24816"/>
                    <exon start="24348" stop="24241"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1020</number_coding_nucleotides>
                  <number_encoded_amino_acids>340</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TVGEQVDVPVYAAGTDVKPAEIARQGLQEAKKKNVDVVIMDTAGRLQIDKTMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVARMGTMSRVIGMMPGMGKVTPAQIREAEKSLKIMESMIDVMTPEEREQPELLAESPARRKRIAQESGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEEALKSEQQAPPGTARRKRRSEPRKQFADSGSARPSPRGFGAKN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31096" stop="30876"/>
                    <exon start="30800" stop="30782"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKKLQFLLLLLIVCSLILPWKPLLLSLQLWLLTISFHFLKPPFHLLNLIPLVILLLLGLVLLILFHFLQEIHLLGIHGG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="31119" e_stop="30876"/>
            <exon e_start="30800" e_stop="30671"/>
            <exon e_start="29053" e_stop="28986"/>
            <exon e_start="28912" e_stop="28811"/>
            <exon e_start="28668" e_stop="28516"/>
            <exon e_start="28064" e_stop="27939"/>
            <exon e_start="27859" e_stop="27757"/>
            <exon e_start="26840" e_stop="26740"/>
            <exon e_start="26118" e_stop="25981"/>
            <exon e_start="25891" e_stop="25748"/>
            <exon e_start="25482" e_stop="25407"/>
            <exon e_start="25137" e_stop="25052"/>
            <exon e_start="24941" e_stop="24816"/>
            <exon e_start="24348" e_stop="23984"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.760" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.771" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.872" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="0.946" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.881" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.820" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.868" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="31119" e_stop="30876" e_length="244"/>
          </exon>
          <intron i_serial="1" don_prob="0.760" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30800" e_stop="30671" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.977">
            <gDNA_intron_boundary i_start="30670" i_stop="29054" i_length="1617"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29053" e_stop="28986" e_length="68"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="0.920">
            <gDNA_intron_boundary i_start="28985" i_stop="28913" i_length="73"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28912" e_stop="28811" e_length="102"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="28810" i_stop="28669" i_length="142"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="28668" e_stop="28516" e_length="153"/>
          </exon>
          <intron i_serial="5" don_prob="0.771" acc_prob="0.977">
            <gDNA_intron_boundary i_start="28515" i_stop="28065" i_length="451"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="28064" e_stop="27939" e_length="126"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.976">
            <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="27859" e_stop="27757" e_length="103"/>
          </exon>
          <intron i_serial="7" don_prob="0.872" acc_prob="0.891">
            <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="26840" e_stop="26740" e_length="101"/>
          </exon>
          <intron i_serial="8" don_prob="0.946" acc_prob="0.995">
            <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="26118" e_stop="25981" e_length="138"/>
          </exon>
          <intron i_serial="9" don_prob="0.945" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="25891" e_stop="25748" e_length="144"/>
          </exon>
          <intron i_serial="10" don_prob="0.994" acc_prob="0.982">
            <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="25482" e_stop="25407" e_length="76"/>
          </exon>
          <intron i_serial="11" don_prob="0.881" acc_prob="0.948">
            <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="25137" e_stop="25052" e_length="86"/>
          </exon>
          <intron i_serial="12" don_prob="0.999" acc_prob="0.820">
            <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="24941" e_stop="24816" e_length="126"/>
          </exon>
          <intron i_serial="13" don_prob="0.998" acc_prob="0.868">
            <gDNA_intron_boundary i_start="24815" i_stop="24349" i_length="467"/>
          </intron>
          <exon e_serial="14" e_score="0.981">
            <gDNA_exon_boundary e_start="24348" e_stop="23984" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31119" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28516"/>
              <exon start="28064" stop="27939"/>
              <exon start="27859" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="24058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745524" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31098" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31097" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28845"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31097" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31096" stop="30876"/>
              <exon start="30800" stop="30754"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31093" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31091" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31091" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31052" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28603"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31027" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29053" stop="28986"/>
              <exon start="28912" stop="28811"/>
              <exon start="28668" stop="28584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27977" stop="27939"/>
              <exon start="27859" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27841" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="24251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27824" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27819" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="24253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700344" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26055" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26028" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25131" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="23984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342207" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATGGATAAAGCATAAAAGAAGAAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT : AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG : AGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCTGAT : GTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAG : ACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAG : GTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG : ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG : CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG : GTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT : ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG : GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG : AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG : GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAG : GCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGCCAAGAACTGAAGTATAAGACTAGTATGTCAAACAAATTTTTGAATCTTTGACTAGCTATCTATGAGTATCAACTAGAAAAAGGAATTGTGAGCAAAAAAGGAAATGATCAACTAGAAAAGGGAAGTTCTTGACAAGATAATATATAGTACATTGTATGTACTCTCAACTATATAGTTTTGTCCCTCTTCTTGTGTAACTATTGTCTTCTTGATATATCTTATTATCTTGTAATCTTGAAAATTTCATTGTTTTTCCCACTCCTTTAA</gDNA_template>
            <first_frame> N  G  *  S  I  K  E  E  E  K  S  F  N  F  C  F  F  F  *  L  F  V  L  *  S  Y  H  G  S  H  C  F  F  H  F  N  Y  G  F  S  P  F  L  S  T  F  *  S  H  P  F  I  F  *  T  *  S  H  L  *  F  F  F  F  L  D  W  F  Y  S  F  S  F  I  F  F  K  K  F  I  Y   : *  G  Y  M  E  G  D  Q  F  Q  E  C  G  K  K  G  N  E  W  S  Y  *  S  *  D  V  W  A  A  H  *  R  I  G  K  C  L  E  Q  A  Q  R  R  R :   G  F  D  Q  G  K  H  R  G  T  Y  E  G  H  Q  E  G  S  F  R  S  *   : C  *  S  P  S  C  Q  K  V  C  S  V  C  *  *  R  S  R  W  H  W  F  D  S  R  C  K  T  R  S  A  T  S  *   : D  C  T  *  R  A  C  E  T  D  G  W  R  G  F  *  T  G  F  C  *  I  *  A  H  R  N  T  I  G  R  S  T  R  C  W  E  D  N  C  *  C  K  V  S  F  I  S  K  E  A   : G  *  C  T  C  L  C  S  R  N  R  C  K  T  C  R  N  S  P  T  R  I  T  R  G  Q  K  E  E  C  R  C  S  H  N  G  Y  S  W  K  T  S   : D  R  *  N  Y  D  G  *  I  K  R  R  E  T  G  T  E  P  H  R  G  F  T  C  C  G  C  N  D  W  P  R  S  C  S :   F  G  H  N  I  Q  S  R  N  W  N  Y  W  C  H  L  D  E  A  R  W  R  F  *  G  W  S  S  F  K  C  Q  G   : G  I  R  K  A  N  Q  A  R  R  K  G  *  T  Y  G  G  P  *  T  F  L  S  *  P  H  G  W  T  Y  F  R  N  G  R  C  S  I  V  C  *  E  S  P  R  S   : Y  A  S  R  R  C  *  R  F  A  E  E  D  H  E  C  K  I  *  F  Q  *  L  P  E  A  N  S  G  S  C  *  D  G  Y  H  V  A  C  Y  W  Y  D  A  W  H  G  K   : G  Y  S  C  T  N  S  R  G  R  E  E  L  K  D  N  G  V  N  D  R  C  H  D  T  R :   G  E  G  A  T  R  I  V  S  R  I  S  C  *  K  E  T  Y  R  S  R  I  W  E  N  *  A  T   : G  E  S  T  C  C  S  T  F  S  N  A  C  T  Y  E  E  F  D  G  R  Y  G  R  W  F  D  S  C  T  E  *  S  R  G  G  T  K  I  *  T  A   : G  S  S  R  Y  C  K  E  E  A  K  V  R  T  K  E  T  I  C  R  L  G  I  S  *  A  *  P  S  W  F  R  G  Q  E  L  K  Y  K  T  S  M  S  N  K  F  L  N  L  *  L  A  I  Y  E  Y  Q  L  E  K  G  I  V  S  K  K  G  N  D  Q  L  E  K  G  S  S  *  Q  D  N  I  *  Y  I  V  C  T  L  N  Y  I  V  L  S  L  F  L  C  N  Y  C  L  L  D  I  S  Y  Y  L  V  I  L  K  I  S  L  F  F  P  L  L  * </first_frame>
            <second_frame>  M  D  K  A  *  K  K  K  K  K  A  S  I  F  A  S  S  F  D  C  L  F  F  N  P  T  M  E  A  T  A  S  F  T  S  T  M  A  S  H  H  F  F  P  L  S  K  A  T  L  S  S  S  K  L  N  P  T  C  N  S  S  S  S  W  I  G  S  T  H  S  L  S  F  S  S  R  N  S  F  T  :  R  D  T  W  R  V  I  N  S  K  N  V  V  R  R  E  M  S  G  V  I  R  A  E  M  F  G  Q  L  T  S  G  L  E  N  A  W  N  K  L  K  G  E   : E  V  L  T  K  E  N  I  V  E  P  M  R  D  I  R  R  A  L  L  E  A  D  :  V  S  L  P  V  V  R  R  F  V  Q  S  V  S  E  E  A  V  G  T  G  L  I  R  G  V  K  P  D  Q  Q  L  V  K  :  T  V  R  D  E  L  V  K  L  M  G  G  E  V  S  E  L  V  F  A  K  S  K  P  T  V  I  L  L  A  G  L  Q  G  V  G  K  T  T  V  S  A  K  L  A  L  Y  L  K  K  Q  :  V  D  V  P  V  Y  A  A  G  T  D  V  K  P  A  E  I  A  R  Q  G  L  Q  E  A  K  K  K  N  V  D  V  V  I  M  D  T  A  G  R  L  Q  :  I  D  K  T  M  M  D  E  L  K  D  V  K  R  V  L  N  P  T  E  V  L  L  V  V  D  A  M  T  G  Q  E  A  A   : A  L  V  T  T  F  N  L  E  I  G  I  T  G  A  I  L  T  K  L  D  G  D  S  R  G  G  A  A  L  S  V  K  E  :  V  S  G  K  P  I  K  L  V  G  R  G  E  R  M  E  D  L  E  P  F  Y  P  D  R  M  A  G  R  I  L  G  M  G  D  V  L  S  F  V  E  K  A  Q  E  V  :  M  R  Q  E  D  A  E  D  L  Q  K  K  I  M  S  A  K  F  D  F  N  D  F  L  K  Q  T  R  A  V  A  R  M  G  T  M  S  R  V  I  G  M  M  P  G  M  G  K  :  V  T  P  A  Q  I  R  E  A  E  K  S  L  K  I  M  E  S  M  I  D  V  M  T  P   : E  E  R  E  Q  P  E  L  L  A  E  S  P  A  R  R  K  R  I  A  Q  E  S  G  K  T  E  Q  Q  :  V  S  Q  L  V  A  Q  L  F  Q  M  R  V  R  M  K  N  L  M  G  V  M  E  G  G  S  I  P  A  L  S  N  L  E  E  A  L  K  S  E  Q  Q  :  A  P  P  G  T  A  R  R  K  R  R  S  E  P  R  K  Q  F  A  D  S  G  S  A  R  P  S  P  R  G  F  G  A  K  N  *  S  I  R  L  V  C  Q  T  N  F  *  I  F  D  *  L  S  M  S  I  N  *  K  K  E  L  *  A  K  K  E  M  I  N  *  K  R  E  V  L  D  K  I  I  Y  S  T  L  Y  V  L  S  T  I  *  F  C  P  S  S  C  V  T  I  V  F  L  I  Y  L  I  I  L  *  S  *  K  F  H  C  F  S  H  S  F   </second_frame>
            <third_frame>   W  I  K  H  K  R  R  R  K  K  L  Q  F  L  L  L  L  L  I  V  C  S  L  I  L  P  W  K  P  L  L  L  S  L  Q  L  W  L  L  T  I  S  F  H  F  L  K  P  P  F  H  L  L  N  L  I  P  L  V  I  L  L  L  L  G  L  V  L  L  I  L  F  H  F  L  Q  E  I  H  L  L :   G  I  H  G  G  *  S  I  P  R  M  W  *  E  G  K  *  V  E  L  L  E  L  R  C  L  G  S  S  L  A  D  W  K  M  L  G  T  S  S  K  E  K  :  R  F  *  P  R  K  T  S  W  N  L  *  G  T  S  G  G  L  F  *  K  L  M :   L  V  S  Q  L  S  E  G  L  F  S  L  L  V  K  K  P  L  A  L  V  *  F  E  V  *  N  Q  I  S  N  *  L  R :   L  Y  V  T  S  L  *  N  *  W  V  E  R  F  L  N  W  F  L  L  N  L  S  P  P  *  Y  Y  W  P  V  Y  K  V  L  G  R  Q  L  L  V  Q  S  *  L  Y  I  *  R  S  R :   L  M  Y  L  F  M  Q  Q  E  Q  M  *  N  L  Q  K  *  P  D  K  D  Y  K  R  P  K  R  R  M  *  M  *  S  *  W  I  Q  L  E  D  F  R :   *  I  K  L  *  W  M  N  *  K  T  *  N  G  Y  *  T  P  Q  R  F  Y  L  L  W  M  Q  *  L  A  K  K  L  Q  :  L  W  S  Q  H  S  I  S  K  L  E  L  L  V  P  S  *  R  S  *  M  E  I  L  G  V  E  Q  L  *  V  S  R  R :   Y  Q  E  S  Q  S  S  S  *  E  G  V  N  V  W  R  T  L  N  L  S  I  L  T  A  W  L  D  V  F  *  E  W  E  M  F  Y  R  L  L  R  K  P  K  K  L :   C  V  K  K  M  L  K  I  C  R  R  R  S  *  V  Q  N  L  I  S  M  T  S  *  S  K  L  G  Q  L  L  G  W  V  P  C  R  V  L  L  V  *  C  L  A  W  E  R :   L  L  L  H  K  F  E  R  Q  R  R  A  *  R  *  W  S  Q  *  *  M  S  *  H  Q  :  R  R  G  S  N  Q  N  C  *  Q  N  L  L  L  E  G  N  V  S  L  K  N  L  G  K  L  S  N  R :   *  V  N  L  L  L  N  F  F  K  C  V  Y  V  *  R  I  *  W  A  L  W  K  V  V  R  F  L  H  *  V  I  *  R  R  H  *  N  L  N  S  R :   L  L  P  V  L  Q  G  G  S  E  G  Q  N  Q  G  N  N  L  Q  T  R  D  Q  L  G  L  A  L  V  V  S  G  P  R  T  E  V  *  D  *  Y  V  K  Q  I  F  E  S  L  T  S  Y  L  *  V  S  T  R  K  R  N  C  E  Q  K  R  K  *  S  T  R  K  G  K  F  L  T  R  *  Y  I  V  H  C  M  Y  S  Q  L  Y  S  F  V  P  L  L  V  *  L  L  S  S  *  Y  I  L  L  S  C  N  L  E  N  F  I  V  F  P  T  P  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31103" stop="30876"/>
                    <exon start="30800" stop="30671"/>
                    <exon start="29053" stop="28986"/>
                    <exon start="28912" stop="28811"/>
                    <exon start="28668" stop="28516"/>
                    <exon start="28064" stop="27939"/>
                    <exon start="27859" stop="27757"/>
                    <exon start="26840" stop="26740"/>
                    <exon start="26118" stop="25981"/>
                    <exon start="25891" stop="25748"/>
                    <exon start="25482" stop="25407"/>
                    <exon start="25137" stop="25052"/>
                    <exon start="24941" stop="24816"/>
                    <exon start="24348" stop="24241"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1686</number_coding_nucleotides>
                  <number_encoded_amino_acids>562</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKKKKASIFASSFDCLFFNPTMEATASFTSTMASHHFFPLSKATLSSSKLNPTCNSSSSWIGSTHSLSFSSRNSFTRDTWRVINSKNVVRREMSGVIRAEMFGQLTSGLENAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQSVSEEAVGTGLIRGVKPDQQLVKTVRDELVKLMGGEVSELVFAKSKPTVILLAGLQGVGKTTVSAKLALYLKKQVDVPVYAAGTDVKPAEIARQGLQEAKKKNVDVVIMDTAGRLQIDKTMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVARMGTMSRVIGMMPGMGKVTPAQIREAEKSLKIMESMIDVMTPEEREQPELLAESPARRKRIAQESGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEEALKSEQQAPPGTARRKRRSEPRKQFADSGSARPSPRGFGAKN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="28166" e_stop="27939"/>
            <exon e_start="27859" e_stop="27757"/>
            <exon e_start="26840" e_stop="26740"/>
            <exon e_start="26118" e_stop="25981"/>
            <exon e_start="25891" e_stop="25748"/>
            <exon e_start="25482" e_stop="25407"/>
            <exon e_start="25137" e_stop="25052"/>
            <exon e_start="24941" e_stop="24816"/>
            <exon e_start="24348" e_stop="23984"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.872" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="0.946" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.881" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.820" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.868" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28166" e_stop="27939" e_length="228"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.976">
            <gDNA_intron_boundary i_start="27938" i_stop="27860" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="27859" e_stop="27757" e_length="103"/>
          </exon>
          <intron i_serial="2" don_prob="0.872" acc_prob="0.891">
            <gDNA_intron_boundary i_start="27756" i_stop="26841" i_length="916"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26840" e_stop="26740" e_length="101"/>
          </exon>
          <intron i_serial="3" don_prob="0.946" acc_prob="0.995">
            <gDNA_intron_boundary i_start="26739" i_stop="26119" i_length="621"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26118" e_stop="25981" e_length="138"/>
          </exon>
          <intron i_serial="4" don_prob="0.945" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25980" i_stop="25892" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="25891" e_stop="25748" e_length="144"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.982">
            <gDNA_intron_boundary i_start="25747" i_stop="25483" i_length="265"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="25482" e_stop="25407" e_length="76"/>
          </exon>
          <intron i_serial="6" don_prob="0.881" acc_prob="0.948">
            <gDNA_intron_boundary i_start="25406" i_stop="25138" i_length="269"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="25137" e_stop="25052" e_length="86"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.820">
            <gDNA_intron_boundary i_start="25051" i_stop="24942" i_length="110"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="24941" e_stop="24816" e_length="126"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.868">
            <gDNA_intron_boundary i_start="24815" i_stop="24349" i_length="467"/>
          </intron>
          <exon e_serial="9" e_score="0.981">
            <gDNA_exon_boundary e_start="24348" e_stop="23984" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28166" stop="27939"/>
              <exon start="27859" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27977" stop="27939"/>
              <exon start="27859" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27841" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="24251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27824" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27819" stop="27757"/>
              <exon start="26840" stop="26740"/>
              <exon start="26118" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="24253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700344" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26055" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26028" stop="25981"/>
              <exon start="25891" stop="25748"/>
              <exon start="25482" stop="25407"/>
              <exon start="25137" stop="25052"/>
              <exon start="24941" stop="24820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25131" stop="25052"/>
              <exon start="24941" stop="24816"/>
              <exon start="24348" stop="23984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342207" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACACCTTAACAATCTTTATCTATATATCTTCTTTACGAGTACACAGAATATCTAAACACAACTTCATCCATTCTCATGTTCACTGATAAGTGGGGGAACAGGTTGATGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAG : ATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAG : CTTTGGTCACAACATTCAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTCAAGGAG : GTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTT : ATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAG : GTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACACCAG : AGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAG : GTGAGTCAACTTGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAG : GCTCCTCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGCCAAGAACTGAAGTATAAGACTAGTATGTCAAACAAATTTTTGAATCTTTGACTAGCTATCTATGAGTATCAACTAGAAAAAGGAATTGTGAGCAAAAAAGGAAATGATCAACTAGAAAAGGGAAGTTCTTGACAAGATAATATATAGTACATTGTATGTACTCTCAACTATATAGTTTTGTCCCTCTTCTTGTGTAACTATTGTCTTCTTGATATATCTTATTATCTTGTAATCTTGAAAATTTCATTGTTTTTCCCACTCCTTTAA</gDNA_template>
            <first_frame> Y  T  L  T  I  F  I  Y  I  S  S  L  R  V  H  R  I  S  K  H  N  F  I  H  S  H  V  H  *  *  V  G  E  Q  V  D  V  P  V  Y  A  A  G  T  D  V  K  P  A  E  I  A  R  Q  G  L  Q  E  A  K  K  K  N  V  D  V  V  I  M  D  T  A  G  R  L  Q  :  I  D  K  T  M  M  D  E  L  K  D  V  K  R  V  L  N  P  T  E  V  L  L  V  V  D  A  M  T  G  Q  E  A  A   : A  L  V  T  T  F  N  L  E  I  G  I  T  G  A  I  L  T  K  L  D  G  D  S  R  G  G  A  A  L  S  V  K  E  :  V  S  G  K  P  I  K  L  V  G  R  G  E  R  M  E  D  L  E  P  F  Y  P  D  R  M  A  G  R  I  L  G  M  G  D  V  L  S  F  V  E  K  A  Q  E  V  :  M  R  Q  E  D  A  E  D  L  Q  K  K  I  M  S  A  K  F  D  F  N  D  F  L  K  Q  T  R  A  V  A  R  M  G  T  M  S  R  V  I  G  M  M  P  G  M  G  K  :  V  T  P  A  Q  I  R  E  A  E  K  S  L  K  I  M  E  S  M  I  D  V  M  T  P   : E  E  R  E  Q  P  E  L  L  A  E  S  P  A  R  R  K  R  I  A  Q  E  S  G  K  T  E  Q  Q  :  V  S  Q  L  V  A  Q  L  F  Q  M  R  V  R  M  K  N  L  M  G  V  M  E  G  G  S  I  P  A  L  S  N  L  E  E  A  L  K  S  E  Q  Q  :  A  P  P  G  T  A  R  R  K  R  R  S  E  P  R  K  Q  F  A  D  S  G  S  A  R  P  S  P  R  G  F  G  A  K  N  *  S  I  R  L  V  C  Q  T  N  F  *  I  F  D  *  L  S  M  S  I  N  *  K  K  E  L  *  A  K  K  E  M  I  N  *  K  R  E  V  L  D  K  I  I  Y  S  T  L  Y  V  L  S  T  I  *  F  C  P  S  S  C  V  T  I  V  F  L  I  Y  L  I  I  L  *  S  *  K  F  H  C  F  S  H  S  F   </first_frame>
            <second_frame>  T  P  *  Q  S  L  S  I  Y  L  L  Y  E  Y  T  E  Y  L  N  T  T  S  S  I  L  M  F  T  D  K  W  G  N  R  L  M  Y  L  F  M  Q  Q  E  Q  M  *  N  L  Q  K  *  P  D  K  D  Y  K  R  P  K  R  R  M  *  M  *  S  *  W  I  Q  L  E  D  F  R :   *  I  K  L  *  W  M  N  *  K  T  *  N  G  Y  *  T  P  Q  R  F  Y  L  L  W  M  Q  *  L  A  K  K  L  Q  :  L  W  S  Q  H  S  I  S  K  L  E  L  L  V  P  S  *  R  S  *  M  E  I  L  G  V  E  Q  L  *  V  S  R  R :   Y  Q  E  S  Q  S  S  S  *  E  G  V  N  V  W  R  T  L  N  L  S  I  L  T  A  W  L  D  V  F  *  E  W  E  M  F  Y  R  L  L  R  K  P  K  K  L :   C  V  K  K  M  L  K  I  C  R  R  R  S  *  V  Q  N  L  I  S  M  T  S  *  S  K  L  G  Q  L  L  G  W  V  P  C  R  V  L  L  V  *  C  L  A  W  E  R :   L  L  L  H  K  F  E  R  Q  R  R  A  *  R  *  W  S  Q  *  *  M  S  *  H  Q  :  R  R  G  S  N  Q  N  C  *  Q  N  L  L  L  E  G  N  V  S  L  K  N  L  G  K  L  S  N  R :   *  V  N  L  L  L  N  F  F  K  C  V  Y  V  *  R  I  *  W  A  L  W  K  V  V  R  F  L  H  *  V  I  *  R  R  H  *  N  L  N  S  R :   L  L  P  V  L  Q  G  G  S  E  G  Q  N  Q  G  N  N  L  Q  T  R  D  Q  L  G  L  A  L  V  V  S  G  P  R  T  E  V  *  D  *  Y  V  K  Q  I  F  E  S  L  T  S  Y  L  *  V  S  T  R  K  R  N  C  E  Q  K  R  K  *  S  T  R  K  G  K  F  L  T  R  *  Y  I  V  H  C  M  Y  S  Q  L  Y  S  F  V  P  L  L  V  *  L  L  S  S  *  Y  I  L  L  S  C  N  L  E  N  F  I  V  F  P  T  P  L  </second_frame>
            <third_frame>   H  L  N  N  L  Y  L  Y  I  F  F  T  S  T  Q  N  I  *  T  Q  L  H  P  F  S  C  S  L  I  S  G  G  T  G  *  C  T  C  L  C  S  R  N  R  C  K  T  C  R  N  S  P  T  R  I  T  R  G  Q  K  E  E  C  R  C  S  H  N  G  Y  S  W  K  T  S   : D  R  *  N  Y  D  G  *  I  K  R  R  E  T  G  T  E  P  H  R  G  F  T  C  C  G  C  N  D  W  P  R  S  C  S :   F  G  H  N  I  Q  S  R  N  W  N  Y  W  C  H  L  D  E  A  R  W  R  F  *  G  W  S  S  F  K  C  Q  G   : G  I  R  K  A  N  Q  A  R  R  K  G  *  T  Y  G  G  P  *  T  F  L  S  *  P  H  G  W  T  Y  F  R  N  G  R  C  S  I  V  C  *  E  S  P  R  S   : Y  A  S  R  R  C  *  R  F  A  E  E  D  H  E  C  K  I  *  F  Q  *  L  P  E  A  N  S  G  S  C  *  D  G  Y  H  V  A  C  Y  W  Y  D  A  W  H  G  K   : G  Y  S  C  T  N  S  R  G  R  E  E  L  K  D  N  G  V  N  D  R  C  H  D  T  R :   G  E  G  A  T  R  I  V  S  R  I  S  C  *  K  E  T  Y  R  S  R  I  W  E  N  *  A  T   : G  E  S  T  C  C  S  T  F  S  N  A  C  T  Y  E  E  F  D  G  R  Y  G  R  W  F  D  S  C  T  E  *  S  R  G  G  T  K  I  *  T  A   : G  S  S  R  Y  C  K  E  E  A  K  V  R  T  K  E  T  I  C  R  L  G  I  S  *  A  *  P  S  W  F  R  G  Q  E  L  K  Y  K  T  S  M  S  N  K  F  L  N  L  *  L  A  I  Y  E  Y  Q  L  E  K  G  I  V  S  K  K  G  N  D  Q  L  E  K  G  S  S  *  Q  D  N  I  *  Y  I  V  C  T  L  N  Y  I  V  L  S  L  F  L  C  N  Y  C  L  L  D  I  S  Y  Y  L  V  I  L  K  I  S  L  F  F  P  L  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28076" stop="27939"/>
                    <exon start="27859" stop="27757"/>
                    <exon start="26840" stop="26740"/>
                    <exon start="26118" stop="25981"/>
                    <exon start="25891" stop="25748"/>
                    <exon start="25482" stop="25407"/>
                    <exon start="25137" stop="25052"/>
                    <exon start="24941" stop="24816"/>
                    <exon start="24348" stop="24241"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1017</number_coding_nucleotides>
                  <number_encoded_amino_acids>339</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGEQVDVPVYAAGTDVKPAEIARQGLQEAKKKNVDVVIMDTAGRLQIDKTMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVARMGTMSRVIGMMPGMGKVTPAQIREAEKSLKIMESMIDVMTPEEREQPELLAESPARRKRIAQESGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEEALKSEQQAPPGTARRKRRSEPRKQFADSGSARPSPRGFGAKN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="31100" e_stop="30876"/>
            <exon e_start="30800" e_stop="30671"/>
            <exon e_start="29536" e_stop="29106"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.760" acc_prob="0.996" e_score="0.991"/>
          <exon-intron don_prob="0.999" acc_prob="0.971" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="31100" e_stop="30876" e_length="225"/>
          </exon>
          <intron i_serial="1" don_prob="0.760" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30875" i_stop="30801" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30800" e_stop="30671" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.971">
            <gDNA_intron_boundary i_start="30670" i_stop="29537" i_length="1134"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="29536" e_stop="29106" e_length="431"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31100" stop="30876"/>
              <exon start="30800" stop="30671"/>
              <exon start="29536" stop="29106"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735717" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31096" stop="30876"/>
              <exon start="30800" stop="30754"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31074" stop="30876"/>
              <exon start="30800" stop="30681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440098" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTGTTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACT : AGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAG : GGTGGATGATGAGTTGTCGTAGATGGTAATATTGATCCATTCGAGGAGGTGCCAGATGGGGTATAATGAATTATACTTCAAGAGAAGAAACCGGGAAGATGTATAATTGATTGTTAAACTCCAATGAAGTGTATGGAAAGGGAAGGGGCCTTGCTACTATAAGGTTTTAAATGCAAAGAGTACAACATATTAACAACTATGGCCTATGGGTCATTGGATTTCTATAACAGGGATATACTTCTCCTTTTTAGTTCCATACATTATTGCTGGATATTATAAAGTTGTAGGAATAAATTAATTGGAGAGTATTTTACTGTTAAAAATGTGACTTGTCTGCCTTGTCCAAATTCAAATTTCTAATCATATTTTCTATATCCTCAATCTTTCAAATTTTAGAGGTTGAAGTTCTTATTGCCCTTGTTACTAAATAT</gDNA_template>
            <first_frame> K  K  K  K  A  S  I  F  A  S  S  F  D  C  L  F  F  N  P  T  M  E  A  T  A  S  F  T  S  T  M  A  S  H  H  F  F  P  L  S  K  A  T  L  S  S  S  K  L  N  P  T  C  N  S  S  S  S  W  I  G  S  T  H  S  L  S  F  S  S  R  N  S  F  T  :  R  D  T  W  R  V  I  N  S  K  N  V  V  R  R  E  M  S  G  V  I  R  A  E  M  F  G  Q  L  T  S  G  L  E  N  A  W  N  K  L  K  G  E   : G  W  M  M  S  C  R  R  W  *  Y  *  S  I  R  G  G  A  R  W  G  I  M  N  Y  T  S  R  E  E  T  G  K  M  Y  N  *  L  L  N  S  N  E  V  Y  G  K  G  R  G  L  A  T  I  R  F  *  M  Q  R  V  Q  H  I  N  N  Y  G  L  W  V  I  G  F  L  *  Q  G  Y  T  S  P  F  *  F  H  T  L  L  L  D  I  I  K  L  *  E  *  I  N  W  R  V  F  Y  C  *  K  C  D  L  S  A  L  S  K  F  K  F  L  I  I  F  S  I  S  S  I  F  Q  I  L  E  V  E  V  L  I  A  L  V  T  K  Y </first_frame>
            <second_frame>  R  R  K  K  L  Q  F  L  L  L  L  L  I  V  C  S  L  I  L  P  W  K  P  L  L  L  S  L  Q  L  W  L  L  T  I  S  F  H  F  L  K  P  P  F  H  L  L  N  L  I  P  L  V  I  L  L  L  L  G  L  V  L  L  I  L  F  H  F  L  Q  E  I  H  L  L :   G  I  H  G  G  *  S  I  P  R  M  W  *  E  G  K  *  V  E  L  L  E  L  R  C  L  G  S  S  L  A  D  W  K  M  L  G  T  S  S  K  E  K  :  G  G  *  *  V  V  V  D  G  N  I  D  P  F  E  E  V  P  D  G  V  *  *  I  I  L  Q  E  K  K  P  G  R  C  I  I  D  C  *  T  P  M  K  C  M  E  R  E  G  A  L  L  L  *  G  F  K  C  K  E  Y  N  I  L  T  T  M  A  Y  G  S  L  D  F  Y  N  R  D  I  L  L  L  F  S  S  I  H  Y  C  W  I  L  *  S  C  R  N  K  L  I  G  E  Y  F  T  V  K  N  V  T  C  L  P  C  P  N  S  N  F  *  S  Y  F  L  Y  P  Q  S  F  K  F  *  R  L  K  F  L  L  P  L  L  L  N   </second_frame>
            <third_frame>   E  E  K  S  F  N  F  C  F  F  F  *  L  F  V  L  *  S  Y  H  G  S  H  C  F  F  H  F  N  Y  G  F  S  P  F  L  S  T  F  *  S  H  P  F  I  F  *  T  *  S  H  L  *  F  F  F  F  L  D  W  F  Y  S  F  S  F  I  F  F  K  K  F  I  Y   : *  G  Y  M  E  G  D  Q  F  Q  E  C  G  K  K  G  N  E  W  S  Y  *  S  *  D  V  W  A  A  H  *  R  I  G  K  C  L  E  Q  A  Q  R  R  R :   V  D  D  E  L  S  *  M  V  I  L  I  H  S  R  R  C  Q  M  G  Y  N  E  L  Y  F  K  R  R  N  R  E  D  V  *  L  I  V  K  L  Q  *  S  V  W  K  G  K  G  P  C  Y  Y  K  V  L  N  A  K  S  T  T  Y  *  Q  L  W  P  M  G  H  W  I  S  I  T  G  I  Y  F  S  F  L  V  P  Y  I  I  A  G  Y  Y  K  V  V  G  I  N  *  L  E  S  I  L  L  L  K  M  *  L  V  C  L  V  Q  I  Q  I  S  N  H  I  F  Y  I  L  N  L  S  N  F  R  G  *  S  S  Y  C  P  C  Y  *  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31100" stop="30876"/>
                    <exon start="30800" stop="30671"/>
                    <exon start="29536" stop="29508"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKKKASIFASSFDCLFFNPTMEATASFTSTMASHHFFPLSKATLSSSKLNPTCNSSSSWIGSTHSLSFSSRNSFTRDTWRVINSKNVVRREMSGVIRAEMFGQLTSGLENAWNKLKGEGWMMSCRRW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="36302" PGL_stop="34269"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36302" e_stop="36251"/>
            <exon e_start="35477" e_stop="35358"/>
            <exon e_start="35067" e_stop="34938"/>
            <exon e_start="34857" e_stop="34506"/>
            <exon e_start="34284" e_stop="34269"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.993" e_score="0.962"/>
          <exon-intron don_prob="0.889" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.975" e_score="0.991"/>
          <exon-only e_score="0.438"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="36302" e_stop="36251" e_length="52"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.993">
            <gDNA_intron_boundary i_start="36250" i_stop="35478" i_length="773"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35477" e_stop="35358" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.889" acc_prob="0.996">
            <gDNA_intron_boundary i_start="35357" i_stop="35068" i_length="290"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35067" e_stop="34938" e_length="130"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.963">
            <gDNA_intron_boundary i_start="34937" i_stop="34858" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="34857" e_stop="34506" e_length="352"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.975">
            <gDNA_intron_boundary i_start="34505" i_stop="34285" i_length="221"/>
          </intron>
          <exon e_serial="5" e_score="0.438">
            <gDNA_exon_boundary e_start="34284" e_stop="34269" e_length="16"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36302" stop="36251"/>
              <exon start="35477" stop="35358"/>
              <exon start="35067" stop="34938"/>
              <exon start="34857" stop="34506"/>
              <exon start="34284" stop="34269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716405" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGAGATCCCTATATCCAGCAGCAGGAGTTTATAAAGTTATGGACGCTGAAG : GAGGCATATGTTAAAGCACTTGGGAAGGGTTTCTCATGTGCACCTTTCAAGACGTTTACCATTCGTCTTGGGAGCTCTACTGGAGAACAGTTTCATCCGTCTCAGAATTCAAGTGCTGAG : GCGAGTGAAATAGTAGTGGATTCTCTTGACAACACAGAGAACCTTACAAGTAATTGGCAATTTATGCTCCTGGAGTTTGCTAGTTCTCATTATGTTGCCATTTGCACCGAAAAGGATGTCAATACAAAAG : GTGATTGCGATAATAATCCATTGAAATTAACAGTTTGGAAGACAATTCCATTTGTCGAAGATAGTTGTGTCTCTGGAACAGACACAGTTCTTAAAGTTTGTGGCTTGAGATAATGATTATTACATCCGCGATGATACTTAATCTGAGAATCTATCATTATACATTAGAATCCTTGGATTCAGAGTAGCAACTTATATTGCATCCATCAATTTTATGCTGGGAAAACAGATTATACAAGTGAATGAATTCTCATTATTTTGCATTCTTGTCTGTAAGATGGCTAGTTTTCTTCATGATTGTAAACATTGCTTCTGTCACATATCTTTATTTTTTTTCCACGAGACGATGAAAA : CTCCAGTACATCAAAA</gDNA_template>
            <first_frame> W  R  S  L  Y  P  A  A  G  V  Y  K  V  M  D  A  E   : G  G  I  C  *  S  T  W  E  G  F  L  M  C  T  F  Q  D  V  Y  H  S  S  W  E  L  Y  W  R  T  V  S  S  V  S  E  F  K  C  *   : G  E  *  N  S  S  G  F  S  *  Q  H  R  E  P  Y  K  *  L  A  I  Y  A  P  G  V  C  *  F  S  L  C  C  H  L  H  R  K  G  C  Q  Y  K  R :   *  L  R  *  *  S  I  E  I  N  S  L  E  D  N  S  I  C  R  R  *  L  C  L  W  N  R  H  S  S  *  S  L  W  L  E  I  M  I  I  T  S  A  M  I  L  N  L  R  I  Y  H  Y  T  L  E  S  L  D  S  E  *  Q  L  I  L  H  P  S  I  L  C  W  E  N  R  L  Y  K  *  M  N  S  H  Y  F  A  F  L  S  V  R  W  L  V  F  F  M  I  V  N  I  A  S  V  T  Y  L  Y  F  F  S  T  R  R  *  K  :  L  Q  Y  I  K  </first_frame>
            <second_frame>  G  D  P  Y  I  Q  Q  Q  E  F  I  K  L  W  T  L  K  :  E  A  Y  V  K  A  L  G  K  G  F  S  C  A  P  F  K  T  F  T  I  R  L  G  S  S  T  G  E  Q  F  H  P  S  Q  N  S  S  A  E  :  A  S  E  I  V  V  D  S  L  D  N  T  E  N  L  T  S  N  W  Q  F  M  L  L  E  F  A  S  S  H  Y  V  A  I  C  T  E  K  D  V  N  T  K   : G  D  C  D  N  N  P  L  K  L  T  V  W  K  T  I  P  F  V  E  D  S  C  V  S  G  T  D  T  V  L  K  V  C  G  L  R  *  *  L  L  H  P  R  *  Y  L  I  *  E  S  I  I  I  H  *  N  P  W  I  Q  S  S  N  L  Y  C  I  H  Q  F  Y  A  G  K  T  D  Y  T  S  E  *  I  L  I  I  L  H  S  C  L  *  D  G  *  F  S  S  *  L  *  T  L  L  L  S  H  I  F  I  F  F  P  R  D  D  E  N :   S  S  T  S  K </second_frame>
