psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 2849 2 0 0 1 1 2 860 - SGN-E745031 2866 0 2852 C12HBa0223G07.1 68036 1875 5586 4 2621,147,56,27, 14,2635,2782,2839, 1875,5355,5503,5559, 351 2 0 0 0 0 0 0 - SGN-E201439 353 0 353 C12HBa0223G07.1 68036 3187 3540 1 353, 0, 3187, 569 1 0 0 0 0 0 0 - SGN-E212011 570 0 570 C12HBa0223G07.1 68036 2493 3063 1 570, 0, 2493, 402 10 0 0 0 0 0 0 - SGN-E213032 412 0 412 C12HBa0223G07.1 68036 3240 3652 1 412, 0, 3240, 672 0 0 0 0 0 0 0 - SGN-E212366 672 0 672 C12HBa0223G07.1 68036 2765 3437 1 672, 0, 2765, 622 0 0 0 0 0 0 0 - SGN-E212502 622 0 622 C12HBa0223G07.1 68036 3550 4172 1 622, 0, 3550, 663 1 0 0 0 0 0 0 - SGN-E578395 664 0 664 C12HBa0223G07.1 68036 2112 2776 1 664, 0, 2112, 460 1 0 0 0 0 0 0 - SGN-E311004 461 0 461 C12HBa0223G07.1 68036 3219 3680 1 461, 0, 3219, 125 7 0 0 1 106 3 504 + SGN-E367984 729 491 729 C12HBa0223G07.1 68036 21536 22172 4 23,31,72,6, 491,620,651,723, 21536,21669,21701,22166, 33 1 0 0 0 0 0 0 - SGN-E368568 613 26 60 C12HBa0223G07.1 68036 19833 19867 1 34, 553, 19833, 604 2 0 0 0 0 0 0 - SGN-E371259 606 0 606 C12HBa0223G07.1 68036 3084 3690 1 606, 0, 3084, 734 0 0 0 0 0 1 1 - SGN-E538192 758 0 734 C12HBa0223G07.1 68036 1875 2610 2 8,726, 24,32, 1875,1884, 715 0 0 0 0 0 1 1 - SGN-E538266 744 0 715 C12HBa0223G07.1 68036 1875 2591 2 9,706, 29,38, 1875,1885, 765 2 0 0 1 1 2 2 - SGN-E538268 768 0 768 C12HBa0223G07.1 68036 2493 3262 4 32,4,73,658, 0,32,37,110, 2493,2526,2530,2604, 557 2 0 0 1 1 0 0 - SGN-E538304 560 0 560 C12HBa0223G07.1 68036 1887 2446 2 489,70, 0,490, 1887,2376, 535 0 0 0 0 0 0 0 - SGN-E538376 535 0 535 C12HBa0223G07.1 68036 1885 2420 1 535, 0, 1885, 801 2 0 0 0 0 1 1 - SGN-E538747 810 0 803 C12HBa0223G07.1 68036 1875 2679 2 9,794, 7,16, 1875,1885, 389 0 0 0 0 0 0 0 - SGN-E538754 407 0 389 C12HBa0223G07.1 68036 1888 2277 1 389, 18, 1888, 827 2 0 0 0 0 4 2505 + SGN-E541196 829 0 829 C12HBa0223G07.1 68036 33564 36898 5 237,224,108,254,6, 0,237,461,569,823, 33564,34926,36018,36254,36892, 301 0 0 0 0 0 1 128 + SGN-E545055 314 0 301 C12HBa0223G07.1 68036 36072 36501 2 54,247, 0,54, 36072,36254, 301 0 0 0 0 0 1 128 + SGN-E545056 314 0 301 C12HBa0223G07.1 68036 36072 36501 2 54,247, 0,54, 36072,36254, 822 0 0 0 0 0 0 0 - SGN-E548016 822 0 822 C12HBa0223G07.1 68036 2440 3262 1 822, 0, 2440, 807 1 0 0 1 2 0 0 - SGN-E548045 817 0 810 C12HBa0223G07.1 68036 1875 2683 2 734,74, 7,743, 1875,2609, 745 2 0 0 2 2 2 1126 + SGN-E548510 749 0 749 C12HBa0223G07.1 68036 33112 34985 5 656,5,20,7,59, 0,657,662,683,690, 33112,33768,33774,33794,34926, 33 1 0 0 0 0 0 0 - SGN-E242653 436 26 60 C12HBa0223G07.1 68036 19833 19867 1 34, 376, 19833, 579 0 0 0 0 0 4 2448 - SGN-E732239 603 6 585 C12HBa0223G07.1 68036 47719 50746 5 244,97,64,101,73, 18,262,359,423,524, 47719,48076,48892,49393,50673, 681 0 0 0 0 0 4 2448 - SGN-E732328 682 1 682 C12HBa0223G07.1 68036 47683 50812 