psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 200 15 0 0 0 0 0 0 - SGN-E688858 574 359 574 C12HBa0120K04.1 113722 105428 105643 1 215, 0, 105428, 36 3 0 0 0 0 0 0 - SGN-E689376 618 400 439 C12HBa0120K04.1 113722 109968 110007 1 39, 179, 109968, 385 0 0 0 0 0 0 0 + SGN-E551881 510 0 385 C12HBa0120K04.1 113722 96888 97273 1 385, 0, 96888, 454 0 0 0 0 0 1 658 - SGN-E204651 454 0 454 C12HBa0120K04.1 113722 111209 112321 2 36,418, 0,36, 111209,111903, 656 1 0 0 0 0 1 658 - SGN-E205541 657 0 657 C12HBa0120K04.1 113722 111006 112321 2 239,418, 0,239, 111006,111903, 491 8 0 0 1 1 0 0 - SGN-E205513 500 0 500 C12HBa0120K04.1 113722 110628 111127 2 182,317, 0,183, 110628,110810, 625 2 0 0 0 0 1 658 - SGN-E207840 627 0 627 C12HBa0120K04.1 113722 111018 112303 2 227,400, 0,227, 111018,111903, 539 0 0 0 0 0 0 0 - SGN-E208109 539 0 539 C12HBa0120K04.1 113722 110689 111228 1 539, 0, 110689, 418 0 0 1 0 0 0 0 - SGN-E210281 419 0 419 C12HBa0120K04.1 113722 111903 112322 1 419, 0, 111903, 594 0 0 0 0 0 1 658 - SGN-E207541 594 0 594 C12HBa0120K04.1 113722 111069 112321 2 176,418, 0,176, 111069,111903, 547 0 0 0 0 0 0 0 - SGN-E208986 547 0 547 C12HBa0120K04.1 113722 110689 111236 1 547, 0, 110689, 532 0 0 0 0 0 1 658 - SGN-E201545 532 0 532 C12HBa0120K04.1 113722 111047 112237 2 198,334, 0,198, 111047,111903, 223 1 0 0 0 0 1 1 - SGN-E201016 224 0 224 C12HBa0120K04.1 113722 110769 110994 2 14,210, 0,14, 110769,110784, 36 3 0 0 0 0 0 0 + SGN-E211864 670 212 251 C12HBa0120K04.1 113722 109968 110007 1 39, 212, 109968, 364 0 0 0 0 0 0 0 - SGN-E212951 364 0 364 C12HBa0120K04.1 113722 111958 112322 1 364, 0, 111958, 574 0 0 0 0 0 1 658 - SGN-E213076 574 0 574 C12HBa0120K04.1 113722 111090 112322 2 155,419, 0,155, 111090,111903, 723 1 0 0 0 0 1 658 - SGN-E213162 724 0 724 C12HBa0120K04.1 113722 110760 112142 2 485,239, 0,485, 110760,111903, 657 0 0 0 0 0 0 0 - SGN-E212922 657 0 657 C12HBa0120K04.1 113722 111362 112019 1 657, 0, 111362, 622 0 0 1 0 0 1 658 - SGN-E214249 623 0 623 C12HBa0120K04.1 113722 111032 112313 2 213,410, 0,213, 111032,111903, 74 0 0 0 0 0 0 0 + SGN-E214862 368 294 368 C12HBa0120K04.1 113722 110611 110685 1 74, 294, 110611, 299 0 0 0 0 0 0 0 - SGN-E214862 368 0 299 C12HBa0120K04.1 113722 110695 110994 1 299, 69, 110695, 499 0 0 0 0 0 1 658 - SGN-E215083 499 0 499 C12HBa0120K04.1 113722 111164 112321 2 81,418, 0,81, 111164,111903, 646 0 0 0 0 0 1 658 - SGN-E214660 646 0 646 C12HBa0120K04.1 113722 111007 112311 