psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 653 0 0 0 0 0 3 1674 - SGN-E746567 653 0 653 C12HBa0188O11.1 119310 4373 6700 4 147,84,83,339, 0,147,231,314, 4373,5697,6143,6361, 47 4 0 0 0 0 1 1 + SGN-E746070 1315 955 1006 C12HBa0188O11.1 119310 2585 2637 2 16,35, 955,971, 2585,2602, 68 5 0 0 0 0 1 1 - SGN-E206848 505 432 505 C12HBa0188O11.1 119310 15171 15245 2 67,6, 0,67, 15171,15239, 732 3 0 0 0 0 7 4585 - SGN-E212356 735 0 735 C12HBa0188O11.1 119310 44924 50244 8 69,182,80,46,40,74,135,109, 0,69,251,331,377,417,491,626, 44924,45156,45601,46571,46892,47922,48101,50135, 643 4 0 0 0 0 3 592 - SGN-E214137 647 0 647 C12HBa0188O11.1 119310 63594 64833 4 196,211,119,121, 0,196,407,526, 63594,63875,64264,64712, 74 0 0 0 1 3 0 0 - SGN-E367848 663 423 500 C12HBa0188O11.1 119310 28373 28447 2 68,6, 163,234, 28373,28441, 667 0 0 0 0 0 2 497 + SGN-E389519 667 0 667 C12HBa0188O11.1 119310 5754 6918 3 27,83,557, 0,27,110, 5754,6143,6361, 607 1 0 0 0 0 4 1675 + SGN-E389781 609 1 609 C12HBa0188O11.1 119310 4349 6632 5 36,134,84,83,271, 1,37,171,255,338, 4349,4386,5697,6143,6361, 631 0 0 0 0 0 2 2619 - SGN-E537994 639 0 631 C12HBa0188O11.1 119310 33917 37167 3 233,299,99, 8,241,540, 33917,35182,37068, 604 1 0 0 0 0 2 2125 - SGN-E537997 623 0 605 C12HBa0188O11.1 119310 35183 37913 3 298,133,174, 18,316,449, 35183,37068,37739, 804 0 0 0 0 0 1 1309 + SGN-E541545 813 0 804 C12HBa0188O11.1 119310 1733 3846 2 246,558, 0,246, 1733,3288, 315 1 0 0 1 1 1 1050 + SGN-E541547 317 0 317 C12HBa0188O11.1 119310 392 1758 3 135,155,26, 0,135,291, 392,1577,1732, 466 2 0 0 0 0 3 1674 + SGN-E227009 468 0 468 C12HBa0188O11.1 119310 4348 6490 4 172,84,83,129, 0,172,256,339, 4348,5697,6143,6361, 675 0 0 0 0 0 1 1050 + SGN-E707849 858 183 858 C12HBa0188O11.1 119310 174 1899 2 353,322, 183,536, 174,1577, 479 1 0 0 0 0 2 497 + SGN-E711673 499 9 489 C12HBa0188O11.1 119310 5723 6700 3 58,83,339, 9,67,150, 5723,6143,6361, 620 12 0 0 0 0 3 1674 + SGN-E714665 690 0 632 C12HBa0188O11.1 119310 4371 6677 4 149,84,83,316, 0,149,233,316, 4371,5697,6143,6361, 655 14 0 0 0 0 3 1674 + SGN-E716994 683 0 669 C12HBa0188O11.1 119310 4355 6698 4 165,84,83,337, 0,165,249,332, 4355,5697,6143,6361, 649 20 0 0 0 0 3 1674 + SGN-E717001 721 0 669 C12HBa0188O11.1 119310 4355 6698 4 165,84,83,337, 0,165,249,332, 4355,5697,6143,6361, 448 5 0 0 1 51 3 1724 + SGN-E248206 504 0 504 C12HBa0188O11.1 119310 4387 6564 4 133,84,33,203, 0,133,268,301, 4387,5697,6193,6361, 614 0 0 0 0 0 3 587 - SGN-E248305 