5 280,97,64,101,139, 0,280,377,441,542, 47683,48076,48892,49393,50673, 407 0 0 0 0 0 2 832 - SGN-E734942 413 0 407 C12HBa0223G07.1 68036 47678 48917 3 285,97,25, 6,291,388, 47678,48076,48892, 805 3 0 0 0 0 0 0 - SGN-E703328 808 0 808 C12HBa0223G07.1 68036 3338 4146 1 808, 0, 3338, 853 1 0 0 0 0 0 0 - SGN-E708758 854 0 854 C12HBa0223G07.1 68036 2719 3573 1 854, 0, 2719, 883 2 0 0 0 0 2 198 - SGN-E710453 885 0 885 C12HBa0223G07.1 68036 1674 2757 3 6,804,75, 0,6,810, 1674,1875,2682, 44 1 0 0 1 2 3 157 + SGN-E716126 708 536 583 C12HBa0223G07.1 68036 5483 5685 4 6,13,5,21, 536,544,557,562, 5483,5490,5525,5664, 589 0 0 0 0 0 0 0 - SGN-E244031 589 0 589 C12HBa0223G07.1 68036 7014 7603 1 589, 0, 7014, 583 0 0 0 0 0 0 0 - SGN-E252265 583 0 583 C12HBa0223G07.1 68036 3033 3616 1 583, 0, 3033, 638 0 0 0 0 0 0 0 - SGN-E250498 638 0 638 C12HBa0223G07.1 68036 3293 3931 1 638, 0, 3293, 538 0 0 0 0 0 0 0 - SGN-E262196 538 0 538 C12HBa0223G07.1 68036 2494 3032 1 538, 0, 2494, 538 0 0 0 0 0 0 0 - SGN-E264057 538 0 538 C12HBa0223G07.1 68036 2494 3032 1 538, 0, 2494, 575 0 0 0 0 0 0 0 - SGN-E269210 575 0 575 C12HBa0223G07.1 68036 3115 3690 1 575, 0, 3115, 590 0 0 0 1 7 1 6 - SGN-E265254 597 0 597 C12HBa0223G07.1 68036 2774 3370 2 221,369, 0,228, 2774,3001, 283 3 0 0 0 0 2 1616 + SGN-E278355 296 3 289 C12HBa0223G07.1 68036 48890 50792 3 66,101,119, 3,69,170, 48890,49393,50673, 41 1 0 0 0 0 2 300 - SGN-E234672 359 317 359 C12HBa0223G07.1 68036 5339 5681 3 6,19,17, 0,6,25, 5339,5609,5664, 409 1 0 1 0 0 3 1269 - SGN-E233865 430 0 411 C12HBa0223G07.1 68036 47729 49409 4 234,97,64,16, 19,253,350,414, 47729,48076,48892,49393, 199 0 0 0 0 0 1 1179 - SGN-E283926 199 0 199 C12HBa0223G07.1 68036 49445 50823 2 49,150, 0,49, 49445,50673, 505 0 0 0 0 0 0 0 + SGN-E281756 524 19 524 C12HBa0223G07.1 68036 2080 2585 1 505, 19, 2080, 567 2 0 0 0 0 4 2448 - SGN-E284481 569 0 569 C12HBa0223G07.1 68036 47766 50783 5 197,97,64,101,110, 0,197,294,358,459, 47766,48076,48892,49393,50673, 383 0 0 0 0 0 1 113 + SGN-E280407 430 8 391 C12HBa0223G07.1 68036 47678 48174 2 285,98, 8,293, 47678,48076, 482 0 0 0 0 0 0 0 - SGN-E279883 482 0 482 C12HBa0223G07.1 68036 3390 3872 1 482, 0, 3390, 456 0 0 0 0 0 4 2448 - SGN-E285732 456 0 456 C12HBa0223G07.1 68036 47885 50789 5 78,97,64,101,116, 0,78,175,239,340, 47885,48076,48892,49393,50673, 286 0 0 0 0 0 2 1616 - SGN-E296489 300 0 286 C12HBa0223G07.1 68036 48890 50792 3 66,101,119, 14,80,181, 48890,49393,50673, 549 2 0 0 0 0 4 2448 - SGN-E295258 551 0 551 C12HBa0223G07.1 68036 47793 50792 5 170,97,64,101,119, 0,170,267,331,432, 47793,48076,48892,49393,50673, 397 3 0 0 1 1 0 0 + SGN-E294604 401 0 401 C12HBa0223G07.1 68036 33177 33577 2 139,261, 0,140, 33177,33316, 235 1 0 0 0 0 2 1616 - SGN-E295992 236 0 236 C12HBa0223G07.1 68036 48929 50781 3 27,101,108, 0,27,128, 48929,49393,50673, 455 0 0 0 0 0 4 2448 - SGN-E297614 455 0 455 