            <third_frame>   E  I  P  I  S  S  S  R  S  L  *  S  Y  G  R  *  R :   R  H  M  L  K  H  L  G  R  V  S  H  V  H  L  S  R  R  L  P  F  V  L  G  A  L  L  E  N  S  F  I  R  L  R  I  Q  V  L  R :   R  V  K  *  *  W  I  L  L  T  T  Q  R  T  L  Q  V  I  G  N  L  C  S  W  S  L  L  V  L  I  M  L  P  F  A  P  K  R  M  S  I  Q  K  :  V  I  A  I  I  I  H  *  N  *  Q  F  G  R  Q  F  H  L  S  K  I  V  V  S  L  E  Q  T  Q  F  L  K  F  V  A  *  D  N  D  Y  Y  I  R  D  D  T  *  S  E  N  L  S  L  Y  I  R  I  L  G  F  R  V  A  T  Y  I  A  S  I  N  F  M  L  G  K  Q  I  I  Q  V  N  E  F  S  L  F  C  I  L  V  C  K  M  A  S  F  L  H  D  C  K  H  C  F  C  H  I  S  L  F  F  F  H  E  T  M  K   : T  P  V  H  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36301" stop="36251"/>
                    <exon start="35477" stop="35358"/>
                    <exon start="35067" stop="34938"/>
                    <exon start="34857" stop="34745"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>411</number_coding_nucleotides>
                  <number_encoded_amino_acids>137</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GDPYIQQQEFIKLWTLKEAYVKALGKGFSCAPFKTFTIRLGSSTGEQFHPSQNSSAEASEIVVDSLDNTENLTSNWQFMLLEFASSHYVAICTEKDVNTKGDCDNNPLKLTVWKTIPFVEDSCVSGTDTVLKVCGLR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34716" stop="34506"/>
                    <exon start="34284" stop="34271"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SENLSLYIRILGFRVATYIASINFMLGKQIIQVNEFSLFCILVCKMASFLHDCKHCFCHISLFFFHETMKTPVHQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="39485" PGL_stop="41455"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39485" e_stop="39512"/>
            <exon e_start="40702" e_stop="41455"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.571"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.571">
            <gDNA_exon_boundary e_start="39485" e_stop="39512" e_length="28"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="39513" i_stop="40701" i_length="1189"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="40702" e_stop="41455" e_length="754"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39485" stop="39512"/>
              <exon start="40702" stop="41455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40732" stop="41331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613051" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTTTCCTTTTTCACTTTTTTATTATTT : TTGTTTATGTCAAATTGAAGAAAATCATATTGAAATTGGAAACCAAAACAATATTCATTCTAAAAAAAAAAAAACATAAATTACATTCATCCTGCTAGTTTCCCCAGCCAAACATGACTAGAGAGAAAGGTGACAGAATTCCTGTTGAACTACTAAGAAAGTAACCAATATCCAAGCACAAACATAACTGGATAATACATTGTCTTCTTCTTTTTTTTCCAAACATAAATCACAACCATTTAACTTCTTGATGAGGTAGCAACAATAGCCCCTTGAGGCGAGACGTTGTTCATCGCCATGCTTCCACCCTTTCTGTTGTCGAATTCAACCTATCGATGATTCTGACTCCTTTGCCCTTCTCTAAACTACCAGATATGTGACCTATTGGCCATTCAATCATTTTCTTTGATCCTTTCAGACTAGAACTGCTCGAATGCACGCTTTTAGTCCTTCGGATTTTTGGTTGACTTCTTCCACTTGTAGAATTGATGTTACCAGATCCAAGCTCATCATCCTTTGTGCTGTCTGGTAGGTTTGAGATTTCACTGAGACAATCAACGAACGCATCTTTCTGAAGAACGTTCTCTATGGTACATGGTAATCCATGGGATTTATTCTCAACTATTATCTCTCTGAGGGCAGAATTAGCAGCGCCACTTGAGGGTCGTTCTTTGGATATAAGGATATCCTCCTCGATCTCGTTAGACTTCTGAACTATTGGTTGTGAAGCACTATGATGTCCATTTTCATCGAA</gDNA_template>
            <first_frame> P  F  L  F  H  F  F  I  I   : F  V  Y  V  K  L  K  K  I  I  L  K  L  E  T  K  T  I  F  I  L  K  K  K  K  H  K  L  H  S  S  C  *  F  P  Q  P  N  M  T  R  E  K  G  D  R  I  P  V  E  L  L  R  K  *  P  I  S  K  H  K  H  N  W  I  I  H  C  L  L  L  F  F  P  N  I  N  H  N  H  L  T  S  *  *  G  S  N  N  S  P  L  R  R  D  V  V  H  R  H  A  S  T  L  S  V  V  E  F  N  L  S  M  I  L  T  P  L  P  F  S  K  L  P  D  M  *  P  I  G  H  S  I  I  F  F  D  P  F  R  L  E  L  L  E  C  T  L  L  V  L  R  I  F  G  *  L  L  P  L  V  E  L  M  L  P  D  P  S  S  S  S  F  V  L  S  G  R  F  E  I  S  L  R  Q  S  T  N  A  S  F  *  R  T  F  S  M  V  H  G  N  P  W  D  L  F  S  T  I  I  S  L  R  A  E  L  A  A  P  L  E  G  R  S  L  D  I  R  I  S  S  S  I  S  L  D  F  *  T  I  G  C  E  A  L  *  C  P  F  S  S   </first_frame>
            <second_frame>  L  S  F  F  T  F  L  L  F  :  L  F  M  S  N  *  R  K  S  Y  *  N  W  K  P  K  Q  Y  S  F  *  K  K  K  N  I  N  Y  I  H  P  A  S  F  P  S  Q  T  *  L  E  R  K  V  T  E  F  L  L  N  Y  *  E  S  N  Q  Y  P  S  T  N  I  T  G  *  Y  I  V  F  F  F  F  F  Q  T  *  I  T  T  I  *  L  L  D  E  V  A  T  I  A  P  *  G  E  T  L  F  I  A  M  L  P  P  F  L  L  S  N  S  T  Y  R  *  F  *  L  L  C  P  S  L  N  Y  Q  I  C  D  L  L  A  I  Q  S  F  S  L  I  L  S  D  *  N  C  S  N  A  R  F  *  S  F  G  F  L  V  D  F  F  H  L  *  N  *  C  Y  Q  I  Q  A  H  H  P  L  C  C  L  V  G  L  R  F  H  *  D  N  Q  R  T  H  L  S  E  E  R  S  L  W  Y  M  V  I  H  G  I  Y  S  Q  L  L  S  L  *  G  Q  N  *  Q  R  H  L  R  V  V  L  W  I  *  G  Y  P  P  R  S  R  *  T  S  E  L  L  V  V  K  H  Y  D  V  H  F  H  R  </second_frame>
            <third_frame>   F  P  F  S  L  F  Y  Y  F :   C  L  C  Q  I  E  E  N  H  I  E  I  G  N  Q  N  N  I  H  S  K  K  K  K  T  *  I  T  F  I  L  L  V  S  P  A  K  H  D  *  R  E  R  *  Q  N  S  C  *  T  T  K  K  V  T  N  I  Q  A  Q  T  *  L  D  N  T  L  S  S  S  F  F  S  K  H  K  S  Q  P  F  N  F  L  M  R  *  Q  Q  *  P  L  E  A  R  R  C  S  S  P  C  F  H  P  F  C  C  R  I  Q  P  I  D  D  S  D  S  F  A  L  L  *  T  T  R  Y  V  T  Y  W  P  F  N  H  F  L  *  S  F  Q  T  R  T  A  R  M  H  A  F  S  P  S  D  F  W  L  T  S  S  T  C  R  I  D  V  T  R  S  K  L  I  I  L  C  A  V  W  *  V  *  D  F  T  E  T  I  N  E  R  I  F  L  K  N  V  L  Y  G  T  W  *  S  M  G  F  I  L  N  Y  Y  L  S  E  G  R  I  S  S  A  T  *  G  S  F  F  G  Y  K  D  I  L  L  D  L  V  R  L  L  N  Y  W  L  *  S  T  M  M  S  I  F  I  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0168F14.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="40693" e_stop="41334"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.905"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="40693" e_stop="41334" e_length="642"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40693" stop="41334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418104" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40732" stop="41331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613051" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTAATCACTTGTTTATGTCAAATTGAAGAAAATCATATTGAAATTGGAAACCAAAACAATATTCATTCTAAAAAAAAAAAAACATAAATTACATTCATCCTGCTAGTTTCCCCAGCCAAACATGACTAGAGAGAAAGGTGACAGAATTCCTGTTGAACTACTAAGAAAGTAACCAATATCCAAGCACAAACATAACTGGATAATACATTGTCTTCTTCTTTTTTTTCCAAACATAAATCACAACCATTTAACTTCTTGATGAGGTAGCAACAATAGCCCCTTGAGGCGAGACGTTGTTCATCGCCATGCTTCCACCCTTTCTGTTGTCGAATTCAACCTATCGATGATTCTGACTCCTTTGCCCTTCTCTAAACTACCAGATATGTGACCTATTGGCCATTCAATCATTTTCTTTGATCCTTTCAGACTAGAACTGCTCGAATGCACGCTTTTAGTCCTTCGGATTTTTGGTTGACTTCTTCCACTTGTAGAATTGATGTTACCAGATCCAAGCTCATCATCCTTTGTGCTGTCTGGTAGGTTTGAGATTTCACTGAGACAATCAACGAACGCATCTTTCTGAAGAACGTTCTCTATGGTACATGGTAATCCATGGGATTTATTCTCAACTATTATCTCTC</gDNA_template>
            <first_frame> S  N  H  L  F  M  S  N  *  R  K  S  Y  *  N  W  K  P  K  Q  Y  S  F  *  K  K  K  N  I  N  Y  I  H  P  A  S  F  P  S  Q  T  *  L  E  R  K  V  T  E  F  L  L  N  Y  *  E  S  N  Q  Y  P  S  T  N  I  T  G  *  Y  I  V  F  F  F  F  F  Q  T  *  I  T  T  I  *  L  L  D  E  V  A  T  I  A  P  *  G  E  T  L  F  I  A  M  L  P  P  F  L  L  S  N  S  T  Y  R  *  F  *  L  L  C  P  S  L  N  Y  Q  I  C  D  L  L  A  I  Q  S  F  S  L  I  L  S  D  *  N  C  S  N  A  R  F  *  S  F  G  F  L  V  D  F  F  H  L  *  N  *  C  Y  Q  I  Q  A  H  H  P  L  C  C  L  V  G  L  R  F  H  *  D  N  Q  R  T  H  L  S  E  E  R  S  L  W  Y  M  V  I  H  G  I  Y  S  Q  L  L  S  L </first_frame>
            <second_frame>  V  I  T  C  L  C  Q  I  E  E  N  H  I  E  I  G  N  Q  N  N  I  H  S  K  K  K  K  T  *  I  T  F  I  L  L  V  S  P  A  K  H  D  *  R  E  R  *  Q  N  S  C  *  T  T  K  K  V  T  N  I  Q  A  Q  T  *  L  D  N  T  L  S  S  S  F  F  S  K  H  K  S  Q  P  F  N  F  L  M  R  *  Q  Q  *  P  L  E  A  R  R  C  S  S  P  C  F  H  P  F  C  C  R  I  Q  P  I  D  D  S  D  S  F  A  L  L  *  T  T  R  Y  V  T  Y  W  P  F  N  H  F  L  *  S  F  Q  T  R  T  A  R  M  H  A  F  S  P  S  D  F  W  L  T  S  S  T  C  R  I  D  V  T  R  S  K  L  I  I  L  C  A  V  W  *  V  *  D  F  T  E  T  I  N  E  R  I  F  L  K  N  V  L  Y  G  T  W  *  S  M  G  F  I  L  N  Y  Y  L   </second_frame>
            <third_frame>   *  S  L  V  Y  V  K  L  K  K  I  I  L  K  L  E  T  K  T  I  F  I  L  K  K  K  K  H  K  L  H  S  S  C  *  F  P  Q  P  N  M  T  R  E  K  G  D  R  I  P  V  E  L  L  R  K  *  P  I  S  K  H  K  H  N  W  I  I  H  C  L  L  L  F  F  P  N  I  N  H  N  H  L  T  S  *  *  G  S  N  N  S  P  L  R  R  D  V  V  H  R  H  A  S  T  L  S  V  V  E  F  N  L  S  M  I  L  T  P  L  P  F  S  K  L  P  D  M  *  P  I  G  H  S  I  I  F  F  D  P  F  R  L  E  L  L  E  C  T  L  L  V  L  R  I  F  G  *  L  L  P  L  V  E  L  M  L  P  D  P  S  S  S  S  F  V  L  S  G  R  F  E  I  S  L  R  Q  S  T  N  A  S  F  *  R  T  F  S  M  V  H  G  N  P  W  D  L  F  S  T  I  I  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0168F14.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="44630" PGL_stop="40786"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44630" e_stop="44572"/>
            <exon e_start="42992" e_stop="42872"/>
            <exon e_start="42732" e_stop="42613"/>
            <exon e_start="42097" e_stop="41867"/>
            <exon e_start="41587" e_stop="40786"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44630" e_stop="44572" e_length="59"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.992">
            <gDNA_intron_boundary i_start="44571" i_stop="42993" i_length="1579"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42992" e_stop="42872" e_length="121"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="42871" i_stop="42733" i_length="139"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42732" e_stop="42613" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.997">
            <gDNA_intron_boundary i_start="42612" i_stop="42098" i_length="515"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42097" e_stop="41867" e_length="231"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="41866" i_stop="41588" i_length="279"/>
          </intron>
          <exon e_serial="5" e_score="0.995">
            <gDNA_exon_boundary e_start="41587" e_stop="40786" e_length="802"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44630" stop="44572"/>
              <exon start="42992" stop="42872"/>
              <exon start="42732" stop="42613"/>
              <exon start="42097" stop="41869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42710" stop="42613"/>
              <exon start="42097" stop="41867"/>
              <exon start="41587" stop="41350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E621430" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42707" stop="42613"/>
              <exon start="42097" stop="41867"/>
              <exon start="41587" stop="41473"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E621103" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42644" stop="42613"/>
              <exon start="42097" stop="41867"/>
              <exon start="41587" stop="40967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42644" stop="42613"/>
              <exon start="42097" stop="41867"/>
              <exon start="41587" stop="41016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41925" stop="41867"/>
              <exon start="41587" stop="40858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41925" stop="41867"/>
              <exon start="41587" stop="41065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41891" stop="41867"/>
              <exon start="41587" stop="40855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41890" stop="41867"/>
              <exon start="41587" stop="41064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41449" stop="40786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423937" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCTTGGTCTTCCTGTTGAGTTTGAACCTGAAGTACCTAGAAGACCCCCAAGTGCCAG : TACAAGAGTCTTTGGAGTTTCGACAGATTGCATGCAGCTTTCATTTGACTCTCGAGGAAATAGTGTCCCCACAATCCTTCTGATGATGCAAGGGCGCTTATACGTTCAAGGTGGCTTGCAG : GCTGAAGGGATCTTCAGGATCAATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAATAGGGGGATTATTCCAGATAACATTGACGTCCATTGCTTAGCAGGTCTTATAAAG : GCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAG : ATGGCAGATCCGTTGACTGCTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGTCACATATCTGGTAGTTTAGAGAAGGGCAAAGGAGTCAGAATCATCGATAGGTTGAATTCGACAACAGAAAGGGTGGAAGCATGGCGATGAACAACGTCTCGCCTCAAGGGGCTATTGTTGCTACCTCATCAAGAAGTTAAATGGTTGTGATTTATGTTTGGAAAAAAAAGAAGAAGACAATGTATTATCCAGTTATGTTTGTGCTTGGATATTGGTTACTTTCTTAGTAGTTCAACAGGAATTCTGTCACCTTTCTCTCTAGTCATGTTTGGCTGGGGAAACTAGCAGGATGAAT</gDNA_template>
            <first_frame> F  L  G  L  P  V  E  F  E  P  E  V  P  R  R  P  P  S  A  S :   T  R  V  F  G  V  S  T  D  C  M  Q  L  S  F  D  S  R  G  N  S  V  P  T  I  L  L  M  M  Q  G  R  L  Y  V  Q  G  G  L  Q  :  A  E  G  I  F  R  I  N  A  E  N  G  Q  E  E  F  V  R  E  Q  L  N  R  G  I  I  P  D  N  I  D  V  H  C  L  A  G  L  I  K  :  A  W  F  R  E  L  P  T  G  V  L  D  S  L  S  P  E  E  I  M  R  A  Q  S  E  E  E  C  V  R  L  V  R  L  L  P  P  T  E  A  A  L  L  D  W  A  I  N  L  M  A  D  V  A  Q  L  E  S  F  N  K  M  N  A  R  N  I  A  M  V  F  A  P  N  M  T  Q  :  M  A  D  P  L  T  A  L  M  Y  A  V  Q  V  M  N  F  L  K  T  L  I  L  R  T  L  K  D  R  E  E  T  V  V  E  A  G  P  A  P  E  L  E  P  F  D  E  N  G  H  H  S  A  S  Q  P  I  V  Q  K  S  N  E  I  E  E  D  I  L  I  S  K  E  R  P  S  S  G  A  A  N  S  A  L  R  E  I  I  V  E  N  K  S  H  G  L  P  C  T  I  E  N  V  L  Q  K  D  A  F  V  D  C  L  S  E  I  S  N  L  P  D  S  T  K  D  D  E  L  G  S  G  N  I  N  S  T  S  G  R  S  Q  P  K  I  R  R  T  K  S  V  H  S  S  S  S  S  L  K  G  S  K  K  M  I  E  W  P  I  G  H  I  S  G  S  L  E  K  G  K  G  V  R  I  I  D  R  L  N  S  T  T  E  R  V  E  A  W  R  *  T  T  S  R  L  K  G  L  L  L  L  P  H  Q  E  V  K  W  L  *  F  M  F  G  K  K  R  R  R  Q  C  I  I  Q  L  C  L  C  L  D  I  G  Y  F  L  S  S  S  T  G  I  L  S  P  F  S  L  V  M  F  G  W  G  N  *  Q  D  E  </first_frame>
            <second_frame>  F  L  V  F  L  L  S  L  N  L  K  Y  L  E  D  P  Q  V  P   : V  Q  E  S  L  E  F  R  Q  I  A  C  S  F  H  L  T  L  E  E  I  V  S  P  Q  S  F  *  *  C  K  G  A  Y  T  F  K  V  A  C  R :   L  K  G  S  S  G  S  M  P  K  M  A  K  K  N  L  S  G  S  S  *  I  G  G  L  F  Q  I  T  L  T  S  I  A  *  Q  V  L  *  R :   L  G  S  E  S  C  Q  R  E  F  W  I  L  S  R  Q  R  K  L  C  V  L  N  R  K  K  S  V  C  G  S  *  D  F  F  L  Q  L  K  L  L  Y  *  I  G  L  L  T  *  W  L  M  L  L  N  W  K  V  L  T  K  *  M  H  V  I  S  L  W  C  L  L  Q  I  *  H  R :   W  Q  I  R  *  L  L  *  C  M  Q  F  K  L  *  T  F  S  K  L  L  F  S  G  L  *  K  T  E  K  K  L  L  *  K  L  V  L  H  Q  N  W  S  L  S  M  K  M  D  I  I  V  L  H  N  Q  *  F  R  S  L  T  R  S  R  R  I  S  L  Y  P  K  N  D  P  Q  V  A  L  L  I  L  P  S  E  R  *  *  L  R  I  N  P  M  D  Y  H  V  P  *  R  T  F  F  R  K  M  R  S  L  I  V  S  V  K  S  Q  T  Y  Q  T  A  Q  R  M  M  S  L  D  L  V  T  S  I  L  Q  V  E  E  V  N  Q  K  S  E  G  L  K  A  C  I  R  A  V  L  V  *  K  D  Q  R  K  *  L  N  G  Q  *  V  T  Y  L  V  V  *  R  R  A  K  E  S  E  S  S  I  G  *  I  R  Q  Q  K  G  W  K  H  G  D  E  Q  R  L  A  S  R  G  Y  C  C  Y  L  I  K  K  L  N  G  C  D  L  C  L  E  K  K  E  E  D  N  V  L  S  S  Y  V  C  A  W  I  L  V  T  F  L  V  V  Q  Q  E  F  C  H  L  S  L  *  S  C  L  A  G  E  T  S  R  M  N </second_frame>
            <third_frame>   S  W  S  S  C  *  V  *  T  *  S  T  *  K  T  P  K  C  Q  :  Y  K  S  L  W  S  F  D  R  L  H  A  A  F  I  *  L  S  R  K  *  C  P  H  N  P  S  D  D  A  R  A  L  I  R  S  R  W  L  A   : G  *  R  D  L  Q  D  Q  C  R  K  W  P  R  R  I  C  Q  G  A  A  K  *  G  D  Y  S  R  *  H  *  R  P  L  L  S  R  S  Y  K   : G  L  V  Q  R  V  A  N  G  S  F  G  F  S  L  A  R  G  N  Y  A  C  S  I  G  R  R  V  C  A  A  R  E  T  S  S  S  N  *  S  C  S  I  R  L  G  Y  *  L  D  G  *  C  C  S  T  G  K  F  *  Q  N  E  C  T  *  Y  R  Y  G  V  C  S  K  Y  D  T   : D  G  R  S  V  D  C  F  D  V  C  S  S  S  Y  E  L  S  Q  N  S  Y  S  P  D  F  E  R  P  R  R  N  C  C  R  S  W  S  C  T  R  T  G  A  F  R  *  K  W  T  S  *  C  F  T  T  N  S  S  E  V  *  R  D  R  G  G  Y  P  Y  I  Q  R  T  T  L  K  W  R  C  *  F  C  P  Q  R  D  N  S  *  E  *  I  P  W  I  T  M  Y  H  R  E  R  S  S  E  R  C  V  R  *  L  S  Q  *  N  L  K  P  T  R  Q  H  K  G  *  *  A  W  I  W  *  H  Q  F  Y  K  W  K  K  S  T  K  N  P  K  D  *  K  R  A  F  E  Q  F  *  S  E  R  I  K  E  N  D  *  M  A  N  R  S  H  I  W  *  F  R  E  G  Q  R  S  Q  N  H  R  *  V  E  F  D  N  R  K  G  G  S  M  A  M  N  N  V  S  P  Q  G  A  I  V  A  T  S  S  R  S  *  M  V  V  I  Y  V  W  K  K  K  K  K  T  M  Y  Y  P  V  M  F  V  L  G  Y  W  L  L  S  *  *  F  N  R  N  S  V  T  F  L  S  S  H  V  W  L  G  K  L  A  G  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44630" stop="44572"/>
                    <exon start="42992" stop="42872"/>
                    <exon start="42732" stop="42613"/>
                    <exon start="42097" stop="41867"/>
                    <exon start="41587" stop="40991"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1125</number_coding_nucleotides>
                  <number_encoded_amino_acids>375</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLGLPVEFEPEVPRRPPSASTRVFGVSTDCMQLSFDSRGNSVPTILLMMQGRLYVQGGLQAEGIFRINAENGQEEFVREQLNRGIIPDNIDVHCLAGLIKAWFRELPTGVLDSLSPEEIMRAQSEEECVRLVRLLPPTEAALLDWAINLMADVAQLESFNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLKDREETVVEAGPAPELEPFDENGHHSASQPIVQKSNEIEEDILISKERPSSGAANSALREIIVENKSHGLPCTIENVLQKDAFVDCLSEISNLPDSTKDDELGSGNINSTSGRSQPKIRRTKSVHSSSSSLKGSKKMIEWPIGHISGSLEKGKGVRIIDRLNSTTERVEAWR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="44630" e_stop="44572"/>
            <exon e_start="42992" e_stop="42872"/>
            <exon e_start="42732" e_stop="42613"/>
            <exon e_start="42097" e_stop="41750"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44630" e_stop="44572" e_length="59"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.992">
            <gDNA_intron_boundary i_start="44571" i_stop="42993" i_length="1579"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42992" e_stop="42872" e_length="121"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="42871" i_stop="42733" i_length="139"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42732" e_stop="42613" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.997">
            <gDNA_intron_boundary i_start="42612" i_stop="42098" i_length="515"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42097" e_stop="41750" e_length="348"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44630" stop="44572"/>
              <exon start="42992" stop="42872"/>
              <exon start="42732" stop="42613"/>
              <exon start="42097" stop="41869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42954" stop="42872"/>
              <exon start="42732" stop="42613"/>
              <exon start="42097" stop="41750"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333964" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCTTGGTCTTCCTGTTGAGTTTGAACCTGAAGTACCTAGAAGACCCCCAAGTGCCAG : TACAAGAGTCTTTGGAGTTTCGACAGATTGCATGCAGCTTTCATTTGACTCTCGAGGAAATAGTGTCCCCACAATCCTTCTGATGATGCAAGGGCGCTTATACGTTCAAGGTGGCTTGCAG : GCTGAAGGGATCTTCAGGATCAATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAATAGGGGGATTATTCCAGATAACATTGACGTCCATTGCTTAGCAGGTCTTATAAAG : GCTTGGTTCAGAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAGGTAAGTCAAAACTTTCATGCAATTTAAAAGAAGGAATCATATTGTTGTTCCTATAACGTCTCTTTTCATTTTCTTAGTTTCGGGTGTGGGTAAGCGTTTGGGGGGTTACAGCTTGTT</gDNA_template>
            <first_frame> F  L  G  L  P  V  E  F  E  P  E  V  P  R  R  P  P  S  A  S :   T  R  V  F  G  V  S  T  D  C  M  Q  L  S  F  D  S  R  G  N  S  V  P  T  I  L  L  M  M  Q  G  R  L  Y  V  Q  G  G  L  Q  :  A  E  G  I  F  R  I  N  A  E  N  G  Q  E  E  F  V  R  E  Q  L  N  R  G  I  I  P  D  N  I  D  V  H  C  L  A  G  L  I  K  :  A  W  F  R  E  L  P  T  G  V  L  D  S  L  S  P  E  E  I  M  R  A  Q  S  E  E  E  C  V  R  L  V  R  L  L  P  P  T  E  A  A  L  L  D  W  A  I  N  L  M  A  D  V  A  Q  L  E  S  F  N  K  M  N  A  R  N  I  A  M  V  F  A  P  N  M  T  Q  V  S  Q  N  F  H  A  I  *  K  K  E  S  Y  C  C  S  Y  N  V  S  F  H  F  L  S  F  G  C  G  *  A  F  G  G  L  Q  L  V </first_frame>
            <second_frame>  F  L  V  F  L  L  S  L  N  L  K  Y  L  E  D  P  Q  V  P   : V  Q  E  S  L  E  F  R  Q  I  A  C  S  F  H  L  T  L  E  E  I  V  S  P  Q  S  F  *  *  C  K  G  A  Y  T  F  K  V  A  C  R :   L  K  G  S  S  G  S  M  P  K  M  A  K  K  N  L  S  G  S  S  *  I  G  G  L  F  Q  I  T  L  T  S  I  A  *  Q  V  L  *  R :   L  G  S  E  S  C  Q  R  E  F  W  I  L  S  R  Q  R  K  L  C  V  L  N  R  K  K  S  V  C  G  S  *  D  F  F  L  Q  L  K  L  L  Y  *  I  G  L  L  T  *  W  L  M  L  L  N  W  K  V  L  T  K  *  M  H  V  I  S  L  W  C  L  L  Q  I  *  H  R  *  V  K  T  F  M  Q  F  K  R  R  N  H  I  V  V  P  I  T  S  L  F  I  F  L  V  S  G  V  G  K  R  L  G  G  Y  S  L   </second_frame>
            <third_frame>   S  W  S  S  C  *  V  *  T  *  S  T  *  K  T  P  K  C  Q  :  Y  K  S  L  W  S  F  D  R  L  H  A  A  F  I  *  L  S  R  K  *  C  P  H  N  P  S  D  D  A  R  A  L  I  R  S  R  W  L  A   : G  *  R  D  L  Q  D  Q  C  R  K  W  P  R  R  I  C  Q  G  A  A  K  *  G  D  Y  S  R  *  H  *  R  P  L  L  S  R  S  Y  K   : G  L  V  Q  R  V  A  N  G  S  F  G  F  S  L  A  R  G  N  Y  A  C  S  I  G  R  R  V  C  A  A  R  E  T  S  S  S  N  *  S  C  S  I  R  L  G  Y  *  L  D  G  *  C  C  S  T  G  K  F  *  Q  N  E  C  T  *  Y  R  Y  G  V  C  S  K  Y  D  T  G  K  S  K  L  S  C  N  L  K  E  G  I  I  L  L  F  L  *  R  L  F  S  F  S  *  F  R  V  W  V  S  V  W  G  V  T  A  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44630" stop="44572"/>
                    <exon start="42992" stop="42872"/>
                    <exon start="42732" stop="42613"/>
                    <exon start="42097" stop="41840"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLGLPVEFEPEVPRRPPSASTRVFGVSTDCMQLSFDSRGNSVPTILLMMQGRLYVQGGLQAEGIFRINAENGQEEFVREQLNRGIIPDNIDVHCLAGLIKAWFRELPTGVLDSLSPEEIMRAQSEEECVRLVRLLPPTEAALLDWAINLMADVAQLESFNKMNARNIAMVFAPNMTQVSQNFHAI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="44787" PGL_stop="45696"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44787" e_stop="45132"/>
            <exon e_start="45239" e_stop="45696"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.693" acc_prob="0.000" e_score="0.960"/>
          <exon-only e_score="0.865"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="44787" e_stop="45132" e_length="346"/>
          </exon>
          <intron i_serial="1" don_prob="0.693" acc_prob="0.000">
            <gDNA_intron_boundary i_start="45133" i_stop="45238" i_length="106"/>
          </intron>
          <exon e_serial="2" e_score="0.865">
            <gDNA_exon_boundary e_start="45239" e_stop="45696" e_length="458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44787" stop="45132"/>
              <exon start="45239" stop="45696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576615" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTACAAGCAACCAAAGATTTCCTAAAACCAGTTAAACAAAGTGTTAACAAAGACAGCTGATCTCCCCCTTCTTCTCTTTCTCTCCTTTTTCTCTCTCTTTTTCTACCAGAAATACTAACTCCTCTTACTTCTACCTCACTATTATCTCCCCCTCTGTATACATCTACAACAGAATACACATTGGGTCCACTAATTACACTCTCTTGGTGAGACCCATCATTATCCCTAGCAACTAAACATGGTAGTATACTAATGGAGCTTGAAGCTGAAGGTAACTCATGTTGGGGTTGTATAATTTCAGTCATTTTCAAGAAACCCACAATAAAAAAGATTGGATTTTTAATG : TGGGTTCTAAATTTAATGGTAGAACAAATCAAGAAAAGCTCCTACCTTATAATATCAATCATTTTCAAGAAACCCACAAAAAAAAAATCCTTTTTTTTATTTAAAGATTGGATTTTTATATAAAGATTGGATTTTTCTTGGTGGGTTTTAATTGTATAACAAGAAGCAAGAAAAGTTTGGTGAAAAATTTACAACAACTTGAGTAAAACCCTTCTTTATGATAAGTTTGGTAGATTAGTAGAAATGGGGTTTGAGTAGAGTTGGATTCAAGCAAAGTTTGGTTTTTGGAAGGTGAGACATTAATATCATCATCACTTTCAATACATTTTCATTTTCTTCTCCTTATTTTATGGAAGCACTTCAATTCTTTATATGAAAAAAACTCAATAGGGGAGTAAGGGAGAATATGGTATAGTTCGAGGAGAAAAAAGAGAAAGAAACTATACTATAGAAAGAAG</gDNA_template>
            <first_frame> L  T  S  N  Q  R  F  P  K  T  S  *  T  K  C  *  Q  R  Q  L  I  S  P  F  F  S  F  S  P  F  S  L  S  F  S  T  R  N  T  N  S  S  Y  F  Y  L  T  I  I  S  P  S  V  Y  I  Y  N  R  I  H  I  G  S  T  N  Y  T  L  L  V  R  P  I  I  I  P  S  N  *  T  W  *  Y  T  N  G  A  *  S  *  R  *  L  M  L  G  L  Y  N  F  S  H  F  Q  E  T  H  N  K  K  D  W  I  F  N   : V  G  S  K  F  N  G  R  T  N  Q  E  K  L  L  P  Y  N  I  N  H  F  Q  E  T  H  K  K  K  I  L  F  F  I  *  R  L  D  F  Y  I  K  I  G  F  F  L  V  G  F  N  C  I  T  R  S  K  K  S  L  V  K  N  L  Q  Q  L  E  *  N  P  S  L  *  *  V  W  *  I  S  R  N  G  V  *  V  E  L  D  S  S  K  V  W  F  L  E  G  E  T  L  I  S  S  S  L  S  I  H  F  H  F  L  L  L  I  L  W  K  H  F  N  S  L  Y  E  K  N  S  I  G  E  *  G  R  I  W  Y  S  S  R  R  K  K  R  K  K  L  Y  Y  R  K  K </first_frame>
            <second_frame>  L  Q  A  T  K  D  F  L  K  P  V  K  Q  S  V  N  K  D  S  *  S  P  P  S  S  L  S  L  L  F  L  S  L  F  L  P  E  I  L  T  P  L  T  S  T  S  L  L  S  P  P  L  Y  T  S  T  T  E  Y  T  L  G  P  L  I  T  L  S  W  *  D  P  S  L  S  L  A  T  K  H  G  S  I  L  M  E  L  E  A  E  G  N  S  C  W  G  C  I  I  S  V  I  F  K  K  P  T  I  K  K  I  G  F  L  M  :  W  V  L  N  L  M  V  E  Q  I  K  K  S  S  Y  L  I  I  S  I  I  F  K  K  P  T  K  K  K  S  F  F  L  F  K  D  W  I  F  I  *  R  L  D  F  S  W  W  V  L  I  V  *  Q  E  A  R  K  V  W  *  K  I  Y  N  N  L  S  K  T  L  L  Y  D  K  F  G  R  L  V  E  M  G  F  E  *  S  W  I  Q  A  K  F  G  F  W  K  V  R  H  *  Y  H  H  H  F  Q  Y  I  F  I  F  F  S  L  F  Y  G  S  T  S  I  L  Y  M  K  K  T  Q  *  G  S  K  G  E  Y  G  I  V  R  G  E  K  R  E  R  N  Y  T  I  E  R   </second_frame>
            <third_frame>   Y  K  Q  P  K  I  S  *  N  Q  L  N  K  V  L  T  K  T  A  D  L  P  L  L  L  F  L  S  F  F  S  L  F  F  Y  Q  K  Y  *  L  L  L  L  L  P  H  Y  Y  L  P  L  C  I  H  L  Q  Q  N  T  H  W  V  H  *  L  H  S  L  G  E  T  H  H  Y  P  *  Q  L  N  M  V  V  Y  *  W  S  L  K  L  K  V  T  H  V  G  V  V  *  F  Q  S  F  S  R  N  P  Q  *  K  R  L  D  F  *  C :   G  F  *  I  *  W  *  N  K  S  R  K  A  P  T  L  *  Y  Q  S  F  S  R  N  P  Q  K  K  N  P  F  F  Y  L  K  I  G  F  L  Y  K  D  W  I  F  L  G  G  F  *  L  Y  N  K  K  Q  E  K  F  G  E  K  F  T  T  T  *  V  K  P  F  F  M  I  S  L  V  D  *  *  K  W  G  L  S  R  V  G  F  K  Q  S  L  V  F  G  R  *  D  I  N  I  I  I  T  F  N  T  F  S  F  S  S  P  Y  F  M  E  A  L  Q  F  F  I  *  K  K  L  N  R  G  V  R  E  N  M  V  *  F  E  E  K  K  E  K  E  T  I  L  *  K  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44998" stop="45132"/>
                    <exon start="45239" stop="45361"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DPSLSLATKHGSILMELEAEGNSCWGCIISVIFKKPTIKKIGFLMWVLNLMVEQIKKSSYLIISIIFKKPTKKKSFFLFKDWIFI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="51433" PGL_stop="51212"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="51433" e_stop="51212"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="51433" e_stop="51212" e_length="222"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51433" stop="51212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298638" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCATTACATCGGATTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCCTCCTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTTTTTATGTATTTTAGCTTCTTAGATACTCTTAGATTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGAAGAATAATAATAGTTGTTGAGTTTTTAGAAGTTATTGAA</gDNA_template>
            <first_frame> S  L  H  R  I  S  G  *  A  N  A  S  S  L  D  W  I  F  L  L  M  S  *  C  L  E  V  P  A  W  T  S  F  L  C  I  L  A  S  *  I  L  L  D  *  *  F  E  D  R  C  S  C  D  D  D  F  Q  I  L  G  R  I  I  I  V  V  E  F  L  E  V  I  E </first_frame>
            <second_frame>  H  Y  I  G  F  Q  G  E  L  T  L  L  A  W  T  G  S  S  S  S  C  L  D  A  L  K  F  R  H  G  L  A  F  Y  V  F  *  L  L  R  Y  S  *  I  S  N  L  R  I  D  V  L  V  M  M  T  S  R  F  W  E  E  *  *  *  L  L  S  F  *  K  L  L   </second_frame>
            <third_frame>   I  T  S  D  F  R  V  S  *  R  F  *  L  G  L  D  L  P  P  H  V  L  M  P  *  S  S  G  M  D  *  L  F  M  Y  F  S  F  L  D  T  L  R  L  V  I  *  G  *  M  F  L  *  *  *  L  P  D  F  G  K  N  N  N  S  C  *  V  F  R  S  Y  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0168F14.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="62319" PGL_stop="55991"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60712" e_stop="59881"/>
            <exon e_start="58054" e_stop="57886"/>
            <exon e_start="56519" e_stop="55991"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.968" e_score="0.937"/>
          <exon-intron don_prob="0.997" acc_prob="0.975" e_score="1.000"/>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.937">
            <gDNA_exon_boundary e_start="60712" e_stop="59881" e_length="832"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.968">
            <gDNA_intron_boundary i_start="59880" i_stop="58055" i_length="1826"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58054" e_stop="57886" e_length="169"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.975">
            <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366"/>
          </intron>
          <exon e_serial="3" e_score="0.960">
            <gDNA_exon_boundary e_start="56519" e_stop="55991" e_length="529"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60712" stop="60017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60711" stop="60035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558594" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60709" stop="59987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561642" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60709" stop="60154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60708" stop="60088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484042" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60706" stop="60008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559263" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60705" stop="60035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409197" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60701" stop="60097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60701" stop="60133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558370" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60701" stop="60297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60698" stop="60088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60698" stop="60227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60695" stop="60063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453227" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60695" stop="60063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60694" stop="60091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60688" stop="60147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557243" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60687" stop="60220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208592" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60684" stop="60218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269714" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60675" stop="60163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60669" stop="59881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60665" stop="59980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60575" stop="60286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584213" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60566" stop="60227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60544" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60432" stop="60163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584212" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60365" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56485"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60205" stop="59977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268607" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60205" stop="59987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370074" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60164" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449324" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60142" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59999" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423812" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59978" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353825" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59951" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612755" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57995" stop="57886"/>
              <exon start="56519" stop="56021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623030" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57974" stop="57886"/>
              <exon start="56519" stop="56021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558622" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56406" stop="55991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290904" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCCCATTTAGCTAATCTCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGAT : GGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG : GCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGTGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATCAGGGACGGACATTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGAGAGCAAATACAGGAGCTCATTGGTGAAATGAAAAAAATCCTTATTGACTGCTAGTATATTACTAAAACAAACACTATATTTTCCCACTCATCATGTTCAATGAAAATGCAGTAAGTTGTTTGTTTTTGACATCAAAAGTT</gDNA_template>
