SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 776 12.6 0.0 8.6 C09SLe0068C01.2 1603 1741 (138707) C Copia00143 Copia (5100) 204 78 1 1216 15.3 0.9 0.0 C09SLe0068C01.2 1878 2106 (138342) C SONATA2 Unknown (0) 253 23 2 295 23.6 4.1 4.1 C09SLe0068C01.2 3017 3113 (137335) + SINE_SO Unknown 64 160 (29) 3 841 17.7 0.4 8.3 C09SLe0068C01.2 5473 5712 (134736) C Unknown00025 Unknown (5843) 465 245 4 482 24.4 1.6 0.8 C09SLe0068C01.2 15616 15739 (124709) C Unknown00043 Unknown (9273) 2051 1927 5 533 23.8 0.0 4.7 C09SLe0068C01.2 16344 16471 (123977) + TS2 Unknown 533 654 (1) 6 242 17.1 0.0 0.0 C09SLe0068C01.2 17420 17454 (122994) + TS Unknown 58 92 (69) 7 991 20.8 6.3 3.1 C09SLe0068C01.2 18331 18553 (121895) + Copia00172 Copia 286 515 (6112) 8 290 24.6 5.6 5.6 C09SLe0068C01.2 37178 37302 (103146) + HAT1_MT Unknown 1 125 (4464) 9 430 15.0 9.4 10.7 C09SLe0068C01.2 37825 37973 (102475) C SONATA1 Unknown (25) 218 72 10 695 17.2 2.5 4.4 C09SLe0068C01.2 38877 39034 (101414) + Unknown00046 Unknown 323 477 (9567) 11 1231 11.8 0.7 5.8 C09SLe0068C01.2 39476 39771 (100677) + Copia00008 Copia 1 5128 (6) 12 289 0.0 0.0 0.0 C09SLe0068C01.2 45991 46042 (94406) + Copia00181 Copia 1814 1865 (371) 13 265 8.1 1.1 0.7 C09SLe0068C01.2 45993 46093 (94355) C STOWAWAY50_OS Unknown (60) 1672 52 14 * 388 14.1 3.2 6.0 C09SLe0068C01.2 49695 49802 (90646) + SONATA2 Unknown 1 163 (90) 15 258 22.9 0.0 1.4 C09SLe0068C01.2 49808 49878 (90570) + SONATA1 Unknown 174 243 (0) 16 343 6.8 2.7 0.0 C09SLe0068C01.2 54217 54289 (86159) + HELITRON7_OS Unknown 1597 1671 (8482) 17 321 8.3 1.4 1.4 C09SLe0068C01.2 54225 54297 (86151) + Copia00181 Copia 1814 1886 (350) 18 * 265 10.0 1.2 3.6 C09SLe0068C01.2 54236 54318 (86130) + Gypsy00019 Gypsy 601 681 (6236) 19 * 752 18.3 0.8 7.4 C09SLe0068C01.2 54333 54574 (85874) + Unknown00025 Unknown 245 470 (5838) 20 470 5.0 0.0 4.8 C09SLe0068C01.2 54580 54642 (85806) + Copia00205 Copia 9998 10057 (199) 21 * 38816 0.2 0.0 0.0 C09SLe0068C01.2 54622 59088 (81360) + Copia00001 Copia 1 6515 (0) 22 3204 1.3 0.2 3.8 C09SLe0068C01.2 58880 59278 (81170) C Copia00037 Copia (2207) 2877 2493 23 * 464 30.2 6.0 0.8 C09SLe0068C01.2 63723 63956 (76492) + TS2 Unknown 405 650 (5) 24 1002 20.5 0.8 1.6 C09SLe0068C01.2 66638 66890 (73558) C SONATA2 Unknown (1) 252 2 25 234 23.5 1.2 1.2 C09SLe0068C01.2 68199 68284 (72164) + TLP2 Unknown 10 95 (211) 26 625 22.8 0.7 1.4 C09SLe0068C01.2 73752 73898 (66550) + Copia00172 Copia 5180 5325 (1302) 27 1176 20.4 4.5 1.4 C09SLe0068C01.2 78502 78789 (61659) C Copia00151 Copia (4959) 5802 5506 28 769 17.1 5.1 7.2 C09SLe0068C01.2 83815 84009 (56439) + Unknown00046 Unknown 1869 2059 (7985) 29 244 26.6 0.0 3.0 C09SLe0068C01.2 89555 89620 (50828) + Copia00089 Copia 3963 4026 (7430) 30 231 23.5 0.0 4.2 C09SLe0068C01.2 91667 91737 (48711) + Unknown00043 Unknown 6984 7051 (4273) 31 2638 6.6 0.5 1.3 C09SLe0068C01.2 94357 94739 (45709) C Gypsy00073 Gypsy (11701) 383 4 32 1229 11.7 1.0 0.5 C09SLe0068C01.2 94908 95104 (45344) C Gypsy00073 Gypsy (0) 12084 11887 33 1766 5.8 1.2 3.6 C09SLe0068C01.2 