2 238,408, 0,238, 111007,111903, 249 13 0 2 2 33 2 16 - SGN-E320805 439 142 439 C12HBa0120K04.1 113722 102438 102718 3 144,7,113, 0,148,184, 102438,102587,102605, 132 6 0 0 0 0 3 7 - SGN-E322928 408 0 138 C12HBa0120K04.1 113722 25786 25931 4 44,4,36,54, 270,314,318,354, 25786,25831,25840,25877, 576 1 0 0 0 0 1 647 + SGN-E311695 577 0 577 C12HBa0120K04.1 113722 92400 93624 2 452,125, 0,452, 92400,93499, 56 2 0 0 0 0 0 0 - SGN-E367848 663 442 500 C12HBa0120K04.1 113722 47096 47154 1 58, 163, 47096, 532 1 0 0 1 1 3 1559 - SGN-E368852 565 17 551 C12HBa0120K04.1 113722 7609 9701 5 333,47,88,54,11, 14,347,394,482,537, 7609,9124,9444,9636,9690, 408 0 0 0 0 0 5 4554 - SGN-E368853 452 0 408 C12HBa0120K04.1 113722 9124 14086 6 47,88,105,39,65,64, 44,91,179,284,323,388, 9124,9444,9636,9818,11350,14022, 610 0 0 0 3 3 1 62 + SGN-E368232 618 0 613 C12HBa0120K04.1 113722 102175 102847 5 6,32,15,42,515, 0,6,39,55,98, 102175,102243,102275,102290,102332, 539 0 0 0 0 0 2 3166 + SGN-E368319 546 0 539 C12HBa0120K04.1 113722 93593 97298 3 43,72,424, 0,43,115, 93593,96707,96874, 527 0 0 0 0 0 1 647 + SGN-E368320 527 0 527 C12HBa0120K04.1 113722 92390 93564 2 462,65, 0,462, 92390,93499, 384 5 0 113 0 0 0 0 - SGN-E374659 510 0 502 C12HBa0120K04.1 113722 109381 109883 1 502, 8, 109381, 650 3 0 0 0 0 1 658 - SGN-E374660 653 0 653 C12HBa0120K04.1 113722 111010 112321 2 235,418, 0,235, 111010,111903, 80 7 0 0 0 0 0 0 - SGN-E392483 645 246 333 C12HBa0120K04.1 113722 79509 79596 1 87, 312, 79509, 36 3 0 0 0 0 0 0 - SGN-E537970 596 179 218 C12HBa0120K04.1 113722 109968 110007 1 39, 378, 109968, 36 3 0 0 0 0 0 0 - SGN-E539490 794 674 713 C12HBa0120K04.1 113722 109968 110007 1 39, 81, 109968, 222 15 0 0 2 9 2 9 - SGN-E551070 567 321 567 C12HBa0120K04.1 113722 105435 105681 3 208,6,23, 0,216,223, 105435,105649,105658, 85 2 0 0 0 0 0 0 + SGN-E236516 504 95 182 C12HBa0120K04.1 113722 18080 18167 1 87, 95, 18080, 36 3 0 0 0 0 0 0 - SGN-E238018 601 520 559 C12HBa0120K04.1 113722 109968 110007 1 39, 42, 109968, 36 1 0 0 0 0 0 0 + SGN-E241420 441 384 421 C12HBa0120K04.1 113722 51521 51558 1 37, 384, 51521, 36 3 0 0 0 0 0 0 - SGN-E244655 559 321 360 C12HBa0120K04.1 113722 109968 110007 1 39, 199, 109968, 602 1 0 0 1 1 5 3394 + SGN-E717974 667 21 625 C12HBa0120K04.1 113722 85543 89540 6 16,143,44,109,56,235, 21,38,181,225,334,390, 85543,85561,87499,88839,89137,89305, 41 0 0 0 0 0 2 50 - SGN-E719818 608 461 502 C12HBa0120K04.1 113722 112868 112959 3 