            <first_frame> F  P  F  S  *  S  L  S  N  G  *  A  R  K  R  R  R  S  S  V  V  *  V  E  K  S  A  G  R  K  H  R  A  Q  L  V  Q  G  G  S  R  W  H  R  Y  N  S  L  S  S  T  L  V  K  T  T  R  H  F  T  S  P  K  C  P  S  Q  T  P  K  F  Q  S  Y  P  Q  I  S  T  P  L  R  I  K  H  K  F  L  L  L  H  H  S  L  H  F  S  S  S  N  P  A  V  R  S  L  I  N  G  S  D  S  P  T  P  Q  N  L  R  S  H  L  R  L  R  F  S  S  H  P  R  T  R  N  Q  P  Q  L  M  D  E  H  R  H  F  I  R  F  R  H  G  Y  L  L  R  Q  H  L  S  I  R  K  R  K  I  G  V  R  F  K  D  S  Y  I  G  V  *  S  G  G  C  I  G  G  A  E  E  V  I  E  A  G  E  L  *  E  G  R  *  R  R  D  R  I  G  N  I  E  K  D  G  G  W  F  G  D  *  R  V  Y  S  R  W  *  S  E  *  T  I  L  G  A  W  D  *  Y  G  G  V  W  F  E  F  I  E  I  L  *  F  E  V  Y  G  F  G  I  N  E  R  I  T  S  C  E  I  A  V  E  *  T  R  D  *  S  H  S  *   : W  L  *  N  E  R  Y  K  T  V  W  T  I  G  C  C  W  I  N  C  S  S  F  L  K  R  P  K  G  E  S  M  G  E  V  C  N  C  N  P  Y  *  L  P  F  N  S  *  S  S  A  *  P  *  F  S  R :   L  L  S  F  C  H  P  Q  H  A  *  R  *  G  R  R  *  L  M  G  A  S  K  E  K  L  H  I  F  Y  Q  R  Q  E  Q  *  Q  A  F  H  R  H  G  R  P  E  F  P  H  V  Q  G  H  *  *  S  R  L  N  S  I  L  F  T  *  N  F  S  D  L  R  V  *  R  H  C  D  R  Y  L  Q  H  N  A  S  R  N  R  I  R  R  L  H  R  V  C  I  R  A  W  G  R  P  F  Y  C  H  I  R  H  N  Q  G  R  T  F  G  L  C  M  C  L  S  L  P  L  A  Y  *  R  A  N  T  G  A  H  W  *  N  E  K  N  P  Y  *  L  L  V  Y  Y  *  N  K  H  Y  I  F  P  L  I  M  F  N  E  N  A  V  S  C  L  F  L  T  S  K  V </first_frame>
            <second_frame>  S  H  L  A  N  L  S  V  M  A  E  Q  G  S  A  A  A  A  P  S  S  E  L  K  S  R  P  A  G  S  T  E  H  S  W  C  K  A  V  P  G  G  T  G  I  T  V  L  A  L  L  L  S  K  P  P  D  I  S  L  L  Q  N  A  L  H  K  L  Q  N  S  N  P  I  L  K  S  Q  L  H  Y  E  S  S  T  N  S  Y  S  Y  I  I  P  S  T  S  H  L  Q  I  Q  P  F  D  L  S  S  T  V  Q  I  L  R  R  L  K  T  S  D  L  T  S  V  S  D  F  H  L  I  L  E  H  E  I  N  H  N  S  W  M  N  T  G  T  S  S  D  S  D  T  D  I  F  F  A  S  I  Y  Q  L  E  N  E  K  S  V  F  A  L  R  I  H  T  S  V  C  D  R  A  A  A  L  A  V  L  K  K  L  L  K  L  V  S  C  E  K  E  D  E  E  G  T  E  L  E  I  L  K  K  M  E  V  G  L  G  I  E  E  Y  I  P  D  G  K  A  S  K  P  F  W  A  R  G  I  D  M  V  G  Y  G  L  N  S  L  R  F  C  N  L  K  F  M  D  S  E  S  T  R  G  S  Q  V  V  K  L  Q  L  N  K  Q  E  T  D  H  I  L  D  :  G  C  K  T  R  G  I  K  L  C  G  L  L  A  A  A  G  L  I  A  A  H  S  L  K  G  L  K  E  N  Q  W  E  K  Y  A  I  V  T  L  I  N  C  R  S  I  L  D  P  V  L  S  P  D  F  P   : G  F  Y  H  S  A  I  L  N  T  H  D  V  K  G  G  D  D  L  W  E  L  A  K  R  S  Y  T  S  F  I  N  A  K  N  N  N  K  H  F  T  D  M  G  D  L  N  F  L  M  C  R  A  I  D  N  P  G  L  T  P  S  S  S  L  R  T  S  L  I  S  V  F  E  D  T  V  I  D  T  S  S  T  M  H  Q  E  I  G  L  E  D  F  I  G  C  A  S  V  H  G  V  G  P  S  I  A  I  F  D  T  I  R  D  G  H  L  D  C  A  C  V  Y  P  F  P  L  H  T  R  E  Q  I  Q  E  L  I  G  E  M  K  K  I  L  I  D  C  *  Y  I  T  K  T  N  T  I  F  S  H  S  S  C  S  M  K  M  Q  *  V  V  C  F  *  H  Q  K   </second_frame>
            <third_frame>   P  I  *  L  I  S  Q  *  W  L  S  K  E  A  P  P  Q  L  R  R  L  S  *  K  V  G  R  P  E  A  P  S  T  A  G  A  R  R  F  P  V  A  Q  V  *  Q  S  *  L  Y  S  C  Q  N  H  Q  T  F  H  F  S  K  M  P  F  T  N  S  K  I  P  I  L  S  S  N  L  N  S  I  T  N  Q  A  Q  I  P  T  L  T  S  F  P  P  L  L  I  F  K  S  S  R  S  I  S  H  Q  R  F  R  F  S  D  A  S  K  P  P  I  S  P  P  S  P  I  F  I  S  S  S  N  T  K  S  T  T  T  H  G  *  T  P  A  L  H  Q  I  P  T  R  I  S  S  S  P  A  F  I  N  *  K  T  K  N  R  C  S  L  *  G  F  I  H  R  C  V  I  G  R  L  H  W  R  C  *  R  S  Y  *  S  W  *  V  V  R  R  K  M  K  K  G  Q  N  W  K  Y  *  K  R  W  R  L  V  W  G  L  K  S  I  F  Q  M  V  K  R  V  N  H  F  G  R  V  G  L  I  W  W  G  M  V  *  I  H  *  D  F  V  I  *  S  L  W  I  R  N  Q  R  E  D  H  K  L  *  N  C  S  *  I  N  K  R  L  I  T  F  L  M :   A  V  K  R  E  V  *  N  C  V  D  Y  W  L  L  L  D  *  L  Q  L  I  P  *  K  A  *  R  R  I  N  G  R  S  M  Q  L  *  P  L  L  T  A  V  Q  F  L  I  Q  C  L  A  L  I  F  Q  :  A  F  I  I  L  P  S  S  T  R  M  T  L  R  E  E  M  T  Y  G  S  *  Q  R  E  V  T  H  L  L  S  T  P  R  T  I  T  S  I  S  Q  T  W  E  T  *  I  S  S  C  A  G  P  L  I  I  P  A  *  L  H  P  L  H  L  E  L  L  *  S  P  C  L  K  T  L  *  S  I  P  P  A  Q  C  I  K  K  S  D  *  K  T  S  S  G  V  H  P  C  M  G  *  A  L  L  L  P  Y  S  T  Q  S  G  T  D  I  W  I  V  H  V  F  I  P  S  P  C  I  L  E  S  K  Y  R  S  S  L  V  K  *  K  K  S  L  L  T  A  S  I  L  L  K  Q  T  L  Y  F  P  T  H  H  V  Q  *  K  C  S  K  L  F  V  F  D  I  K  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60711" stop="59881"/>
                    <exon start="58054" stop="57886"/>
                    <exon start="56519" stop="56077"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1440</number_coding_nucleotides>
                  <number_encoded_amino_acids>480</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SHLANLSVMAEQGSAAAAPSSELKSRPAGSTEHSWCKAVPGGTGITVLALLLSKPPDISLLQNALHKLQNSNPILKSQLHYESSTNSYSYIIPSTSHLQIQPFDLSSTVQILRRLKTSDLTSVSDFHLILEHEINHNSWMNTGTSSDSDTDIFFASIYQLENEKSVFALRIHTSVCDRAAALAVLKKLLKLVSCEKEDEEGTELEILKKMEVGLGIEEYIPDGKASKPFWARGIDMVGYGLNSLRFCNLKFMDSESTRGSQVVKLQLNKQETDHILDGCKTRGIKLCGLLAAAGLIAAHSLKGLKENQWEKYAIVTLINCRSILDPVLSPDFPGFYHSAILNTHDVKGGDDLWELAKRSYTSFINAKNNNKHFTDMGDLNFLMCRAIDNPGLTPSSSLRTSLISVFEDTVIDTSSTMHQEIGLEDFIGCASVHGVGPSIAIFDTIRDGHLDCACVYPFPLHTREQIQELIGEMKKILIDC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="62319" e_stop="62247"/>
            <exon e_start="62167" e_stop="61790"/>
            <exon e_start="60807" e_stop="60796"/>
            <exon e_start="60701" e_stop="59881"/>
            <exon e_start="58054" e_stop="57886"/>
            <exon e_start="56519" e_stop="55991"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.897" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.984"/>
          <exon-intron don_prob="0.956" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.968" e_score="0.937"/>
          <exon-intron don_prob="0.997" acc_prob="0.975" e_score="1.000"/>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62319" e_stop="62247" e_length="73"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.897">
            <gDNA_intron_boundary i_start="62246" i_stop="62168" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="0.984">
            <gDNA_exon_boundary e_start="62167" e_stop="61790" e_length="378"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="61789" i_stop="60808" i_length="982"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60807" e_stop="60796" e_length="12"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.989">
            <gDNA_intron_boundary i_start="60795" i_stop="60702" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="0.937">
            <gDNA_exon_boundary e_start="60701" e_stop="59881" e_length="821"/>
          </exon>
          <intron i_serial="4" don_prob="0.987" acc_prob="0.968">
            <gDNA_intron_boundary i_start="59880" i_stop="58055" i_length="1826"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="58054" e_stop="57886" e_length="169"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.975">
            <gDNA_intron_boundary i_start="57885" i_stop="56520" i_length="1366"/>
          </intron>
          <exon e_serial="6" e_score="0.960">
            <gDNA_exon_boundary e_start="56519" e_stop="55991" e_length="529"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62319" stop="62247"/>
              <exon start="62167" stop="61790"/>
              <exon start="60807" stop="60796"/>
              <exon start="60701" stop="60697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264052" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60701" stop="60097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60701" stop="60133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558370" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60701" stop="60297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60698" stop="60088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60698" stop="60227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60695" stop="60063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453227" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60695" stop="60063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60694" stop="60091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60688" stop="60147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557243" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60687" stop="60220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208592" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60684" stop="60218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269714" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60675" stop="60163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60669" stop="59881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60665" stop="59980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60575" stop="60286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584213" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60566" stop="60227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60544" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60432" stop="60163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584212" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60365" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56485"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60205" stop="59977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268607" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60205" stop="59987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370074" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60164" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449324" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60142" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59999" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423812" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59978" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353825" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59951" stop="59881"/>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58054" stop="57886"/>
              <exon start="56519" stop="56021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612755" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57995" stop="57886"/>
              <exon start="56519" stop="56021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623030" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57974" stop="57886"/>
              <exon start="56519" stop="56021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558622" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56406" stop="55991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290904" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACATCAGAATCATTGGGTAGATGTTCCTCCTACTCCCGGAGCTCTCGTGGTCAATATAGGAGATATTCTACAG : CTTATAACGAATGACAAGTTCAAAAGTGTTGATCATAGAGTACTGGCTAATAAGGTCGGTCCAAGGGTATCGTTGGCATGCTTCTTCATGACAAACTTTGTGGCAACACAAAGGCTGTATGGACCTATAAAGGAGCTGATATCGGAACAGAATCCTCCAAACTACAGGGAAACGACGATTAAGGAGTTCACAACTCATTTCAATAACAAAGGGCTGGATGGCACTTCCACTCTGTTGCATTTTAGACTTTAGACTAAATTGTTCAAATAAGGTTTTGTAATACTATATATGTCAAACTAAGTATGCTCATTATGTAACCATCAATAAATTCTACTCATAGTAAGTAATTTTCATGATTATGTTTAGATTCATCGCTAA : AAAAAAAAAAGA : CTAATCTCTCAGTAATGGCTGAGCAAGGAAGCGCCGCCGCAGCTCCGTCGTCTGAGTTGAAAAGTCGGCCGGCCGGAAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTGTCAAAACCACCAGACATTTCACTTCTCCAAAATGCCCTTCACAAACTCCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCCTACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACCTCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCACAACTCATGGATGAACACCGGCACTTCATCAGATTCCGACACGGATATCTTCTTCGCCAGCATTTATCAATTAGAAAACGAAAAATCGGTGTTCGCTTTAAGGATTCATACATCGGTGTGTGATCGGGCGGCTGCATTGGCGGTGCTGAAGAAGTTATTGAAGCTGGTGAGTTGTGAGAAGGAAGATGAAGAAGGGACAGAATTGGAAATATTGAAAAAGATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGATGGTAAAGCGAGTAAACCATTTTGGGCGCGTGGGATTGATATGGTGGGGTATGGTTTGAATTCATTGAGATTTTGTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAACAAGAGACTGATCACATTCTTGAT : GGCTGTAAAACGAGAGGTATAAAACTGTGTGGACTATTGGCTGCTGCTGGATTAATTGCAGCTCATTCCTTAAAAGGCCTAAAGGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTTATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGCCCTGATTTTCCAG : GCTTTTATCATTCTGCCATCCTCAACACGCATGACGTTAAGGGAGGAGATGACTTATGGGAGCTAGCAAAGAGAAGTTACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAATCCCGGCTTAACTCCATCCTCTTCACTTAGAACTTCTCTGATCTCCGTGTTTGAAGACACTGTGATCGATACCTCCAGCACAATGCATCAAGAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATCAGGGACGGACATTTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGAGAGCAAATACAGGAGCTCATTGGTGAAATGAAAAAAATCCTTATTGACTGCTAGTATATTACTAAAACAAACACTATATTTTCCCACTCATCATGTTCAATGAAAATGCAGTAAGTTGTTTGTTTTTGACATCAAAAGTT</gDNA_template>
            <first_frame> T  S  E  S  L  G  R  C  S  S  Y  S  R  S  S  R  G  Q  Y  R  R  Y  S  T   : A  Y  N  E  *  Q  V  Q  K  C  *  S  *  S  T  G  *  *  G  R  S  K  G  I  V  G  M  L  L  H  D  K  L  C  G  N  T  K  A  V  W  T  Y  K  G  A  D  I  G  T  E  S  S  K  L  Q  G  N  D  D  *  G  V  H  N  S  F  Q  *  Q  R  A  G  W  H  F  H  S  V  A  F  *  T  L  D  *  I  V  Q  I  R  F  C  N  T  I  Y  V  K  L  S  M  L  I  M  *  P  S  I  N  S  T  H  S  K  *  F  S  *  L  C  L  D  S  S  L   : K  K  K  K   : T  N  L  S  V  M  A  E  Q  G  S  A  A  A  A  P  S  S  E  L  K  S  R  P  A  G  S  T  E  H  S  W  C  K  A  V  P  G  G  T  G  I  T  V  L  A  L  L  L  S  K  P  P  D  I  S  L  L  Q  N  A  L  H  K  L  Q  N  S  N  P  I  L  K  S  Q  L  H  Y  E  S  S  T  N  S  Y  S  Y  I  I  P  S  T  S  H  L  Q  I  Q  P  F  D  L  S  S  T  V  Q  I  L  R  R  L  K  T  S  D  L  T  S  V  S  D  F  H  L  I  L  E  H  E  I  N  H  N  S  W  M  N  T  G  T  S  S  D  S  D  T  D  I  F  F  A  S  I  Y  Q  L  E  N  E  K  S  V  F  A  L  R  I  H  T  S  V  C  D  R  A  A  A  L  A  V  L  K  K  L  L  K  L  V  S  C  E  K  E  D  E  E  G  T  E  L  E  I  L  K  K  M  E  V  G  L  G  I  E  E  Y  I  P  D  G  K  A  S  K  P  F  W  A  R  G  I  D  M  V  G  Y  G  L  N  S  L  R  F  C  N  L  K  F  M  D  S  E  S  T  R  G  S  Q  V  V  K  L  Q  L  N  K  Q  E  T  D  H  I  L  D  :  G  C  K  T  R  G  I  K  L  C  G  L  L  A  A  A  G  L  I  A  A  H  S  L  K  G  L  K  E  N  Q  W  E  K  Y  A  I  V  T  L  I  N  C  R  S  I  L  D  P  V  L  S  P  D  F  P   : G  F  Y  H  S  A  I  L  N  T  H  D  V  K  G  G  D  D  L  W  E  L  A  K  R  S  Y  T  S  F  I  N  A  K  N  N  N  K  H  F  T  D  M  G  D  L  N  F  L  M  C  R  A  I  D  N  P  G  L  T  P  S  S  S  L  R  T  S  L  I  S  V  F  E  D  T  V  I  D  T  S  S  T  M  H  Q  E  I  G  L  E  D  F  I  G  C  A  S  V  H  G  V  G  P  S  I  A  I  F  D  T  I  R  D  G  H  L  D  C  A  C  V  Y  P  F  P  L  H  T  R  E  Q  I  Q  E  L  I  G  E  M  K  K  I  L  I  D  C  *  Y  I  T  K  T  N  T  I  F  S  H  S  S  C  S  M  K  M  Q  *  V  V  C  F  *  H  Q  K   </first_frame>
            <second_frame>  H  Q  N  H  W  V  D  V  P  P  T  P  G  A  L  V  V  N  I  G  D  I  L  Q  :  L  I  T  N  D  K  F  K  S  V  D  H  R  V  L  A  N  K  V  G  P  R  V  S  L  A  C  F  F  M  T  N  F  V  A  T  Q  R  L  Y  G  P  I  K  E  L  I  S  E  Q  N  P  P  N  Y  R  E  T  T  I  K  E  F  T  T  H  F  N  N  K  G  L  D  G  T  S  T  L  L  H  F  R  L  *  T  K  L  F  K  *  G  F  V  I  L  Y  M  S  N  *  V  C  S  L  C  N  H  Q  *  I  L  L  I  V  S  N  F  H  D  Y  V  *  I  H  R  *  :  K  K  K  R  :  L  I  S  Q  *  W  L  S  K  E  A  P  P  Q  L  R  R  L  S  *  K  V  G  R  P  E  A  P  S  T  A  G  A  R  R  F  P  V  A  Q  V  *  Q  S  *  L  Y  S  C  Q  N  H  Q  T  F  H  F  S  K  M  P  F  T  N  S  K  I  P  I  L  S  S  N  L  N  S  I  T  N  Q  A  Q  I  P  T  L  T  S  F  P  P  L  L  I  F  K  S  S  R  S  I  S  H  Q  R  F  R  F  S  D  A  S  K  P  P  I  S  P  P  S  P  I  F  I  S  S  S  N  T  K  S  T  T  T  H  G  *  T  P  A  L  H  Q  I  P  T  R  I  S  S  S  P  A  F  I  N  *  K  T  K  N  R  C  S  L  *  G  F  I  H  R  C  V  I  G  R  L  H  W  R  C  *  R  S  Y  *  S  W  *  V  V  R  R  K  M  K  K  G  Q  N  W  K  Y  *  K  R  W  R  L  V  W  G  L  K  S  I  F  Q  M  V  K  R  V  N  H  F  G  R  V  G  L  I  W  W  G  M  V  *  I  H  *  D  F  V  I  *  S  L  W  I  R  N  Q  R  E  D  H  K  L  *  N  C  S  *  I  N  K  R  L  I  T  F  L  M :   A  V  K  R  E  V  *  N  C  V  D  Y  W  L  L  L  D  *  L  Q  L  I  P  *  K  A  *  R  R  I  N  G  R  S  M  Q  L  *  P  L  L  T  A  V  Q  F  L  I  Q  C  L  A  L  I  F  Q  :  A  F  I  I  L  P  S  S  T  R  M  T  L  R  E  E  M  T  Y  G  S  *  Q  R  E  V  T  H  L  L  S  T  P  R  T  I  T  S  I  S  Q  T  W  E  T  *  I  S  S  C  A  G  P  L  I  I  P  A  *  L  H  P  L  H  L  E  L  L  *  S  P  C  L  K  T  L  *  S  I  P  P  A  Q  C  I  K  K  S  D  *  K  T  S  S  G  V  H  P  C  M  G  *  A  L  L  L  P  Y  S  T  Q  S  G  T  D  I  W  I  V  H  V  F  I  P  S  P  C  I  L  E  S  K  Y  R  S  S  L  V  K  *  K  K  S  L  L  T  A  S  I  L  L  K  Q  T  L  Y  F  P  T  H  H  V  Q  *  K  C  S  K  L  F  V  F  D  I  K  S  </second_frame>
            <third_frame>   I  R  I  I  G  *  M  F  L  L  L  P  E  L  S  W  S  I  *  E  I  F  Y  S :   L  *  R  M  T  S  S  K  V  L  I  I  E  Y  W  L  I  R  S  V  Q  G  Y  R  W  H  A  S  S  *  Q  T  L  W  Q  H  K  G  C  M  D  L  *  R  S  *  Y  R  N  R  I  L  Q  T  T  G  K  R  R  L  R  S  S  Q  L  I  S  I  T  K  G  W  M  A  L  P  L  C  C  I  L  D  F  R  L  N  C  S  N  K  V  L  *  Y  Y  I  C  Q  T  K  Y  A  H  Y  V  T  I  N  K  F  Y  S  *  *  V  I  F  M  I  M  F  R  F  I  A  K :   K  K  K  D :   *  S  L  S  N  G  *  A  R  K  R  R  R  S  S  V  V  *  V  E  K  S  A  G  R  K  H  R  A  Q  L  V  Q  G  G  S  R  W  H  R  Y  N  S  L  S  S  T  L  V  K  T  T  R  H  F  T  S  P  K  C  P  S  Q  T  P  K  F  Q  S  Y  P  Q  I  S  T  P  L  R  I  K  H  K  F  L  L  L  H  H  S  L  H  F  S  S  S  N  P  A  V  R  S  L  I  N  G  S  D  S  P  T  P  Q  N  L  R  S  H  L  R  L  R  F  S  S  H  P  R  T  R  N  Q  P  Q  L  M  D  E  H  R  H  F  I  R  F  R  H  G  Y  L  L  R  Q  H  L  S  I  R  K  R  K  I  G  V  R  F  K  D  S  Y  I  G  V  *  S  G  G  C  I  G  G  A  E  E  V  I  E  A  G  E  L  *  E  G  R  *  R  R  D  R  I  G  N  I  E  K  D  G  G  W  F  G  D  *  R  V  Y  S  R  W  *  S  E  *  T  I  L  G  A  W  D  *  Y  G  G  V  W  F  E  F  I  E  I  L  *  F  E  V  Y  G  F  G  I  N  E  R  I  T  S  C  E  I  A  V  E  *  T  R  D  *  S  H  S  *   : W  L  *  N  E  R  Y  K  T  V  W  T  I  G  C  C  W  I  N  C  S  S  F  L  K  R  P  K  G  E  S  M  G  E  V  C  N  C  N  P  Y  *  L  P  F  N  S  *  S  S  A  *  P  *  F  S  R :   L  L  S  F  C  H  P  Q  H  A  *  R  *  G  R  R  *  L  M  G  A  S  K  E  K  L  H  I  F  Y  Q  R  Q  E  Q  *  Q  A  F  H  R  H  G  R  P  E  F  P  H  V  Q  G  H  *  *  S  R  L  N  S  I  L  F  T  *  N  F  S  D  L  R  V  *  R  H  C  D  R  Y  L  Q  H  N  A  S  R  N  R  I  R  R  L  H  R  V  C  I  R  A  W  G  R  P  F  Y  C  H  I  R  H  N  Q  G  R  T  F  G  L  C  M  C  L  S  L  P  L  A  Y  *  R  A  N  T  G  A  H  W  *  N  E  K  N  P  Y  *  L  L  V  Y  Y  *  N  K  H  Y  I  F  P  L  I  M  F  N  E  N  A  V  S  C  L  F  L  T  S  K  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61811" stop="61790"/>
                    <exon start="60807" stop="60796"/>
                    <exon start="60701" stop="59881"/>
                    <exon start="58054" stop="57886"/>
                    <exon start="56519" stop="56077"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1464</number_coding_nucleotides>
                  <number_encoded_amino_acids>488</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCLDSSLKKKKTNLSVMAEQGSAAAAPSSELKSRPAGSTEHSWCKAVPGGTGITVLALLLSKPPDISLLQNALHKLQNSNPILKSQLHYESSTNSYSYIIPSTSHLQIQPFDLSSTVQILRRLKTSDLTSVSDFHLILEHEINHNSWMNTGTSSDSDTDIFFASIYQLENEKSVFALRIHTSVCDRAAALAVLKKLLKLVSCEKEDEEGTELEILKKMEVGLGIEEYIPDGKASKPFWARGIDMVGYGLNSLRFCNLKFMDSESTRGSQVVKLQLNKQETDHILDGCKTRGIKLCGLLAAAGLIAAHSLKGLKENQWEKYAIVTLINCRSILDPVLSPDFPGFYHSAILNTHDVKGGDDLWELAKRSYTSFINAKNNNKHFTDMGDLNFLMCRAIDNPGLTPSSSLRTSLISVFEDTVIDTSSTMHQEIGLEDFIGCASVHGVGPSIAIFDTIRDGHLDCACVYPFPLHTREQIQELIGEMKKILIDC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62318" stop="62247"/>
                    <exon start="62167" stop="61916"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HQNHWVDVPPTPGALVVNIGDILQLITNDKFKSVDHRVLANKVGPRVSLACFFMTNFVATQRLYGPIKELISEQNPPNYRETTIKEFTTHFNNKGLDGTSTLLHFRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="63290" PGL_stop="62398"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63290" e_stop="62723"/>
            <exon e_start="62568" e_stop="62398"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.922" e_score="1.000"/>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="63290" e_stop="62723" e_length="568"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.922">
            <gDNA_intron_boundary i_start="62722" i_stop="62569" i_length="154"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="62568" e_stop="62398" e_length="171"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63290" stop="62723"/>
              <exon start="62568" stop="62398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344752" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTACTTCAAATATCAGCTAAGAAAAAAATGGAGTTGATCAACACAACTGAAGTCCAGGTTCCAAGAGAAGCAAAGTATGACAGGAAGGCTGAACTACAAGCTTTTGATGAGACGAAAACCGGTGTTAAGGGACTAGTCGATACAGGTATCACTAAAGTACCAAGAATGTTTGTTCAACCGTCAAGGATTGAAGATTCAACAATTCACAGCAACAAGAAGTTCAGTTTTCCAATAATTGATCTTGATGGTATCAAGGAAAATTCGATCAAACGAAAGAACATAGTCCAGGAAGTCGGTCAAGCATCCGAGACTTGGGGATTCTTTCAAGTGATCAATCATGGGATTCCTAGTCATCTTCTGGAGGAAATGAAAGACGGTGTTCTCAGTTTCTTTGAACAAGATACCGAGGAGAAGAAACAGTGGTATACGCGAGATTTGACAAAAGTGTTTACGTTTAACAGCAATTTCGACCTGTTTGGAGCACCAGTAACCAACTGGAGAGACACTTTTACTGCTACCACAGCTCCTATACCTCCAAAACCTGAAGAATTACCTTCTGTTTGCAG : GGATGTTCTCCTTGAGTACACAAACCAAGTGATGAAATTAGGTGATACTCTATTTGAAATACTGGCTGAAGCTATTGGCCTCGAACCAAATCACCTCAAGGACATGGGTTGTGCCGAGGGGCTTATGGCGTTAGGCCATTATTATCCAGCATGCCCACAACCAGAACTAAC</gDNA_template>
            <first_frame> F  Y  F  K  Y  Q  L  R  K  K  W  S  *  S  T  Q  L  K  S  R  F  Q  E  K  Q  S  M  T  G  R  L  N  Y  K  L  L  M  R  R  K  P  V  L  R  D  *  S  I  Q  V  S  L  K  Y  Q  E  C  L  F  N  R  Q  G  L  K  I  Q  Q  F  T  A  T  R  S  S  V  F  Q  *  L  I  L  M  V  S  R  K  I  R  S  N  E  R  T  *  S  R  K  S  V  K  H  P  R  L  G  D  S  F  K  *  S  I  M  G  F  L  V  I  F  W  R  K  *  K  T  V  F  S  V  S  L  N  K  I  P  R  R  R  N  S  G  I  R  E  I  *  Q  K  C  L  R  L  T  A  I  S  T  C  L  E  H  Q  *  P  T  G  E  T  L  L  L  L  P  Q  L  L  Y  L  Q  N  L  K  N  Y  L  L  F  A   : G  M  F  S  L  S  T  Q  T  K  *  *  N  *  V  I  L  Y  L  K  Y  W  L  K  L  L  A  S  N  Q  I  T  S  R  T  W  V  V  P  R  G  L  W  R  *  A  I  I  I  Q  H  A  H  N  Q  N  *  </first_frame>
            <second_frame>  F  T  S  N  I  S  *  E  K  N  G  V  D  Q  H  N  *  S  P  G  S  K  R  S  K  V  *  Q  E  G  *  T  T  S  F  *  *  D  E  N  R  C  *  G  T  S  R  Y  R  Y  H  *  S  T  K  N  V  C  S  T  V  K  D  *  R  F  N  N  S  Q  Q  Q  E  V  Q  F  S  N  N  *  S  *  W  Y  Q  G  K  F  D  Q  T  K  E  H  S  P  G  S  R  S  S  I  R  D  L  G  I  L  S  S  D  Q  S  W  D  S  *  S  S  S  G  G  N  E  R  R  C  S  Q  F  L  *  T  R  Y  R  G  E  E  T  V  V  Y  A  R  F  D  K  S  V  Y  V  *  Q  Q  F  R  P  V  W  S  T  S  N  Q  L  E  R  H  F  Y  C  Y  H  S  S  Y  T  S  K  T  *  R  I  T  F  C  L  Q  :  G  C  S  P  *  V  H  K  P  S  D  E  I  R  *  Y  S  I  *  N  T  G  *  S  Y  W  P  R  T  K  S  P  Q  G  H  G  L  C  R  G  A  Y  G  V  R  P  L  L  S  S  M  P  T  T  R  T  N </second_frame>
            <third_frame>   L  L  Q  I  S  A  K  K  K  M  E  L  I  N  T  T  E  V  Q  V  P  R  E  A  K  Y  D  R  K  A  E  L  Q  A  F  D  E  T  K  T  G  V  K  G  L  V  D  T  G  I  T  K  V  P  R  M  F  V  Q  P  S  R  I  E  D  S  T  I  H  S  N  K  K  F  S  F  P  I  I  D  L  D  G  I  K  E  N  S  I  K  R  K  N  I  V  Q  E  V  G  Q  A  S  E  T  W  G  F  F  Q  V  I  N  H  G  I  P  S  H  L  L  E  E  M  K  D  G  V  L  S  F  F  E  Q  D  T  E  E  K  K  Q  W  Y  T  R  D  L  T  K  V  F  T  F  N  S  N  F  D  L  F  G  A  P  V  T  N  W  R  D  T  F  T  A  T  T  A  P  I  P  P  K  P  E  E  L  P  S  V  C  R :   D  V  L  L  E  Y  T  N  Q  V  M  K  L  G  D  T  L  F  E  I  L  A  E  A  I  G  L  E  P  N  H  L  K  D  M  G  C  A  E  G  L  M  A  L  G  H  Y  Y  P  A  C  P  Q  P  E  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63288" stop="62723"/>
                    <exon start="62568" stop="62400"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLQISAKKKMELINTTEVQVPREAKYDRKAELQAFDETKTGVKGLVDTGITKVPRMFVQPSRIEDSTIHSNKKFSFPIIDLDGIKENSIKRKNIVQEVGQASETWGFFQVINHGIPSHLLEEMKDGVLSFFEQDTEEKKQWYTRDLTKVFTFNSNFDLFGAPVTNWRDTFTATTAPIPPKPEELPSVCRDVLLEYTNQVMKLGDTLFEILAEAIGLEPNHLKDMGCAEGLMALGHYYPACPQPEL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="67256" PGL_stop="65114"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67256" e_stop="66622"/>
            <exon e_start="66289" e_stop="65968"/>
            <exon e_start="65326" e_stop="65114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.652" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.943" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="67256" e_stop="66622" e_length="635"/>
          </exon>
          <intron i_serial="1" don_prob="0.652" acc_prob="0.981">
            <gDNA_intron_boundary i_start="66621" i_stop="66290" i_length="332"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66289" e_stop="65968" e_length="322"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.943">
            <gDNA_intron_boundary i_start="65967" i_stop="65327" i_length="641"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="65326" e_stop="65114" e_length="213"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67256" stop="66765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300999" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67245" stop="66759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67245" stop="66759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67120" stop="66622"/>
              <exon start="66289" stop="66271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308685" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67071" stop="66622"/>
              <exon start="66289" stop="65968"/>
              <exon start="65326" stop="65292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66952" stop="66622"/>
              <exon start="66289" stop="65968"/>
              <exon start="65326" stop="65114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705744" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCGGTTGGTGTCTGTTCTGATGGGAGGTAACATTTAGTGGACGCAAGCTAACCGAGACATCACTTTTGTTAAAGGGAAGAGTACTATATCCTATTGATGAATAATAGAACAAGATATATCAAGAAAATGGATACAAATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACGCGAGAGTTGACTAAAAGAGTAGTTTATAACAGTAACTTTGATTTGTATAATGCACCAGCAACTAATTGGAGGGATACTTTTTTCTGCATTATGGCTCCTAATCCTCCTAGTCCTGAAGAATTGCCTCCAATCTGTAG : GGATATCATTGTTAAATACTCTGAGGAAGTGAAGAAACTCGGGCGTTCTTTGTTTGAACTATTAGCAGAAGCACTTGGACTCAATAGAAACTATCTGAATGAAATGGATTGTGGTGAAGGACTTTCAGTTGTATGTCACTATTATCCAGCTTGTCCAGAACCAGAACTAACATTAGGTGCTAGTAAACACGCTGATGATGGATTCTTGACTTTGCTTCTTCAAGACCATATAGGGGGATTGCAAGTTCTTCATCGAAATCATTGGGTTGATGTCCCTCCTACCCCTGGTGCTCTTGTTGTAAATATTGCAGATCTTCTGCAG : TTAATATCAAATGACAAGTTTAAAAGCGTTGAACATCGTGTACTGGCAAATCGTGTTGGTCCAAGGATATCGATAGCATGCTTCTTCTCCACATTTTTTCTAGAAGCGTCAAGACTTTATGGTCCTATTAAGGAGTTGTTATCAGAAGAAAATCCGTCAAAATACAGAGAAACAACAATTCAGGAATATGCTGCCTATTTTACTGCAAAGGGA</gDNA_template>
            <first_frame> S  V  G  V  C  S  D  G  R  *  H  L  V  D  A  S  *  P  R  H  H  F  C  *  R  E  E  Y  Y  I  L  L  M  N  N  R  T  R  Y  I  K  K  M  D  T  N  E  S  K  H  D  R  K  S  E  L  K  A  F  D  D  T  K  S  G  V  K  G  L  V  D  A  G  V  S  K  V  P  Q  I  F  I  S  P  P  D  T  Y  S  N  S  N  T  G  Q  F  I  F  P  V  I  D  L  Q  D  M  D  S  H  D  Q  I  N  R  K  K  V  I  E  K  V  R  D  A  S  E  T  W  G  F  F  Q  V  I  N  H  G  V  P  C  D  V  M  E  E  M  I  R  G  V  C  S  F  H  E  Q  D  T  D  I  K  K  Q  W  Y  T  R  E  L  T  K  R  V  V  Y  N  S  N  F  D  L  Y  N  A  P  A  T  N  W  R  D  T  F  F  C  I  M  A  P  N  P  P  S  P  E  E  L  P  P  I  C  R :   D  I  I  V  K  Y  S  E  E  V  K  K  L  G  R  S  L  F  E  L  L  A  E  A  L  G  L  N  R  N  Y  L  N  E  M  D  C  G  E  G  L  S  V  V  C  H  Y  Y  P  A  C  P  E  P  E  L  T  L  G  A  S  K  H  A  D  D  G  F  L  T  L  L  L  Q  D  H  I  G  G  L  Q  V  L  H  R  N  H  W  V  D  V  P  P  T  P  G  A  L  V  V  N  I  A  D  L  L  Q  :  L  I  S  N  D  K  F  K  S  V  E  H  R  V  L  A  N  R  V  G  P  R  I  S  I  A  C  F  F  S  T  F  F  L  E  A  S  R  L  Y  G  P  I  K  E  L  L  S  E  E  N  P  S  K  Y  R  E  T  T  I  Q  E  Y  A  A  Y  F  T  A  K  G </first_frame>
            <second_frame>  R  L  V  S  V  L  M  G  G  N  I  *  W  T  Q  A  N  R  D  I  T  F  V  K  G  K  S  T  I  S  Y  *  *  I  I  E  Q  D  I  S  R  K  W  I  Q  M  N  Q  N  M  I  E  K  V  S  *  K  P  L  M  T  Q  N  L  V  S  K  D  L  L  M  Q  E  *  V  K  S  L  R  Y  S  F  H  L  Q  I  H  T  Q  I  P  T  Q  D  S  S  F  F  Q  L  *  T  S  K  I  W  I  V  T  I  K  S  I  E  K  K  S  L  R  K  S  A  M  H  Q  R  H  G  V  S  F  K  *  S  I  M  A  F  R  V  M  L  W  K  K  *  Y  E  V  F  V  V  F  M  N  K  I  L  I  S  R  S  N  G  I  R  E  S  *  L  K  E  *  F  I  T  V  T  L  I  C  I  M  H  Q  Q  L  I  G  G  I  L  F  S  A  L  W  L  L  I  L  L  V  L  K  N  C  L  Q  S  V   : G  I  S  L  L  N  T  L  R  K  *  R  N  S  G  V  L  C  L  N  Y  *  Q  K  H  L  D  S  I  E  T  I  *  M  K  W  I  V  V  K  D  F  Q  L  Y  V  T  I  I  Q  L  V  Q  N  Q  N  *  H  *  V  L  V  N  T  L  M  M  D  S  *  L  C  F  F  K  T  I  *  G  D  C  K  F  F  I  E  I  I  G  L  M  S  L  L  P  L  V  L  L  L  *  I  L  Q  I  F  C  S :   *  Y  Q  M  T  S  L  K  A  L  N  I  V  Y  W  Q  I  V  L  V  Q  G  Y  R  *  H  A  S  S  P  H  F  F  *  K  R  Q  D  F  M  V  L  L  R  S  C  Y  Q  K  K  I  R  Q  N  T  E  K  Q  Q  F  R  N  M  L  P  I  L  L  Q  R   </second_frame>
            <third_frame>   G  W  C  L  F  *  W  E  V  T  F  S  G  R  K  L  T  E  T  S  L  L  L  K  G  R  V  L  Y  P  I  D  E  *  *  N  K  I  Y  Q  E  N  G  Y  K  *  I  K  T  *  *  K  K  *  V  K  S  L  *  *  H  K  I  W  C  Q  R  T  C  *  C  R  S  K  *  S  P  S  D  I  H  F  T  S  R  Y  I  L  K  F  Q  H  R  T  V  H  F  S  S  Y  R  P  P  R  Y  G  *  S  R  S  N  Q  S  K  K  S  H  *  E  S  P  R  C  I  R  D  M  G  F  L  S  S  D  Q  S  W  R  S  V  *  C  Y  G  R  N  D  T  R  C  L  *  F  S  *  T  R  Y  *  Y  Q  E  A  M  V  Y  A  R  V  D  *  K  S  S  L  *  Q  *  L  *  F  V  *  C  T  S  N  *  L  E  G  Y  F  F  L  H  Y  G  S  *  S  S  *  S  *  R  I  A  S  N  L  *  :  G  Y  H  C  *  I  L  *  G  S  E  E  T  R  A  F  F  V  *  T  I  S  R  S  T  W  T  Q  *  K  L  S  E  *  N  G  L  W  *  R  T  F  S  C  M  S  L  L  S  S  L  S  R  T  R  T  N  I  R  C  *  *  T  R  *  *  W  I  L  D  F  A  S  S  R  P  Y  R  G  I  A  S  S  S  S  K  S  L  G  *  C  P  S  Y  P  W  C  S  C  C  K  Y  C  R  S  S  A   : V  N  I  K  *  Q  V  *  K  R  *  T  S  C  T  G  K  S  C  W  S  K  D  I  D  S  M  L  L  L  H  I  F  S  R  S  V  K  T  L  W  S  Y  *  G  V  V  I  R  R  K  S  V  K  I  Q  R  N  N  N  S  G  I  C  C  L  F  Y  C  K  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67184" stop="66622"/>
                    <exon start="66289" stop="65968"/>
                    <exon start="65326" stop="65114"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1098</number_coding_nucleotides>
                  <number_encoded_amino_acids>366</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REEYYILLMNNRTRYIKKMDTNESKHDRKSELKAFDDTKSGVKGLVDAGVSKVPQIFISPPDTYSNSNTGQFIFPVIDLQDMDSHDQINRKKVIEKVRDASETWGFFQVINHGVPCDVMEEMIRGVCSFHEQDTDIKKQWYTRELTKRVVYNSNFDLYNAPATNWRDTFFCIMAPNPPSPEELPPICRDIIVKYSEEVKKLGRSLFELLAEALGLNRNYLNEMDCGEGLSVVCHYYPACPEPELTLGASKHADDGFLTLLLQDHIGGLQVLHRNHWVDVPPTPGALVVNIADLLQLISNDKFKSVEHRVLANRVGPRISIACFFSTFFLEASRLYGPIKELLSEENPSKYRETTIQEYAAYFTAKG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="67256" e_stop="66622"/>
            <exon e_start="66289" e_stop="65938"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.652" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="67256" e_stop="66622" e_length="635"/>
          </exon>
          <intron i_serial="1" don_prob="0.652" acc_prob="0.981">
            <gDNA_intron_boundary i_start="66621" i_stop="66290" i_length="332"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66289" e_stop="65938" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67256" stop="66765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300999" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67245" stop="66759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67245" stop="66759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67121" stop="66622"/>
              <exon start="66289" stop="65938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708905" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67120" stop="66622"/>
              <exon start="66289" stop="66271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308685" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCGGTTGGTGTCTGTTCTGATGGGAGGTAACATTTAGTGGACGCAAGCTAACCGAGACATCACTTTTGTTAAAGGGAAGAGTACTATATCCTATTGATGAATAATAGAACAAGATATATCAAGAAAATGGATACAAATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAAATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGACAGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATACTGATATCAAGAAGCAATGGTATACGCGAGAGTTGACTAAAAGAGTAGTTTATAACAGTAACTTTGATTTGTATAATGCACCAGCAACTAATTGGAGGGATACTTTTTTCTGCATTATGGCTCCTAATCCTCCTAGTCCTGAAGAATTGCCTCCAATCTGTAG : GGATATCATTGTTAAATACTCTGAGGAAGTGAAGAAACTCGGGCGTTCTTTGTTTGAACTATTAGCAGAAGCACTTGGACTCAATAGAAACTATCTGAATGAAATGGATTGTGGTGAAGGACTTTCAGTTGTATGTCACTATTATCCAGCTTGTCCAGAACCAGAACTAACATTAGGTGCTAGTAAACACGCTGATGATGGATTCTTGACTTTGCTTCTTCAAGACCATATAGGGGGATTGCAAGTTCTTCATCGAAATCATTGGGTTGATGTCCCTCCTACCCCTGGTGCTCTTGTTGTAAATATTGCAGATCTTCTGCAGGTATGTCTTCTCACCTATCTGTACTGAAAA</gDNA_template>
            <first_frame> S  V  G  V  C  S  D  G  R  *  H  L  V  D  A  S  *  P  R  H  H  F  C  *  R  E  E  Y  Y  I  L  L  M  N  N  R  T  R  Y  I  K  K  M  D  T  N  E  S  K  H  D  R  K  S  E  L  K  A  F  D  D  T  K  S  G  V  K  G  L  V  D  A  G  V  S  K  V  P  Q  I  F  I  S  P  P  D  T  Y  S  N  S  N  T  G  Q  F  I  F  P  V  I  D  L  Q  D  M  D  S  H  D  Q  I  N  R  K  K  V  I  E  K  V  R  D  A  S  E  T  W  G  F  F  Q  V  I  N  H  G  V  P  C  D  V  M  E  E  M  I  R  G  V  C  S  F  H  E  Q  D  T  D  I  K  K  Q  W  Y  T  R  E  L  T  K  R  V  V  Y  N  S  N  F  D  L  Y  N  A  P  A  T  N  W  R  D  T  F  F  C  I  M  A  P  N  P  P  S  P  E  E  L  P  P  I  C  R :   D  I  I  V  K  Y  S  E  E  V  K  K  L  G  R  S  L  F  E  L  L  A  E  A  L  G  L  N  R  N  Y  L  N  E  M  D  C  G  E  G  L  S  V  V  C  H  Y  Y  P  A  C  P  E  P  E  L  T  L  G  A  S  K  H  A  D  D  G  F  L  T  L  L  L  Q  D  H  I  G  G  L  Q  V  L  H  R  N  H  W  V  D  V  P  P  T  P  G  A  L  V  V  N  I  A  D  L  L  Q  V  C  L  L  T  Y  L  Y  *  K </first_frame>