C12HBa0223G07.1 68036 47889 50792 5 74,97,64,101,119, 0,74,171,235,336, 47889,48076,48892,49393,50673, 600 2 0 0 0 0 4 2448 - SGN-E298698 602 0 602 C12HBa0223G07.1 68036 47742 50792 5 221,97,64,101,119, 0,221,318,382,483, 47742,48076,48892,49393,50673, 544 0 0 0 0 0 4 2448 - SGN-E290159 544 0 544 C12HBa0223G07.1 68036 47789 50781 5 174,97,64,101,108, 0,174,271,335,436, 47789,48076,48892,49393,50673, 521 0 0 0 0 0 4 2448 - SGN-E290102 521 0 521 C12HBa0223G07.1 68036 47859 50828 5 104,97,64,101,155, 0,104,201,265,366, 47859,48076,48892,49393,50673, 472 0 0 0 0 0 0 0 - SGN-E304910 472 0 472 C12HBa0223G07.1 68036 2917 3389 1 472, 0, 2917, 275 11 0 0 1 1 1 128 + SGN-E308432 314 11 298 C12HBa0223G07.1 68036 36084 36498 3 27,15,244, 11,39,54, 36084,36111,36254, 777 2 0 3 0 0 2 2 - SGN-E333674 782 0 782 C12HBa0223G07.1 68036 3328 4112 3 14,61,707, 0,14,75, 3328,3343,3405, 602 1 0 0 0 0 2 860 - SGN-E329207 603 0 603 C12HBa0223G07.1 68036 4125 5588 3 371,147,85, 0,371,518, 4125,5355,5503, 500 0 0 0 0 0 2 860 - SGN-E331120 500 0 500 C12HBa0223G07.1 68036 4244 5604 3 252,147,101, 0,252,399, 4244,5355,5503, 434 0 0 0 0 0 2 860 - SGN-E335164 434 0 434 C12HBa0223G07.1 68036 4305 5599 3 191,147,96, 0,191,338, 4305,5355,5503, 429 3 0 0 0 0 2 860 - SGN-E335166 432 0 432 C12HBa0223G07.1 68036 4307 5599 3 189,147,96, 0,189,336, 4307,5355,5503, 713 0 0 0 0 0 1 812 - SGN-E345568 713 0 713 C12HBa0223G07.1 68036 55416 56941 2 607,106, 0,607, 55416,56835, 701 1 0 0 0 0 0 0 - SGN-E340631 702 0 702 C12HBa0223G07.1 68036 3572 4274 1 702, 0, 3572, 775 0 0 2 1 1 1 1 - SGN-E345072 778 0 778 C12HBa0223G07.1 68036 3372 4150 3 32,44,701, 0,32,77, 3372,3405,3449, 499 0 0 1 0 0 1 113 - SGN-E347064 526 0 500 C12HBa0223G07.1 68036 47536 48149 2 427,73, 26,453, 47536,48076, 511 11 0 0 0 0 0 0 - SGN-E366483 526 4 526 C12HBa0223G07.1 68036 3569 4091 1 522, 0, 3569, 447 18 0 0 2 2 4 861 - SGN-E365419 467 0 467 C12HBa0223G07.1 68036 4274 5600 7 220,4,132,5,64,9,31, 0,220,224,357,362,427,436, 4274,5308,5357,5489,5495,5559,5569, 493 4 0 0 0 0 0 0 - SGN-E365328 497 0 497 C12HBa0223G07.1 68036 3970 4467 1 497, 0, 3970, 602 7 0 0 2 2 3 861 - SGN-E364867 611 0 611 C12HBa0223G07.1 68036 4125 5595 6 371,134,5,64,9,26, 0,371,506,511,576,585, 4125,5355,5489,5495,5559,5569, 221 8 0 0 0 0 0 0 + SGN-E367452 239 10 239 C12HBa0223G07.1 68036 33349 33578 1 229, 10, 33349, 390 11 0 0 0 0 0 0 - SGN-E365857 401 0 401 C12HBa0223G07.1 68036 3314 3715 1 401, 0, 3314, 422 3 0 0 0 0 0 0 - SGN-E365756 425 0 425 C12HBa0223G07.1 68036 3290 3715 1 425, 0, 3290, 40 1 0 0 1 6 1 10 + SGN-E689646 578 241 288 C12HBa0223G07.1 68036 64803 64854 2 33,8, 241,280, 64803,64846, 573 1 0 0 0 0 0 0 - SGN-E358025 574 0 574 C12HBa0223G07.1 68036 56929 57503 1 574, 0, 56929, 427 4 0 0 1 1 3 861 - SGN-E358006 432 0 432 C12HBa0223G07.1 68036 4307 5599 5 189,147,56,11,28, 0,189,336,393,404, 4307,5355,5503,5559,5571,