19,4,18, 106,125,129, 112868,112926,112941, 478 0 0 0 0 0 0 0 - SGN-E697159 478 0 478 C12HBa0120K04.1 113722 17270 17748 1 478, 0, 17270, 36 3 0 0 0 0 0 0 - SGN-E700308 863 607 646 C12HBa0120K04.1 113722 109968 110007 1 39, 217, 109968, 36 3 0 0 0 0 0 0 - SGN-E703993 912 532 571 C12HBa0120K04.1 113722 109968 110007 1 39, 341, 109968, 36 3 0 0 0 0 0 0 - SGN-E704014 897 532 571 C12HBa0120K04.1 113722 109968 110007 1 39, 326, 109968, 36 3 0 0 0 0 0 0 - SGN-E707270 890 771 810 C12HBa0120K04.1 113722 109968 110007 1 39, 80, 109968, 36 3 0 0 0 0 0 0 - SGN-E715605 600 153 192 C12HBa0120K04.1 113722 109968 110007 1 39, 408, 109968, 36 3 0 0 0 0 0 0 - SGN-E716232 877 390 429 C12HBa0120K04.1 113722 109968 110007 1 39, 448, 109968, 45 2 0 0 0 0 0 0 - SGN-E245109 664 138 185 C12HBa0120K04.1 113722 102662 102709 1 47, 479, 102662, 36 3 0 0 0 0 0 0 + SGN-E245979 565 412 451 C12HBa0120K04.1 113722 109968 110007 1 39, 412, 109968, 443 28 0 0 2 2 3 395 + SGN-E249562 623 0 473 C12HBa0120K04.1 113722 107217 108083 6 81,152,136,8,89,5, 0,82,234,371,379,468, 107217,107298,107841,107977,107986,108078, 667 2 0 0 0 0 1 1657 + SGN-E248723 669 0 669 C12HBa0120K04.1 113722 53126 55452 2 39,630, 0,39, 53126,54822, 36 3 0 0 0 0 0 0 + SGN-E251941 623 451 490 C12HBa0120K04.1 113722 109968 110007 1 39, 451, 109968, 417 1 0 0 0 0 2 2 - SGN-E254547 419 1 419 C12HBa0120K04.1 113722 10341 10761 3 404,6,8, 0,404,410, 10341,10746,10753, 36 3 0 0 0 0 0 0 + SGN-E255538 652 377 416 C12HBa0120K04.1 113722 109968 110007 1 39, 377, 109968, 36 3 0 0 0 0 0 0 + SGN-E255192 476 377 416 C12HBa0120K04.1 113722 109968 110007 1 39, 377, 109968, 36 3 0 0 0 0 0 0 + SGN-E255229 651 377 416 C12HBa0120K04.1 113722 109968 110007 1 39, 377, 109968, 462 0 0 0 0 0 0 0 + SGN-E255962 462 0 462 C12HBa0120K04.1 113722 92390 92852 1 462, 0, 92390, 408 16 0 0 6 28 8 44 - SGN-E257656 540 88 540 C12HBa0120K04.1 113722 102289 102757 11 25,6,31,86,5,10,89,24,115,18,15, 0,27,33,64,151,158,173,262,303,419,437, 102289,102317,102324,102361,102450,102455,102465,102576,102605,102723,102742, 114 0 0 0 0 0 0 0 + SGN-E257721 360 246 360 C12HBa0120K04.1 113722 101988 102102 1 114, 246, 101988, 406 2 0 0 0 0 6 4554 - SGN-E256664 408 0 408 C12HBa0120K04.1 113722 9124 14086 7 47,88,105,39,66,4,59, 0,47,135,240,279,345,349, 9124,9444,9636,9818,11350,11512,14027, 389 0 0 0 0 0 5 4554 - SGN-E259000 389 0 389 C12HBa0120K04.1 113722 9143 14086 6 28,88,105,39,65,64, 0,28,116,221,260,325, 