            <second_frame>  R  L  V  S  V  L  M  G  G  N  I  *  W  T  Q  A  N  R  D  I  T  F  V  K  G  K  S  T  I  S  Y  *  *  I  I  E  Q  D  I  S  R  K  W  I  Q  M  N  Q  N  M  I  E  K  V  S  *  K  P  L  M  T  Q  N  L  V  S  K  D  L  L  M  Q  E  *  V  K  S  L  R  Y  S  F  H  L  Q  I  H  T  Q  I  P  T  Q  D  S  S  F  F  Q  L  *  T  S  K  I  W  I  V  T  I  K  S  I  E  K  K  S  L  R  K  S  A  M  H  Q  R  H  G  V  S  F  K  *  S  I  M  A  F  R  V  M  L  W  K  K  *  Y  E  V  F  V  V  F  M  N  K  I  L  I  S  R  S  N  G  I  R  E  S  *  L  K  E  *  F  I  T  V  T  L  I  C  I  M  H  Q  Q  L  I  G  G  I  L  F  S  A  L  W  L  L  I  L  L  V  L  K  N  C  L  Q  S  V   : G  I  S  L  L  N  T  L  R  K  *  R  N  S  G  V  L  C  L  N  Y  *  Q  K  H  L  D  S  I  E  T  I  *  M  K  W  I  V  V  K  D  F  Q  L  Y  V  T  I  I  Q  L  V  Q  N  Q  N  *  H  *  V  L  V  N  T  L  M  M  D  S  *  L  C  F  F  K  T  I  *  G  D  C  K  F  F  I  E  I  I  G  L  M  S  L  L  P  L  V  L  L  L  *  I  L  Q  I  F  C  R  Y  V  F  S  P  I  C  T  E   </second_frame>
            <third_frame>   G  W  C  L  F  *  W  E  V  T  F  S  G  R  K  L  T  E  T  S  L  L  L  K  G  R  V  L  Y  P  I  D  E  *  *  N  K  I  Y  Q  E  N  G  Y  K  *  I  K  T  *  *  K  K  *  V  K  S  L  *  *  H  K  I  W  C  Q  R  T  C  *  C  R  S  K  *  S  P  S  D  I  H  F  T  S  R  Y  I  L  K  F  Q  H  R  T  V  H  F  S  S  Y  R  P  P  R  Y  G  *  S  R  S  N  Q  S  K  K  S  H  *  E  S  P  R  C  I  R  D  M  G  F  L  S  S  D  Q  S  W  R  S  V  *  C  Y  G  R  N  D  T  R  C  L  *  F  S  *  T  R  Y  *  Y  Q  E  A  M  V  Y  A  R  V  D  *  K  S  S  L  *  Q  *  L  *  F  V  *  C  T  S  N  *  L  E  G  Y  F  F  L  H  Y  G  S  *  S  S  *  S  *  R  I  A  S  N  L  *  :  G  Y  H  C  *  I  L  *  G  S  E  E  T  R  A  F  F  V  *  T  I  S  R  S  T  W  T  Q  *  K  L  S  E  *  N  G  L  W  *  R  T  F  S  C  M  S  L  L  S  S  L  S  R  T  R  T  N  I  R  C  *  *  T  R  *  *  W  I  L  D  F  A  S  S  R  P  Y  R  G  I  A  S  S  S  S  K  S  L  G  *  C  P  S  Y  P  W  C  S  C  C  K  Y  C  R  S  S  A  G  M  S  S  H  L  S  V  L  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67184" stop="66622"/>
                    <exon start="66289" stop="65941"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>909</number_coding_nucleotides>
                  <number_encoded_amino_acids>303</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REEYYILLMNNRTRYIKKMDTNESKHDRKSELKAFDDTKSGVKGLVDAGVSKVPQIFISPPDTYSNSNTGQFIFPVIDLQDMDSHDQINRKKVIEKVRDASETWGFFQVINHGVPCDVMEEMIRGVCSFHEQDTDIKKQWYTRELTKRVVYNSNFDLYNAPATNWRDTFFCIMAPNPPSPEELPPICRDIIVKYSEEVKKLGRSLFELLAEALGLNRNYLNEMDCGEGLSVVCHYYPACPEPELTLGASKHADDGFLTLLLQDHIGGLQVLHRNHWVDVPPTPGALVVNIADLLQVCLLTYLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="68107" PGL_stop="70091"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68114" e_stop="68178"/>
            <exon e_start="69093" e_stop="70091"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.773" acc_prob="0.938" e_score="0.981"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="68114" e_stop="68178" e_length="65"/>
          </exon>
          <intron i_serial="1" don_prob="0.773" acc_prob="0.938">
            <gDNA_intron_boundary i_start="68179" i_stop="69092" i_length="914"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="69093" e_stop="70091" e_length="999"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68114" stop="68178"/>
              <exon start="69093" stop="69531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68114" stop="68178"/>
              <exon start="69093" stop="69444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437647" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68118" stop="68178"/>
              <exon start="69093" stop="69653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68118" stop="68178"/>
              <exon start="69093" stop="69646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68118" stop="68178"/>
              <exon start="69093" stop="69574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68118" stop="68178"/>
              <exon start="69093" stop="69554"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68118" stop="68178"/>
              <exon start="69093" stop="69525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68125" stop="68178"/>
              <exon start="69093" stop="69639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69113" stop="69621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262560" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260421" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69169" stop="69563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69262" stop="69720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472552" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69333" stop="69908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69333" stop="69738"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69442" stop="70052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353860" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69604" stop="70091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292488" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCAGTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAA : GAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTTAGCAGGTTCCCTCATCCTGCATTTCTTCTTTTTTCACAACGGAACATGCCAAAATTAACATAATTTCTCTTTGTTGGATTTAGTTTCTTGGGTTAGGACGATCACGTTTTGTTTAATAGGTTTCGTGCTTTTTACAGCTTTGAATAGGCATGTTGATTACAATATTTTGTATCTGATCTTGCTGCTAGACTGTTAAGAATTCGAAATAATCTCGTGGAATTAATTTAGGTGCACTTGAGCTTGCCCCTAACA</gDNA_template>
            <first_frame> A  S  S  H  C  T  R  R  N  L  S  R  R  R  S  L  S  P  E  D  L  K :   S  E  C  K  A  Q  V  L  P  S  G  *  S  G  N  Y  P  S  S  F  A  L  A  Q  H  A  Y  E  I  L  I  K  L  T  S  F  A  I  H  C  L  E  S  D  I  L  S  M  K  L  I  A  R  L  R  P  I  Q  T  C  T  A  L  R  E  I  I  G  P  L  Q  S  R  S  F  Q  P  D  F  V  P  R  D  P  N  V  K  P  I  R  Y  K  Y  P  A  A  Y  D  P  Y  G  P  R  P  P  P  S  D  K  I  V  Q  L  A  E  R  I  A  A  L  A  P  E  E  R  R  Q  I  G  P  L  L  R  E  I  L  R  H  P  T  L  K  P  I  S  V  E  G  M  D  L  G  A  M  G  G  A  G  G  G  P  A  K  A  E  E  K  K  V  E  K  T  A  F  D  V  K  L  E  K  F  D  A  A  A  K  I  K  V  I  K  E  V  R  S  F  T  S  L  G  L  K  E  A  K  D  L  V  E  K  V  P  A  I  L  K  Q  G  V  T  K  E  E  A  N  E  I  I  E  K  I  K  A  V  G  G  V  A  V  M  E  *  Q  Q  S  L  L  D  L  A  G  S  L  I  L  H  F  F  F  F  H  N  G  T  C  Q  N  *  H  N  F  S  L  L  D  L  V  S  W  V  R  T  I  T  F  C  L  I  G  F  V  L  F  T  A  L  N  R  H  V  D  Y  N  I  L  Y  L  I  L  L  L  D  C  *  E  F  E  I  I  S  W  N  *  F  R  C  T  *  A  C  P  *   </first_frame>
            <second_frame>  P  V  H  T  A  L  A  G  I  S  H  G  G  D  L  F  L  R  R  I  *   : R  V  S  V  K  H  K  F  Y  Q  V  V  E  V  E  I  I  R  V  L  L  H  *  H  N  T  R  M  K  F  *  S  S  *  H  H  L  Q  F  I  A  W  K  V  I  S  *  A  *  S  S  *  H  G  *  D  P  S  K  P  V  Q  L  F  V  K  L  *  G  L  C  S  L  V  R  F  N  L  I  L  F  P  E  I  L  M  S  S  P  *  G  T  N  I  L  L  P  M  I  H  M  A  R  D  P  H  H  Q  T  R  *  F  S  L  L  N  V  L  L  L  *  P  Q  K  N  V  D  K  L  V  L  Y  S  G  R  Y  *  G  T  L  L  *  N  Q  F  Q  *  K  A  W  I  W  V  Q  W  E  E  Q  V  V  D  R  Q  R  L  R  R  R  R  L  R  K  Q  H  L  T  *  S  *  R  N  L  M  Q  L  R  K  S  R  *  S  K  R  L  D  P  S  R  V  *  V  *  R  K  P  R  T  L  S  K  R  F  L  L  Y  L  S  K  E  *  P  K  R  K  L  M  K  *  *  K  R  S  K  L  L  E  E  S  P  L  W  S  N  N  N  L  C  W  I  *  Q  V  P  S  S  C  I  S  S  F  F  T  T  E  H  A  K  I  N  I  I  S  L  C  W  I  *  F  L  G  L  G  R  S  R  F  V  *  *  V  S  C  F  L  Q  L  *  I  G  M  L  I  T  I  F  C  I  *  S  C  C  *  T  V  K  N  S  K  *  S  R  G  I  N  L  G  A  L  E  L  A  P  N  </second_frame>
            <third_frame>   Q  F  T  L  H  S  P  E  S  L  T  A  A  I  S  F  S  G  G  F  K  :  E  *  V  *  S  T  S  F  T  K  W  L  K  W  K  L  S  E  F  F  C  I  S  T  T  R  V  *  N  S  D  Q  A  N  I  I  C  N  S  L  L  G  K  *  Y  L  K  H  E  A  H  S  T  V  K  T  H  P  N  L  Y  S  S  S  *  N  Y  R  A  S  A  V  S  F  V  S  T  *  F  C  S  Q  R  S  *  C  Q  A  H  K  V  Q  I  S  C  C  L  *  S  I  W  P  E  T  P  T  I  R  Q  D  S  S  A  C  *  T  Y  C  C  F  S  P  R  R  T  *  T  N  W  S  F  T  Q  G  D  T  K  A  P  Y  F  E  T  N  F  S  R  R  H  G  F  G  C  N  G  R  S  R  W  W  T  G  K  G  *  G  E  E  G  *  E  N  S  I  *  R  E  V  R  E  I  *  C  S  C  E  N  Q  G  D  Q  R  G  *  I  L  H  E  S  R  S  E  G  S  Q  G  P  C  R  K  G  S  C  Y  T  *  A  R  S  N  Q  R  G  S  *  *  N  N  R  K  D  Q  S  C  W  R  S  R  R  Y  G  V  T  T  I  S  V  G  F  S  R  F  P  H  P  A  F  L  L  F  S  Q  R  N  M  P  K  L  T  *  F  L  F  V  G  F  S  F  L  G  *  D  D  H  V  L  F  N  R  F  R  A  F  Y  S  F  E  *  A  C  *  L  Q  Y  F  V  S  D  L  A  A  R  L  L  R  I  R  N  N  L  V  E  L  I  *  V  H  L  S  L  P  L  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69130" stop="69819"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGNYPSSFALAQHAYEILIKLTSFAIHCLESDILSMKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNVKPIRYKYPAAYDPYGPRPPPSDKIVQLAERIAALAPEERRQIGPLLREILRHPTLKPISVEGMDLGAMGGAGGGPAKAEEKKVEKTAFDVKLEKFDAAAKIKVIKEVRSFTSLGLKEAKDLVEKVPAILKQGVTKEEANEIIEKIKAVGGVAVME*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="68124" e_stop="68224"/>
            <exon e_start="69089" e_stop="70091"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.604" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68124" e_stop="68224" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.604" acc_prob="0.989">
            <gDNA_intron_boundary i_start="68225" i_stop="69088" i_length="864"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="69089" e_stop="70091" e_length="1003"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68124" stop="68224"/>
              <exon start="69089" stop="69269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68142" stop="68224"/>
              <exon start="69089" stop="69646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321546" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69113" stop="69621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262560" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260421" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69169" stop="69563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69262" stop="69720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472552" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69333" stop="69908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69333" stop="69738"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69442" stop="70052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353860" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69604" stop="70091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292488" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTG : GCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTTAGCAGGTTCCCTCATCCTGCATTTCTTCTTTTTTCACAACGGAACATGCCAAAATTAACATAATTTCTCTTTGTTGGATTTAGTTTCTTGGGTTAGGACGATCACGTTTTGTTTAATAGGTTTCGTGCTTTTTACAGCTTTGAATAGGCATGTTGATTACAATATTTTGTATCTGATCTTGCTGCTAGACTGTTAAGAATTCGAAATAATCTCGTGGAATTAATTTAGGTGCACTTGAGCTTGCCCCTAACA</gDNA_template>
            <first_frame> T  A  L  A  G  I  S  H  G  G  D  L  F  L  R  R  I  *  S  P  K  S  L  H  L  Y  L  Q  F  T  N  S  L  W :   Q  E  *  V  *  S  T  S  F  T  K  W  L  K  W  K  L  S  E  F  F  C  I  S  T  T  R  V  *  N  S  D  Q  A  N  I  I  C  N  S  L  L  G  K  *  Y  L  K  H  E  A  H  S  T  V  K  T  H  P  N  L  Y  S  S  S  *  N  Y  R  A  S  A  V  S  F  V  S  T  *  F  C  S  Q  R  S  *  C  Q  A  H  K  V  Q  I  S  C  C  L  *  S  I  W  P  E  T  P  T  I  R  Q  D  S  S  A  C  *  T  Y  C  C  F  S  P  R  R  T  *  T  N  W  S  F  T  Q  G  D  T  K  A  P  Y  F  E  T  N  F  S  R  R  H  G  F  G  C  N  G  R  S  R  W  W  T  G  K  G  *  G  E  E  G  *  E  N  S  I  *  R  E  V  R  E  I  *  C  S  C  E  N  Q  G  D  Q  R  G  *  I  L  H  E  S  R  S  E  G  S  Q  G  P  C  R  K  G  S  C  Y  T  *  A  R  S  N  Q  R  G  S  *  *  N  N  R  K  D  Q  S  C  W  R  S  R  R  Y  G  V  T  T  I  S  V  G  F  S  R  F  P  H  P  A  F  L  L  F  S  Q  R  N  M  P  K  L  T  *  F  L  F  V  G  F  S  F  L  G  *  D  D  H  V  L  F  N  R  F  R  A  F  Y  S  F  E  *  A  C  *  L  Q  Y  F  V  S  D  L  A  A  R  L  L  R  I  R  N  N  L  V  E  L  I  *  V  H  L  S  L  P  L  T </first_frame>
            <second_frame>  L  H  S  P  E  S  L  T  A  A  I  S  F  S  G  G  F  K  V  L  S  L  F  I  Y  I  F  N  S  R  I  P  F   : G  R  S  E  C  K  A  Q  V  L  P  S  G  *  S  G  N  Y  P  S  S  F  A  L  A  Q  H  A  Y  E  I  L  I  K  L  T  S  F  A  I  H  C  L  E  S  D  I  L  S  M  K  L  I  A  R  L  R  P  I  Q  T  C  T  A  L  R  E  I  I  G  P  L  Q  S  R  S  F  Q  P  D  F  V  P  R  D  P  N  V  K  P  I  R  Y  K  Y  P  A  A  Y  D  P  Y  G  P  R  P  P  P  S  D  K  I  V  Q  L  A  E  R  I  A  A  L  A  P  E  E  R  R  Q  I  G  P  L  L  R  E  I  L  R  H  P  T  L  K  P  I  S  V  E  G  M  D  L  G  A  M  G  G  A  G  G  G  P  A  K  A  E  E  K  K  V  E  K  T  A  F  D  V  K  L  E  K  F  D  A  A  A  K  I  K  V  I  K  E  V  R  S  F  T  S  L  G  L  K  E  A  K  D  L  V  E  K  V  P  A  I  L  K  Q  G  V  T  K  E  E  A  N  E  I  I  E  K  I  K  A  V  G  G  V  A  V  M  E  *  Q  Q  S  L  L  D  L  A  G  S  L  I  L  H  F  F  F  F  H  N  G  T  C  Q  N  *  H  N  F  S  L  L  D  L  V  S  W  V  R  T  I  T  F  C  L  I  G  F  V  L  F  T  A  L  N  R  H  V  D  Y  N  I  L  Y  L  I  L  L  L  D  C  *  E  F  E  I  I  S  W  N  *  F  R  C  T  *  A  C  P  *   </second_frame>
            <third_frame>   C  T  R  R  N  L  S  R  R  R  S  L  S  P  E  D  L  K  S  *  V  S  S  F  I  S  S  I  H  E  F  P  L  :  A  G  V  S  V  K  H  K  F  Y  Q  V  V  E  V  E  I  I  R  V  L  L  H  *  H  N  T  R  M  K  F  *  S  S  *  H  H  L  Q  F  I  A  W  K  V  I  S  *  A  *  S  S  *  H  G  *  D  P  S  K  P  V  Q  L  F  V  K  L  *  G  L  C  S  L  V  R  F  N  L  I  L  F  P  E  I  L  M  S  S  P  *  G  T  N  I  L  L  P  M  I  H  M  A  R  D  P  H  H  Q  T  R  *  F  S  L  L  N  V  L  L  L  *  P  Q  K  N  V  D  K  L  V  L  Y  S  G  R  Y  *  G  T  L  L  *  N  Q  F  Q  *  K  A  W  I  W  V  Q  W  E  E  Q  V  V  D  R  Q  R  L  R  R  R  R  L  R  K  Q  H  L  T  *  S  *  R  N  L  M  Q  L  R  K  S  R  *  S  K  R  L  D  P  S  R  V  *  V  *  R  K  P  R  T  L  S  K  R  F  L  L  Y  L  S  K  E  *  P  K  R  K  L  M  K  *  *  K  R  S  K  L  L  E  E  S  P  L  W  S  N  N  N  L  C  W  I  *  Q  V  P  S  S  C  I  S  S  F  F  T  T  E  H  A  K  I  N  I  I  S  L  C  W  I  *  F  L  G  L  G  R  S  R  F  V  *  *  V  S  C  F  L  Q  L  *  I  G  M  L  I  T  I  F  C  I  *  S  C  C  *  T  V  K  N  S  K  *  S  R  G  I  N  L  G  A  L  E  L  A  P  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69130" stop="69819"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGNYPSSFALAQHAYEILIKLTSFAIHCLESDILSMKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNVKPIRYKYPAAYDPYGPRPPPSDKIVQLAERIAALAPEERRQIGPLLREILRHPTLKPISVEGMDLGAMGGAGGGPAKAEEKKVEKTAFDVKLEKFDAAAKIKVIKEVRSFTSLGLKEAKDLVEKVPAILKQGVTKEEANEIIEKIKAVGGVAVME*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="68117" e_stop="68178"/>
            <exon e_start="69089" e_stop="70091"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.773" acc_prob="0.989" e_score="0.935"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="68117" e_stop="68178" e_length="62"/>
          </exon>
          <intron i_serial="1" don_prob="0.773" acc_prob="0.989">
            <gDNA_intron_boundary i_start="68179" i_stop="69088" i_length="910"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="69089" e_stop="70091" e_length="1003"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68117" stop="68178"/>
              <exon start="69089" stop="69562"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68120" stop="68178"/>
              <exon start="69089" stop="69547"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447356" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69113" stop="69621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262560" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260421" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69169" stop="69563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69262" stop="69720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472552" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69333" stop="69908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69333" stop="69738"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69442" stop="70052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353860" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69604" stop="70091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292488" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAA : GCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTTAGCAGGTTCCCTCATCCTGCATTTCTTCTTTTTTCACAACGGAACATGCCAAAATTAACATAATTTCTCTTTGTTGGATTTAGTTTCTTGGGTTAGGACGATCACGTTTTGTTTAATAGGTTTCGTGCTTTTTACAGCTTTGAATAGGCATGTTGATTACAATATTTTGTATCTGATCTTGCTGCTAGACTGTTAAGAATTCGAAATAATCTCGTGGAATTAATTTAGGTGCACTTGAGCTTGCCCCTAACA</gDNA_template>
            <first_frame> S  S  H  C  T  R  R  N  L  S  R  R  R  S  L  S  P  E  D  L  K :   Q  E  *  V  *  S  T  S  F  T  K  W  L  K  W  K  L  S  E  F  F  C  I  S  T  T  R  V  *  N  S  D  Q  A  N  I  I  C  N  S  L  L  G  K  *  Y  L  K  H  E  A  H  S  T  V  K  T  H  P  N  L  Y  S  S  S  *  N  Y  R  A  S  A  V  S  F  V  S  T  *  F  C  S  Q  R  S  *  C  Q  A  H  K  V  Q  I  S  C  C  L  *  S  I  W  P  E  T  P  T  I  R  Q  D  S  S  A  C  *  T  Y  C  C  F  S  P  R  R  T  *  T  N  W  S  F  T  Q  G  D  T  K  A  P  Y  F  E  T  N  F  S  R  R  H  G  F  G  C  N  G  R  S  R  W  W  T  G  K  G  *  G  E  E  G  *  E  N  S  I  *  R  E  V  R  E  I  *  C  S  C  E  N  Q  G  D  Q  R  G  *  I  L  H  E  S  R  S  E  G  S  Q  G  P  C  R  K  G  S  C  Y  T  *  A  R  S  N  Q  R  G  S  *  *  N  N  R  K  D  Q  S  C  W  R  S  R  R  Y  G  V  T  T  I  S  V  G  F  S  R  F  P  H  P  A  F  L  L  F  S  Q  R  N  M  P  K  L  T  *  F  L  F  V  G  F  S  F  L  G  *  D  D  H  V  L  F  N  R  F  R  A  F  Y  S  F  E  *  A  C  *  L  Q  Y  F  V  S  D  L  A  A  R  L  L  R  I  R  N  N  L  V  E  L  I  *  V  H  L  S  L  P  L  T </first_frame>
            <second_frame>  V  H  T  A  L  A  G  I  S  H  G  G  D  L  F  L  R  R  I  *   : S  R  S  E  C  K  A  Q  V  L  P  S  G  *  S  G  N  Y  P  S  S  F  A  L  A  Q  H  A  Y  E  I  L  I  K  L  T  S  F  A  I  H  C  L  E  S  D  I  L  S  M  K  L  I  A  R  L  R  P  I  Q  T  C  T  A  L  R  E  I  I  G  P  L  Q  S  R  S  F  Q  P  D  F  V  P  R  D  P  N  V  K  P  I  R  Y  K  Y  P  A  A  Y  D  P  Y  G  P  R  P  P  P  S  D  K  I  V  Q  L  A  E  R  I  A  A  L  A  P  E  E  R  R  Q  I  G  P  L  L  R  E  I  L  R  H  P  T  L  K  P  I  S  V  E  G  M  D  L  G  A  M  G  G  A  G  G  G  P  A  K  A  E  E  K  K  V  E  K  T  A  F  D  V  K  L  E  K  F  D  A  A  A  K  I  K  V  I  K  E  V  R  S  F  T  S  L  G  L  K  E  A  K  D  L  V  E  K  V  P  A  I  L  K  Q  G  V  T  K  E  E  A  N  E  I  I  E  K  I  K  A  V  G  G  V  A  V  M  E  *  Q  Q  S  L  L  D  L  A  G  S  L  I  L  H  F  F  F  F  H  N  G  T  C  Q  N  *  H  N  F  S  L  L  D  L  V  S  W  V  R  T  I  T  F  C  L  I  G  F  V  L  F  T  A  L  N  R  H  V  D  Y  N  I  L  Y  L  I  L  L  L  D  C  *  E  F  E  I  I  S  W  N  *  F  R  C  T  *  A  C  P  *   </second_frame>
            <third_frame>   F  T  L  H  S  P  E  S  L  T  A  A  I  S  F  S  G  G  F  K  :  A  G  V  S  V  K  H  K  F  Y  Q  V  V  E  V  E  I  I  R  V  L  L  H  *  H  N  T  R  M  K  F  *  S  S  *  H  H  L  Q  F  I  A  W  K  V  I  S  *  A  *  S  S  *  H  G  *  D  P  S  K  P  V  Q  L  F  V  K  L  *  G  L  C  S  L  V  R  F  N  L  I  L  F  P  E  I  L  M  S  S  P  *  G  T  N  I  L  L  P  M  I  H  M  A  R  D  P  H  H  Q  T  R  *  F  S  L  L  N  V  L  L  L  *  P  Q  K  N  V  D  K  L  V  L  Y  S  G  R  Y  *  G  T  L  L  *  N  Q  F  Q  *  K  A  W  I  W  V  Q  W  E  E  Q  V  V  D  R  Q  R  L  R  R  R  R  L  R  K  Q  H  L  T  *  S  *  R  N  L  M  Q  L  R  K  S  R  *  S  K  R  L  D  P  S  R  V  *  V  *  R  K  P  R  T  L  S  K  R  F  L  L  Y  L  S  K  E  *  P  K  R  K  L  M  K  *  *  K  R  S  K  L  L  E  E  S  P  L  W  S  N  N  N  L  C  W  I  *  Q  V  P  S  S  C  I  S  S  F  F  T  T  E  H  A  K  I  N  I  I  S  L  C  W  I  *  F  L  G  L  G  R  S  R  F  V  *  *  V  S  C  F  L  Q  L  *  I  G  M  L  I  T  I  F  C  I  *  S  C  C  *  T  V  K  N  S  K  *  S  R  G  I  N  L  G  A  L  E  L  A  P  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69130" stop="69819"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGNYPSSFALAQHAYEILIKLTSFAIHCLESDILSMKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNVKPIRYKYPAAYDPYGPRPPPSDKIVQLAERIAALAPEERRQIGPLLREILRHPTLKPISVEGMDLGAMGGAGGGPAKAEEKKVEKTAFDVKLEKFDAAAKIKVIKEVRSFTSLGLKEAKDLVEKVPAILKQGVTKEEANEIIEKIKAVGGVAVME*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="68126" e_stop="68178"/>
            <exon e_start="69023" e_stop="70091"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.773" acc_prob="0.107" e_score="0.962"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="68126" e_stop="68178" e_length="53"/>
          </exon>
          <intron i_serial="1" don_prob="0.773" acc_prob="0.107">
            <gDNA_intron_boundary i_start="68179" i_stop="69022" i_length="844"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="69023" e_stop="70091" e_length="1069"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68126" stop="68178"/>
              <exon start="69023" stop="69651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69113" stop="69621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262560" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69127" stop="69526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260421" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69169" stop="69563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69262" stop="69720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472552" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69333" stop="69908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69333" stop="69738"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69442" stop="70052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353860" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69604" stop="70091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292488" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAA : ATAGGGTGATTGGAGTGTATTTTTCGTTTCTATTGTATGAACTGAATGTCGAATTTTCTTTTCAAGGCAGGAGTGAGTGTAAAGCACAAGTTTTACCAAGTGGTTGAAGTGGAAATTATCCGAGTTCTTTTGCATTAGCACAACACGCGTATGAAATTCTGATCAAGCTAACATCATTTGCAATTCATTGCTTGGAAAGTGATATCTTAAGCATGAAGCTCATAGCACGGTTAAGACCCATCCAAACCTGTACAGCTCTTCGTGAAATTATAGGGCCTCTGCAGTCTCGTTCGTTTCAACCTGATTTTGTTCCCAGAGATCCTAATGTCAAGCCCATAAGGTACAAATATCCTGCTGCCTATGATCCATATGGCCCGAGACCCCCACCATCAGACAAGATAGTTCAGCTTGCTGAACGTATTGCTGCTTTAGCCCCAGAAGAACGTAGACAAATTGGTCCTTTACTCAGGGAGATACTAAGGCACCCTACTTTGAAACCAATTTCAGTAGAAGGCATGGATTTGGGTGCAATGGGAGGAGCAGGTGGTGGACCGGCAAAGGCTGAGGAGAAGAAGGTTGAGAAAACAGCATTTGACGTGAAGTTAGAGAAATTTGATGCAGCTGCGAAAATCAAGGTGATCAAAGAGGTTAGATCCTTCACGAGTCTAGGTCTGAAGGAAGCCAAGGACCTTGTCGAAAAGGTTCCTGCTATACTTAAGCAAGGAGTAACCAAAGAGGAAGCTAATGAAATAATAGAAAAGATCAAAGCTGTTGGAGGAGTCGCCGTTATGGAGTAACAACAATCTCTGTTGGATTTAGCAGGTTCCCTCATCCTGCATTTCTTCTTTTTTCACAACGGAACATGCCAAAATTAACATAATTTCTCTTTGTTGGATTTAGTTTCTTGGGTTAGGACGATCACGTTTTGTTTAATAGGTTTCGTGCTTTTTACAGCTTTGAATAGGCATGTTGATTACAATATTTTGTATCTGATCTTGCTGCTAGACTGTTAAGAATTCGAAATAATCTCGTGGAATTAATTTAGGTGCACTTGAGCTTGCCCCTAACA</gDNA_template>
            <first_frame> C  T  R  R  N  L  S  R  R  R  S  L  S  P  E  D  L  K :   *  G  D  W  S  V  F  F  V  S  I  V  *  T  E  C  R  I  F  F  S  R  Q  E  *  V  *  S  T  S  F  T  K  W  L  K  W  K  L  S  E  F  F  C  I  S  T  T  R  V  *  N  S  D  Q  A  N  I  I  C  N  S  L  L  G  K  *  Y  L  K  H  E  A  H  S  T  V  K  T  H  P  N  L  Y  S  S  S  *  N  Y  R  A  S  A  V  S  F  V  S  T  *  F  C  S  Q  R  S  *  C  Q  A  H  K  V  Q  I  S  C  C  L  *  S  I  W  P  E  T  P  T  I  R  Q  D  S  S  A  C  *  T  Y  C  C  F  S  P  R  R  T  *  T  N  W  S  F  T  Q  G  D  T  K  A  P  Y  F  E  T  N  F  S  R  R  H  G  F  G  C  N  G  R  S  R  W  W  T  G  K  G  *  G  E  E  G  *  E  N  S  I  *  R  E  V  R  E  I  *  C  S  C  E  N  Q  G  D  Q  R  G  *  I  L  H  E  S  R  S  E  G  S  Q  G  P  C  R  K  G  S  C  Y  T  *  A  R  S  N  Q  R  G  S  *  *  N  N  R  K  D  Q  S  C  W  R  S  R  R  Y  G  V  T  T  I  S  V  G  F  S  R  F  P  H  P  A  F  L  L  F  S  Q  R  N  M  P  K  L  T  *  F  L  F  V  G  F  S  F  L  G  *  D  D  H  V  L  F  N  R  F  R  A  F  Y  S  F  E  *  A  C  *  L  Q  Y  F  V  S  D  L  A  A  R  L  L  R  I  R  N  N  L  V  E  L  I  *  V  H  L  S  L  P  L  T </first_frame>
            <second_frame>  A  L  A  G  I  S  H  G  G  D  L  F  L  R  R  I  *   : N  R  V  I  G  V  Y  F  S  F  L  L  Y  E  L  N  V  E  F  S  F  Q  G  R  S  E  C  K  A  Q  V  L  P  S  G  *  S  G  N  Y  P  S  S  F  A  L  A  Q  H  A  Y  E  I  L  I  K  L  T  S  F  A  I  H  C  L  E  S  D  I  L  S  M  K  L  I  A  R  L  R  P  I  Q  T  C  T  A  L  R  E  I  I  G  P  L  Q  S  R  S  F  Q  P  D  F  V  P  R  D  P  N  V  K  P  I  R  Y  K  Y  P  A  A  Y  D  P  Y  G  P  R  P  P  P  S  D  K  I  V  Q  L  A  E  R  I  A  A  L  A  P  E  E  R  R  Q  I  G  P  L  L  R  E  I  L  R  H  P  T  L  K  P  I  S  V  E  G  M  D  L  G  A  M  G  G  A  G  G  G  P  A  K  A  E  E  K  K  V  E  K  T  A  F  D  V  K  L  E  K  F  D  A  A  A  K  I  K  V  I  K  E  V  R  S  F  T  S  L  G  L  K  E  A  K  D  L  V  E  K  V  P  A  I  L  K  Q  G  V  T  K  E  E  A  N  E  I  I  E  K  I  K  A  V  G  G  V  A  V  M  E  *  Q  Q  S  L  L  D  L  A  G  S  L  I  L  H  F  F  F  F  H  N  G  T  C  Q  N  *  H  N  F  S  L  L  D  L  V  S  W  V  R  T  I  T  F  C  L  I  G  F  V  L  F  T  A  L  N  R  H  V  D  Y  N  I  L  Y  L  I  L  L  L  D  C  *  E  F  E  I  I  S  W  N  *  F  R  C  T  *  A  C  P  *   </second_frame>
            <third_frame>   H  S  P  E  S  L  T  A  A  I  S  F  S  G  G  F  K  :  I  G  *  L  E  C  I  F  R  F  Y  C  M  N  *  M  S  N  F  L  F  K  A  G  V  S  V  K  H  K  F  Y  Q  V  V  E  V  E  I  I  R  V  L  L  H  *  H  N  T  R  M  K  F  *  S  S  *  H  H  L  Q  F  I  A  W  K  V  I  S  *  A  *  S  S  *  H  G  *  D  P  S  K  P  V  Q  L  F  V  K  L  *  G  L  C  S  L  V  R  F  N  L  I  L  F  P  E  I  L  M  S  S  P  *  G  T  N  I  L  L  P  M  I  H  M  A  R  D  P  H  H  Q  T  R  *  F  S  L  L  N  V  L  L  L  *  P  Q  K  N  V  D  K  L  V  L  Y  S  G  R  Y  *  G  T  L  L  *  N  Q  F  Q  *  K  A  W  I  W  V  Q  W  E  E  Q  V  V  D  R  Q  R  L  R  R  R  R  L  R  K  Q  H  L  T  *  S  *  R  N  L  M  Q  L  R  K  S  R  *  S  K  R  L  D  P  S  R  V  *  V  *  R  K  P  R  T  L  S  K  R  F  L  L  Y  L  S  K  E  *  P  K  R  K  L  M  K  *  *  K  R  S  K  L  L  E  E  S  P  L  W  S  N  N  N  L  C  W  I  *  Q  V  P  S  S  C  I  S  S  F  F  T  T  E  H  A  K  I  N  I  I  S  L  C  W  I  *  F  L  G  L  G  R  S  R  F  V  *  *  V  S  C  F  L  Q  L  *  I  G  M  L  I  T  I  F  C  I  *  S  C  C  *  T  V  K  N  S  K  *  S  R  G  I  N  L  G  A  L  E  L  A  P  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69130" stop="69819"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGNYPSSFALAQHAYEILIKLTSFAIHCLESDILSMKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNVKPIRYKYPAAYDPYGPRPPPSDKIVQLAERIAALAPEERRQIGPLLREILRHPTLKPISVEGMDLGAMGGAGGGPAKAEEKKVEKTAFDVKLEKFDAAAKIKVIKEVRSFTSLGLKEAKDLVEKVPAILKQGVTKEEANEIIEKIKAVGGVAVME*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="68107" e_stop="68750"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="68107" e_stop="68750" e_length="644"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68107" stop="68750"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68107" stop="68612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246120" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTTCGGCCAGTTCACACTGCACTCGCCGGAATCTCTCACGGCGGCGATCTCTTTCTCCGGAGGATTTAAAGTCCTAAGTCTCTTCATTTATATCTTCAATTCACGAATTCCCTTTGGTTAGTGTTCATGAGCCATAAACGCTACTTTTTATTTTTTGATTTGGTGAAATGTGACTTTTGAATTGGATCTATGTACATCTTGAAAATCCTCAGATTCAATTTTTCTTAGCTCTGTGTGAATATTTACGTCGCTGTGCTTCGGCTACCTGTAGAAATGATAATTTAGAGTCAAAGGAAAATATCATAAGTTTGGCCTCTTCGACTGTTAGAGCGATTTGTCTGCTGTGCTTTTGGTTCTTCTTTTAATCTTTGCTTCTAGCTGGAAATTTTTTCTTTTTTTCTGCTTCTTCGATATGTTTTGGAAACTGAATTTGGGGTTGTTTTTTTGGGTCTAAAGCCACTGTTGAGCTGCCCTTGTGTGTTAGCAGTTAGTACATTATCTGGAATTGATTGTTTTCGTCTTTGCAGTCTGCTGCAATAGCATCAAAGGATACTTCTGTGCTTCCTTTGATAGATGAACAACTAGTTTTCCTCGTAAAAATGATGTAAAGGTTTAATTTGAATTCAGTTTCATTCGTTCATT</gDNA_template>
            <first_frame> F  F  G  Q  F  T  L  H  S  P  E  S  L  T  A  A  I  S  F  S  G  G  F  K  V  L  S  L  F  I  Y  I  F  N  S  R  I  P  F  G  *  C  S  *  A  I  N  A  T  F  Y  F  L  I  W  *  N  V  T  F  E  L  D  L  C  T  S  *  K  S  S  D  S  I  F  L  S  S  V  *  I  F  T  S  L  C  F  G  Y  L  *  K  *  *  F  R  V  K  G  K  Y  H  K  F  G  L  F  D  C  *  S  D  L  S  A  V  L  L  V  L  L  L  I  F  A  S  S  W  K  F  F  L  F  F  C  F  F  D  M  F  W  K  L  N  L  G  L  F  F  W  V  *  S  H  C  *  A  A  L  V  C  *  Q  L  V  H  Y  L  E  L  I  V  F  V  F  A  V  C  C  N  S  I  K  G  Y  F  C  A  S  F  D  R  *  T  T  S  F  P  R  K  N  D  V  K  V  *  F  E  F  S  F  I  R  S   </first_frame>
            <second_frame>  S  S  A  S  S  H  C  T  R  R  N  L  S  R  R  R  S  L  S  P  E  D  L  K  S  *  V  S  S  F  I  S  S  I  H  E  F  P  L  V  S  V  H  E  P  *  T  L  L  F  I  F  *  F  G  E  M  *  L  L  N  W  I  Y  V  H  L  E  N  P  Q  I  Q  F  F  L  A  L  C  E  Y  L  R  R  C  A  S  A  T  C  R  N  D  N  L  E  S  K  E  N  I  I  S  L  A  S  S  T  V  R  A  I  C  L  L  C  F  W  F  F  F  *  S  L  L  L  A  G  N  F  F  F  F  S  A  S  S  I  C  F  G  N  *  I  W  G  C  F  F  G  S  K  A  T  V  E  L  P  L  C  V  S  S  *  Y  I  I  W  N  *  L  F  S  S  L  Q  S  A  A  I  A  S  K  D  T  S  V  L  P  L  I  D  E  Q  L  V  F  L  V  K  M  M  *  R  F  N  L  N  S  V  S  F  V  H  </second_frame>
            <third_frame>   L  R  P  V  H  T  A  L  A  G  I  S  H  G  G  D  L  F  L  R  R  I  *  S  P  K  S  L  H  L  Y  L  Q  F  T  N  S  L  W  L  V  F  M  S  H  K  R  Y  F  L  F  F  D  L  V  K  C  D  F  *  I  G  S  M  Y  I  L  K  I  L  R  F  N  F  S  *  L  C  V  N  I  Y  V  A  V  L  R  L  P  V  E  M  I  I  *  S  Q  R  K  I  S  *  V  W  P  L  R  L  L  E  R  F  V  C  C  A  F  G  S  S  F  N  L  C  F  *  L  E  I  F  S  F  F  L  L  L  R  Y  V  L  E  T  E  F  G  V  V  F  L  G  L  K  P  L  L  S  C  P  C  V  L  A  V  S  T  L  S  G  I  D  C  F  R  L  C  S  L  L  Q  *  H  Q  R  I  L  L  C  F  L  *  *  M  N  N  *  F  S  S  *  K  *  C  K  G  L  I  *  I  Q  F  H  S  F  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0168F14.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="70049" PGL_stop="69639"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70049" e_stop="69639"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="70049" e_stop="69639" e_length="411"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70049" stop="69639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369986" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTATTTCGAATTCTTAACAGTCTAGCAGCAAGATCAGATACAAAATATTGTAATCAACATGCCTATTCAAAGCTGTAAAAAGCACGAAACCTATTAAACAAAACGTGATCGTCCTAACCCAAGAAACTAAATCCAACAAAGAGAAATTATGTTAATTTTGGCATGTTCCGTTGTGAAAAAAGAAGAAATGCAGGATGAGGGAACCTGCTAAATCCAACAGAGATTGTTGTTACTCCATAACGGCGACTCCTCCAACAGCTTTGATCTTTTCTATTATTTCATTAGCTTCCTCTTTGGTTACTCCTTGCTTAAGTATAGCAGGAACCTTTTCGACAAGGTCCTTGGCTTCCTTCAGACCTAGACTCGTGAAGGATCTAACCTCTTTGATCACCTTGATTTTCGCAGCTGCA</gDNA_template>
            <first_frame> I  I  S  N  S  *  Q  S  S  S  K  I  R  Y  K  I  L  *  S  T  C  L  F  K  A  V  K  S  T  K  P  I  K  Q  N  V  I  V  L  T  Q  E  T  K  S  N  K  E  K  L  C  *  F  W  H  V  P  L  *  K  K  K  K  C  R  M  R  E  P  A  K  S  N  R  D  C  C  Y  S  I  T  A  T  P  P  T  A  L  I  F  S  I  I  S  L  A  S  S  L  V  T  P  C  L  S  I  A  G  T  F  S  T  R  S  L  A  S  F  R  P  R  L  V  K  D  L  T  S  L  I  T  L  I  F  A  A  A </first_frame>
            <second_frame>  L  F  R  I  L  N  S  L  A  A  R  S  D  T  K  Y  C  N  Q  H  A  Y  S  K  L  *  K  A  R  N  L  L  N  K  T  *  S  S  *  P  K  K  L  N  P  T  K  R  N  Y  V  N  F  G  M  F  R  C  E  K  R  R  N  A  G  *  G  N  L  L  N  P  T  E  I  V  V  T  P  *  R  R  L  L  Q  Q  L  *  S  F  L  L  F  H  *  L  P  L  W  L  L  L  A  *  V  *  Q  E  P  F  R  Q  G  P  W  L  P  S  D  L  D  S  *  R  I  *  P  L  *  S  P  *  F  S  Q  L   </second_frame>
            <third_frame>   Y  F  E  F  L  T  V  *  Q  Q  D  Q  I  Q  N  I  V  I  N  M  P  I  Q  S  C  K  K  H  E  T  Y  *  T  K  R  D  R  P  N  P  R  N  *  I  Q  Q  R  E  I  M  L  I  L  A  C  S  V  V  K  K  E  E  M  Q  D  E  G  T  C  *  I  Q  Q  R  L  L  L  L  H  N  G  D  S  S  N  S  F  D  L  F  Y  Y  F  I  S  F  L  F  G  Y  S  L  L  K  Y  S  R  N  L  F  D  K  V  L  G  F  L  Q  T  *  T  R  E  G  S  N  L  F  D  H  L  D  F  R  S  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69872" stop="69639"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKKKCRMREPAKSNRDCCYSITATPPTALIFSIISLASSLVTPCLSIAGTFSTRSLASFRPRLVKDLTSLITLIFAAA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="70539" PGL_stop="70955"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70539" e_stop="70955"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="70539" e_stop="70955" e_length="417"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70539" stop="70955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243215" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTATTGTAGATGACCAAATTTTTTCTTCGCATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTATTTTTTGTTCTTTAAACTAAGGAATGTAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACTCCTAAATATTTTTTTTAAAAAAAATAGAACTAATAAATATAAATTTAAAACTAATCTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGCTATTTTGTAACGGCAGGGATATATGTGAGCCGTTTGTATAATGGTAAGGGTATATATGTGCCACTTTTATAACGAGGGTATATCAGCTCCAATGACAAAGTTGAGG</gDNA_template>
            <first_frame> L  L  *  M  T  K  F  F  L  R  I  R  N  *  I  T  I  H  T  K  K  I  V  Y  F  L  F  F  K  L  R  N  V  R  K  K  Q  N  K  N  K  K  L  K  *  L  *  *  K  K  S  K  N  N  L  C  M  K  K  I  K  I  Y  L  E  L  *  *  K  N  H  I  Y  S  *  I  F  F  L  K  K  I  E  L  I  N  I  N  L  K  L  I  F  *  L  P  L  N  E  G  Y  M  *  A  I  L  *  R  Q  G  Y  M  *  A  V  C  I  M  V  R  V  Y  M  C  H  F  Y  N  E  G  I  S  A  P  M  T  K  L  R </first_frame>
            <second_frame>  Y  C  R  *  P  N  F  F  F  A  Y  E  I  K  L  Q  Y  T  Q  K  K  *  F  I  F  C  S  L  N  *  G  M  *  E  K  N  K  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  Y  V  *  K  K  L  K  Y  T  L  N  F  D  R  R  I  I  Y  T  P  K  Y  F  F  *  K  K  *  N  *  *  I  *  I  *  N  *  S  F  N  F  R  *  M  K  G  I  C  E  L  F  C  N  G  R  D  I  C  E  P  F  V  *  W  *  G  Y  I  C  A  T  F  I  T  R  V  Y  Q  L  Q  *  Q  S  *   </second_frame>