96020 96268 (44180) C Copia00035 Copia (2978) 1699 1457 34 239 9.7 0.0 0.0 C09SLe0068C01.2 96242 96272 (44176) C Copia00113 Copia (4911) 7495 7465 35 * 225 26.9 1.3 0.0 C09SLe0068C01.2 97928 98005 (42443) + Unknown00030 Unknown 1294 1372 (94) 36 423 26.3 2.1 2.8 C09SLe0068C01.2 98349 98489 (41959) C RTE1_MT Unknown (456) 2699 2560 37 263 26.9 0.0 1.5 C09SLe0068C01.2 103458 103525 (36923) + Copia00172 Copia 5195 5261 (1366) 38 418 21.9 0.0 5.0 C09SLe0068C01.2 106165 106265 (34183) C TS Unknown (8) 153 58 39 327 23.3 5.4 4.3 C09SLe0068C01.2 107875 108022 (32426) + Copia00151 Copia 63 9662 (1099) 40 310 28.3 1.0 2.0 C09SLe0068C01.2 108668 108768 (31680) C ATCOPIA38A_I Unknown (155) 4051 3952 41 289 21.2 0.0 0.0 C09SLe0068C01.2 108899 108964 (31484) C SHACOP9_I_MT Unknown (410) 3992 3927 42 733 17.8 5.9 12.5 C09SLe0068C01.2 109502 109822 (30626) C TORTL1 Unknown (8885) 810 511 43 375 21.2 14.6 3.4 C09SLe0068C01.2 112206 112355 (28093) C TS2 Unknown (4) 2047 533 44 349 24.4 1.0 5.3 C09SLe0068C01.2 112358 112489 (27959) C TS Unknown (10) 2023 60 45 1596 13.6 1.8 0.4 C09SLe0068C01.2 113813 114092 (26356) C Copia00107 Copia (2305) 732 449 46 230 33.0 0.0 0.0 C09SLe0068C01.2 116632 116719 (23729) C ATCOPIA38A_I Unknown (167) 4039 3952 47 286 21.2 0.0 0.0 C09SLe0068C01.2 116850 116915 (23533) C SHACOP9_I_MT Unknown (410) 3992 3927 48 512 3.0 0.0 4.3 C09SLe0068C01.2 117266 117335 (23113) + Copia00205 Copia 9986 10052 (204) 49 * 3127 2.1 0.2 3.5 C09SLe0068C01.2 117281 117677 (22771) C Copia00037 Copia (2208) 2876 2493 50 777 15.8 0.5 10.5 C09SLe0068C01.2 117852 118070 (22378) C Copia00212 Copia (7950) 223 27 51 764 20.6 4.5 10.6 C09SLe0068C01.2 118071 118182 (22266) C TORTL1 Unknown (5) 9690 9380 52 356 33.3 4.8 5.2 C09SLe0068C01.2 121350 121983 (18465) + SHACOP11_I_MT Unknown 1694 2365 (2027) 53 1504 29.8 2.7 2.6 C09SLe0068C01.2 122160 122818 (17630) + SHACOP11_I_MT Unknown 3701 4360 (32) 53 738 26.4 2.3 2.3 C09SLe0068C01.2 126397 126656 (13792) + Copia00125 Copia 3786 4045 (20) 54 293 12.8 4.8 7.1 C09SLe0068C01.2 127969 128052 (12396) + Copia00168 Copia 4561 4642 (14) 55 1234 11.9 1.0 0.5 C09SLe0068C01.2 129879 130072 (10376) + Gypsy00073 Gypsy 11887 12081 (3) 56 375 20.0 2.8 6.2 C09SLe0068C01.2 129945 130088 (10360) C Gypsy00073 Gypsy (11741) 343 205 57 * 2653 5.5 1.0 1.0 C09SLe0068C01.2 130243 130625 (9823) + Gypsy00073 Gypsy 1 383 (11701) 58 404 26.9 1.7 0.9 C09SLe0068C01.2 134101 134216 (6232) C Copia00151 Copia (592) 10169 10053 59 1614 12.7 0.0 0.0 C09SLe0068C01.2 134518 134770 (5678) C SONATA2 Unknown (0) 253 1 60 314 20.4 4.7 3.7 C09SLe0068C01.2 134966 135072 (5376) C Gypsy00163 Gypsy (851) 7896 7789 61 741 20.5 12.9 16.3 C09SLe0068C01.2 138674 139348 (1100) + Unknown00019 Unknown 46 697 (13936) 62 * 2387 14.0 0.0 6.5 C09SLe0068C01.2 138857 139351 (1097) C Copia00110 Copia (508) 13624 13162 63 466 4.9 0.0 1.0 C09SLe0068C01.2 139772 139874 (574) C Gypsy00046 Gypsy (6892) 4179 4078 64 270 6.5 0.2 5.7 C09SLe0068C01.2 139820 139899 (549) C Unknown00037 Unknown (281) 4558 441 65 *