SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 1517 24.1 8.3 3.6 C09SLm0105D02.1 1 578 (136341) + Unknown00016 Unknown 2119 2723 (2258) 1 * 4561 28.5 6.3 6.1 C09SLm0105D02.1 59 3272 (133647) C Unknown00052 Unknown (1377) 3292 72 2 1468 24.0 5.1 4.7 C09SLm0105D02.1 4140 5289 (131630) + Unknown00016 Unknown 1021 2341 (2640) 3 316 27.5 0.0 0.0 C09SLm0105D02.1 5239 5329 (131590) C Unknown00002 Unknown (5508) 4473 4383 4 * 2765 20.1 2.4 1.5 C09SLm0105D02.1 7661 8333 (128586) + Gypsy00177 Gypsy 9261 9939 (366) 5 954 29.5 3.7 4.2 C09SLm0105D02.1 9757 10445 (126474) + Unknown00002 Unknown 663 3396 (2234) 6 286 25.6 7.4 8.6 C09SLm0105D02.1 10743 10917 (126002) + Gypsy00091 Gypsy 7068 7240 (1307) 7 * 891 29.9 8.8 9.0 C09SLm0105D02.1 10771 12277 (124642) + Unknown00054 Unknown 2817 4321 (1170) 8 * 1560 30.9 8.4 4.2 C09SLm0105D02.1 11169 12278 (124641) C Unknown00016 Unknown (1573) 3408 2253 9 710 26.0 9.1 4.7 C09SLm0105D02.1 15042 15577 (121342) + Unknown00002 Unknown 2346 3347 (2269) 10 3193 26.8 1.8 4.2 C09SLm0105D02.1 20400 21603 (115316) + Unknown00025 Unknown 2310 3485 (2823) 11 1147 12.5 3.2 1.1 C09SLm0105D02.1 24119 24304 (112615) C Gypsy00183 Gypsy (1059) 5763 5574 12 * 1623 17.9 3.6 3.6 C09SLm0105D02.1 24168 24532 (112387) + Gypsy00139 Gypsy 412 776 (9315) 13 1308 13.2 0.5 0.0 C09SLm0105D02.1 24494 24697 (112222) C Gypsy00166 Gypsy (336) 7765 7561 14 * 1827 32.2 3.9 5.0 C09SLm0105D02.1 25286 27245 (109674) + ENSUPMET Unknown 3122 6827 (66) 15 1367 3.2 4.5 2.3 C09SLm0105D02.1 30503 30723 (106196) + Gypsy00011 Gypsy 1205 1430 (6582) 16 * 1859 16.7 4.1 2.2 C09SLm0105D02.1 30712 31202 (105717) + Gypsy00011 Gypsy 3029 3528 (4484) 17 3289 8.8 0.5 4.9 C09SLm0105D02.1 31346 31920 (104999) + Gypsy00011 Gypsy 3514 4063 (3949) 17 5387 10.0 2.4 3.6 C09SLm0105D02.1 32099 33012 (103907) + Gypsy00011 Gypsy 4213 5115 (2897) 17 455 24.4 4.2 4.8 C09SLm0105D02.1 34284 34472 (102447) C Gypsy00173 Gypsy (31) 4983 4796 18 2304 18.3 7.3 7.7 C09SLm0105D02.1 34960 35670 (101249) C Gypsy00173 Gypsy (4306) 708 1 19 275 27.7 11.5 2.1 C09SLm0105D02.1 37801 37896 (99023) + Copia00149 Copia 7841 7945 (6538) 20 240 23.3 4.6 1.1 C09SLm0105D02.1 37954 38040 (98879) C Copia00145 Copia (5377) 7042 6953 21 * 1314 4.6 4.5 2.3 C09SLm0105D02.1 38010 38230 (98689) + Gypsy00011 Gypsy 1205 1430 (6582) 22 * 1870 16.7 4.0 2.2 C09SLm0105D02.1 38219 38714 (98205) + Gypsy00011 