            <third_frame>   I  V  D  D  Q  I  F  S  S  H  T  K  L  N  Y  N  T  H  K  K  N  S  L  F  F  V  L  *  T  K  E  C  K  K  K  T  K  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  K  *  F  M  Y  E  K  N  *  N  I  P  *  T  L  I  E  E  S  Y  I  L  L  N  I  F  F  K  K  N  R  T  N  K  Y  K  F  K  T  N  L  L  T  S  V  K  *  R  V  Y  V  S  Y  F  V  T  A  G  I  Y  V  S  R  L  Y  N  G  K  G  I  Y  V  P  L  L  *  R  G  Y  I  S  S  N  D  K  V  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0168F14.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="73973" PGL_stop="73422"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73973" e_stop="73422"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="73973" e_stop="73422" e_length="552"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73973" stop="73422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73748" stop="73433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235645" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCGAGTACTGGAATTGATCTAACTGTCACAGTACTTACAAGTGGGTTCTGGCCTAGCTATAAATCTTGTGATTTGAGTCTACCTGTCGAGATGGCTAAGTGTGTACAAGTCTTCAACGAATTCTATCAGACAACAACGAAACACAGGAAACTGACATGGATTTATTCATTGGGTACGTGTAACGTCATTGGGAAGTTTGATTCAAAAACCATTGAATTGATTCTGGGAACCTATCAGGCTGCTGTTCTGTCATTGTTTAATTCGTCAGATAGATTGAGTTACTCGGAAATCAAAAGTCAGTTAAATTTAGCTGATGATGACTTGATCAGATTGCTTCAATCTCTTTCATGTGCTAAGTATAAAATTCTGATTAAAGATCCTAGCAATGCAACTGTTACATCATCTGATCATTTCGAGTTCAACTCCAAGTTCACTGACAGGATGAGACGGGTTAGGGTACCGTTACCTCTTGTGGATGAAAGGAAAAAGGTGGTGGAGGATGTAGGCAAAGATAGACGTTATGCAATCGATGCATGTATAGTACGTATTATG</gDNA_template>
            <first_frame> A  S  T  G  I  D  L  T  V  T  V  L  T  S  G  F  W  P  S  Y  K  S  C  D  L  S  L  P  V  E  M  A  K  C  V  Q  V  F  N  E  F  Y  Q  T  T  T  K  H  R  K  L  T  W  I  Y  S  L  G  T  C  N  V  I  G  K  F  D  S  K  T  I  E  L  I  L  G  T  Y  Q  A  A  V  L  S  L  F  N  S  S  D  R  L  S  Y  S  E  I  K  S  Q  L  N  L  A  D  D  D  L  I  R  L  L  Q  S  L  S  C  A  K  Y  K  I  L  I  K  D  P  S  N  A  T  V  T  S  S  D  H  F  E  F  N  S  K  F  T  D  R  M  R  R  V  R  V  P  L  P  L  V  D  E  R  K  K  V  V  E  D  V  G  K  D  R  R  Y  A  I  D  A  C  I  V  R  I  M </first_frame>
            <second_frame>  R  V  L  E  L  I  *  L  S  Q  Y  L  Q  V  G  S  G  L  A  I  N  L  V  I  *  V  Y  L  S  R  W  L  S  V  Y  K  S  S  T  N  S  I  R  Q  Q  R  N  T  G  N  *  H  G  F  I  H  W  V  R  V  T  S  L  G  S  L  I  Q  K  P  L  N  *  F  W  E  P  I  R  L  L  F  C  H  C  L  I  R  Q  I  D  *  V  T  R  K  S  K  V  S  *  I  *  L  M  M  T  *  S  D  C  F  N  L  F  H  V  L  S  I  K  F  *  L  K  I  L  A  M  Q  L  L  H  H  L  I  I  S  S  S  T  P  S  S  L  T  G  *  D  G  L  G  Y  R  Y  L  L  W  M  K  G  K  R  W  W  R  M  *  A  K  I  D  V  M  Q  S  M  H  V  *  Y  V  L   </second_frame>
            <third_frame>   E  Y  W  N  *  S  N  C  H  S  T  Y  K  W  V  L  A  *  L  *  I  L  *  F  E  S  T  C  R  D  G  *  V  C  T  S  L  Q  R  I  L  S  D  N  N  E  T  Q  E  T  D  M  D  L  F  I  G  Y  V  *  R  H  W  E  V  *  F  K  N  H  *  I  D  S  G  N  L  S  G  C  C  S  V  I  V  *  F  V  R  *  I  E  L  L  G  N  Q  K  S  V  K  F  S  *  *  *  L  D  Q  I  A  S  I  S  F  M  C  *  V  *  N  S  D  *  R  S  *  Q  C  N  C  Y  I  I  *  S  F  R  V  Q  L  Q  V  H  *  Q  D  E  T  G  *  G  T  V  T  S  C  G  *  K  E  K  G  G  G  G  C  R  Q  R  *  T  L  C  N  R  C  M  Y  S  T  Y  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73973" stop="73422"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASTGIDLTVTVLTSGFWPSYKSCDLSLPVEMAKCVQVFNEFYQTTTKHRKLTWIYSLGTCNVIGKFDSKTIELILGTYQAAVLSLFNSSDRLSYSEIKSQLNLADDDLIRLLQSLSCAKYKILIKDPSNATVTSSDHFEFNSKFTDRMRRVRVPLPLVDERKKVVEDVGKDRRYAIDACIVRIM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="82434" PGL_stop="85946"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82434" e_stop="82589"/>
            <exon e_start="82704" e_stop="82811"/>
            <exon e_start="82960" e_stop="83118"/>
            <exon e_start="83191" e_stop="83274"/>
            <exon e_start="83361" e_stop="83566"/>
            <exon e_start="83769" e_stop="83870"/>
            <exon e_start="84596" e_stop="84705"/>
            <exon e_start="85089" e_stop="85240"/>
            <exon e_start="85534" e_stop="85946"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.488" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.969" e_score="0.976"/>
          <exon-intron don_prob="0.993" acc_prob="0.921" e_score="1.000"/>
          <exon-intron don_prob="0.861" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82434" e_stop="82589" e_length="156"/>
          </exon>
          <intron i_serial="1" don_prob="0.488" acc_prob="0.996">
            <gDNA_intron_boundary i_start="82590" i_stop="82703" i_length="114"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82704" e_stop="82811" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.983" acc_prob="0.991">
            <gDNA_intron_boundary i_start="82812" i_stop="82959" i_length="148"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="82960" e_stop="83118" e_length="159"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="83119" i_stop="83190" i_length="72"/>
          </intron>
          <exon e_serial="4" e_score="0.976">
            <gDNA_exon_boundary e_start="83191" e_stop="83274" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.969">
            <gDNA_intron_boundary i_start="83275" i_stop="83360" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="83361" e_stop="83566" e_length="206"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.921">
            <gDNA_intron_boundary i_start="83567" i_stop="83768" i_length="202"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="83769" e_stop="83870" e_length="102"/>
          </exon>
          <intron i_serial="6" don_prob="0.861" acc_prob="0.999">
            <gDNA_intron_boundary i_start="83871" i_stop="84595" i_length="725"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="84596" e_stop="84705" e_length="110"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="84706" i_stop="85088" i_length="383"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="85089" e_stop="85240" e_length="152"/>
          </exon>
          <intron i_serial="8" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="85241" i_stop="85533" i_length="293"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="85534" e_stop="85946" e_length="413"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82434" stop="82589"/>
              <exon start="82704" stop="82811"/>
              <exon start="82960" stop="83118"/>
              <exon start="83191" stop="83274"/>
              <exon start="83361" stop="83543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315321" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83473" stop="83566"/>
              <exon start="83769" stop="83870"/>
              <exon start="84596" stop="84705"/>
              <exon start="85089" stop="85240"/>
              <exon start="85534" stop="85724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83473" stop="83566"/>
              <exon start="83769" stop="83870"/>
              <exon start="84596" stop="84705"/>
              <exon start="85089" stop="85240"/>
              <exon start="85534" stop="85723"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85543" stop="85946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354281" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAGACTTGACGAATAAAATTAATTCTTCAAAGGCCTTGTACATATCTCACTTTGAGGCTATGCAAAATGTAGTGAAGCTGCATAAAGCCACTTCTAATGCTGCTCTGGAGGAAATTTCGACTTTGGCTTCTTCTAATTCAATTTCCACTAAAGAA : TTTTTAGATGCAGAGTCTGTTGAAACAAATTTAATTTTTGATGAACTTCAGAACACTCTGTCAACCCACCAAGGAGAAATGGCAAATTTTGCTAGAGAGCTTCGTCAG : AGATTTAATGACAGTACAGAGCATTTGACAAATATCTCTGAGATCATACAAGGATTTTTTGACAAACTTTTAGAAGAATCAAAAAGACTTGAAAGACATTCAACAACAGCTGATGAGATTCAAACGAAGTCTATTGCTGAATTTGAGAAGGCATATGAG : GAGCAATCAAGATCAGATGCAGAAAAGCTTATTGCTGAGGTGACTTCCTTGGTCTCGAATCACATGCGTCGCCAAAAAGAACTG : GTTGGTGCAAGGCTTGGTGATCTTAGAGAAACTGTTTCTGGAAATAAGACATTCTTGGATGGGCATGTATCCTCTATGGAAGGTATTACAACAGATACAAAAAGAAAATGGCAGGACTTTTATACGCAAGCAGAAGGTGAGACCAAAGAAAATGCTGATTTCTCAGCTGCTAAACATTGCCGAATGGAGTTACTCATGCAGAAGTG : TGTAAGCACAAGTGAAACAACTGTGAAACGGTGGCAAAGTACTCATGAATTGGCAAAAGACATGTGCAATCAACATGTTTCAACAATGCATTCAGTTGTCAG : GAACCTATGCGATAGCAATGAGCAACATGTTATTGAATTCGATTCCACAAGGGAAGCTGCTGAAGAAGCTGTGAAAAGGAATAGTGAAGATATCATTAAATCTATTGACG : GCTTGTCAGGGGAAGAGAGAGGATCTATATCTGGCATTCTGGATACTGCCAGTGCACACTCGGAGACCCTAGATGAACTTAAGAAAGATCATTGCACACAGTCTACCTCCATTGAACAGAAGGCCATTGAAACATTTCAGCAGAAGTTTATG : GATTATGAGCCAACTGGAACAACACCAATTAGGTCTGAACCAGATGTACCAAGCAAGGGAACAATTGAGTCGTTGCGAGCCATGCCAATGGAGACTCTACTAGAGGAATTTCGAGAGAACAATTCATTGGAGTCCTTCCAAGTAAAGGAACTAAAGCCATCACTTATACCACGATCTCCTCTCTCACTGATTAACAATTAGCAGATTGGTCTCATCGTTCCCTCGTGCATATGATCACTTAATCTGTATCGGTATTTTCCTTGTATACTGAGTGAATACTGCAAACTGCAGTATATATTGTAGGTTGATTGGCACAGTCTTAAACAATAAATCCCACCTTGGGATTTAGAAAAATGGCTGTAAATGAGTAACTCTTGGTACATTTATTTAGTAAAAGATGGTGCTCTCTATGT</gDNA_template>
            <first_frame> L  D  L  T  N  K  I  N  S  S  K  A  L  Y  I  S  H  F  E  A  M  Q  N  V  V  K  L  H  K  A  T  S  N  A  A  L  E  E  I  S  T  L  A  S  S  N  S  I  S  T  K  E  :  F  L  D  A  E  S  V  E  T  N  L  I  F  D  E  L  Q  N  T  L  S  T  H  Q  G  E  M  A  N  F  A  R  E  L  R  Q  :  R  F  N  D  S  T  E  H  L  T  N  I  S  E  I  I  Q  G  F  F  D  K  L  L  E  E  S  K  R  L  E  R  H  S  T  T  A  D  E  I  Q  T  K  S  I  A  E  F  E  K  A  Y  E  :  E  Q  S  R  S  D  A  E  K  L  I  A  E  V  T  S  L  V  S  N  H  M  R  R  Q  K  E  L  :  V  G  A  R  L  G  D  L  R  E  T  V  S  G  N  K  T  F  L  D  G  H  V  S  S  M  E  G  I  T  T  D  T  K  R  K  W  Q  D  F  Y  T  Q  A  E  G  E  T  K  E  N  A  D  F  S  A  A  K  H  C  R  M  E  L  L  M  Q  K  C :   V  S  T  S  E  T  T  V  K  R  W  Q  S  T  H  E  L  A  K  D  M  C  N  Q  H  V  S  T  M  H  S  V  V  R :   N  L  C  D  S  N  E  Q  H  V  I  E  F  D  S  T  R  E  A  A  E  E  A  V  K  R  N  S  E  D  I  I  K  S  I  D   : G  L  S  G  E  E  R  G  S  I  S  G  I  L  D  T  A  S  A  H  S  E  T  L  D  E  L  K  K  D  H  C  T  Q  S  T  S  I  E  Q  K  A  I  E  T  F  Q  Q  K  F  M  :  D  Y  E  P  T  G  T  T  P  I  R  S  E  P  D  V  P  S  K  G  T  I  E  S  L  R  A  M  P  M  E  T  L  L  E  E  F  R  E  N  N  S  L  E  S  F  Q  V  K  E  L  K  P  S  L  I  P  R  S  P  L  S  L  I  N  N  *  Q  I  G  L  I  V  P  S  C  I  *  S  L  N  L  Y  R  Y  F  P  C  I  L  S  E  Y  C  K  L  Q  Y  I  L  *  V  D  W  H  S  L  K  Q  *  I  P  P  W  D  L  E  K  W  L  *  M  S  N  S  W  Y  I  Y  L  V  K  D  G  A  L  Y   </first_frame>
            <second_frame>  *  T  *  R  I  K  L  I  L  Q  R  P  C  T  Y  L  T  L  R  L  C  K  M  *  *  S  C  I  K  P  L  L  M  L  L  W  R  K  F  R  L  W  L  L  L  I  Q  F  P  L  K  N :   F  *  M  Q  S  L  L  K  Q  I  *  F  L  M  N  F  R  T  L  C  Q  P  T  K  E  K  W  Q  I  L  L  E  S  F  V  R :   D  L  M  T  V  Q  S  I  *  Q  I  S  L  R  S  Y  K  D  F  L  T  N  F  *  K  N  Q  K  D  L  K  D  I  Q  Q  Q  L  M  R  F  K  R  S  L  L  L  N  L  R  R  H  M  R :   S  N  Q  D  Q  M  Q  K  S  L  L  L  R  *  L  P  W  S  R  I  T  C  V  A  K  K  N  W :   L  V  Q  G  L  V  I  L  E  K  L  F  L  E  I  R  H  S  W  M  G  M  Y  P  L  W  K  V  L  Q  Q  I  Q  K  E  N  G  R  T  F  I  R  K  Q  K  V  R  P  K  K  M  L  I  S  Q  L  L  N  I  A  E  W  S  Y  S  C  R  S   : V  *  A  Q  V  K  Q  L  *  N  G  G  K  V  L  M  N  W  Q  K  T  C  A  I  N  M  F  Q  Q  C  I  Q  L  S   : G  T  Y  A  I  A  M  S  N  M  L  L  N  S  I  P  Q  G  K  L  L  K  K  L  *  K  G  I  V  K  I  S  L  N  L  L  T  :  A  C  Q  G  K  R  E  D  L  Y  L  A  F  W  I  L  P  V  H  T  R  R  P  *  M  N  L  R  K  I  I  A  H  S  L  P  P  L  N  R  R  P  L  K  H  F  S  R  S  L  W :   I  M  S  Q  L  E  Q  H  Q  L  G  L  N  Q  M  Y  Q  A  R  E  Q  L  S  R  C  E  P  C  Q  W  R  L  Y  *  R  N  F  E  R  T  I  H  W  S  P  S  K  *  R  N  *  S  H  H  L  Y  H  D  L  L  S  H  *  L  T  I  S  R  L  V  S  S  F  P  R  A  Y  D  H  L  I  C  I  G  I  F  L  V  Y  *  V  N  T  A  N  C  S  I  Y  C  R  L  I  G  T  V  L  N  N  K  S  H  L  G  I  *  K  N  G  C  K  *  V  T  L  G  T  F  I  *  *  K  M  V  L  S  M  </second_frame>
            <third_frame>   R  L  D  E  *  N  *  F  F  K  G  L  V  H  I  S  L  *  G  Y  A  K  C  S  E  A  A  *  S  H  F  *  C  C  S  G  G  N  F  D  F  G  F  F  *  F  N  F  H  *  R   : I  F  R  C  R  V  C  *  N  K  F  N  F  *  *  T  S  E  H  S  V  N  P  P  R  R  N  G  K  F  C  *  R  A  S  S   : E  I  *  *  Q  Y  R  A  F  D  K  Y  L  *  D  H  T  R  I  F  *  Q  T  F  R  R  I  K  K  T  *  K  T  F  N  N  S  *  *  D  S  N  E  V  Y  C  *  I  *  E  G  I  *   : G  A  I  K  I  R  C  R  K  A  Y  C  *  G  D  F  L  G  L  E  S  H  A  S  P  K  R  T   : G  W  C  K  A  W  *  S  *  R  N  C  F  W  K  *  D  I  L  G  W  A  C  I  L  Y  G  R  Y  Y  N  R  Y  K  K  K  M  A  G  L  L  Y  A  S  R  R  *  D  Q  R  K  C  *  F  L  S  C  *  T  L  P  N  G  V  T  H  A  E  V  :  C  K  H  K  *  N  N  C  E  T  V  A  K  Y  S  *  I  G  K  R  H  V  Q  S  T  C  F  N  N  A  F  S  C  Q  :  E  P  M  R  *  Q  *  A  T  C  Y  *  I  R  F  H  K  G  S  C  *  R  S  C  E  K  E  *  *  R  Y  H  *  I  Y  *  R :   L  V  R  G  R  E  R  I  Y  I  W  H  S  G  Y  C  Q  C  T  L  G  D  P  R  *  T  *  E  R  S  L  H  T  V  Y  L  H  *  T  E  G  H  *  N  I  S  A  E  V  Y   : G  L  *  A  N  W  N  N  T  N  *  V  *  T  R  C  T  K  Q  G  N  N  *  V  V  A  S  H  A  N  G  D  S  T  R  G  I  S  R  E  Q  F  I  G  V  L  P  S  K  G  T  K  A  I  T  Y  T  T  I  S  S  L  T  D  *  Q  L  A  D  W  S  H  R  S  L  V  H  M  I  T  *  S  V  S  V  F  S  L  Y  T  E  *  I  L  Q  T  A  V  Y  I  V  G  *  L  A  Q  S  *  T  I  N  P  T  L  G  F  R  K  M  A  V  N  E  *  L  L  V  H  L  F  S  K  R  W  C  S  L  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82434" stop="82589"/>
                    <exon start="82704" stop="82811"/>
                    <exon start="82960" stop="83118"/>
                    <exon start="83191" stop="83274"/>
                    <exon start="83361" stop="83566"/>
                    <exon start="83769" stop="83870"/>
                    <exon start="84596" stop="84705"/>
                    <exon start="85089" stop="85240"/>
                    <exon start="85534" stop="85734"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1275</number_coding_nucleotides>
                  <number_encoded_amino_acids>425</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDLTNKINSSKALYISHFEAMQNVVKLHKATSNAALEEISTLASSNSISTKEFLDAESVETNLIFDELQNTLSTHQGEMANFARELRQRFNDSTEHLTNISEIIQGFFDKLLEESKRLERHSTTADEIQTKSIAEFEKAYEEQSRSDAEKLIAEVTSLVSNHMRRQKELVGARLGDLRETVSGNKTFLDGHVSSMEGITTDTKRKWQDFYTQAEGETKENADFSAAKHCRMELLMQKCVSTSETTVKRWQSTHELAKDMCNQHVSTMHSVVRNLCDSNEQHVIEFDSTREAAEEAVKRNSEDIIKSIDGLSGEERGSISGILDTASAHSETLDELKKDHCTQSTSIEQKAIETFQQKFMDYEPTGTTPIRSEPDVPSKGTIESLRAMPMETLLEEFRENNSLESFQVKELKPSLIPRSPLSLINN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="92971" PGL_stop="96957"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92971" e_stop="93211"/>
            <exon e_start="94497" e_stop="94505"/>
            <exon e_start="94583" e_stop="95604"/>
            <exon e_start="95784" e_stop="96028"/>
            <exon e_start="96219" e_stop="96318"/>
            <exon e_start="96450" e_stop="96957"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.654" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.961" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92971" e_stop="93211" e_length="241"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.000">
            <gDNA_intron_boundary i_start="93212" i_stop="94496" i_length="1285"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="94497" e_stop="94505" e_length="9"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.654">
            <gDNA_intron_boundary i_start="94506" i_stop="94582" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="94583" e_stop="95604" e_length="1022"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="95605" i_stop="95783" i_length="179"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="95784" e_stop="96028" e_length="245"/>
          </exon>
          <intron i_serial="4" don_prob="0.977" acc_prob="0.961">
            <gDNA_intron_boundary i_start="96029" i_stop="96218" i_length="190"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="96219" e_stop="96318" e_length="100"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.986">
            <gDNA_intron_boundary i_start="96319" i_stop="96449" i_length="131"/>
          </intron>
          <exon e_serial="6" e_score="0.976">
            <gDNA_exon_boundary e_start="96450" e_stop="96957" e_length="508"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92971" stop="93211"/>
              <exon start="94497" stop="94505"/>
              <exon start="94583" stop="95604"/>
              <exon start="95784" stop="96028"/>
              <exon start="96219" stop="96318"/>
              <exon start="96450" stop="96834"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744748" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94605" stop="95329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745216" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94907" stop="95377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240648" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94907" stop="95318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94932" stop="95307"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95071" stop="95604"/>
              <exon start="95784" stop="95880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95202" stop="95604"/>
              <exon start="95784" stop="95945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235797" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95441" stop="95604"/>
              <exon start="95784" stop="96028"/>
              <exon start="96219" stop="96318"/>
              <exon start="96450" stop="96598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367950" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95441" stop="95604"/>
              <exon start="95784" stop="96028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95456" stop="95604"/>
              <exon start="95784" stop="96028"/>
              <exon start="96219" stop="96318"/>
              <exon start="96450" stop="96611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232957" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95456" stop="95604"/>
              <exon start="95784" stop="96028"/>
              <exon start="96219" stop="96318"/>
              <exon start="96450" stop="96546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95456" stop="95604"/>
              <exon start="95784" stop="96028"/>
              <exon start="96219" stop="96276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95516" stop="95604"/>
              <exon start="95784" stop="96028"/>
              <exon start="96219" stop="96318"/>
              <exon start="96450" stop="96563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95517" stop="95604"/>
              <exon start="95784" stop="96028"/>
              <exon start="96219" stop="96318"/>
              <exon start="96450" stop="96557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95852" stop="96028"/>
              <exon start="96219" stop="96318"/>
              <exon start="96450" stop="96735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231264" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95883" stop="96028"/>
              <exon start="96219" stop="96318"/>
              <exon start="96450" stop="96661"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553013" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96243" stop="96318"/>
              <exon start="96450" stop="96957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367949" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTATTCTTCAATATCTTTCTCCAAAATCACAAAAAAAAAAAATGGAATTATTTATGAAAAACTCTTCTCTTTGGGGTTTAAAATTTTATTTATTTTGCTTATTTATAATTTTATCAAACATTAATAGGGCATTTGCTTCTCATAATATTTTTTTGGACTTGCAATCTTCAAGTGCTATTAGTGTCAAGAATGTTCATAGAACTCGTTTTCATTTTCAACCTCCTAAACATTGGATTAATG : ACCCTAATG : CACCAATGTATTATAATGGAGTGTATCATTTATTCTATCAATACAATCCAAAAGGATCAGTATGGGGCAATATTATTTGGGCTCATTCAGTCTCAAAAGACTTGATAAATTGGATCCATTTAGAACCTGCAATTTATCCATCCAAAAAATTTGACAAGTATGGTACTTGGTCTGGATCATCAACTATTTTACCTAATAACAAACCTGTTATCATATACACCGGAGTAGTAGATTCGTATAATAATCAAGTCCAGAACTACGCCATCCCGGCTAACCTATCTGATCCATTTCTTCGTAAATGGATCAAACCTAACAACAACCCGTTGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGGGTTATTTGGGGTTGGTCAAATGAATCCGATGTATTACCTGACGATGAAATTAAGAAAGGATGGGCTGGAATTCAAGGTATTCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAG : GCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAG : ATCTTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTG : ATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGATGCATGTAAGATGAACTAAATATTTTCAAAAAAATTGGAATTATGTCTACAATTATATATGTCTAAAGAGACAAAAATTGTGTTAAATTTAACAGTAGATGATGTTCACAAAAATCCTCTATAATTGTCTCTAATTTATTTTGGTGAATTTAGAAGGCAAAGTGTGTGTATGGATTTTTCTAGTACCATATATATATATATTAAGTAAGAAATTTGTTAGCTTTCCTTTTTGTTTTGTAACATAATCAAATGTGTGGTCTTATGTAGAACTAATATTTGGTAATATTAGGCAAGTTGTTATGTGACTTATTTTATTCAAAAATATAATAAGAAGTTCAAAGAGAAGA</gDNA_template>
            <first_frame> I  I  L  Q  Y  L  S  P  K  S  Q  K  K  K  M  E  L  F  M  K  N  S  S  L  W  G  L  K  F  Y  L  F  C  L  F  I  I  L  S  N  I  N  R  A  F  A  S  H  N  I  F  L  D  L  Q  S  S  S  A  I  S  V  K  N  V  H  R  T  R  F  H  F  Q  P  P  K  H  W  I  N   : D  P  N   : A  P  M  Y  Y  N  G  V  Y  H  L  F  Y  Q  Y  N  P  K  G  S  V  W  G  N  I  I  W  A  H  S  V  S  K  D  L  I  N  W  I  H  L  E  P  A  I  Y  P  S  K  K  F  D  K  Y  G  T  W  S  G  S  S  T  I  L  P  N  N  K  P  V  I  I  Y  T  G  V  V  D  S  Y  N  N  Q  V  Q  N  Y  A  I  P  A  N  L  S  D  P  F  L  R  K  W  I  K  P  N  N  N  P  L  I  V  P  D  N  S  I  N  R  T  E  F  R  D  P  T  T  A  W  M  G  Q  D  G  L  W  R  I  L  I  A  S  M  R  K  H  R  G  M  A  L  L  Y  R  S  R  D  F  M  K  W  I  K  A  Q  H  P  L  H  S  S  T  N  T  G  N  W  E  C  P  D  F  F  P  V  L  F  N  S  T  N  G  L  D  V  S  Y  R  G  K  N  V  K  Y  V  L  K  N  S  L  D  V  A  R  F  D  Y  Y  T  I  G  M  Y  H  T  K  I  D  R  Y  I  P  N  N  N  S  I  D  G  W  K  G  L  R  I  D  Y  G  N  F  Y  A  S  K  T  F  Y  D  P  S  R  N  R  R  V  I  W  G  W  S  N  E  S  D  V  L  P  D  D  E  I  K  K  G  W  A  G  I  Q  G  I  P  R  Q  V  W  L  N  L  S  G  K  Q  L  L  Q  W  P  I  E  E  L  E  T  L  R  K  Q  K  V  Q  L  N  N  K  K  L  S  K  G  E  M  F  E  V  K  G  I  S  A  S  Q  :  A  D  V  E  V  L  F  S  F  S  S  L  N  E  A  E  Q  F  D  P  R  W  A  D  L  Y  A  Q  D  V  C  A  I  K  G  S  T  I  Q  G  G  L  G  P  F  G  L  V  T  L  A  S  K  N  L  E  E  Y  T  P  V  F  F  R  V  F  K  A  Q  K  S  Y  K  I  L  M  C  S  D  A  R  R :   S  S  M  R  Q  N  E  A  M  Y  K  P  S  F  A  G  Y  V  D  V  D  L  E  D  M  K  K  L  S  L  R  S  L  :  I  D  N  S  V  V  E  S  F  G  A  G  G  K  T  C  I  T  S  R  V  Y  P  T  L  A  I  Y  D  N  A  H  L  F  V  F  N  N  G  S  E  T  I  T  I  E  T  L  N  A  W  S  M  D  A  C  K  M  N  *  I  F  S  K  K  L  E  L  C  L  Q  L  Y  M  S  K  E  T  K  I  V  L  N  L  T  V  D  D  V  H  K  N  P  L  *  L  S  L  I  Y  F  G  E  F  R  R  Q  S  V  C  M  D  F  S  S  T  I  Y  I  Y  I  K  *  E  I  C  *  L  S  F  L  F  C  N  I  I  K  C  V  V  L  C  R  T  N  I  W  *  Y  *  A  S  C  Y  V  T  Y  F  I  Q  K  Y  N  K  K  F  K  E  K  </first_frame>
            <second_frame>  L  F  F  N  I  F  L  Q  N  H  K  K  K  K  W  N  Y  L  *  K  T  L  L  F  G  V  *  N  F  I  Y  F  A  Y  L  *  F  Y  Q  T  L  I  G  H  L  L  L  I  I  F  F  W  T  C  N  L  Q  V  L  L  V  S  R  M  F  I  E  L  V  F  I  F  N  L  L  N  I  G  L  M  :  T  L  M  :  H  Q  C  I  I  M  E  C  I  I  Y  S  I  N  T  I  Q  K  D  Q  Y  G  A  I  L  F  G  L  I  Q  S  Q  K  T  *  *  I  G  S  I  *  N  L  Q  F  I  H  P  K  N  L  T  S  M  V  L  G  L  D  H  Q  L  F  Y  L  I  T  N  L  L  S  Y  T  P  E  *  *  I  R  I  I  I  K  S  R  T  T  P  S  R  L  T  Y  L  I  H  F  F  V  N  G  S  N  L  T  T  T  R  *  S  S  L  I  T  V  S  I  E  L  S  F  A  I  Q  L  Q  L  G  W  A  K  M  G  F  G  G  F  *  *  Q  V  *  E  N  I  E  G  W  H  C  C  I  E  V  E  I  L  *  N  G  S  K  P  N  I  H  F  I  H  L  L  I  L  E  I  G  S  V  L  I  F  S  L  Y  Y  L  I  V  P  M  V  *  M  Y  R  I  A  E  K  M  L  N  M  S  S  R  I  V  L  M  L  L  G  L  I  I  T  L  L  A  C  I  T  P  K  *  I  G  I  F  R  I  T  I  Q  L  M  V  G  R  D  *  E  S  T  M  V  I  S  M  H  R  R  H  S  M  I  L  A  E  I  E  G  L  F  G  V  G  Q  M  N  P  M  Y  Y  L  T  M  K  L  R  K  D  G  L  E  F  K  V  F  R  D  K  Y  G  *  T  L  V  V  N  N  Y  F  N  G  L  L  K  N  *  K  P  *  G  S  K  R  S  N  *  T  T  R  S  *  A  R  E  K  C  L  K  L  K  G  S  Q  H  H  R :   L  M  L  K  C  C  S  H  F  Q  V  *  T  R  P  N  N  L  I  L  D  G  L  T  Y  M  P  K  T  F  V  P  L  R  V  R  L  S  K  V  G  L  D  H  L  G  L  *  H  *  L  L  K  T  *  K  N  T  H  L  F  S  S  E  C  S  R  L  K  K  V  I  R  F  S  C  A  Q  M  L  E   : D  L  P  *  D  K  M  K  Q  C  T  S  P  H  L  L  D  M  *  M  *  I  *  K  T  *  R  S  Y  L  L  G  V  * :   L  I  T  Q  *  W  K  V  S  V  L  V  A  K  H  A  *  H  Q  G  C  I  Q  L  *  R  F  M  I  M  H  I  Y  L  F  L  T  M  A  L  R  Q  S  Q  L  R  L  *  M  L  G  A  W  M  H  V  R  *  T  K  Y  F  Q  K  N  W  N  Y  V  Y  N  Y  I  C  L  K  R  Q  K  L  C  *  I  *  Q  *  M  M  F  T  K  I  L  Y  N  C  L  *  F  I  L  V  N  L  E  G  K  V  C  V  W  I  F  L  V  P  Y  I  Y  I  L  S  K  K  F  V  S  F  P  F  C  F  V  T  *  S  N  V  W  S  Y  V  E  L  I  F  G  N  I  R  Q  V  V  M  *  L  I  L  F  K  N  I  I  R  S  S  K  R  R </second_frame>
            <third_frame>   Y  S  S  I  S  F  S  K  I  T  K  K  K  N  G  I  I  Y  E  K  L  F  S  L  G  F  K  I  L  F  I  L  L  I  Y  N  F  I  K  H  *  *  G  I  C  F  S  *  Y  F  F  G  L  A  I  F  K  C  Y  *  C  Q  E  C  S  *  N  S  F  S  F  S  T  S  *  T  L  D  *  * :   P  *  C :   T  N  V  L  *  W  S  V  S  F  I  L  S  I  Q  S  K  R  I  S  M  G  Q  Y  Y  L  G  S  F  S  L  K  R  L  D  K  L  D  P  F  R  T  C  N  L  S  I  Q  K  I  *  Q  V  W  Y  L  V  W  I  I  N  Y  F  T  *  *  Q  T  C  Y  H  I  H  R  S  S  R  F  V  *  *  S  S  P  E  L  R  H  P  G  *  P  I  *  S  I  S  S  *  M  D  Q  T  *  Q  Q  P  V  D  R  P  *  *  Q  Y  Q  *  N  *  V  S  R  S  N  Y  S  L  D  G  P  R  W  A  L  E  D  F  N  S  K  Y  E  K  T  *  R  D  G  I  V  V  *  K  *  R  F  Y  E  M  D  Q  S  P  T  S  T  S  F  I  Y  *  Y  W  K  L  G  V  S  *  F  F  P  C  I  I  *  *  Y  Q  W  F  R  C  I  V  S  R  K  K  C  *  I  C  P  Q  E  *  S  *  C  C  *  V  *  L  L  H  Y  W  H  V  S  H  Q  N  R  *  V  Y  S  E  *  Q  F  N  *  W  L  E  G  I  E  N  R  L  W  *  F  L  C  I  E  D  I  L  *  S  *  Q  K  S  K  G  Y  L  G  L  V  K  *  I  R  C  I  T  *  R  *  N  *  E  R  M  G  W  N  S  R  Y  S  A  T  S  M  A  K  P  *  W  *  T  I  T  S  M  A  Y  *  R  I  R  N  P  K  E  A  K  G  P  I  E  Q  Q  E  V  E  Q  G  R  N  V  *  S  *  R  D  L  S  I  T   : G  *  C  *  S  A  V  L  I  F  K  F  E  R  G  R  T  I  *  S  *  M  G  *  P  I  C  P  R  R  L  C  H  *  G  F  D  Y  P  R  W  A  W  T  I  W  A  C  D  I  S  F  *  K  L  R  R  I  H  T  C  F  L  P  S  V  Q  G  S  K  K  L  *  D  S  H  V  L  R  C  *  K  :  I  F  H  E  T  K  *  S  N  V  Q  A  L  I  C  W  I  C  R  C  R  F  R  R  H  E  E  V  I  S  *  E  F   : D  *  *  L  S  S  G  K  F  R  C  W  W  Q  N  M  H  N  I  K  G  V  S  N  F  S  D  L  *  *  C  T  F  I  C  F  *  Q  W  L  *  D  N  H  N  *  D  S  E  C  L  E  H  G  C  M  *  D  E  L  N  I  F  K  K  I  G  I  M  S  T  I  I  Y  V  *  R  D  K  N  C  V  K  F  N  S  R  *  C  S  Q  K  S  S  I  I  V  S  N  L  F  W  *  I  *  K  A  K  C  V  Y  G  F  F  *  Y  H  I  Y  I  Y  *  V  R  N  L  L  A  F  L  F  V  L  *  H  N  Q  M  C  G  L  M  *  N  *  Y  L  V  I  L  G  K  L  L  C  D  L  F  Y  S  K  I  *  *  E  V  Q  R  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92971" stop="93211"/>
                    <exon start="94497" stop="94505"/>
                    <exon start="94583" stop="95604"/>
                    <exon start="95784" stop="96028"/>
                    <exon start="96219" stop="96318"/>
                    <exon start="96450" stop="96629"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1794</number_coding_nucleotides>
                  <number_encoded_amino_acids>598</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IILQYLSPKSQKKKMELFMKNSSLWGLKFYLFCLFIILSNINRAFASHNIFLDLQSSSAISVKNVHRTRFHFQPPKHWINDPNAPMYYNGVYHLFYQYNPKGSVWGNIIWAHSVSKDLINWIHLEPAIYPSKKFDKYGTWSGSSTILPNNKPVIIYTGVVDSYNNQVQNYAIPANLSDPFLRKWIKPNNNPLIVPDNSINRTEFRDPTTAWMGQDGLWRILIASMRKHRGMALLYRSRDFMKWIKAQHPLHSSTNTGNWECPDFFPVLFNSTNGLDVSYRGKNVKYVLKNSLDVARFDYYTIGMYHTKIDRYIPNNNSIDGWKGLRIDYGNFYASKTFYDPSRNRRVIWGWSNESDVLPDDEIKKGWAGIQGIPRQVWLNLSGKQLLQWPIEELETLRKQKVQLNNKKLSKGEMFEVKGISASQADVEVLFSFSSLNEAEQFDPRWADLYAQDVCAIKGSTIQGGLGPFGLVTLASKNLEEYTPVFFRVFKAQKSYKILMCSDARRSSMRQNEAMYKPSFAGYVDVDLEDMKKLSLRSLIDNSVVESFGAGGKTCITSRVYPTLAIYDNAHLFVFNNGSETITIETLNAWSMDACKMN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="+" PGL_start="98057" PGL_stop="101595"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98057" e_stop="98344"/>
            <exon e_start="98601" e_stop="98609"/>
            <exon e_start="98943" e_stop="99961"/>
            <exon e_start="100690" e_stop="100934"/>
            <exon e_start="101033" e_stop="101129"/>
            <exon e_start="101205" e_stop="101595"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.813" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.974" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="98057" e_stop="98344" e_length="288"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="98345" i_stop="98600" i_length="256"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="98601" e_stop="98609" e_length="9"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.813">
            <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="98943" e_stop="99961" e_length="1019"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="99962" i_stop="100689" i_length="728"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="100690" e_stop="100934" e_length="245"/>
          </exon>
          <intron i_serial="4" don_prob="0.981" acc_prob="0.951">
            <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="101033" e_stop="101129" e_length="97"/>
          </exon>
          <intron i_serial="5" don_prob="0.964" acc_prob="0.974">
            <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="101205" e_stop="101595" e_length="391"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98057" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546911" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98058" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334559" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98058" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331604" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98058" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98065" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99961"/>
              <exon start="100690" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98070" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332525" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98072" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98073" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98076" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334424" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98085" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334092" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98096" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98133" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330542" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98288" stop="98344"/>
              <exon start="98601" stop="98609"/>
              <exon start="98943" stop="99474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98965" stop="99697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99115" stop="99793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99143" stop="99617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99152" stop="99574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99482" stop="99961"/>
              <exon start="100690" stop="100865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99615" stop="99961"/>
              <exon start="100690" stop="100929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99705" stop="99961"/>
              <exon start="100690" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546910" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99739" stop="99961"/>
              <exon start="100690" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547396" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99814" stop="99961"/>
              <exon start="100690" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373643" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100703" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225360" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100737" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218044" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100760" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225721" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100793" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225386" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100800" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225547" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100880" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217968" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTATCCAAAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG : ATCCCAATG : CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAG : GCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAG : GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG : ATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGAATAAGGAGAAAGGAACTATGGTAAAAGGGGGAAATATGAGATTTTGATGGACATATAAGAGTTTGTTATTTTGATATTTCAACTCTATTTTTTTTGTTTATCAAATTAGATATCCCTCGAGTCAAAAAAAATGTATATAGATTTATCCTCTATTTTCAATTTATGACAATAATGCTATGTTTTTGCTTTCAAAA</gDNA_template>