9143,9444,9636,9818,11350,14022, 555 0 0 0 0 0 1 647 + SGN-E259511 555 0 555 C12HBa0120K04.1 113722 92390 93592 2 462,93, 0,462, 92390,93499, 344 0 0 0 0 0 0 0 + SGN-E259615 606 260 604 C12HBa0120K04.1 113722 101988 102332 1 344, 260, 101988, 465 0 0 1 0 0 6 7046 - SGN-E256958 466 0 466 C12HBa0120K04.1 113722 9650 17162 7 91,39,65,106,42,78,45, 0,91,130,195,301,343,421, 9650,9818,11350,14022,14214,14933,17117, 210 13 0 0 2 9 3 335 - SGN-E260038 552 320 552 C12HBa0120K04.1 113722 105123 105681 4 6,188,6,23, 0,6,202,209, 105123,105455,105649,105658, 728 0 0 0 0 0 7 5737 - SGN-E261020 728 0 728 C12HBa0120K04.1 113722 7621 14086 8 38,282,47,88,105,39,65,64, 0,38,320,367,455,560,599,664, 7621,7660,9124,9444,9636,9818,11350,14022, 766 8 0 2 1 1 2 2 - SGN-E262858 777 0 777 C12HBa0120K04.1 113722 9982 10760 4 9,59,62,646, 0,9,69,131, 9982,9992,10051,10114, 757 7 0 1 2 3 2 2 - SGN-E262960 768 0 768 C12HBa0120K04.1 113722 9993 10760 5 54,5,9,51,646, 0,56,62,71,122, 9993,10047,10052,10062,10114, 734 0 0 0 0 0 6 5736 - SGN-E263299 734 0 734 C12HBa0120K04.1 113722 7616 14086 7 326,47,88,105,39,65,64, 0,326,373,461,566,605,670, 7616,9124,9444,9636,9818,11350,14022, 476 0 0 0 0 0 0 0 - SGN-E266168 476 0 476 C12HBa0120K04.1 113722 17220 17696 1 476, 0, 17220, 41 0 0 0 0 0 2 614 - SGN-E228583 458 417 458 C12HBa0120K04.1 113722 53215 53870 3 9,21,11, 0,9,30, 53215,53570,53859, 41 0 0 0 0 0 2 614 - SGN-E229255 474 433 474 C12HBa0120K04.1 113722 53215 53870 3 9,21,11, 0,9,30, 53215,53570,53859, 96 7 0 0 0 0 1 105 + SGN-E230552 384 1 104 C12HBa0120K04.1 113722 91862 92070 2 23,80, 1,24, 91862,91990, 483 1 0 0 0 0 1 647 + SGN-E269831 484 0 484 C12HBa0120K04.1 113722 92445 93576 2 407,77, 0,407, 92445,93499, 662 0 0 0 0 0 0 0 + SGN-E275436 662 0 662 C12HBa0120K04.1 113722 56065 56727 1 662, 0, 56065, 33 0 0 0 1 1 0 0 - SGN-E289962 409 76 110 C12HBa0120K04.1 113722 43365 43398 2 4,29, 299,304, 43365,43369, 553 0 0 0 0 0 0 0 - SGN-E300025 553 0 553 C12HBa0120K04.1 113722 17157 17710 1 553, 0, 17157, 356 2 0 0 0 0 0 0 - SGN-E305364 358 0 358 C12HBa0120K04.1 113722 17361 17719 1 358, 0, 17361, 410 18 0 0 7 64 7 40 - SGN-E327106 628 135 627 C12HBa0120K04.1 113722 102250 102718 10 7,5,24,8,11,30,93,130,7,113, 1,9,15,55,63,86,116,210,344,380, 102250,102259,102264,102289,102304,102325,102359,102452,102587,102605, 484 13 0 0 1 1 1 647 + SGN-E313660 508 10 508 C12HBa0120K04.1 113722 92410 93554 3 29,413,55, 10,40,453, 92410,92439,93499, 271 9 0 0 0 0 