Gypsy 3029 3533 (4479) 23 3232 9.2 0.5 4.9 C09SLm0105D02.1 38854 39428 (97491) + Gypsy00011 Gypsy 3514 4063 (3949) 23 5572 9.3 2.3 3.4 C09SLm0105D02.1 39608 40523 (96396) + Gypsy00011 Gypsy 4213 5118 (2894) 23 1077 25.7 1.7 3.2 C09SLm0105D02.1 41341 41686 (95233) C Gypsy00100 Gypsy (4421) 1265 925 24 * 1274 21.8 0.6 5.9 C09SLm0105D02.1 41414 41750 (95169) + Gypsy00139 Gypsy 412 730 (9361) 25 2285 19.7 0.6 0.8 C09SLm0105D02.1 42986 43517 (93402) C Gypsy00188 Gypsy (0) 8415 415 26 * 4789 19.4 1.8 0.9 C09SLm0105D02.1 43507 44558 (92361) C Gypsy00080 Gypsy (7594) 2352 1292 27 2253 23.3 1.8 2.3 C09SLm0105D02.1 43970 44628 (92291) + Gypsy00131 Gypsy 1 656 (7577) 28 * 9054 18.9 0.1 0.2 C09SLm0105D02.1 44632 46310 (90609) C Gypsy00202 Gypsy (3342) 11093 9417 29 4219 20.6 1.2 0.7 C09SLm0105D02.1 46309 47162 (89757) C Gypsy00046 Gypsy (2714) 8357 7500 30 * 441 16.5 0.0 3.4 C09SLm0105D02.1 47159 47246 (89673) + ATCOPIA24I Unknown 2733 2817 (1890) 31 * 366 16.7 0.0 0.0 C09SLm0105D02.1 47242 47307 (89612) C CACTA_LP Unknown (9344) 3139 3074 32 * 504 15.3 0.0 0.0 C09SLm0105D02.1 47261 47345 (89574) + ATCOPIA24I Unknown 2733 2817 (1890) 33 382 10.7 0.0 0.0 C09SLm0105D02.1 47329 47384 (89535) C CACTA_LP Unknown (9353) 3130 3075 34 * 333 16.7 0.0 0.0 C09SLm0105D02.1 47347 47406 (89513) + ATCOPIA24I Unknown 2738 2797 (1910) 35 * 864 32.0 2.7 2.7 C09SLm0105D02.1 47392 47974 (88945) + Gypsy00071 Gypsy 3418 4132 (8579) 36 1380 9.0 12.8 0.4 C09SLm0105D02.1 48490 48723 (88196) + Copia00198 Copia 2850 3112 (5244) 37 745 7.8 0.0 0.0 C09SLm0105D02.1 48848 48950 (87969) + Copia00112 Copia 31 133 (8754) 38 2227 20.9 3.5 0.8 C09SLm0105D02.1 49862 50381 (86538) + Copia00198 Copia 2966 3499 (4857) 39 1504 14.9 1.7 2.1 C09SLm0105D02.1 50639 50926 (85993) C Gypsy00141 Gypsy (9150) 287 1 40 * 14907 9.2 0.4 0.1 C09SLm0105D02.1 50687 52920 (83999) + Gypsy00097 Gypsy 1 9510 (570) 41 1299 18.1 6.2 1.0 C09SLm0105D02.1 52921 53210 (83709) C Copia00155 Copia (417) 5085 4781 42 954 12.5 2.7 5.9 C09SLm0105D02.1 53746 53932 (82987) C Unknown00019 Unknown (13928) 705 525 43 * 4336 12.0 1.6 0.3 C09SLm0105D02.1 53915 54608 (82311) + Gypsy00043 Gypsy 610 1312 (12582) 44 245 7.4 5.5 1.8 C09SLm0105D02.1 54769 54823 (82096) C HELITRON7_OS Unknown (3012) 7141 7085 45 443 11.7 0.0 1.3 C09SLm0105D02.1 54964 55041 (81878) C Gypsy00043 Gypsy (13284) 610 534 46 550 16.9 10.0 0.0 