            <first_frame> L  I  Q  K  K  K  N  *  K  K  L  F  R  L  N  I  T  I  C  Q  S  P  I  I  K  I  K  *  K  L  W  I  I  H  L  I  K  V  L  V  G  L  C  Q  L  S  *  F  A  F  L  *  F  Y  Y  P  I  M  L  F  L  L  L  I  K  F  L  F  T  C  N  L  K  M  L  *  M  F  I  L  F  I  E  L  V  I  I  F  S  P  K  N  I  G  S  M  :  I  P  M  :  H  Q  C  I  S  M  E  C  I  I  Y  S  T  S  T  T  Q  M  V  Q  Y  G  V  T  L  F  G  L  I  P  F  Q  K  T  *  S  I  G  S  I  *  N  L  Q  F  T  H  Q  S  H  L  I  N  S  V  P  G  L  D  Q  Q  P  S  Y  L  V  T  S  Q  S  S  C  T  P  E  S  *  M  P  T  K  P  K  S  K  T  T  Q  S  Q  L  T  Y  P  I  H  I  S  A  N  G  S  S  Q  T  T  T  H  *  L  *  P  M  K  V  S  T  R  P  S  F  V  T  Q  Q  Q  H  G  W  V  K  T  G  I  G  E  S  S  W  E  V  *  G  N  T  A  G  A  *  L  *  C  I  G  A  K  T  L  *  N  G  S  R  L  N  T  H  F  T  Q  L  T  A  L  E  T  G  N  A  L  I  F  T  Q  F  H  R  K  V  L  M  G  W  I  N  T  V  R  N  T  S  T  C  *  R  T  V  W  I  L  L  D  L  S  I  I  H  L  E  N  T  I  R  K  K  I  G  T  F  Q  I  Q  I  L  S  I  V  *  R  D  *  D  S  I  T  V  T  S  T  H  R  S  H  S  T  I  Q  A  K  I  E  G  L  S  G  V  G  L  M  N  Q  I  Y  S  Q  R  M  I  M  R  R  D  G  L  G  F  N  *  F  L  V  K  Y  G  L  I  Q  V  V  S  S  W  F  N  G  L  W  R  N  *  K  P  *  E  L  K  R  F  N  *  A  T  R  R  *  T  M  G  R  R  L  K  L  Q  E  S  H  Q  H  R :   L  M  L  K  *  H  S  H  L  Q  V  W  I  R  Q  S  H  L  I  L  N  G  M  I  C  M  H  K  M  F  V  D  S  R  V  Q  M  F  K  V  G  L  G  H  L  V  L  L  H  *  L  L  K  T  W  K  K  T  H  R  F  S  S  E  F  S  K  H  S  K  T  T  R  F  S  C  V  L  T  L  K   : G  Q  L  L  S  S  M  K  Q  C  T  K  L  H  L  L  D  L  L  M  L  I  W  L  T  R  N  C  H  S  E  A  * :   L  I  I  Q  L  *  K  L  L  V  L  V  E  R  H  V  *  H  R  G  F  I  Q  H  W  Q  L  T  T  R  H  I  Y  S  R  L  T  T  E  R  S  Q  S  Q  L  R  V  W  M  H  G  V  W  A  K  L  R  Y  N  I  E  E  K  K  K  N  K  E  K  G  T  M  V  K  G  G  N  M  R  F  *  W  T  Y  K  S  L  L  F  *  Y  F  N  S  I  F  F  V  Y  Q  I  R  Y  P  S  S  Q  K  K  C  I  *  I  Y  P  L  F  S  I  Y  D  N  N  A  M  F  L  L  S  K </first_frame>
            <second_frame>  L  S  K  K  K  K  I  K  K  N  Y  L  D  *  I  S  L  S  V  K  A  Q  S  L  K  *  N  K  N  Y  G  L  F  I  *  *  K  F  S  L  G  F  A  S  Y  L  S  L  L  F  C  N  F  I  I  Q  *  C  C  F  C  F  S  *  S  F  Y  S  L  A  I  S  K  C  C  K  C  S  Y  C  S  S  N  W  L  S  F  S  A  R  K  T  L  D  Q  * :   S  Q  C :   T  N  V  F  Q  W  S  V  S  S  I  L  P  V  Q  P  K  W  F  S  M  G  *  H  C  L  G  S  F  R  F  K  R  L  D  Q  L  D  Q  F  R  T  C  N  L  P  I  K  A  I  *  S  I  R  Y  L  V  W  I  S  N  H  P  T  W  *  Q  A  S  H  L  V  H  R  N  H  R  C  Q  P  N  P  S  P  K  L  R  N  P  S  *  L  I  R  S  I  S  P  R  M  D  Q  A  R  Q  Q  P  I  N  Y  S  R  *  K  Y  Q  Q  D  Q  V  S  *  P  N  N  S  M  D  G  *  R  R  A  L  E  N  R  H  G  K  F  E  E  T  Q  Q  G  L  S  Y  N  V  *  E  Q  R  L  Y  E  M  G  Q  G  *  T  P  T  S  L  N  *  R  H  W  K  L  G  M  P  *  F  L  P  S  F  I  E  R  Y  *  W  V  G  S  I  R  *  G  T  Q  V  R  A  E  E  Q  Y  G  S  Y  S  I  *  V  L  Y  T  W  K  I  R  Y  E  K  R  *  V  R  S  R  S  R  F  C  R  *  F  E  G  I  E  T  R  L  R  *  L  L  R  I  E  V  I  L  R  S  K  Q  K  S  K  G  Y  L  G  L  V  *  *  I  R  Y  I  P  R  G  *  *  C  E  G  M  G  W  D  S  I  D  S  S  *  S  M  A  *  S  K  W  *  A  V  G  S  M  A  C  G  G  T  R  N  P  K  N  S  K  G  S  I  E  Q  Q  E  D  E  Q  W  G  E  D  *  S  Y  R  N  H  T  S  T   : G  *  C  *  S  D  I  L  I  C  K  F  G  *  G  R  V  I  *  S  *  M  E  *  Y  V  C  T  R  C  L  W  T  Q  G  C  R  C  S  R  W  A  W  A  I  W  S  C  Y  I  S  Y  *  K  L  G  R  K  H  T  G  F  L  P  S  F  Q  S  T  A  K  L  Q  G  S  L  V  F  *  R  *  K  :  V  N  S  *  V  Q  *  N  N  V  Q  S  F  I  C  W  I  C  *  C  *  F  G  *  Q  E  I  V  T  Q  K  L   : D  *  *  F  S  Y  R  N  F  W  C  W  W  K  D  M  Y  N  I  E  G  L  S  N  I  G  N  *  R  R  G  T  F  I  R  V  *  Q  R  N  G  A  N  H  N  *  E  F  G  C  M  E  Y  G  Q  S  *  D  T  I  L  K  K  K  K  R  I  R  R  K  E  L  W  *  K  G  E  I  *  D  F  D  G  H  I  R  V  C  Y  F  D  I  S  T  L  F  F  L  F  I  K  L  D  I  P  R  V  K  K  N  V  Y  R  F  I  L  Y  F  Q  F  M  T  I  M  L  C  F  C  F  Q   </second_frame>
            <third_frame>   Y  P  K  K  K  K  L  K  K  I  I  *  I  K  Y  H  Y  L  S  K  P  N  H  *  N  K  I  K  I  M  D  Y  S  S  N  K  S  S  R  W  A  L  P  V  I  L  V  C  F  F  V  I  L  L  S  N  N  V  V  F  A  S  H  K  V  F  I  H  L  Q  S  Q  N  A  V  N  V  H  T  V  H  R  T  G  Y  H  F  Q  P  E  K  H  W  I  N   : D  P  N   : A  P  M  Y  F  N  G  V  Y  H  L  F  Y  Q  Y  N  P  N  G  S  V  W  G  N  I  V  W  A  H  S  V  S  K  D  L  I  N  W  I  N  L  E  P  A  I  Y  P  S  K  P  F  D  Q  F  G  T  W  S  G  S  A  T  I  L  P  G  N  K  P  V  I  L  Y  T  G  I  I  D  A  N  Q  T  Q  V  Q  N  Y  A  I  P  A  N  L  S  D  P  Y  L  R  E  W  I  K  P  D  N  N  P  L  I  I  A  D  E  S  I  N  K  T  K  F  R  D  P  T  T  A  W  M  G  K  D  G  H  W  R  I  V  M  G  S  L  R  K  H  S  R  G  L  A  I  M  Y  R  S  K  D  F  M  K  W  V  K  A  K  H  P  L  H  S  T  N  G  T  G  N  W  E  C  P  D  F  Y  P  V  S  S  K  G  T  D  G  L  D  Q  Y  G  E  E  H  K  Y  V  L  K  N  S  M  D  L  T  R  F  E  Y  Y  T  L  G  K  Y  D  T  K  K  D  R  Y  V  P  D  P  D  S  V  D  S  L  K  G  L  R  L  D  Y  G  N  F  Y  A  S  K  S  F  Y  D  P  S  K  N  R  R  V  I  W  G  W  S  N  E  S  D  I  F  P  E  D  D  N  A  K  G  W  A  G  I  Q  L  I  P  R  K  V  W  L  D  P  S  G  K  Q  L  V  Q  W  P  V  E  E  L  E  T  L  R  T  Q  K  V  Q  L  S  N  K  K  M  N  N  G  E  K  I  E  V  T  G  I  T  P  A  Q  :  A  D  V  E  V  T  F  S  F  A  S  L  D  K  A  E  S  F  D  P  K  W  N  D  M  Y  A  Q  D  V  C  G  L  K  G  A  D  V  Q  G  G  L  G  P  F  G  L  A  T  L  A  T  E  N  L  E  E  N  T  P  V  F  F  R  V  F  K  A  Q  Q  N  Y  K  V  L  L  C  S  D  A  K  R :   S  T  L  K  F  N  E  T  M  Y  K  A  S  F  A  G  F  V  D  V  D  L  A  D  K  K  L  S  L  R  S  L  :  I  D  N  S  V  I  E  T  F  G  A  G  G  K  T  C  I  T  S  R  V  Y  P  T  L  A  I  N  D  E  A  H  L  F  A  F  N  N  G  T  E  P  I  T  I  E  S  L  D  A  W  S  M  G  K  A  K  I  Q  Y  *  R  K  K  K  E  *  G  E  R  N  Y  G  K  R  G  K  Y  E  I  L  M  D  I  *  E  F  V  I  L  I  F  Q  L  Y  F  F  C  L  S  N  *  I  S  L  E  S  K  K  M  Y  I  D  L  S  S  I  F  N  L  *  Q  *  C  Y  V  F  A  F  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98131" stop="98344"/>
                    <exon start="98601" stop="98609"/>
                    <exon start="98943" stop="99961"/>
                    <exon start="100690" stop="100934"/>
                    <exon start="101033" stop="101129"/>
                    <exon start="101205" stop="101387"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1764</number_coding_nucleotides>
                  <number_encoded_amino_acids>588</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKIKIMDYSSNKSSRWALPVILVCFFVILLSNNVVFASHKVFIHLQSQNAVNVHTVHRTGYHFQPEKHWINDPNAPMYFNGVYHLFYQYNPNGSVWGNIVWAHSVSKDLINWINLEPAIYPSKPFDQFGTWSGSATILPGNKPVILYTGIIDANQTQVQNYAIPANLSDPYLREWIKPDNNPLIIADESINKTKFRDPTTAWMGKDGHWRIVMGSLRKHSRGLAIMYRSKDFMKWVKAKHPLHSTNGTGNWECPDFYPVSSKGTDGLDQYGEEHKYVLKNSMDLTRFEYYTLGKYDTKKDRYVPDPDSVDSLKGLRLDYGNFYASKSFYDPSKNRRVIWGWSNESDIFPEDDNAKGWAGIQLIPRKVWLDPSGKQLVQWPVEELETLRTQKVQLSNKKMNNGEKIEVTGITPAQADVEVTFSFASLDKAESFDPKWNDMYAQDVCGLKGADVQGGLGPFGLATLATENLEENTPVFFRVFKAQQNYKVLLCSDAKRSTLKFNETMYKASFAGFVDVDLADKKLSLRSLIDNSVIETFGAGGKTCITSRVYPTLAINDEAHLFAFNNGTEPITIESLDAWSMGKAKIQY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="98114" e_stop="98344"/>
            <exon e_start="98573" e_stop="98609"/>
            <exon e_start="98943" e_stop="99961"/>
            <exon e_start="100690" e_stop="100934"/>
            <exon e_start="101033" e_stop="101129"/>
            <exon e_start="101205" e_stop="101404"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="0.996"/>
          <exon-intron don_prob="1.000" acc_prob="0.813" e_score="0.973"/>
          <exon-intron don_prob="1.000" acc_prob="0.982" e_score="0.985"/>
          <exon-intron don_prob="0.981" acc_prob="0.951" e_score="0.996"/>
          <exon-intron don_prob="0.964" acc_prob="0.974" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="98114" e_stop="98344" e_length="231"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="98345" i_stop="98572" i_length="228"/>
          </intron>
          <exon e_serial="2" e_score="0.973">
            <gDNA_exon_boundary e_start="98573" e_stop="98609" e_length="37"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.813">
            <gDNA_intron_boundary i_start="98610" i_stop="98942" i_length="333"/>
          </intron>
          <exon e_serial="3" e_score="0.985">
            <gDNA_exon_boundary e_start="98943" e_stop="99961" e_length="1019"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="99962" i_stop="100689" i_length="728"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="100690" e_stop="100934" e_length="245"/>
          </exon>
          <intron i_serial="4" don_prob="0.981" acc_prob="0.951">
            <gDNA_intron_boundary i_start="100935" i_stop="101032" i_length="98"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="101033" e_stop="101129" e_length="97"/>
          </exon>
          <intron i_serial="5" don_prob="0.964" acc_prob="0.974">
            <gDNA_intron_boundary i_start="101130" i_stop="101204" i_length="75"/>
          </intron>
          <exon e_serial="6" e_score="0.990">
            <gDNA_exon_boundary e_start="101205" e_stop="101404" e_length="200"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98114" stop="98344"/>
              <exon start="98573" stop="98609"/>
              <exon start="98943" stop="99346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98965" stop="99697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99115" stop="99793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99143" stop="99617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99152" stop="99574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99482" stop="99961"/>
              <exon start="100690" stop="100865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99615" stop="99961"/>
              <exon start="100690" stop="100929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99705" stop="99961"/>
              <exon start="100690" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546910" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99739" stop="99961"/>
              <exon start="100690" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547396" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99814" stop="99961"/>
              <exon start="100690" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373643" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100703" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225360" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100737" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218044" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100760" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225721" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100793" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225386" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100800" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225547" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100880" stop="100934"/>
              <exon start="101033" stop="101129"/>
              <exon start="101205" stop="101402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217968" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTTAGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAAATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATG : GATGTCTCTTGGTCAAAACATACAATAGATCCCAATG : CACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAG : GCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAG : GTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTG : ATTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGAATA</gDNA_template>
            <first_frame> Q  S  P  I  I  K  I  K  *  K  L  W  I  I  H  L  I  K  V  L  V  G  L  C  Q  L  S  *  F  A  F  L  *  F  Y  Y  P  I  M  L  F  L  L  L  I  K  F  L  F  T  C  N  L  K  M  L  *  M  F  I  L  F  I  E  L  V  I  I  F  S  P  K  N  I  G  S  M  :  D  V  S  W  S  K  H  T  I  D  P  N   : A  P  M  Y  F  N  G  V  Y  H  L  F  Y  Q  Y  N  P  N  G  S  V  W  G  N  I  V  W  A  H  S  V  S  K  D  L  I  N  W  I  N  L  E  P  A  I  Y  P  S  K  P  F  D  Q  F  G  T  W  S  G  S  A  T  I  L  P  G  N  K  P  V  I  L  Y  T  G  I  I  D  A  N  Q  T  Q  V  Q  N  Y  A  I  P  A  N  L  S  D  P  Y  L  R  E  W  I  K  P  D  N  N  P  L  I  I  A  D  E  S  I  N  K  T  K  F  R  D  P  T  T  A  W  M  G  K  D  G  H  W  R  I  V  M  G  S  L  R  K  H  S  R  G  L  A  I  M  Y  R  S  K  D  F  M  K  W  V  K  A  K  H  P  L  H  S  T  N  G  T  G  N  W  E  C  P  D  F  Y  P  V  S  S  K  G  T  D  G  L  D  Q  Y  G  E  E  H  K  Y  V  L  K  N  S  M  D  L  T  R  F  E  Y  Y  T  L  G  K  Y  D  T  K  K  D  R  Y  V  P  D  P  D  S  V  D  S  L  K  G  L  R  L  D  Y  G  N  F  Y  A  S  K  S  F  Y  D  P  S  K  N  R  R  V  I  W  G  W  S  N  E  S  D  I  F  P  E  D  D  N  A  K  G  W  A  G  I  Q  L  I  P  R  K  V  W  L  D  P  S  G  K  Q  L  V  Q  W  P  V  E  E  L  E  T  L  R  T  Q  K  V  Q  L  S  N  K  K  M  N  N  G  E  K  I  E  V  T  G  I  T  P  A  Q  :  A  D  V  E  V  T  F  S  F  A  S  L  D  K  A  E  S  F  D  P  K  W  N  D  M  Y  A  Q  D  V  C  G  L  K  G  A  D  V  Q  G  G  L  G  P  F  G  L  A  T  L  A  T  E  N  L  E  E  N  T  P  V  F  F  R  V  F  K  A  Q  Q  N  Y  K  V  L  L  C  S  D  A  K  R :   S  T  L  K  F  N  E  T  M  Y  K  A  S  F  A  G  F  V  D  V  D  L  A  D  K  K  L  S  L  R  S  L  :  I  D  N  S  V  I  E  T  F  G  A  G  G  K  T  C  I  T  S  R  V  Y  P  T  L  A  I  N  D  E  A  H  L  F  A  F  N  N  G  T  E  P  I  T  I  E  S  L  D  A  W  S  M  G  K  A  K  I  Q  Y  *  R  K  K  K  E   </first_frame>
            <second_frame>  K  A  Q  S  L  K  *  N  K  N  Y  G  L  F  I  *  *  K  F  S  L  G  F  A  S  Y  L  S  L  L  F  C  N  F  I  I  Q  *  C  C  F  C  F  S  *  S  F  Y  S  L  A  I  S  K  C  C  K  C  S  Y  C  S  S  N  W  L  S  F  S  A  R  K  T  L  D  Q  W :   M  S  L  G  Q  N  I  Q  *  I  P  M  :  H  Q  C  I  S  M  E  C  I  I  Y  S  T  S  T  T  Q  M  V  Q  Y  G  V  T  L  F  G  L  I  P  F  Q  K  T  *  S  I  G  S  I  *  N  L  Q  F  T  H  Q  S  H  L  I  N  S  V  P  G  L  D  Q  Q  P  S  Y  L  V  T  S  Q  S  S  C  T  P  E  S  *  M  P  T  K  P  K  S  K  T  T  Q  S  Q  L  T  Y  P  I  H  I  S  A  N  G  S  S  Q  T  T  T  H  *  L  *  P  M  K  V  S  T  R  P  S  F  V  T  Q  Q  Q  H  G  W  V  K  T  G  I  G  E  S  S  W  E  V  *  G  N  T  A  G  A  *  L  *  C  I  G  A  K  T  L  *  N  G  S  R  L  N  T  H  F  T  Q  L  T  A  L  E  T  G  N  A  L  I  F  T  Q  F  H  R  K  V  L  M  G  W  I  N  T  V  R  N  T  S  T  C  *  R  T  V  W  I  L  L  D  L  S  I  I  H  L  E  N  T  I  R  K  K  I  G  T  F  Q  I  Q  I  L  S  I  V  *  R  D  *  D  S  I  T  V  T  S  T  H  R  S  H  S  T  I  Q  A  K  I  E  G  L  S  G  V  G  L  M  N  Q  I  Y  S  Q  R  M  I  M  R  R  D  G  L  G  F  N  *  F  L  V  K  Y  G  L  I  Q  V  V  S  S  W  F  N  G  L  W  R  N  *  K  P  *  E  L  K  R  F  N  *  A  T  R  R  *  T  M  G  R  R  L  K  L  Q  E  S  H  Q  H  R :   L  M  L  K  *  H  S  H  L  Q  V  W  I  R  Q  S  H  L  I  L  N  G  M  I  C  M  H  K  M  F  V  D  S  R  V  Q  M  F  K  V  G  L  G  H  L  V  L  L  H  *  L  L  K  T  W  K  K  T  H  R  F  S  S  E  F  S  K  H  S  K  T  T  R  F  S  C  V  L  T  L  K   : G  Q  L  L  S  S  M  K  Q  C  T  K  L  H  L  L  D  L  L  M  L  I  W  L  T  R  N  C  H  S  E  A  * :   L  I  I  Q  L  *  K  L  L  V  L  V  E  R  H  V  *  H  R  G  F  I  Q  H  W  Q  L  T  T  R  H  I  Y  S  R  L  T  T  E  R  S  Q  S  Q  L  R  V  W  M  H  G  V  W  A  K  L  R  Y  N  I  E  E  K  K  K  N  </second_frame>
            <third_frame>   K  P  N  H  *  N  K  I  K  I  M  D  Y  S  S  N  K  S  S  R  W  A  L  P  V  I  L  V  C  F  F  V  I  L  L  S  N  N  V  V  F  A  S  H  K  V  F  I  H  L  Q  S  Q  N  A  V  N  V  H  T  V  H  R  T  G  Y  H  F  Q  P  E  K  H  W  I  N   : G  C  L  L  V  K  T  Y  N  R  S  Q  C :   T  N  V  F  Q  W  S  V  S  S  I  L  P  V  Q  P  K  W  F  S  M  G  *  H  C  L  G  S  F  R  F  K  R  L  D  Q  L  D  Q  F  R  T  C  N  L  P  I  K  A  I  *  S  I  R  Y  L  V  W  I  S  N  H  P  T  W  *  Q  A  S  H  L  V  H  R  N  H  R  C  Q  P  N  P  S  P  K  L  R  N  P  S  *  L  I  R  S  I  S  P  R  M  D  Q  A  R  Q  Q  P  I  N  Y  S  R  *  K  Y  Q  Q  D  Q  V  S  *  P  N  N  S  M  D  G  *  R  R  A  L  E  N  R  H  G  K  F  E  E  T  Q  Q  G  L  S  Y  N  V  *  E  Q  R  L  Y  E  M  G  Q  G  *  T  P  T  S  L  N  *  R  H  W  K  L  G  M  P  *  F  L  P  S  F  I  E  R  Y  *  W  V  G  S  I  R  *  G  T  Q  V  R  A  E  E  Q  Y  G  S  Y  S  I  *  V  L  Y  T  W  K  I  R  Y  E  K  R  *  V  R  S  R  S  R  F  C  R  *  F  E  G  I  E  T  R  L  R  *  L  L  R  I  E  V  I  L  R  S  K  Q  K  S  K  G  Y  L  G  L  V  *  *  I  R  Y  I  P  R  G  *  *  C  E  G  M  G  W  D  S  I  D  S  S  *  S  M  A  *  S  K  W  *  A  V  G  S  M  A  C  G  G  T  R  N  P  K  N  S  K  G  S  I  E  Q  Q  E  D  E  Q  W  G  E  D  *  S  Y  R  N  H  T  S  T   : G  *  C  *  S  D  I  L  I  C  K  F  G  *  G  R  V  I  *  S  *  M  E  *  Y  V  C  T  R  C  L  W  T  Q  G  C  R  C  S  R  W  A  W  A  I  W  S  C  Y  I  S  Y  *  K  L  G  R  K  H  T  G  F  L  P  S  F  Q  S  T  A  K  L  Q  G  S  L  V  F  *  R  *  K  :  V  N  S  *  V  Q  *  N  N  V  Q  S  F  I  C  W  I  C  *  C  *  F  G  *  Q  E  I  V  T  Q  K  L   : D  *  *  F  S  Y  R  N  F  W  C  W  W  K  D  M  Y  N  I  E  G  L  S  N  I  G  N  *  R  R  G  T  F  I  R  V  *  Q  R  N  G  A  N  H  N  *  E  F  G  C  M  E  Y  G  Q  S  *  D  T  I  L  K  K  K  K  R  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="23" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98285" stop="98344"/>
                    <exon start="98573" stop="98609"/>
                    <exon start="98943" stop="99961"/>
                    <exon start="100690" stop="100934"/>
                    <exon start="101033" stop="101129"/>
                    <exon start="101205" stop="101387"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1638</number_coding_nucleotides>
                  <number_encoded_amino_acids>546</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MFILFIELVIIFSPKNIGSMDVSWSKHTIDPNAPMYFNGVYHLFYQYNPNGSVWGNIVWAHSVSKDLINWINLEPAIYPSKPFDQFGTWSGSATILPGNKPVILYTGIIDANQTQVQNYAIPANLSDPYLREWIKPDNNPLIIADESINKTKFRDPTTAWMGKDGHWRIVMGSLRKHSRGLAIMYRSKDFMKWVKAKHPLHSTNGTGNWECPDFYPVSSKGTDGLDQYGEEHKYVLKNSMDLTRFEYYTLGKYDTKKDRYVPDPDSVDSLKGLRLDYGNFYASKSFYDPSKNRRVIWGWSNESDIFPEDDNAKGWAGIQLIPRKVWLDPSGKQLVQWPVEELETLRTQKVQLSNKKMNNGEKIEVTGITPAQADVEVTFSFASLDKAESFDPKWNDMYAQDVCGLKGADVQGGLGPFGLATLATENLEENTPVFFRVFKAQQNYKVLLCSDAKRSTLKFNETMYKASFAGFVDVDLADKKLSLRSLIDNSVIETFGAGGKTCITSRVYPTLAINDEAHLFAFNNGTEPITIESLDAWSMGKAKIQY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="101628" PGL_stop="102676"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101628" e_stop="101645"/>
            <exon e_start="102338" e_stop="102676"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.667"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.667">
            <gDNA_exon_boundary e_start="101628" e_stop="101645" e_length="18"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="101646" i_stop="102337" i_length="692"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="102338" e_stop="102676" e_length="339"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101628" stop="101645"/>
              <exon start="102338" stop="102676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225196" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTATTTATTTTATTGAT : TGGTAAAATCTACAAAACATTGAAAGGTATAAAATGTTTGGTAAGTCAGAATACATTAGCATAAATATTGGAGCTCACAGAGTCATTTGCTGACTCTTGCATATACATAATTCCTCCTTATCATTAACAAAGTAGAAATAAATATGATATATACTATGAAAACACAAATAAGTCAAACAAAAAAAAAGAGATGAACTTTGTAATGAATGGACACAGAAAACTGATCTGTTGCTGTTGCTCAGACAGACGAAACATGTTGCCTCAGCTGTGTCGAAAAAAAAGAAACAAGATGATGTGGGAACAAAGGTTCTTGAATTATGTTGGCAAGTCAGAATATCA</gDNA_template>
            <first_frame> C  I  Y  F  I  D  :  W  *  N  L  Q  N  I  E  R  Y  K  M  F  G  K  S  E  Y  I  S  I  N  I  G  A  H  R  V  I  C  *  L  L  H  I  H  N  S  S  L  S  L  T  K  *  K  *  I  *  Y  I  L  *  K  H  K  *  V  K  Q  K  K  R  D  E  L  C  N  E  W  T  Q  K  T  D  L  L  L  L  L  R  Q  T  K  H  V  A  S  A  V  S  K  K  K  K  Q  D  D  V  G  T  K  V  L  E  L  C  W  Q  V  R  I  S </first_frame>
            <second_frame>  V  F  I  L  L  I :   G  K  I  Y  K  T  L  K  G  I  K  C  L  V  S  Q  N  T  L  A  *  I  L  E  L  T  E  S  F  A  D  S  C  I  Y  I  I  P  P  Y  H  *  Q  S  R  N  K  Y  D  I  Y  Y  E  N  T  N  K  S  N  K  K  K  E  M  N  F  V  M  N  G  H  R  K  L  I  C  C  C  C  S  D  R  R  N  M  L  P  Q  L  C  R  K  K  R  N  K  M  M  W  E  Q  R  F  L  N  Y  V  G  K  S  E  Y   </second_frame>
            <third_frame>   Y  L  F  Y  *   : L  V  K  S  T  K  H  *  K  V  *  N  V  W  *  V  R  I  H  *  H  K  Y  W  S  S  Q  S  H  L  L  T  L  A  Y  T  *  F  L  L  I  I  N  K  V  E  I  N  M  I  Y  T  M  K  T  Q  I  S  Q  T  K  K  K  R  *  T  L  *  *  M  D  T  E  N  *  S  V  A  V  A  Q  T  D  E  T  C  C  L  S  C  V  E  K  K  E  T  R  *  C  G  N  K  G  S  *  I  M  L  A  S  Q  N  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102465" stop="102674"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSRNKYDIYYENTNKSNKKKEMNFVMNGHRKLICCCCSDRRNMLPQLCRKKRNKMMWEQRFLNYVGKSEY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="-" PGL_start="103672" PGL_stop="102518"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103672" e_stop="102518"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="103672" e_stop="102518" e_length="1155"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103672" stop="102928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103320" stop="102921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103042" stop="102518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251861" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGTTGAAAATGAAAGTTGCTATCTTTTTGTTCCAACAAAAGATGCTTTGAATCTCCCTAATTTAGATGTGGTTTGCAGTATATTTCTATTTATATTCATAACATAACTTTGCTATGGCAAGAATGATGATAAACTATTAGATGTGTGAGTGGTGTATTCCTCTATGAGCTCAATCATCGAGGCTTATTGATATTCTGACTTGCCTTCTTAAAGTACTTACAATAGAAATAAATGGAACTTTTTAATTTTGTGTTCTACAAATATGCTTCATTATTGCATTTGTACTAATTTTTCACTTGAAGTTGTAGCAAATTGTTAAGTTGAAATATTTATCTGATTTAGACCTTAACTGAAGTTACACGTCAGGATATAGCCCATACTTTTTGTGGTGTCACATCCGTTGTTGATTCTACTTTTTTCTAGTTGAGGTGGAATTTGTGCTATATTTAGCCTTTGCTATGGCAAGCATGATGAAAAACAATTAGATGTGCGAGTGGTGAATTCCTCTATGAGCTCAATCATCGAGGCTTATTGATATTCTGACTTGCATTTGTGATTCACTCTTTTATTTTTTGATTTACATGGTGTTCATTGATCCCTTAATTTTTGTTGGACCTAACTATGACTATAAAAGTTCATTATTAACATTACTAACAGAAGATTTTGATGTAAATTATTATTAAATATATAATTTGGCTTCTTTTGGCATTTATAGTTAATTTTAGGTAGGTATGGGAATGATGAATATCTGTTGTGTGAAGGGAGAACTCCCTGTTGAATGTTTACACTAACTGCTTATTGATATTCTGAGCTTTCTCTTTTGATATTGTGCATCCATAATGTATTTGTTTCCACTCTTTCTTTCTTCCTGGTGTATTTTTTGTGTGTAGGTGATCTGCTAATACACTTTGGTAATTCAATTTATGGCAAGAATGATGAGTCTATTAGATGTGCCAGGGTTTTTTCCCCAATGAGCTAAAACTTCTGAGGCTTATTGATATTCTGACTTGCCAACATAATTCAAGAACCTTTGTTCCCACATCATCTTGTTTCTTTTTTTTCGACACAGCTGAGGCAACATGTTTCGTCTGTCTGAGCAACAGCAACAGATCAGTTTTCTGTGTCCATTCATTACAAAGTTCATCTCTTTTTTT</gDNA_template>
            <first_frame> L  L  K  M  K  V  A  I  F  L  F  Q  Q  K  M  L  *  I  S  L  I  *  M  W  F  A  V  Y  F  Y  L  Y  S  *  H  N  F  A  M  A  R  M  M  I  N  Y  *  M  C  E  W  C  I  P  L  *  A  Q  S  S  R  L  I  D  I  L  T  C  L  L  K  V  L  T  I  E  I  N  G  T  F  *  F  C  V  L  Q  I  C  F  I  I  A  F  V  L  I  F  H  L  K  L  *  Q  I  V  K  L  K  Y  L  S  D  L  D  L  N  *  S  Y  T  S  G  Y  S  P  Y  F  L  W  C  H  I  R  C  *  F  Y  F  F  L  V  E  V  E  F  V  L  Y  L  A  F  A  M  A  S  M  M  K  N  N  *  M  C  E  W  *  I  P  L  *  A  Q  S  S  R  L  I  D  I  L  T  C  I  C  D  S  L  F  Y  F  L  I  Y  M  V  F  I  D  P  L  I  F  V  G  P  N  Y  D  Y  K  S  S  L  L  T  L  L  T  E  D  F  D  V  N  Y  Y  *  I  Y  N  L  A  S  F  G  I  Y  S  *  F  *  V  G  M  G  M  M  N  I  C  C  V  K  G  E  L  P  V  E  C  L  H  *  L  L  I  D  I  L  S  F  L  F  *  Y  C  A  S  I  M  Y  L  F  P  L  F  L  S  S  W  C  I  F  C  V  *  V  I  C  *  Y  T  L  V  I  Q  F  M  A  R  M  M  S  L  L  D  V  P  G  F  F  P  Q  *  A  K  T  S  E  A  Y  *  Y  S  D  L  P  T  *  F  K  N  L  C  S  H  I  I  L  F  L  F  F  R  H  S  *  G  N  M  F  R  L  S  E  Q  Q  Q  Q  I  S  F  L  C  P  F  I  T  K  F  I  S  F  F </first_frame>
            <second_frame>  C  *  K  *  K  L  L  S  F  C  S  N  K  R  C  F  E  S  P  *  F  R  C  G  L  Q  Y  I  S  I  Y  I  H  N  I  T  L  L  W  Q  E  *  *  *  T  I  R  C  V  S  G  V  F  L  Y  E  L  N  H  R  G  L  L  I  F  *  L  A  F  L  K  Y  L  Q  *  K  *  M  E  L  F  N  F  V  F  Y  K  Y  A  S  L  L  H  L  Y  *  F  F  T  *  S  C  S  K  L  L  S  *  N  I  Y  L  I  *  T  L  T  E  V  T  R  Q  D  I  A  H  T  F  C  G  V  T  S  V  V  D  S  T  F  F  *  L  R  W  N  L  C  Y  I  *  P  L  L  W  Q  A  *  *  K  T  I  R  C  A  S  G  E  F  L  Y  E  L  N  H  R  G  L  L  I  F  *  L  A  F  V  I  H  S  F  I  F  *  F  T  W  C  S  L  I  P  *  F  L  L  D  L  T  M  T  I  K  V  H  Y  *  H  Y  *  Q  K  I  L  M  *  I  I  I  K  Y  I  I  W  L  L  L  A  F  I  V  N  F  R  *  V  W  E  *  *  I  S  V  V  *  R  E  N  S  L  L  N  V  Y  T  N  C  L  L  I  F  *  A  F  S  F  D  I  V  H  P  *  C  I  C  F  H  S  F  F  L  P  G  V  F  F  V  C  R  *  S  A  N  T  L  W  *  F  N  L  W  Q  E  *  *  V  Y  *  M  C  Q  G  F  F  P  N  E  L  K  L  L  R  L  I  D  I  L  T  C  Q  H  N  S  R  T  F  V  P  T  S  S  C  F  F  F  F  D  T  A  E  A  T  C  F  V  C  L  S  N  S  N  R  S  V  F  C  V  H  S  L  Q  S  S  S  L  F   </second_frame>
            <third_frame>   V  E  N  E  S  C  Y  L  F  V  P  T  K  D  A  L  N  L  P  N  L  D  V  V  C  S  I  F  L  F  I  F  I  T  *  L  C  Y  G  K  N  D  D  K  L  L  D  V  *  V  V  Y  S  S  M  S  S  I  I  E  A  Y  *  Y  S  D  L  P  S  *  S  T  Y  N  R  N  K  W  N  F  L  I  L  C  S  T  N  M  L  H  Y  C  I  C  T  N  F  S  L  E  V  V  A  N  C  *  V  E  I  F  I  *  F  R  P  *  L  K  L  H  V  R  I  *  P  I  L  F  V  V  S  H  P  L  L  I  L  L  F  S  S  *  G  G  I  C  A  I  F  S  L  C  Y  G  K  H  D  E  K  Q  L  D  V  R  V  V  N  S  S  M  S  S  I  I  E  A  Y  *  Y  S  D  L  H  L  *  F  T  L  L  F  F  D  L  H  G  V  H  *  S  L  N  F  C  W  T  *  L  *  L  *  K  F  I  I  N  I  T  N  R  R  F  *  C  K  L  L  L  N  I  *  F  G  F  F  W  H  L  *  L  I  L  G  R  Y  G  N  D  E  Y  L  L  C  E  G  R  T  P  C  *  M  F  T  L  T  A  Y  *  Y  S  E  L  S  L  L  I  L  C  I  H  N  V  F  V  S  T  L  S  F  F  L  V  Y  F  L  C  V  G  D  L  L  I  H  F  G  N  S  I  Y  G  K  N  D  E  S  I  R  C  A  R  V  F  S  P  M  S  *  N  F  *  G  L  L  I  F  *  L  A  N  I  I  Q  E  P  L  F  P  H  H  L  V  S  F  F  S  T  Q  L  R  Q  H  V  S  S  V  *  A  T  A  T  D  Q  F  S  V  S  I  H  Y  K  V  H  L  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102723" stop="102520"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MCQGFFPNELKLLRLIDILTCQHNSRTFVPTSSCFFFFDTAEATCFVCLSNSNRSVFCVHSLQSSSLF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="-" PGL_start="105046" PGL_stop="104612"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105046" e_stop="104612"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="105046" e_stop="104612" e_length="435"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105046" stop="104612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334450" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAAAAATTGTTTTTTTTGTATGTGAAGTGTGTATGATGCGTGGATTGATCAAAATGCTATTGGGTATGCATTAATTTCTCTTAAAGATGTGATTTTTGGAATATGTTGCAACATTTTGATCGATTGGAGCTATATAACAAAGTGTGTTGTGTATGGATTAATTTGTTTCATTTTGCGCCGCCCTTAAGATCGCCTTCCATTATGCTCCATGGAAGCGTTTTGAGTCATAGCTGCGCTATATTAATTGTATATATGCACACTCTTTTGTATGTACAATTGTATATATGAAAGGTGTGTTATATGCTGGAGTTTTCTCTTTAGGGTTTTCCTTTAGTGAGTCTCCTTTTGCCTCGCCTTATTTCAGGAGTCATATCCTTTTTTTTTGGTTTTGTCTTTCCCAATTGGGGATATAGAACCAAAAGATGTTTTGAATG</gDNA_template>
            <first_frame> L  K  I  V  F  F  V  C  E  V  C  M  M  R  G  L  I  K  M  L  L  G  M  H  *  F  L  L  K  M  *  F  L  E  Y  V  A  T  F  *  S  I  G  A  I  *  Q  S  V  L  C  M  D  *  F  V  S  F  C  A  A  L  K  I  A  F  H  Y  A  P  W  K  R  F  E  S  *  L  R  Y  I  N  C  I  Y  A  H  S  F  V  C  T  I  V  Y  M  K  G  V  L  Y  A  G  V  F  S  L  G  F  S  F  S  E  S  P  F  A  S  P  Y  F  R  S  H  I  L  F  F  W  F  C  L  S  Q  L  G  I  *  N  Q  K  M  F  *  M </first_frame>
            <second_frame>  *  K  L  F  F  L  Y  V  K  C  V  *  C  V  D  *  S  K  C  Y  W  V  C  I  N  F  S  *  R  C  D  F  W  N  M  L  Q  H  F  D  R  L  E  L  Y  N  K  V  C  C  V  W  I  N  L  F  H  F  A  P  P  L  R  S  P  S  I  M  L  H  G  S  V  L  S  H  S  C  A  I  L  I  V  Y  M  H  T  L  L  Y  V  Q  L  Y  I  *  K  V  C  Y  M  L  E  F  S  L  *  G  F  P  L  V  S  L  L  L  P  R  L  I  S  G  V  I  S  F  F  F  G  F  V  F  P  N  W  G  Y  R  T  K  R  C  F  E   </second_frame>
            <third_frame>   K  N  C  F  F  C  M  *  S  V  Y  D  A  W  I  D  Q  N  A  I  G  Y  A  L  I  S  L  K  D  V  I  F  G  I  C  C  N  I  L  I  D  W  S  Y  I  T  K  C  V  V  Y  G  L  I  C  F  I  L  R  R  P  *  D  R  L  P  L  C  S  M  E  A  F  *  V  I  A  A  L  Y  *  L  Y  I  C  T  L  F  C  M  Y  N  C  I  Y  E  R  C  V  I  C  W  S  F  L  F  R  V  F  L  *  *  V  S  F  C  L  A  L  F  Q  E  S  Y  P  F  F  L  V  L  S  F  P  I  G  D  I  E  P  K  D  V  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104961" stop="104758"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RCDFWNMLQHFDRLELYNKVCCVWINLFHFAPPLRSPSIMLHGSVLSHSCAILIVYMHTLLYVQLYI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="-" PGL_start="108858" PGL_stop="105609"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108858" e_stop="108769"/>
            <exon e_start="108640" e_stop="108521"/>
            <exon e_start="108421" e_stop="108376"/>
            <exon e_start="107930" e_stop="107845"/>
            <exon e_start="106834" e_stop="106705"/>
            <exon e_start="106577" e_stop="106239"/>
            <exon e_start="105659" e_stop="105609"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.008" acc_prob="0.995" e_score="1.000"/>
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          <description PGL_serial="27" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTTTGTGAGCTTCCACTGCAAATTAGGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG : TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT : CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG : GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG : GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG : AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT : AAAAATGACATAAATAAACTAAACTTTTAACGATTGATGTACATGAATCTT</gDNA_template>
            <first_frame> I  F  V  S  F  H  C  K  L  G  F  L  Q  A  A  E  Y  L  *  I  F  S  L  S  S  S  A  E  A  M  :  S  R  R  K  T  R  E  P  K  E  E  T  V  T  L  G  P  A  T  R  E  G  E  L  V  F  G  V  A  H  I  F  A  S  F  N  D  T  F  I  :  H  V  T  D  L  S  G  R  E  T  M  V  R  I  T   : G  G  M  K  V  K  A  D  R  D  E  S  S  P  Y  A  A  M  L  A  A  Q  D  V  S  Q  R  C  K  :  E  L  G  I  N  A  L  H  I  K  L  R  A  T  G  G  N  K  T  K  T  P  G  P  G  A  Q  S  A  L  R  A  L  A  R  S  G  M  K  I  G  R  I   : E  D  V  T  P  I  P  T  D  S  T  R  R  K  G  G  R  R  G  R  R  L  *  R  L  F  L  F  S  A  A  C  C  K  L  E  E  N  I  V  V  E  K  C  S  F  R  Y  L  F  T  F  D  F  *  T  L  C  S  *  A  L  L  V  S  K  P  P  S  F  *  V  C  Q  L  F  E  I  V  K  F  S  *  I  W  F  M  Q  A  N  C  W  I  N  L  Y  S  F  Y  L  H  N  S  V  S  Y  K  A  L  F  H  Y  G   : *  K  *  H  K  *  T  K  L  L  T  I  D  V  H  E  S  </first_frame>
            <second_frame>  F  L  *  A  S  T  A  N  *  G  F  F  K  L  L  S  I  S  E  F  S  H  Y  Q  A  Q  L  K  P  C :   R  G  E  R  P  G  S  L  R  K  R  L  L  H  L  D  Q  Q  R  G  K  V  N  W  C  S  V  L  H  T  F  L  H  R  S  M  I  H  S  F :   T  L  L  I  C  L  E  E  K  L  W  F  A  L  L  :  V  E  *  R  *  R  L  T  E  M  S  L  L  R  M  L  L  C  L  Q  L  R  M  C  H  S  D  A  R :   N  L  E  L  M  L  F  T  L  S  S  E  L  Q  E  A  T  R  P  R  L  L  V  L  V  P  S  P  L  L  E  L  W  L  V  L  A  *  K  L  D  V  *  :  R  M  L  L  Q  F  P  P  I  V  L  A  E  R  V  V  E  G  E  G  G  C  E  D  S  F  S  F  L  Q  H  V  A  N  W  R  K  I  L  L  S  K  N  A  A  F  D  I  Y  L  H  L  I  S  E  H  S  V  V  E  H  F  W  F  R  N  H  L  H  F  E  F  A  S  F  S  R  *  L  S  S  L  K  F  G  L  C  R  L  I  V  G  *  I  Y  T  L  F  I  F  T  I  L  L  V  I  K  L  Y  F  I  M  D  :  K  N  D  I  N  K  L  N  F  *  R  L  M  Y  M  N  L </second_frame>
            <third_frame>   F  C  E  L  P  L  Q  I  R  V  S  S  S  C  *  V  S  L  N  F  L  T  I  K  L  S  *  S  H   : V  E  E  K  D  Q  G  A  *  G  R  D  C  Y  T  W  T  S  N  E  G  R  *  I  G  V  R  C  C  T  H  F  C  I  V  Q  *  Y  I  H   : S  R  Y  *  F  V  W  K  R  N  Y  G  S  H  Y  W :   W  N  E  G  E  G  *  Q  R  *  V  F  S  V  C  C  Y  A  C  S  S  G  C  V  T  A  M  Q   : G  T  W  N  *  C  S  S  H  *  A  P  S  Y  R  R  Q  Q  D  Q  D  S  W  S  W  C  P  V  R  S  *  S  F  G  S  F  W  H  E  N  W  T  Y  R :   G  C  Y  S  N  S  H  R  *  Y  S  Q  K  G  W  *  K  G  K  E  A  V  K  T  L  S  L  F  C  S  M  L  Q  I  G  G  K  Y  C  C  R  K  M  Q  L  S  I  S  I  Y  I  *  F  L  N  T  L  *  L  S  T  F  G  F  E  T  T  F  I  L  S  L  P  A  F  R  D  S  *  V  L  L  N  L  V  Y  A  G  *  L  L  D  K  F  I  L  F  L  S  S  Q  F  C  *  L  *  S  F  I  S  L  W  I :   K  M  T  *  I  N  *  T  F  N  D  *  C  T  *  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108801" stop="108769"/>
                    <exon start="108640" stop="108521"/>
                    <exon start="108421" stop="108376"/>
                    <exon start="107930" stop="107845"/>
                    <exon start="106834" stop="106705"/>
                    <exon start="106577" stop="106510"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSLSSSAEAMSRRKTREPKEETVTLGPATREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="108858" e_stop="108769"/>
            <exon e_start="108640" e_stop="108521"/>
            <exon e_start="108421" e_stop="108376"/>
            <exon e_start="107930" e_stop="107845"/>
            <exon e_start="106834" e_stop="106705"/>
            <exon e_start="106577" e_stop="106239"/>
            <exon e_start="105699" e_stop="105689"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.008" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.256" e_score="1.000"/>
          <exon-only e_score="0.636"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108858" e_stop="108769" e_length="90"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="108640" e_stop="108521" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.008" acc_prob="0.995">
            <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="108421" e_stop="108376" e_length="46"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="107930" e_stop="107845" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="106834" e_stop="106705" e_length="130"/>
          </exon>
          <intron i_serial="5" don_prob="0.971" acc_prob="0.998">
            <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="106577" e_stop="106239" e_length="339"/>