614 0 614 C12HBa0188O11.1 119310 63877 65078 4 209,119,144,142, 0,209,328,472, 63877,64264,64712,64936, 494 4 0 0 0 0 2 2125 - SGN-E267847 498 0 498 C12HBa0188O11.1 119310 35289 37912 3 192,133,173, 0,192,325, 35289,37068,37739, 31 1 0 0 0 0 0 0 - SGN-E215935 419 382 414 C12HBa0188O11.1 119310 572 604 1 32, 5, 572, 274 4 0 0 0 0 0 0 + SGN-E227989 309 0 278 C12HBa0188O11.1 119310 6422 6700 1 278, 0, 6422, 354 0 0 0 0 0 0 0 + SGN-E274131 542 167 521 C12HBa0188O11.1 119310 174 528 1 354, 167, 174, 43 3 0 0 0 0 0 0 + SGN-E292122 500 19 65 C12HBa0188O11.1 119310 6433 6479 1 46, 19, 6433, 466 0 0 0 0 0 3 1674 + SGN-E291198 466 0 466 C12HBa0188O11.1 119310 4372 6512 4 148,84,83,151, 0,148,232,315, 4372,5697,6143,6361, 437 1 0 0 0 0 3 1674 + SGN-E296607 438 0 438 C12HBa0188O11.1 119310 4346 6458 4 174,84,83,97, 0,174,258,341, 4346,5697,6143,6361, 583 4 0 0 0 0 2 2359 + SGN-E298313 587 0 587 C12HBa0188O11.1 119310 393 3339 3 134,402,51, 0,134,536, 393,1577,3288, 102 5 0 0 1 52 1 55 + SGN-E298249 641 482 641 C12HBa0188O11.1 119310 79323 79485 2 14,93, 482,548, 79323,79392, 60 5 0 0 0 0 0 0 - SGN-E301180 640 495 560 C12HBa0188O11.1 119310 7854 7919 1 65, 80, 7854, 46 1 0 0 1 7 1 8 + SGN-E325277 544 253 307 C12HBa0188O11.1 119310 2523 2578 2 14,33, 253,274, 2523,2545, 663 0 0 0 0 0 3 549 - SGN-E339727 663 0 663 C12HBa0188O11.1 119310 64346 65558 4 37,144,196,286, 0,37,181,377, 64346,64712,64936,65272, 471 0 0 0 0 0 3 1674 + SGN-E336549 471 0 471 C12HBa0188O11.1 119310 4368 6513 4 152,84,83,152, 0,152,236,319, 4368,5697,6143,6361, 383 0 0 0 0 0 1 1050 + SGN-E343371 565 182 565 C12HBa0188O11.1 119310 174 1607 2 353,30, 182,535, 174,1577, 711 0 0 0 1 1 5 673 - SGN-E348646 712 0 712 C12HBa0188O11.1 119310 63709 65093 7 81,84,129,3,113,144,157, 0,81,166,295,298,411,555, 63709,63875,63959,64225,64270,64712,64936, 636 0 0 1 2 2 3 3157 - SGN-E339470 639 0 639 C12HBa0188O11.1 119310 34037 37831 6 61,52,84,215,133,92, 0,62,114,199,414,547, 34037,34098,35182,35266,37068,37739, 659 3 0 0 4 4 0 0 + SGN-E341676 666 0 666 C12HBa0188O11.1 119310 51361 52023 5 24,28,488,86,36, 0,25,54,543,630, 51361,51385,51413,51901,51987, 555 5 0 0 0 0 5 700 - SGN-E365538 560 0 560 C12HBa0188O11.1 119310 65309 66569 6 331,50,42,60,66,11, 0,331,381,423,483,549, 65309,65824,65971,66126,66383,66558, 66 2 0 0 0 0 0 0 - SGN-E690632 711 471 539 C12HBa0188O11.1 119310 28373 28441 1 68, 172, 28373, 66 2 0 0 0 0 0 0 - SGN-E694472 710 467 535 C12HBa0188O11.1 119310 28373 28441 1 68, 175, 28373,