C09SLm0105D02.1 55191 55320 (81599) C SONATA2 Unknown (64) 189 47 47 * 652 16.2 0.6 6.1 C09SLm0105D02.1 55294 55457 (81462) + Copia00094 Copia 4310 4464 (1145) 48 * 1833 12.7 1.6 1.9 C09SLm0105D02.1 55321 55633 (81286) + Unknown00034 Unknown 3705 4016 (5061) 49 12526 8.4 0.4 0.4 C09SLm0105D02.1 55636 58884 (78035) + Copia00019 Copia 2319 8321 (35) 50 486 25.6 5.4 5.4 C09SLm0105D02.1 60254 60493 (76426) C Gypsy00043 Gypsy (860) 13034 12795 51 10228 12.9 0.9 6.2 C09SLm0105D02.1 60778 62634 (74285) + Copia00194 Copia 5167 6924 (3338) 52 1111 29.1 1.2 2.2 C09SLm0105D02.1 63560 63970 (72949) C Copia00145 Copia (1864) 10555 10149 53 891 29.5 5.1 3.0 C09SLm0105D02.1 64044 64549 (72370) C Copia00145 Copia (2586) 9833 9317 53 264 20.7 0.0 4.9 C09SLm0105D02.1 64718 64778 (72141) C Gypsy00043 Gypsy (9656) 4238 4181 54 4148 23.5 1.7 2.5 C09SLm0105D02.1 70732 71992 (64927) C Gypsy00150 Gypsy (6893) 1522 273 55 4369 20.7 3.3 1.8 C09SLm0105D02.1 71999 73008 (63911) C Gypsy00115 Gypsy (1519) 6464 5440 56 * 28985 20.9 1.6 2.0 C09SLm0105D02.1 72301 79633 (57286) + Gypsy00131 Gypsy 34 8231 (2) 57 12294 19.0 2.4 3.7 C09SLm0105D02.1 77284 80274 (56645) + Unknown00025 Unknown 2310 5262 (1046) 58 * 8114 16.4 2.8 3.5 C09SLm0105D02.1 78799 80640 (56279) C Gypsy00115 Gypsy (4) 7979 6151 59 * 675 33.7 2.3 4.2 C09SLm0105D02.1 80959 81487 (55432) C Gypsy00086 Gypsy (5044) 2439 1921 60 * 777 32.9 1.1 0.9 C09SLm0105D02.1 81120 81555 (55364) + Gypsy00121 Gypsy 5890 6326 (2000) 61 490 26.8 5.7 4.5 C09SLm0105D02.1 81710 82013 (54906) C Gypsy00038 Gypsy (7003) 495 1 62 232 20.0 3.0 1.5 C09SLm0105D02.1 82241 82306 (54613) + Unknown00002 Unknown 4785 4851 (5130) 63 266 24.6 8.2 6.0 C09SLm0105D02.1 82508 82641 (54278) + Gypsy00177 Gypsy 4421 4557 (5748) 64 412 31.2 7.0 2.4 C09SLm0105D02.1 85499 85826 (51093) C Unknown00025 Unknown (1792) 4516 4174 65 * 506 27.2 6.0 3.6 C09SLm0105D02.1 85548 85879 (51040) + Gypsy00177 Gypsy 4298 4637 (5668) 66 281 24.9 7.1 9.1 C09SLm0105D02.1 85657 85952 (50967) C Gypsy00033 Gypsy (3813) 7182 6893 67 * 6545 25.3 5.2 5.6 C09SLm0105D02.1 86883 89748 (47171) + Gypsy00198 Gypsy 5334 8186 (58) 68 * 6679 21.7 5.3 3.4 C09SLm0105D02.1 87468 90206 (46713) C Gypsy00202 Gypsy (6611) 3335 1 69 3475 24.5 4.3 3.7 C09SLm0105D02.1 90518 91705 (45214) C Gypsy00038 Gypsy (2419) 5299 4105 70 691 18.7 5.8 4.2 C09SLm0105D02.1 91848 92080 (44839) + Gypsy00074 