          </exon>
          <intron i_serial="6" don_prob="0.900" acc_prob="0.256">
            <gDNA_intron_boundary i_start="106238" i_stop="105700" i_length="539"/>
          </intron>
          <exon e_serial="7" e_score="0.636">
            <gDNA_exon_boundary e_start="105699" e_stop="105689" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108858" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108834" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108831" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108830" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108830" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458997" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454938" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106328"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106328"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E617767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106330"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571109" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340321" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460152" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567788" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108828" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108828" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108828" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106303"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445241" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108828" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345234" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108828" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348079" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108828" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108828" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325907" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108828" stop="108769"/>
              <exon start="108640" stop="108521"/>
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            <gDNA_exon_coordinates>
              <exon start="108789" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108634" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108603" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598303" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108586" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108575" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252705" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108565" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108563" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302621" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108559" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588745" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108556" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251038" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108542" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284928" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108414" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108405" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250400" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107902" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106239"/>
              <exon start="105699" stop="105689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106786" stop="106705"/>
              <exon start="106577" stop="106239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106740" stop="106705"/>
              <exon start="106577" stop="106276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106541" stop="106275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216159" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106534" stop="106275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216401" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTTTGTGAGCTTCCACTGCAAATTAGGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG : TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT : CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG : GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG : GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG : AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT : GTAACAAATAA</gDNA_template>
            <first_frame> I  F  V  S  F  H  C  K  L  G  F  L  Q  A  A  E  Y  L  *  I  F  S  L  S  S  S  A  E  A  M  :  S  R  R  K  T  R  E  P  K  E  E  T  V  T  L  G  P  A  T  R  E  G  E  L  V  F  G  V  A  H  I  F  A  S  F  N  D  T  F  I  :  H  V  T  D  L  S  G  R  E  T  M  V  R  I  T   : G  G  M  K  V  K  A  D  R  D  E  S  S  P  Y  A  A  M  L  A  A  Q  D  V  S  Q  R  C  K  :  E  L  G  I  N  A  L  H  I  K  L  R  A  T  G  G  N  K  T  K  T  P  G  P  G  A  Q  S  A  L  R  A  L  A  R  S  G  M  K  I  G  R  I   : E  D  V  T  P  I  P  T  D  S  T  R  R  K  G  G  R  R  G  R  R  L  *  R  L  F  L  F  S  A  A  C  C  K  L  E  E  N  I  V  V  E  K  C  S  F  R  Y  L  F  T  F  D  F  *  T  L  C  S  *  A  L  L  V  S  K  P  P  S  F  *  V  C  Q  L  F  E  I  V  K  F  S  *  I  W  F  M  Q  A  N  C  W  I  N  L  Y  S  F  Y  L  H  N  S  V  S  Y  K  A  L  F  H  Y  G   : C  N  K  * </first_frame>
            <second_frame>  F  L  *  A  S  T  A  N  *  G  F  F  K  L  L  S  I  S  E  F  S  H  Y  Q  A  Q  L  K  P  C :   R  G  E  R  P  G  S  L  R  K  R  L  L  H  L  D  Q  Q  R  G  K  V  N  W  C  S  V  L  H  T  F  L  H  R  S  M  I  H  S  F :   T  L  L  I  C  L  E  E  K  L  W  F  A  L  L  :  V  E  *  R  *  R  L  T  E  M  S  L  L  R  M  L  L  C  L  Q  L  R  M  C  H  S  D  A  R :   N  L  E  L  M  L  F  T  L  S  S  E  L  Q  E  A  T  R  P  R  L  L  V  L  V  P  S  P  L  L  E  L  W  L  V  L  A  *  K  L  D  V  *  :  R  M  L  L  Q  F  P  P  I  V  L  A  E  R  V  V  E  G  E  G  G  C  E  D  S  F  S  F  L  Q  H  V  A  N  W  R  K  I  L  L  S  K  N  A  A  F  D  I  Y  L  H  L  I  S  E  H  S  V  V  E  H  F  W  F  R  N  H  L  H  F  E  F  A  S  F  S  R  *  L  S  S  L  K  F  G  L  C  R  L  I  V  G  *  I  Y  T  L  F  I  F  T  I  L  L  V  I  K  L  Y  F  I  M  D  :  V  T  N   </second_frame>
            <third_frame>   F  C  E  L  P  L  Q  I  R  V  S  S  S  C  *  V  S  L  N  F  L  T  I  K  L  S  *  S  H   : V  E  E  K  D  Q  G  A  *  G  R  D  C  Y  T  W  T  S  N  E  G  R  *  I  G  V  R  C  C  T  H  F  C  I  V  Q  *  Y  I  H   : S  R  Y  *  F  V  W  K  R  N  Y  G  S  H  Y  W :   W  N  E  G  E  G  *  Q  R  *  V  F  S  V  C  C  Y  A  C  S  S  G  C  V  T  A  M  Q   : G  T  W  N  *  C  S  S  H  *  A  P  S  Y  R  R  Q  Q  D  Q  D  S  W  S  W  C  P  V  R  S  *  S  F  G  S  F  W  H  E  N  W  T  Y  R :   G  C  Y  S  N  S  H  R  *  Y  S  Q  K  G  W  *  K  G  K  E  A  V  K  T  L  S  L  F  C  S  M  L  Q  I  G  G  K  Y  C  C  R  K  M  Q  L  S  I  S  I  Y  I  *  F  L  N  T  L  *  L  S  T  F  G  F  E  T  T  F  I  L  S  L  P  A  F  R  D  S  *  V  L  L  N  L  V  Y  A  G  *  L  L  D  K  F  I  L  F  L  S  S  Q  F  C  *  L  *  S  F  I  S  L  W  M :   *  Q  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108801" stop="108769"/>
                    <exon start="108640" stop="108521"/>
                    <exon start="108421" stop="108376"/>
                    <exon start="107930" stop="107845"/>
                    <exon start="106834" stop="106705"/>
                    <exon start="106577" stop="106510"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSLSSSAEAMSRRKTREPKEETVTLGPATREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="108834" e_stop="108769"/>
            <exon e_start="108640" e_stop="108521"/>
            <exon e_start="108421" e_stop="108376"/>
            <exon e_start="107930" e_stop="107845"/>
            <exon e_start="106834" e_stop="106705"/>
            <exon e_start="106577" e_stop="106270"/>
            <exon e_start="105675" e_stop="105643"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.008" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.758"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108834" e_stop="108769" e_length="66"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="108640" e_stop="108521" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.008" acc_prob="0.995">
            <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="108421" e_stop="108376" e_length="46"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="107930" e_stop="107845" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="106834" e_stop="106705" e_length="130"/>
          </exon>
          <intron i_serial="5" don_prob="0.971" acc_prob="0.998">
            <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="106577" e_stop="106270" e_length="308"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="106269" i_stop="105676" i_length="594"/>
          </intron>
          <exon e_serial="7" e_score="0.758">
            <gDNA_exon_boundary e_start="105675" e_stop="105643" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108834" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108831" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108830" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108830" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458997" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454938" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108829" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106328"/>
            </gDNA_exon_coordinates>
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              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482151" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108816" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108815" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108814" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564711" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108813" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108809" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108807" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E565887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108804" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564789" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106794"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564348" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108802" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108794" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108789" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108634" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108603" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598303" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108586" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108565" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108559" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588745" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108414" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106759" stop="106705"/>
              <exon start="106577" stop="106270"/>
              <exon start="105675" stop="105643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106740" stop="106705"/>
              <exon start="106577" stop="106276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106541" stop="106275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216159" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106534" stop="106275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216401" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG : TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT : CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG : GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG : GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG : AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCT : TTTTTTTTATAAAAAGAAAAATGACATAAATAA</gDNA_template>
            <first_frame> L  G  F  L  Q  A  A  E  Y  L  *  I  F  S  L  S  S  S  A  E  A  M  :  S  R  R  K  T  R  E  P  K  E  E  T  V  T  L  G  P  A  T  R  E  G  E  L  V  F  G  V  A  H  I  F  A  S  F  N  D  T  F  I  :  H  V  T  D  L  S  G  R  E  T  M  V  R  I  T   : G  G  M  K  V  K  A  D  R  D  E  S  S  P  Y  A  A  M  L  A  A  Q  D  V  S  Q  R  C  K  :  E  L  G  I  N  A  L  H  I  K  L  R  A  T  G  G  N  K  T  K  T  P  G  P  G  A  Q  S  A  L  R  A  L  A  R  S  G  M  K  I  G  R  I   : E  D  V  T  P  I  P  T  D  S  T  R  R  K  G  G  R  R  G  R  R  L  *  R  L  F  L  F  S  A  A  C  C  K  L  E  E  N  I  V  V  E  K  C  S  F  R  Y  L  F  T  F  D  F  *  T  L  C  S  *  A  L  L  V  S  K  P  P  S  F  *  V  C  Q  L  F  E  I  V  K  F  S  *  I  W  F  M  Q  A  N  C  W  I  N  L  Y  S  F  Y  L  H  N  S  :  F  F  L  *  K  E  K  *  H  K  * </first_frame>
            <second_frame>  *  G  F  F  K  L  L  S  I  S  E  F  S  H  Y  Q  A  Q  L  K  P  C :   R  G  E  R  P  G  S  L  R  K  R  L  L  H  L  D  Q  Q  R  G  K  V  N  W  C  S  V  L  H  T  F  L  H  R  S  M  I  H  S  F :   T  L  L  I  C  L  E  E  K  L  W  F  A  L  L  :  V  E  *  R  *  R  L  T  E  M  S  L  L  R  M  L  L  C  L  Q  L  R  M  C  H  S  D  A  R :   N  L  E  L  M  L  F  T  L  S  S  E  L  Q  E  A  T  R  P  R  L  L  V  L  V  P  S  P  L  L  E  L  W  L  V  L  A  *  K  L  D  V  *  :  R  M  L  L  Q  F  P  P  I  V  L  A  E  R  V  V  E  G  E  G  G  C  E  D  S  F  S  F  L  Q  H  V  A  N  W  R  K  I  L  L  S  K  N  A  A  F  D  I  Y  L  H  L  I  S  E  H  S  V  V  E  H  F  W  F  R  N  H  L  H  F  E  F  A  S  F  S  R  *  L  S  S  L  K  F  G  L  C  R  L  I  V  G  *  I  Y  T  L  F  I  F  T  I  L :   F  F  Y  K  K  K  N  D  I  N   </second_frame>
            <third_frame>   R  V  S  S  S  C  *  V  S  L  N  F  L  T  I  K  L  S  *  S  H   : V  E  E  K  D  Q  G  A  *  G  R  D  C  Y  T  W  T  S  N  E  G  R  *  I  G  V  R  C  C  T  H  F  C  I  V  Q  *  Y  I  H   : S  R  Y  *  F  V  W  K  R  N  Y  G  S  H  Y  W :   W  N  E  G  E  G  *  Q  R  *  V  F  S  V  C  C  Y  A  C  S  S  G  C  V  T  A  M  Q   : G  T  W  N  *  C  S  S  H  *  A  P  S  Y  R  R  Q  Q  D  Q  D  S  W  S  W  C  P  V  R  S  *  S  F  G  S  F  W  H  E  N  W  T  Y  R :   G  C  Y  S  N  S  H  R  *  Y  S  Q  K  G  W  *  K  G  K  E  A  V  K  T  L  S  L  F  C  S  M  L  Q  I  G  G  K  Y  C  C  R  K  M  Q  L  S  I  S  I  Y  I  *  F  L  N  T  L  *  L  S  T  F  G  F  E  T  T  F  I  L  S  L  P  A  F  R  D  S  *  V  L  L  N  L  V  Y  A  G  *  L  L  D  K  F  I  L  F  L  S  S  Q  F   : F  F  F  I  K  R  K  M  T  *  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108801" stop="108769"/>
                    <exon start="108640" stop="108521"/>
                    <exon start="108421" stop="108376"/>
                    <exon start="107930" stop="107845"/>
                    <exon start="106834" stop="106705"/>
                    <exon start="106577" stop="106510"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSLSSSAEAMSRRKTREPKEETVTLGPATREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="108834" e_stop="108769"/>
            <exon e_start="108640" e_stop="108521"/>
            <exon e_start="108421" e_stop="108376"/>
            <exon e_start="107930" e_stop="107845"/>
            <exon e_start="106834" e_stop="106705"/>
            <exon e_start="106577" e_stop="106275"/>
            <exon e_start="105975" e_stop="105951"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.008" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.600"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108834" e_stop="108769" e_length="66"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="108640" e_stop="108521" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.008" acc_prob="0.995">
            <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="108421" e_stop="108376" e_length="46"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="107930" e_stop="107845" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="106834" e_stop="106705" e_length="130"/>
          </exon>
          <intron i_serial="5" don_prob="0.971" acc_prob="0.998">
            <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="106577" e_stop="106275" e_length="303"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="106274" i_stop="105976" i_length="299"/>
          </intron>
          <exon e_serial="7" e_score="0.600">
            <gDNA_exon_boundary e_start="105975" e_stop="105951" e_length="25"/>
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            <referenceDNA id="SGN-E279237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108819" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108819" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108818" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106795"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311983" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482151" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108816" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108815" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108814" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564711" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108813" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108809" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108807" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E565887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108804" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564789" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106794"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564348" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108802" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108794" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108789" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108634" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108603" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598303" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108586" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108565" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108559" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588745" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108414" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108395" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106275"/>
              <exon start="105975" stop="105951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203238" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106740" stop="106705"/>
              <exon start="106577" stop="106276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106541" stop="106275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216159" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106534" stop="106275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216401" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG : TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT : CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG : GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG : GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG : AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACA : ACTAGTAAAAACAACTTTTACATGC</gDNA_template>
            <first_frame> L  G  F  L  Q  A  A  E  Y  L  *  I  F  S  L  S  S  S  A  E  A  M  :  S  R  R  K  T  R  E  P  K  E  E  T  V  T  L  G  P  A  T  R  E  G  E  L  V  F  G  V  A  H  I  F  A  S  F  N  D  T  F  I  :  H  V  T  D  L  S  G  R  E  T  M  V  R  I  T   : G  G  M  K  V  K  A  D  R  D  E  S  S  P  Y  A  A  M  L  A  A  Q  D  V  S  Q  R  C  K  :  E  L  G  I  N  A  L  H  I  K  L  R  A  T  G  G  N  K  T  K  T  P  G  P  G  A  Q  S  A  L  R  A  L  A  R  S  G  M  K  I  G  R  I   : E  D  V  T  P  I  P  T  D  S  T  R  R  K  G  G  R  R  G  R  R  L  *  R  L  F  L  F  S  A  A  C  C  K  L  E  E  N  I  V  V  E  K  C  S  F  R  Y  L  F  T  F  D  F  *  T  L  C  S  *  A  L  L  V  S  K  P  P  S  F  *  V  C  Q  L  F  E  I  V  K  F  S  *  I  W  F  M  Q  A  N  C  W  I  N  L  Y  S  F  Y  L  H   : N  *  *  K  Q  L  L  H   </first_frame>
            <second_frame>  *  G  F  F  K  L  L  S  I  S  E  F  S  H  Y  Q  A  Q  L  K  P  C :   R  G  E  R  P  G  S  L  R  K  R  L  L  H  L  D  Q  Q  R  G  K  V  N  W  C  S  V  L  H  T  F  L  H  R  S  M  I  H  S  F :   T  L  L  I  C  L  E  E  K  L  W  F  A  L  L  :  V  E  *  R  *  R  L  T  E  M  S  L  L  R  M  L  L  C  L  Q  L  R  M  C  H  S  D  A  R :   N  L  E  L  M  L  F  T  L  S  S  E  L  Q  E  A  T  R  P  R  L  L  V  L  V  P  S  P  L  L  E  L  W  L  V  L  A  *  K  L  D  V  *  :  R  M  L  L  Q  F  P  P  I  V  L  A  E  R  V  V  E  G  E  G  G  C  E  D  S  F  S  F  L  Q  H  V  A  N  W  R  K  I  L  L  S  K  N  A  A  F  D  I  Y  L  H  L  I  S  E  H  S  V  V  E  H  F  W  F  R  N  H  L  H  F  E  F  A  S  F  S  R  *  L  S  S  L  K  F  G  L  C  R  L  I  V  G  *  I  Y  T  L  F  I  F  T  :  T  S  K  N  N  F  Y  M  </second_frame>
            <third_frame>   R  V  S  S  S  C  *  V  S  L  N  F  L  T  I  K  L  S  *  S  H   : V  E  E  K  D  Q  G  A  *  G  R  D  C  Y  T  W  T  S  N  E  G  R  *  I  G  V  R  C  C  T  H  F  C  I  V  Q  *  Y  I  H   : S  R  Y  *  F  V  W  K  R  N  Y  G  S  H  Y  W :   W  N  E  G  E  G  *  Q  R  *  V  F  S  V  C  C  Y  A  C  S  S  G  C  V  T  A  M  Q   : G  T  W  N  *  C  S  S  H  *  A  P  S  Y  R  R  Q  Q  D  Q  D  S  W  S  W  C  P  V  R  S  *  S  F  G  S  F  W  H  E  N  W  T  Y  R :   G  C  Y  S  N  S  H  R  *  Y  S  Q  K  G  W  *  K  G  K  E  A  V  K  T  L  S  L  F  C  S  M  L  Q  I  G  G  K  Y  C  C  R  K  M  Q  L  S  I  S  I  Y  I  *  F  L  N  T  L  *  L  S  T  F  G  F  E  T  T  F  I  L  S  L  P  A  F  R  D  S  *  V  L  L  N  L  V  Y  A  G  *  L  L  D  K  F  I  L  F  L  S  S  Q :   L  V  K  T  T  F  T  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108801" stop="108769"/>
                    <exon start="108640" stop="108521"/>
                    <exon start="108421" stop="108376"/>
                    <exon start="107930" stop="107845"/>
                    <exon start="106834" stop="106705"/>
                    <exon start="106577" stop="106510"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSLSSSAEAMSRRKTREPKEETVTLGPATREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
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          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106436"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561148" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106568"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108819" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108819" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108818" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106795"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311983" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482151" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108816" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108815" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108814" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564711" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108813" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108809" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108807" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E565887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108804" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564789" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106794"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564348" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108802" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108794" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108789" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108634" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108603" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598303" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108586" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108565" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108414" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106721" stop="106705"/>
              <exon start="106577" stop="106295"/>
              <exon start="105699" stop="105637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355415" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG : TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT : CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG : GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG : GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG : AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTT : GTAACAAATAATGACATGGATAAATTTTTTTTATAAAAAGAAAAATGACATAAATAAACTAAA</gDNA_template>
            <first_frame> L  G  F  L  Q  A  A  E  Y  L  *  I  F  S  L  S  S  S  A  E  A  M  :  S  R  R  K  T  R  E  P  K  E  E  T  V  T  L  G  P  A  T  R  E  G  E  L  V  F  G  V  A  H  I  F  A  S  F  N  D  T  F  I  :  H  V  T  D  L  S  G  R  E  T  M  V  R  I  T   : G  G  M  K  V  K  A  D  R  D  E  S  S  P  Y  A  A  M  L  A  A  Q  D  V  S  Q  R  C  K  :  E  L  G  I  N  A  L  H  I  K  L  R  A  T  G  G  N  K  T  K  T  P  G  P  G  A  Q  S  A  L  R  A  L  A  R  S  G  M  K  I  G  R  I   : E  D  V  T  P  I  P  T  D  S  T  R  R  K  G  G  R  R  G  R  R  L  *  R  L  F  L  F  S  A  A  C  C  K  L  E  E  N  I  V  V  E  K  C  S  F  R  Y  L  F  T  F  D  F  *  T  L  C  S  *  A  L  L  V  S  K  P  P  S  F  *  V  C  Q  L  F  E  I  V  K  F  S  *  I  W  F  M  Q  A  N  C  W  I  N  L :   *  Q  I  M  T  W  I  N  F  F  Y  K  K  K  N  D  I  N  K  L   </first_frame>
            <second_frame>  *  G  F  F  K  L  L  S  I  S  E  F  S  H  Y  Q  A  Q  L  K  P  C :   R  G  E  R  P  G  S  L  R  K  R  L  L  H  L  D  Q  Q  R  G  K  V  N  W  C  S  V  L  H  T  F  L  H  R  S  M  I  H  S  F :   T  L  L  I  C  L  E  E  K  L  W  F  A  L  L  :  V  E  *  R  *  R  L  T  E  M  S  L  L  R  M  L  L  C  L  Q  L  R  M  C  H  S  D  A  R :   N  L  E  L  M  L  F  T  L  S  S  E  L  Q  E  A  T  R  P  R  L  L  V  L  V  P  S  P  L  L  E  L  W  L  V  L  A  *  K  L  D  V  *  :  R  M  L  L  Q  F  P  P  I  V  L  A  E  R  V  V  E  G  E  G  G  C  E  D  S  F  S  F  L  Q  H  V  A  N  W  R  K  I  L  L  S  K  N  A  A  F  D  I  Y  L  H  L  I  S  E  H  S  V  V  E  H  F  W  F  R  N  H  L  H  F  E  F  A  S  F  S  R  *  L  S  S  L  K  F  G  L  C  R  L  I  V  G  *  I   : C  N  K  *  *  H  G  *  I  F  F  I  K  R  K  M  T  *  I  N  *  </second_frame>
            <third_frame>   R  V  S  S  S  C  *  V  S  L  N  F  L  T  I  K  L  S  *  S  H   : V  E  E  K  D  Q  G  A  *  G  R  D  C  Y  T  W  T  S  N  E  G  R  *  I  G  V  R  C  C  T  H  F  C  I  V  Q  *  Y  I  H   : S  R  Y  *  F  V  W  K  R  N  Y  G  S  H  Y  W :   W  N  E  G  E  G  *  Q  R  *  V  F  S  V  C  C  Y  A  C  S  S  G  C  V  T  A  M  Q   : G  T  W  N  *  C  S  S  H  *  A  P  S  Y  R  R  Q  Q  D  Q  D  S  W  S  W  C  P  V  R  S  *  S  F  G  S  F  W  H  E  N  W  T  Y  R :   G  C  Y  S  N  S  H  R  *  Y  S  Q  K  G  W  *  K  G  K  E  A  V  K  T  L  S  L  F  C  S  M  L  Q  I  G  G  K  Y  C  C  R  K  M  Q  L  S  I  S  I  Y  I  *  F  L  N  T  L  *  L  S  T  F  G  F  E  T  T  F  I  L  S  L  P  A  F  R  D  S  *  V  L  L  N  L  V  Y  A  G  *  L  L  D  K  F  :  V  T  N  N  D  M  D  K  F  F  L  *  K  E  K  *  H  K  *  T  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108801" stop="108769"/>
                    <exon start="108640" stop="108521"/>
                    <exon start="108421" stop="108376"/>
                    <exon start="107930" stop="107845"/>
                    <exon start="106834" stop="106705"/>
                    <exon start="106577" stop="106510"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSLSSSAEAMSRRKTREPKEETVTLGPATREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
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          <exon-intron don_prob="0.008" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.256" e_score="1.000"/>
          <exon-only e_score="0.571"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108834" e_stop="108769" e_length="66"/>
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          <intron i_serial="1" don_prob="0.991" acc_prob="1.000">
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          <intron i_serial="2" don_prob="0.008" acc_prob="0.995">
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          <intron i_serial="3" don_prob="0.993" acc_prob="1.000">
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          </intron>
          <exon e_serial="4" e_score="1.000">
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          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="1.000">
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          <intron i_serial="5" don_prob="0.971" acc_prob="0.998">
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          <intron i_serial="6" don_prob="0.000" acc_prob="0.256">
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          </intron>
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          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336882" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108824" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108408"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106436"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561148" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106568"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108819" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108819" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108818" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106795"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311983" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482151" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108815" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108814" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564711" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108813" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108809" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108807" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E565887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108804" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564789" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106794"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564348" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108802" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108794" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108789" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108634" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108603" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598303" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108586" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108565" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108414" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562446" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG : TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT : CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG : GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG : GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG : AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAA : GTAACAAATAATGA</gDNA_template>
            <first_frame> L  G  F  L  Q  A  A  E  Y  L  *  I  F  S  L  S  S  S  A  E  A  M  :  S  R  R  K  T  R  E  P  K  E  E  T  V  T  L  G  P  A  T  R  E  G  E  L  V  F  G  V  A  H  I  F  A  S  F  N  D  T  F  I  :  H  V  T  D  L  S  G  R  E  T  M  V  R  I  T   : G  G  M  K  V  K  A  D  R  D  E  S  S  P  Y  A  A  M  L  A  A  Q  D  V  S  Q  R  C  K  :  E  L  G  I  N  A  L  H  I  K  L  R  A  T  G  G  N  K  T  K  T  P  G  P  G  A  Q  S  A  L  R  A  L  A  R  S  G  M  K  I  G  R  I   : E  D  V  T  P  I  P  T  D  S  T  R  R  K  G  G  R  R  G  R  R  L  *  R  L  F  L  F  S  A  A  C  C  K  L  E  E  N  I  V  V  E  K  C  S  F  R  Y  L  F  T  F  D  F  *  T  L  C  S  *  A  L  L  V  S  K  P  P  S  F  *  V  C  Q  L  F  E  I  V  K  F  S  *  I  W  F  M  Q  A  N  C  W  I   : S  N  K  *  * </first_frame>
            <second_frame>  *  G  F  F  K  L  L  S  I  S  E  F  S  H  Y  Q  A  Q  L  K  P  C :   R  G  E  R  P  G  S  L  R  K  R  L  L  H  L  D  Q  Q  R  G  K  V  N  W  C  S  V  L  H  T  F  L  H  R  S  M  I  H  S  F :   T  L  L  I  C  L  E  E  K  L  W  F  A  L  L  :  V  E  *  R  *  R  L  T  E  M  S  L  L  R  M  L  L  C  L  Q  L  R  M  C  H  S  D  A  R :   N  L  E  L  M  L  F  T  L  S  S  E  L  Q  E  A  T  R  P  R  L  L  V  L  V  P  S  P  L  L  E  L  W  L  V  L  A  *  K  L  D  V  *  :  R  M  L  L  Q  F  P  P  I  V  L  A  E  R  V  V  E  G  E  G  G  C  E  D  S  F  S  F  L  Q  H  V  A  N  W  R  K  I  L  L  S  K  N  A  A  F  D  I  Y  L  H  L  I  S  E  H  S  V  V  E  H  F  W  F  R  N  H  L  H  F  E  F  A  S  F  S  R  *  L  S  S  L  K  F  G  L  C  R  L  I  V  G  *  :  V  T  N  N   </second_frame>
            <third_frame>   R  V  S  S  S  C  *  V  S  L  N  F  L  T  I  K  L  S  *  S  H   : V  E  E  K  D  Q  G  A  *  G  R  D  C  Y  T  W  T  S  N  E  G  R  *  I  G  V  R  C  C  T  H  F  C  I  V  Q  *  Y  I  H   : S  R  Y  *  F  V  W  K  R  N  Y  G  S  H  Y  W :   W  N  E  G  E  G  *  Q  R  *  V  F  S  V  C  C  Y  A  C  S  S  G  C  V  T  A  M  Q   : G  T  W  N  *  C  S  S  H  *  A  P  S  Y  R  R  Q  Q  D  Q  D  S  W  S  W  C  P  V  R  S  *  S  F  G  S  F  W  H  E  N  W  T  Y  R :   G  C  Y  S  N  S  H  R  *  Y  S  Q  K  G  W  *  K  G  K  E  A  V  K  T  L  S  L  F  C  S  M  L  Q  I  G  G  K  Y  C  C  R  K  M  Q  L  S  I  S  I  Y  I  *  F  L  N  T  L  *  L  S  T  F  G  F  E  T  T  F  I  L  S  L  P  A  F  R  D  S  *  V  L  L  N  L  V  Y  A  G  *  L  L  D  K :   *  Q  I  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108801" stop="108769"/>
                    <exon start="108640" stop="108521"/>
                    <exon start="108421" stop="108376"/>
                    <exon start="107930" stop="107845"/>
                    <exon start="106834" stop="106705"/>
                    <exon start="106577" stop="106510"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSLSSSAEAMSRRKTREPKEETVTLGPATREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