0 0 + SGN-E313663 280 0 280 C12HBa0120K04.1 113722 92413 92693 1 280, 0, 92413, 272 7 0 0 0 0 0 0 + SGN-E313664 279 0 279 C12HBa0120K04.1 113722 92415 92694 1 279, 0, 92415, 439 0 0 0 0 0 0 0 - SGN-E310360 439 0 439 C12HBa0120K04.1 113722 17275 17714 1 439, 0, 17275, 584 1 0 0 0 0 2 648 + SGN-E314759 604 0 585 C12HBa0120K04.1 113722 92403 93636 3 449,108,28, 0,449,557, 92403,93499,93608, 468 0 0 0 0 0 1 80 - SGN-E316092 468 0 468 C12HBa0120K04.1 113722 26138 26686 2 74,394, 0,74, 26138,26292, 430 12 0 0 0 0 0 0 + SGN-E315144 442 0 442 C12HBa0120K04.1 113722 65246 65688 1 442, 0, 65246, 447 0 0 0 0 0 0 0 - SGN-E316599 447 0 447 C12HBa0120K04.1 113722 17268 17715 1 447, 0, 17268, 479 3 0 0 0 0 0 0 - SGN-E315963 482 0 482 C12HBa0120K04.1 113722 17217 17699 1 482, 0, 17217, 377 2 0 0 1 16 1 15 + SGN-E335449 405 0 395 C12HBa0120K04.1 113722 100546 100940 2 31,348, 0,47, 100546,100592, 331 0 0 0 1 4 1 2 + SGN-E335867 375 0 335 C12HBa0120K04.1 113722 100552 100885 2 323,8, 0,327, 100552,100877, 421 1 0 0 0 0 0 0 + SGN-E354213 429 0 422 C12HBa0120K04.1 113722 1109 1531 1 422, 0, 1109, 421 1 0 0 0 0 0 0 + SGN-E354892 429 0 422 C12HBa0120K04.1 113722 1109 1531 1 422, 0, 1109, 36 3 0 0 0 0 0 0 - SGN-E349600 628 205 244 C12HBa0120K04.1 113722 109968 110007 1 39, 384, 109968, 80 7 0 0 0 0 0 0 + SGN-E349529 729 225 312 C12HBa0120K04.1 113722 79509 79596 1 87, 225, 79509, 471 0 0 113 0 0 0 0 - SGN-E349502 594 0 584 C12HBa0120K04.1 113722 109381 109965 1 584, 10, 109381, 36 3 0 0 0 0 0 0 - SGN-E349673 708 287 326 C12HBa0120K04.1 113722 109968 110007 1 39, 382, 109968, 36 3 0 0 0 0 0 0 - SGN-E350199 608 257 296 C12HBa0120K04.1 113722 109968 110007 1 39, 312, 109968, 153 0 0 113 0 0 0 0 - SGN-E350480 286 0 266 C12HBa0120K04.1 113722 109387 109653 1 266, 20, 109387, 36 3 0 0 0 0 0 0 - SGN-E352348 630 393 432 C12HBa0120K04.1 113722 109968 110007 1 39, 198, 109968, 421 1 0 0 0 0 0 0 + SGN-E352443 429 0 422 C12HBa0120K04.1 113722 1109 1531 1 422, 0, 1109, 55 3 0 0 0 0 0 0 - SGN-E690632 711 481 539 C12HBa0120K04.1 113722 47096 47154 1 58, 172, 47096, 55 3 0 0 0 0 0 0 - SGN-E694472 710 477 535 C12HBa0120K04.1 113722 47096 47154 1 58, 175, 47096, 316 18 0 0 0 0 0 0 - SGN-E355886 580 246 580 C12HBa0120K04.1 113722 107390 107724 1 334, 0, 107390, 273 16 0 0 0 0 0 0 - SGN-E355888 537 248 537 C12HBa0120K04.1 113722 107435 107724 1 289, 0, 107435, 454 7 0 0 0 0 0 0 - SGN-E358399 461 0 461 C12HBa0120K04.1 113722 17273 17734 1 461, 0, 17273,