Gypsy 8212 13041 (1) 71 258 27.7 7.4 1.7 C09SLm0105D02.1 92445 92620 (44299) + Copia00145 Copia 9507 9692 (2727) 72 2415 20.1 2.4 2.0 C09SLm0105D02.1 94604 95188 (41731) C GYPSOL2_LTR Unknown (215) 1365 779 73 2486 22.6 0.6 0.2 C09SLm0105D02.1 95804 96352 (40567) + Gypsy00197 Gypsy 3946 4496 (4445) 74 1714 31.3 2.9 3.1 C09SLm0105D02.1 95819 96625 (40294) C Gypsy00187 Gypsy (1734) 4130 3326 75 * 1959 25.7 0.2 1.8 C09SLm0105D02.1 96625 97127 (39792) C Gypsy00038 Gypsy (4478) 3240 2746 76 * 11740 4.8 1.9 3.2 C09SLm0105D02.1 97102 98665 (38254) C Gypsy00126 Gypsy (6765) 6092 4549 77 * 76922 1.9 0.4 0.0 C09SLm0105D02.1 97320 110262 (26657) + Gypsy00028 Gypsy 3 11847 (0) 78 40264 7.3 2.1 2.0 C09SLm0105D02.1 105494 111173 (25746) C Gypsy00185 Gypsy (489) 9067 1 79 * 2817 27.4 1.2 0.5 C09SLm0105D02.1 111173 112012 (24907) + Gypsy00121 Gypsy 3700 4545 (3781) 80 * 8835 22.5 2.9 3.4 C09SLm0105D02.1 112012 115158 (21761) + Gypsy00177 Gypsy 4964 8403 (459) 81 6951 27.1 2.2 1.7 C09SLm0105D02.1 115159 117298 (19621) C Gypsy00086 Gypsy (3864) 3619 1469 82 395 26.7 4.7 5.3 C09SLm0105D02.1 117147 117316 (19603) + Gypsy00058 Gypsy 5891 6059 (1631) 83 * 254 25.3 6.6 4.8 C09SLm0105D02.1 117601 117766 (19153) + Gypsy00197 Gypsy 8631 8799 (142) 84 245 16.8 9.8 1.0 C09SLm0105D02.1 117680 117781 (19138) C Gypsy00038 Gypsy (208) 7510 7400 85 * 934 30.1 4.3 1.8 C09SLm0105D02.1 118394 118789 (18130) C Gypsy00038 Gypsy (2348) 5370 4965 86 4373 27.6 3.9 5.3 C09SLm0105D02.1 118856 121053 (15866) C Gypsy00139 Gypsy (2937) 7154 4988 87 2961 29.4 5.0 7.1 C09SLm0105D02.1 119166 122197 (14722) + Gypsy00056 Gypsy 5 4160 (9360) 88 395 34.6 0.0 5.3 C09SLm0105D02.1 122553 122778 (14141) C Gypsy00048 Gypsy (2008) 6447 6234 89 * 407 35.5 6.6 5.7 C09SLm0105D02.1 122578 124135 (12784) + Gypsy00013 Gypsy 2449 9708 (3149) 90 566 36.0 4.2 3.3 C09SLm0105D02.1 123090 123812 (13107) C Gypsy00139 Gypsy (7051) 3040 2312 91 4513 28.8 3.6 1.5 C09SLm0105D02.1 125049 126692 (10227) + Gypsy00056 Gypsy 6167 7846 (4304) 92 74744 3.5 0.9 0.5 C09SLm0105D02.1 126694 127010 (9909) + Gypsy00029 Gypsy 1 493 (10572) 93 15508 15.4 1.6 2.6 C09SLm0105D02.1 127011 129990 (6929) C Unknown00025 Unknown (1047) 5261 2311 94 74744 3.5 0.9 0.5 C09SLm0105D02.1 129991 136766 (153) + Gypsy00029 Gypsy 494 11061 (4) 93 2772 14.3 1.3 0.2 C09SLm0105D02.1 136458 136919 (0) C Unknown00025 Unknown (1852) 4456 3990 95 *