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              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108817" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482151" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108815" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108814" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564711" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108813" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108809" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108807" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E565887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108804" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564789" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108803" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106794"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564348" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108802" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108794" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108789" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108634" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108586" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107919" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106329"/>
              <exon start="105659" stop="105642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E597160" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGGGTTTCTTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG : TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT : CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG : GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG : GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG : AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAA : AAAAATGACATAAATAAA</gDNA_template>
            <first_frame> L  G  F  L  Q  A  A  E  Y  L  *  I  F  S  L  S  S  S  A  E  A  M  :  S  R  R  K  T  R  E  P  K  E  E  T  V  T  L  G  P  A  T  R  E  G  E  L  V  F  G  V  A  H  I  F  A  S  F  N  D  T  F  I  :  H  V  T  D  L  S  G  R  E  T  M  V  R  I  T   : G  G  M  K  V  K  A  D  R  D  E  S  S  P  Y  A  A  M  L  A  A  Q  D  V  S  Q  R  C  K  :  E  L  G  I  N  A  L  H  I  K  L  R  A  T  G  G  N  K  T  K  T  P  G  P  G  A  Q  S  A  L  R  A  L  A  R  S  G  M  K  I  G  R  I   : E  D  V  T  P  I  P  T  D  S  T  R  R  K  G  G  R  R  G  R  R  L  *  R  L  F  L  F  S  A  A  C  C  K  L  E  E  N  I  V  V  E  K  C  S  F  R  Y  L  F  T  F  D  F  *  T  L  C  S  *  A  L  L  V  S  K  P  P  S  F  *  V  C  Q  L  F  E  I  V  K  F  S  *   : K  K  *  H  K  *  </first_frame>
            <second_frame>  *  G  F  F  K  L  L  S  I  S  E  F  S  H  Y  Q  A  Q  L  K  P  C :   R  G  E  R  P  G  S  L  R  K  R  L  L  H  L  D  Q  Q  R  G  K  V  N  W  C  S  V  L  H  T  F  L  H  R  S  M  I  H  S  F :   T  L  L  I  C  L  E  E  K  L  W  F  A  L  L  :  V  E  *  R  *  R  L  T  E  M  S  L  L  R  M  L  L  C  L  Q  L  R  M  C  H  S  D  A  R :   N  L  E  L  M  L  F  T  L  S  S  E  L  Q  E  A  T  R  P  R  L  L  V  L  V  P  S  P  L  L  E  L  W  L  V  L  A  *  K  L  D  V  *  :  R  M  L  L  Q  F  P  P  I  V  L  A  E  R  V  V  E  G  E  G  G  C  E  D  S  F  S  F  L  Q  H  V  A  N  W  R  K  I  L  L  S  K  N  A  A  F  D  I  Y  L  H  L  I  S  E  H  S  V  V  E  H  F  W  F  R  N  H  L  H  F  E  F  A  S  F  S  R  *  L  S  S  L  K  :  K  N  D  I  N  K </second_frame>
            <third_frame>   R  V  S  S  S  C  *  V  S  L  N  F  L  T  I  K  L  S  *  S  H   : V  E  E  K  D  Q  G  A  *  G  R  D  C  Y  T  W  T  S  N  E  G  R  *  I  G  V  R  C  C  T  H  F  C  I  V  Q  *  Y  I  H   : S  R  Y  *  F  V  W  K  R  N  Y  G  S  H  Y  W :   W  N  E  G  E  G  *  Q  R  *  V  F  S  V  C  C  Y  A  C  S  S  G  C  V  T  A  M  Q   : G  T  W  N  *  C  S  S  H  *  A  P  S  Y  R  R  Q  Q  D  Q  D  S  W  S  W  C  P  V  R  S  *  S  F  G  S  F  W  H  E  N  W  T  Y  R :   G  C  Y  S  N  S  H  R  *  Y  S  Q  K  G  W  *  K  G  K  E  A  V  K  T  L  S  L  F  C  S  M  L  Q  I  G  G  K  Y  C  C  R  K  M  Q  L  S  I  S  I  Y  I  *  F  L  N  T  L  *  L  S  T  F  G  F  E  T  T  F  I  L  S  L  P  A  F  R  D  S  *  V  L  L  K :   K  M  T  *  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108801" stop="108769"/>
                    <exon start="108640" stop="108521"/>
                    <exon start="108421" stop="108376"/>
                    <exon start="107930" stop="107845"/>
                    <exon start="106834" stop="106705"/>
                    <exon start="106577" stop="106510"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSLSSSAEAMSRRKTREPKEETVTLGPATREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="108694" e_stop="108521"/>
            <exon e_start="108421" e_stop="108376"/>
            <exon e_start="107930" e_stop="107845"/>
            <exon e_start="106834" e_stop="106705"/>
            <exon e_start="106577" e_stop="106239"/>
            <exon e_start="105699" e_stop="105689"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.008" acc_prob="0.995" e_score="0.989"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.256" e_score="1.000"/>
          <exon-only e_score="0.636"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="108694" e_stop="108521" e_length="174"/>
          </exon>
          <intron i_serial="1" don_prob="0.008" acc_prob="0.995">
            <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="108421" e_stop="108376" e_length="46"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108375" i_stop="107931" i_length="445"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107930" e_stop="107845" e_length="86"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="106834" e_stop="106705" e_length="130"/>
          </exon>
          <intron i_serial="4" don_prob="0.971" acc_prob="0.998">
            <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="106577" e_stop="106239" e_length="339"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.256">
            <gDNA_intron_boundary i_start="106238" i_stop="105700" i_length="539"/>
          </intron>
          <exon e_serial="6" e_score="0.636">
            <gDNA_exon_boundary e_start="105699" e_stop="105689" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108694" stop="108521"/>
              <exon start="108421" stop="108405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108641" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348010" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108634" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108603" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598303" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108587" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108586" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108575" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252705" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108565" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108563" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302621" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108559" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588745" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108556" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251038" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108542" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284928" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108414" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108405" stop="108376"/>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250400" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107902" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106239"/>
              <exon start="105699" stop="105689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106786" stop="106705"/>
              <exon start="106577" stop="106239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106740" stop="106705"/>
              <exon start="106577" stop="106276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106541" stop="106275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216159" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106534" stop="106275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216401" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="8" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGATTAATTTGAATTGAAAAACTGTATGTTCGATGAAATTGTTTGTTTGTAGTCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT : CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG : GTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG : GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG : AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT : GTAACAAATAA</gDNA_template>
            <first_frame> F  D  *  F  E  L  K  N  C  M  F  D  E  I  V  C  L  *  S  R  R  K  T  R  E  P  K  E  E  T  V  T  L  G  P  A  T  R  E  G  E  L  V  F  G  V  A  H  I  F  A  S  F  N  D  T  F  I  :  H  V  T  D  L  S  G  R  E  T  M  V  R  I  T   : G  G  M  K  V  K  A  D  R  D  E  S  S  P  Y  A  A  M  L  A  A  Q  D  V  S  Q  R  C  K  :  E  L  G  I  N  A  L  H  I  K  L  R  A  T  G  G  N  K  T  K  T  P  G  P  G  A  Q  S  A  L  R  A  L  A  R  S  G  M  K  I  G  R  I   : E  D  V  T  P  I  P  T  D  S  T  R  R  K  G  G  R  R  G  R  R  L  *  R  L  F  L  F  S  A  A  C  C  K  L  E  E  N  I  V  V  E  K  C  S  F  R  Y  L  F  T  F  D  F  *  T  L  C  S  *  A  L  L  V  S  K  P  P  S  F  *  V  C  Q  L  F  E  I  V  K  F  S  *  I  W  F  M  Q  A  N  C  W  I  N  L  Y  S  F  Y  L  H  N  S  V  S  Y  K  A  L  F  H  Y  G   : C  N  K  * </first_frame>
            <second_frame>  L  I  N  L  N  *  K  T  V  C  S  M  K  L  F  V  C  S  R  G  E  R  P  G  S  L  R  K  R  L  L  H  L  D  Q  Q  R  G  K  V  N  W  C  S  V  L  H  T  F  L  H  R  S  M  I  H  S  F :   T  L  L  I  C  L  E  E  K  L  W  F  A  L  L  :  V  E  *  R  *  R  L  T  E  M  S  L  L  R  M  L  L  C  L  Q  L  R  M  C  H  S  D  A  R :   N  L  E  L  M  L  F  T  L  S  S  E  L  Q  E  A  T  R  P  R  L  L  V  L  V  P  S  P  L  L  E  L  W  L  V  L  A  *  K  L  D  V  *  :  R  M  L  L  Q  F  P  P  I  V  L  A  E  R  V  V  E  G  E  G  G  C  E  D  S  F  S  F  L  Q  H  V  A  N  W  R  K  I  L  L  S  K  N  A  A  F  D  I  Y  L  H  L  I  S  E  H  S  V  V  E  H  F  W  F  R  N  H  L  H  F  E  F  A  S  F  S  R  *  L  S  S  L  K  F  G  L  C  R  L  I  V  G  *  I  Y  T  L  F  I  F  T  I  L  L  V  I  K  L  Y  F  I  M  D  :  V  T  N   </second_frame>
            <third_frame>   *  L  I  *  I  E  K  L  Y  V  R  *  N  C  L  F  V  V  E  E  K  D  Q  G  A  *  G  R  D  C  Y  T  W  T  S  N  E  G  R  *  I  G  V  R  C  C  T  H  F  C  I  V  Q  *  Y  I  H   : S  R  Y  *  F  V  W  K  R  N  Y  G  S  H  Y  W :   W  N  E  G  E  G  *  Q  R  *  V  F  S  V  C  C  Y  A  C  S  S  G  C  V  T  A  M  Q   : G  T  W  N  *  C  S  S  H  *  A  P  S  Y  R  R  Q  Q  D  Q  D  S  W  S  W  C  P  V  R  S  *  S  F  G  S  F  W  H  E  N  W  T  Y  R :   G  C  Y  S  N  S  H  R  *  Y  S  Q  K  G  W  *  K  G  K  E  A  V  K  T  L  S  L  F  C  S  M  L  Q  I  G  G  K  Y  C  C  R  K  M  Q  L  S  I  S  I  Y  I  *  F  L  N  T  L  *  L  S  T  F  G  F  E  T  T  F  I  L  S  L  P  A  F  R  D  S  *  V  L  L  N  L  V  Y  A  G  *  L  L  D  K  F  I  L  F  L  S  S  Q  F  C  *  L  *  S  F  I  S  L  W  M :   *  Q  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108640" stop="108521"/>
                    <exon start="108421" stop="108376"/>
                    <exon start="107930" stop="107845"/>
                    <exon start="106834" stop="106705"/>
                    <exon start="106577" stop="106510"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>447</number_coding_nucleotides>
                  <number_encoded_amino_acids>149</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRRKTREPKEETVTLGPATREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="9">
          <exon_coordinates>
            <exon e_start="107935" e_stop="107845"/>
            <exon e_start="106834" e_stop="106705"/>
            <exon e_start="106577" e_stop="106239"/>
            <exon e_start="105699" e_stop="105689"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="0.978"/>
          <exon-intron don_prob="0.971" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.256" e_score="1.000"/>
          <exon-only e_score="0.636"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="107935" e_stop="107845" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="107844" i_stop="106835" i_length="1010"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="106834" e_stop="106705" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.971" acc_prob="0.998">
            <gDNA_intron_boundary i_start="106704" i_stop="106578" i_length="127"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="106577" e_stop="106239" e_length="339"/>
          </exon>
          <intron i_serial="3" don_prob="0.900" acc_prob="0.256">
            <gDNA_intron_boundary i_start="106238" i_stop="105700" i_length="539"/>
          </intron>
          <exon e_serial="4" e_score="0.636">
            <gDNA_exon_boundary e_start="105699" e_stop="105689" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107935" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282245" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107934" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107930" stop="107845"/>
              <exon start="106834" stop="106771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107902" stop="107845"/>
              <exon start="106834" stop="106705"/>
              <exon start="106577" stop="106239"/>
              <exon start="105699" stop="105689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106786" stop="106705"/>
              <exon start="106577" stop="106239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106740" stop="106705"/>
              <exon start="106577" stop="106276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106541" stop="106275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216159" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106534" stop="106275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216401" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="9" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCTCCGTATGCTGCTATGCTTGCAGCTCAGGATGTGTCACAGCGATGCAAG : GAACTTGGAATTAATGCTCTTCACATTAAGCTCCGAGCTACAGGAGGCAACAAGACCAAGACTCCTGGTCCTGGTGCCCAGTCCGCTCTTAGAGCTTTGGCTCGTTCTGGCATGAAAATTGGACGTATAG : AGGATGTTACTCCAATTCCCACCGATAGTACTCGCAGAAAGGGTGGTAGAAGGGGAAGGAGGCTGTGAAGACTCTTTCTCTTTTCTGCAGCATGTTGCAAATTGGAGGAAAATATTGTTGTCGAAAAATGCAGCTTTCGATATCTATTTACATTTGATTTCTGAACACTCTGTAGTTGAGCACTTTTGGTTTCGAAACCACCTTCATTTTGAGTTTGCCAGCTTTTCGAGATAGTTAAGTTCTCTTAAATTTGGTTTATGCAGGCTAATTGTTGGATAAATTTATACTCTTTTTATCTTCACAATTCTGTTAGTTATAAAGCTTTATTTCATTATGGAT : GTAACAAATAA</gDNA_template>
            <first_frame> C  R  W  N  E  G  E  G  *  Q  R  *  V  F  S  V  C  C  Y  A  C  S  S  G  C  V  T  A  M  Q   : G  T  W  N  *  C  S  S  H  *  A  P  S  Y  R  R  Q  Q  D  Q  D  S  W  S  W  C  P  V  R  S  *  S  F  G  S  F  W  H  E  N  W  T  Y  R :   G  C  Y  S  N  S  H  R  *  Y  S  Q  K  G  W  *  K  G  K  E  A  V  K  T  L  S  L  F  C  S  M  L  Q  I  G  G  K  Y  C  C  R  K  M  Q  L  S  I  S  I  Y  I  *  F  L  N  T  L  *  L  S  T  F  G  F  E  T  T  F  I  L  S  L  P  A  F  R  D  S  *  V  L  L  N  L  V  Y  A  G  *  L  L  D  K  F  I  L  F  L  S  S  Q  F  C  *  L  *  S  F  I  S  L  W  M :   *  Q  I  </first_frame>
            <second_frame>  A  G  G  M  K  V  K  A  D  R  D  E  S  S  P  Y  A  A  M  L  A  A  Q  D  V  S  Q  R  C  K  :  E  L  G  I  N  A  L  H  I  K  L  R  A  T  G  G  N  K  T  K  T  P  G  P  G  A  Q  S  A  L  R  A  L  A  R  S  G  M  K  I  G  R  I   : E  D  V  T  P  I  P  T  D  S  T  R  R  K  G  G  R  R  G  R  R  L  *  R  L  F  L  F  S  A  A  C  C  K  L  E  E  N  I  V  V  E  K  C  S  F  R  Y  L  F  T  F  D  F  *  T  L  C  S  *  A  L  L  V  S  K  P  P  S  F  *  V  C  Q  L  F  E  I  V  K  F  S  *  I  W  F  M  Q  A  N  C  W  I  N  L  Y  S  F  Y  L  H  N  S  V  S  Y  K  A  L  F  H  Y  G   : C  N  K  * </second_frame>
            <third_frame>   Q  V  E  *  R  *  R  L  T  E  M  S  L  L  R  M  L  L  C  L  Q  L  R  M  C  H  S  D  A  R :   N  L  E  L  M  L  F  T  L  S  S  E  L  Q  E  A  T  R  P  R  L  L  V  L  V  P  S  P  L  L  E  L  W  L  V  L  A  *  K  L  D  V  *  :  R  M  L  L  Q  F  P  P  I  V  L  A  E  R  V  V  E  G  E  G  G  C  E  D  S  F  S  F  L  Q  H  V  A  N  W  R  K  I  L  L  S  K  N  A  A  F  D  I  Y  L  H  L  I  S  E  H  S  V  V  E  H  F  W  F  R  N  H  L  H  F  E  F  A  S  F  S  R  *  L  S  S  L  K  F  G  L  C  R  L  I  V  G  *  I  Y  T  L  F  I  F  T  I  L  L  V  I  K  L  Y  F  I  M  D  :  V  T  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="9" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107934" stop="107845"/>
                    <exon start="106834" stop="106705"/>
                    <exon start="106577" stop="106510"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AGGMKVKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="9" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106577" stop="106344"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RMLLQFPPIVLAERVVEGEGGCEDSFSFLQHVANWRKILLSKNAAFDIYLHLISEHSVVEHFWFRNHLHFEFASFSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="10">
          <exon_coordinates>
            <exon e_start="108824" e_stop="108769"/>
            <exon e_start="108640" e_stop="108521"/>
            <exon e_start="108421" e_stop="108376"/>
            <exon e_start="108314" e_stop="108306"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.008" acc_prob="0.995" e_score="0.991"/>
          <exon-intron don_prob="0.993" acc_prob="0.664" e_score="0.957"/>
          <exon-only e_score="0.556"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108824" e_stop="108769" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108768" i_stop="108641" i_length="128"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="108640" e_stop="108521" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.008" acc_prob="0.995">
            <gDNA_intron_boundary i_start="108520" i_stop="108422" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="0.957">
            <gDNA_exon_boundary e_start="108421" e_stop="108376" e_length="46"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.664">
            <gDNA_intron_boundary i_start="108375" i_stop="108315" i_length="61"/>
          </intron>
          <exon e_serial="4" e_score="0.556">
            <gDNA_exon_boundary e_start="108314" e_stop="108306" e_length="9"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108824" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108408"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108823" stop="108769"/>
              <exon start="108640" stop="108521"/>
              <exon start="108421" stop="108401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108635" stop="108521"/>
              <exon start="108421" stop="108376"/>
              <exon start="108314" stop="108306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445242" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="10" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCAAGCTGCTGAGTATCTCTGAATTTTCTCACTATCAAGCTCAGCTGAAGCCATG : TCGAGGAGAAAGACCAGGGAGCCTAAGGAAGAGACTGTTACACTTGGACCAGCAACGAGGGAAGGTGAATTGGTGTTCGGTGTTGCACACATTTTTGCATCGTTCAATGATACATTCATT : CACGTTACTGATTTGTCTGGAAGAGAAACTATGGTTCGCATTACTG : CTGGTAGCA</gDNA_template>
            <first_frame> F  K  L  L  S  I  S  E  F  S  H  Y  Q  A  Q  L  K  P  C :   R  G  E  R  P  G  S  L  R  K  R  L  L  H  L  D  Q  Q  R  G  K  V  N  W  C  S  V  L  H  T  F  L  H  R  S  M  I  H  S  F :   T  L  L  I  C  L  E  E  K  L  W  F  A  L  L  :  L  V  A </first_frame>
            <second_frame>  S  S  C  *  V  S  L  N  F  L  T  I  K  L  S  *  S  H   : V  E  E  K  D  Q  G  A  *  G  R  D  C  Y  T  W  T  S  N  E  G  R  *  I  G  V  R  C  C  T  H  F  C  I  V  Q  *  Y  I  H   : S  R  Y  *  F  V  W  K  R  N  Y  G  S  H  Y  C :   W  *   </second_frame>
            <third_frame>   Q  A  A  E  Y  L  *  I  F  S  L  S  S  S  A  E  A  M  :  S  R  R  K  T  R  E  P  K  E  E  T  V  T  L  G  P  A  T  R  E  G  E  L  V  F  G  V  A  H  I  F  A  S  F  N  D  T  F  I  :  H  V  T  D  L  S  G  R  E  T  M  V  R  I  T   : A  G  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="10" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108824" stop="108769"/>
                    <exon start="108640" stop="108521"/>
                    <exon start="108421" stop="108376"/>
                    <exon start="108314" stop="108306"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FKLLSISEFSHYQAQLKPCRGERPGSLRKRLLHLDQQRGKVNWCSVLHTFLHRSMIHSFTLLICLEEKLWFALLLVA</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="27" AGS_serial="10" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108801" stop="108769"/>
                    <exon start="108640" stop="108521"/>
                    <exon start="108421" stop="108376"/>
                    <exon start="108314" stop="108307"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSLSSSAEAMSRRKTREPKEETVTLGPATREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITAGS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="28" PGL_strand="+" PGL_start="105639" PGL_stop="106552"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105639" e_stop="105665"/>
            <exon e_start="106292" e_stop="106520"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.704"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.704">
            <gDNA_exon_boundary e_start="105639" e_stop="105665" e_length="27"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="105666" i_stop="106291" i_length="626"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="106292" e_stop="106520" e_length="229"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105639" stop="105665"/>
              <exon start="106292" stop="106520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301654" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGTTTATTTATGTCATTTTTCTTTTT : TATAAATTTATCCAACAATTAGCCTGCATAAACCAAATTTAAGAGAACTTAACTATCTCGAAAAGCTGGCAAACTCAAAATGAAGGTGGTTTCGAAACCAAAAGTGCTCAACTACAGAGTGTTCAGAAATCAAATGTAAATAGATATCGAAAGCTGCATTTTTCGACAACAATATTTTCCTCCAATTTGCAACATGCTGCAGAAAAGAGAAAGAGTCTTCACAGCCTCC</gDNA_template>
            <first_frame> *  F  I  Y  V  I  F  L  F  :  Y  K  F  I  Q  Q  L  A  C  I  N  Q  I  *  E  N  L  T  I  S  K  S  W  Q  T  Q  N  E  G  G  F  E  T  K  S  A  Q  L  Q  S  V  Q  K  S  N  V  N  R  Y  R  K  L  H  F  S  T  T  I  F  S  S  N  L  Q  H  A  A  E  K  R  K  S  L  H  S  L  </first_frame>
            <second_frame>  S  L  F  M  S  F  F  F  F :   I  N  L  S  N  N  *  P  A  *  T  K  F  K  R  T  *  L  S  R  K  A  G  K  L  K  M  K  V  V  S  K  P  K  V  L  N  Y  R  V  F  R  N  Q  M  *  I  D  I  E  S  C  I  F  R  Q  Q  Y  F  P  P  I  C  N  M  L  Q  K  R  E  R  V  F  T  A  S </second_frame>
            <third_frame>   V  Y  L  C  H  F  S  F   : L  *  I  Y  P  T  I  S  L  H  K  P  N  L  R  E  L  N  Y  L  E  K  L  A  N  S  K  *  R  W  F  R  N  Q  K  C  S  T  T  E  C  S  E  I  K  C  K  *  I  S  K  A  A  F  F  D  N  N  I  F  L  Q  F  A  T  C  C  R  K  E  K  E  S  S  Q  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0168F14.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="105641" e_stop="105665"/>
            <exon e_start="106272" e_stop="106552"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.720"/>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.720">
            <gDNA_exon_boundary e_start="105641" e_stop="105665" e_length="25"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="105666" i_stop="106271" i_length="606"/>
          </intron>
          <exon e_serial="2" e_score="0.922">
            <gDNA_exon_boundary e_start="106272" e_stop="106552" e_length="281"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105641" stop="105665"/>
              <exon start="106272" stop="106552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224691" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTATTTATGTCATTTTTCTTTTT : AATTGTGAAGATAAAAAGAGTATAAATTTATCCAACAATTAGCCTGCATAAACCAAATTTAAGAGAACTTAACTATCTCGAAAAGCTGGCAAACTCAAAATGAAGGTGGTTTCGAAACCAAAAGTGCTCAACTACAGAGTGTTCAGAAATCAAATGTAAATAGATATCGAAAGCTGCATTTTTCGACAACAATATTTTCCTCCAATTTGCAACATGCTGCAGAAAAGAGAAAGAGTCTTCACAGCCTCCTTCCCCTTCTACCACCCTTTCTGCGAGTACTA</gDNA_template>
            <first_frame> V  Y  L  C  H  F  S  F   : *  L  *  R  *  K  E  Y  K  F  I  Q  Q  L  A  C  I  N  Q  I  *  E  N  L  T  I  S  K  S  W  Q  T  Q  N  E  G  G  F  E  T  K  S  A  Q  L  Q  S  V  Q  K  S  N  V  N  R  Y  R  K  L  H  F  S  T  T  I  F  S  S  N  L  Q  H  A  A  E  K  R  K  S  L  H  S  L  L  P  L  L  P  P  F  L  R  V  L </first_frame>
            <second_frame>  F  I  Y  V  I  F  L  F  :  N  C  E  D  K  K  S  I  N  L  S  N  N  *  P  A  *  T  K  F  K  R  T  *  L  S  R  K  A  G  K  L  K  M  K  V  V  S  K  P  K  V  L  N  Y  R  V  F  R  N  Q  M  *  I  D  I  E  S  C  I  F  R  Q  Q  Y  F  P  P  I  C  N  M  L  Q  K  R  E  R  V  F  T  A  S  F  P  F  Y  H  P  F  C  E  Y   </second_frame>
            <third_frame>   L  F  M  S  F  F  F  L :   I  V  K  I  K  R  V  *  I  Y  P  T  I  S  L  H  K  P  N  L  R  E  L  N  Y  L  E  K  L  A  N  S  K  *  R  W  F  R  N  Q  K  C  S  T  T  E  C  S  E  I  K  C  K  *  I  S  K  A  A  F  F  D  N  N  I  F  L  Q  F  A  T  C  C  R  K  E  K  E  S  S  Q  P  P  S  P  S  T  T  L  S  A  S  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="+"/>
                <serials PGL_serial="28" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106334" stop="106552"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENLTISKSWQTQNEGGFETKSAQLQSVQKSNVNRYRKLHFSTTIFSSNLQHAAEKRKSLHSLLPLLPPFLRVL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="29" PGL_strand="-" PGL_start="111803" PGL_stop="109715"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111293" e_stop="111205"/>
            <exon e_start="111060" e_stop="110927"/>
            <exon e_start="110512" e_stop="110329"/>
            <exon e_start="109731" e_stop="109715"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.949" acc_prob="0.996" e_score="0.989"/>
          <exon-intron don_prob="0.996" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.647"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="111293" e_stop="111205" e_length="89"/>
          </exon>
          <intron i_serial="1" don_prob="0.949" acc_prob="0.996">
            <gDNA_intron_boundary i_start="111204" i_stop="111061" i_length="144"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="111060" e_stop="110927" e_length="134"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.989">
            <gDNA_intron_boundary i_start="110926" i_stop="110513" i_length="414"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="110512" e_stop="110329" e_length="184"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="110328" i_stop="109732" i_length="597"/>
          </intron>
          <exon e_serial="4" e_score="0.647">
            <gDNA_exon_boundary e_start="109731" e_stop="109715" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111293" stop="111205"/>
              <exon start="111060" stop="110927"/>
              <exon start="110512" stop="110329"/>
              <exon start="109731" stop="109715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238878" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111021" stop="110927"/>
              <exon start="110512" stop="110329"/>
              <exon start="109731" stop="109715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239377" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="29" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTGGGAGTCATCTCAGCCCTCATGCTAATAGAAGCTAACAATGTAGTCCAACAAGAGAAGAAAAAGTGCAAATATTGCTATGGAAGTG : GGTACTTGGCATGTGCACGATGTTCAGCAAGCGGTAAATGCCTCTATACTGAACCAATTTCAGTGAATGGTTCTTATCAATCGTTGCGTGCACCAACTCTTAAAAGATGTGCGAATTGCTCCGGGACTGGAAAG : GTAATGTGCCCTACATGTCTGTGTACTGGGATGGTGATGGCAAGTGAACATGACCTTCGAATAGATCCATTTGATTAAGTACAAATTCTCATTTTGTAACTTATATTCATACAAAAAATAATTGGTCATTTTGGTTTTGTTATAAGCATAGTTATTATATATAGAATATCCTTTGGTTATGAAG : GTGAAAAAAGAAAGTAA</gDNA_template>
            <first_frame> S  G  S  H  L  S  P  H  A  N  R  S  *  Q  C  S  P  T  R  E  E  K  V  Q  I  L  L  W  K  W :   V  L  G  M  C  T  M  F  S  K  R  *  M  P  L  Y  *  T  N  F  S  E  W  F  L  S  I  V  A  C  T  N  S  *  K  M  C  E  L  L  R  D  W  K   : G  N  V  P  Y  M  S  V  Y  W  D  G  D  G  K  *  T  *  P  S  N  R  S  I  *  L  S  T  N  S  H  F  V  T  Y  I  H  T  K  N  N  W  S  F  W  F  C  Y  K  H  S  Y  Y  I  *  N  I  L  W  L  *  R :   *  K  K  K  V  </first_frame>
            <second_frame>  V  G  V  I  S  A  L  M  L  I  E  A  N  N  V  V  Q  Q  E  K  K  K  C  K  Y  C  Y  G  S   : G  Y  L  A  C  A  R  C  S  A  S  G  K  C  L  Y  T  E  P  I  S  V  N  G  S  Y  Q  S  L  R  A  P  T  L  K  R  C  A  N  C  S  G  T  G  K  :  V  M  C  P  T  C  L  C  T  G  M  V  M  A  S  E  H  D  L  R  I  D  P  F  D  *  V  Q  I  L  I  L  *  L  I  F  I  Q  K  I  I  G  H  F  G  F  V  I  S  I  V  I  I  Y  R  I  S  F  G  Y  E   : G  E  K  R  K  * </second_frame>
            <third_frame>   W  E  S  S  Q  P  S  C  *  *  K  L  T  M  *  S  N  K  R  R  K  S  A  N  I  A  M  E  V  :  G  T  W  H  V  H  D  V  Q  Q  A  V  N  A  S  I  L  N  Q  F  Q  *  M  V  L  I  N  R  C  V  H  Q  L  L  K  D  V  R  I  A  P  G  L  E  R :   *  C  A  L  H  V  C  V  L  G  W  *  W  Q  V  N  M  T  F  E  *  I  H  L  I  K  Y  K  F  S  F  C  N  L  Y  S  Y  K  K  *  L  V  I  L  V  L  L  *  A  *  L  L  Y  I  E  Y  P  L  V  M  K  :  V  K  K  E  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="29" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111292" stop="111205"/>
                    <exon start="111060" stop="110927"/>
                    <exon start="110512" stop="110435"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGVISALMLIEANNVVQQEKKKCKYCYGSGYLACARCSASGKCLYTEPISVNGSYQSLRAPTLKRCANCSGTGKVMCPTCLCTGMVMASEHDLRIDPFD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="111803" e_stop="111755"/>
            <exon e_start="111619" e_stop="111543"/>
            <exon e_start="111332" e_stop="111205"/>
            <exon e_start="111060" e_stop="110782"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.477" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="111803" e_stop="111755" e_length="49"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="111754" i_stop="111620" i_length="135"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="111619" e_stop="111543" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.477">
            <gDNA_intron_boundary i_start="111542" i_stop="111333" i_length="210"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="111332" e_stop="111205" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.949" acc_prob="0.996">
            <gDNA_intron_boundary i_start="111204" i_stop="111061" i_length="144"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="111060" e_stop="110782" e_length="279"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111803" stop="111755"/>
              <exon start="111619" stop="111543"/>
              <exon start="111332" stop="111205"/>
              <exon start="111060" stop="110782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="29" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCATTTATAGCTGGGATTATGGTCTTCGGTGGATTACTTGCCCCAGTA : CTTGAGCTGAAATTAGGTCTAGGAGGCACCTCATACGAAGATTTTATACGTAACATGCATTTGCCTATGCAATTGAG : CCAGGTCGACCCCATAGTGGCGTCCTTTTCAGGCGGGGCAGTGGGAGTCATCTCAGCCCTCATGCTAATAGAAGCTAACAATGTAGTCCAACAAGAGAAGAAAAAGTGCAAATATTGCTATGGAAGTG : GGTACTTGGCATGTGCACGATGTTCAGCAAGCGGTAAATGCCTCTATACTGAACCAATTTCAGTGAATGGTTCTTATCAATCGTTGCGTGCACCAACTCTTAAAAGATGTGCGAATTGCTCCGGGACTGGAAAGGTATGAAACATGATCATCTCCCTACTTCATGCACTCAACAGTCATATTATATCAGTTCAATAAGTAGTAACTTTACAAGAAAAAACAAATATCTGTGTCTGTTACAATCCGTCCCATAGTCGAGCATCTCAAAAATGTGTGACCG</gDNA_template>
            <first_frame> F  I  Y  S  W  D  Y  G  L  R  W  I  T  C  P  S   : T  *  A  E  I  R  S  R  R  H  L  I  R  R  F  Y  T  *  H  A  F  A  Y  A  I  E  :  P  G  R  P  H  S  G  V  L  F  R  R  G  S  G  S  H  L  S  P  H  A  N  R  S  *  Q  C  S  P  T  R  E  E  K  V  Q  I  L  L  W  K  W :   V  L  G  M  C  T  M  F  S  K  R  *  M  P  L  Y  *  T  N  F  S  E  W  F  L  S  I  V  A  C  T  N  S  *  K  M  C  E  L  L  R  D  W  K  G  M  K  H  D  H  L  P  T  S  C  T  Q  Q  S  Y  Y  I  S  S  I  S  S  N  F  T  R  K  N  K  Y  L  C  L  L  Q  S  V  P  *  S  S  I  S  K  M  C  D   </first_frame>
            <second_frame>  S  F  I  A  G  I  M  V  F  G  G  L  L  A  P  V  :  L  E  L  K  L  G  L  G  G  T  S  Y  E  D  F  I  R  N  M  H  L  P  M  Q  L  S :   Q  V  D  P  I  V  A  S  F  S  G  G  A  V  G  V  I  S  A  L  M  L  I  E  A  N  N  V  V  Q  Q  E  K  K  K  C  K  Y  C  Y  G  S   : G  Y  L  A  C  A  R  C  S  A  S  G  K  C  L  Y  T  E  P  I  S  V  N  G  S  Y  Q  S  L  R  A  P  T  L  K  R  C  A  N  C  S  G  T  G  K  V  *  N  M  I  I  S  L  L  H  A  L  N  S  H  I  I  S  V  Q  *  V  V  T  L  Q  E  K  T  N  I  C  V  C  Y  N  P  S  H  S  R  A  S  Q  K  C  V  T  </second_frame>
            <third_frame>   H  L  *  L  G  L  W  S  S  V  D  Y  L  P  Q  Y :   L  S  *  N  *  V  *  E  A  P  H  T  K  I  L  Y  V  T  C  I  C  L  C  N  *   : A  R  S  T  P  *  W  R  P  F  Q  A  G  Q  W  E  S  S  Q  P  S  C  *  *  K  L  T  M  *  S  N  K  R  R  K  S  A  N  I  A  M  E  V  :  G  T  W  H  V  H  D  V  Q  Q  A  V  N  A  S  I  L  N  Q  F  Q  *  M  V  L  I  N  R  C  V  H  Q  L  L  K  D  V  R  I  A  P  G  L  E  R  Y  E  T  *  S  S  P  Y  F  M  H  S  T  V  I  L  Y  Q  F  N  K  *  *  L  Y  K  K  K  Q  I  S  V  S  V  T  I  R  P  I  V  E  H  L  K  N  V  *  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0168F14.2" strand="-"/>
                <serials PGL_serial="29" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111802" stop="111755"/>
                    <exon start="111619" stop="111543"/>
                    <exon start="111332" stop="111205"/>
                    <exon start="111060" stop="110921"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>390</number_coding_nucleotides>
                  <number_encoded_amino_acids>130</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFIAGIMVFGGLLAPVLELKLGLGGTSYEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEANNVVQQEKKKCKYCYGSGYLACARCSASGKCLYTEPISVNGSYQSLRAPTLKRCANCSGTGKV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 541 chains have been computed
$ 
$ memory statistics:
$ 3252816 bytes spliced alignments in total
$ 324 spliced alignments have been stored
$ 10039 bytes was the average size of a spliced alignment
$ 54416 bytes predicted gene locations in total
$ 29 predicted gene locations have been stored
$ 1876 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 638 backtrace matrices have been allocated
$ 
$ date finished: 2008-02-20 11:29:02
-->
