psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 208 9 0 0 1 9 0 0 + SGN-E745992 1487 1190 1416 C12SLe0124D18.1 85726 14395 14612 2 209,8, 1190,1408, 14395,14604, 414 25 0 0 2 12 2 22 - SGN-E554590 562 23 474 C12SLe0124D18.1 85726 39278 39739 5 23,4,9,355,48, 88,111,123,136,491, 39278,39302,39306,39315,39691, 245 9 0 0 3 39 2 26 - SGN-E555140 479 38 331 C12SLe0124D18.1 85726 39278 39558 5 23,4,9,204,14, 148,171,183,196,427, 39278,39302,39306,39315,39544, 433 0 0 0 0 0 0 0 - SGN-E552342 453 0 433 C12SLe0124D18.1 85726 39217 39650 1 433, 20, 39217, 334 17 0 0 3 13 2 5 - SGN-E553271 527 9 373 C12SLe0124D18.1 85726 39278 39634 5 23,4,9,308,7, 154,177,189,202,511, 39278,39302,39306,39315,39627, 54 2 0 0 1 3 4 132 - SGN-E552737 413 334 393 C12SLe0124D18.1 85726 45463 45651 5 7,21,6,8,14, 20,27,48,54,65, 45463,45485,45620,45628,45637, 197 1 0 0 0 0 0 0 - SGN-E206207 247 36 234 C12SLe0124D18.1 85726 7411 7609 1 198, 13, 7411, 112 2 0 0 0 0 0 0 + SGN-E208968 420 175 289 C12SLe0124D18.1 85726 14426 14540 1 114, 175, 14426, 327 14 0 0 4 55 3 34 - SGN-E556456 594 8 404 C12SLe0124D18.1 85726 39214 39589 7 7,19,5,23,4,9,274, 190,211,230,264,287,299,312, 39214,39221,39241,39278,39302,39306,39315, 601 0 0 0 1 1 3 4464 - SGN-E310973 602 0 602 C12SLe0124D18.1 85726 16548 21613 5 272,90,71,151,17, 0,272,362,433,585, 16548,17511,19136,21445,21596, 111 3 0 0 0 0 0 0 + SGN-E379013 718 175 289 C12SLe0124D18.1 85726 14426 14540 1 114, 175, 14426, 459 26 0 0 4 19 4 26 - SGN-E373328 535 15 519 C12SLe0124D18.1 85726 39225 39736 6 13,8,53,10,377,24, 16,29,39,94,114,496, 39225,39239,39248,39305,39315,39712, 459 26 0 0 4 19 4 26 - SGN-E373329 535 14 518 C12SLe0124D18.1 85726 39225 39736 6 13,8,53,10,377,24, 17,30,40,95,115,497, 39225,39239,39248,39305,39315,39712, 637 0 0 0 0 0 2 1352 + SGN-E375756 637 0 637 C12SLe0124D18.1 85726 40465 42454 3 199,243,195, 0,199,442, 40465,40907,42259, 127 4 0 0 1 18 1 7 + SGN-E375756 637 482 631 C12SLe0124D18.1 85726 70413 70551 2 46,85, 482,546, 70413,70466, 273 0 0 0 0 0 1 106 + SGN-E538190 753 468 741 C12SLe0124D18.1 85726 257 636 2 90,183, 468,558, 257,453, 239 10 0 0 3 57 3 7 + SGN-E542592 704 26 332 C12SLe0124D18.1 85726 14426 14682 5 178,8,16,21,26, 26,213,253,285,306, 14426,14604,14617,14634,14656, 524 1 0 0 0 0 4 4465 - SGN-E544720 546 0 525 C12SLe0124D18.1 85726 16523 21513 5 8,288,90,71,68, 21,29,317,407,478, 16523,16532,17511,19136,21445, 535 1 0 0 0 0 3 4464 - SGN-E544721 536 0 536 C12SLe0124D18.1 85726 16614 21614 4 206,90,71,169, 0,206,296,367, 16614,17511,19136,21445, 400 23 0 0 3 8 3 31 - SGN-E717435 682 66 497 C12SLe0124D18.1 85726 39285 39739 5 5,8,7,355,48, 185,191,202,213,568, 39285,39292,39308,39315,39691, 436 27 0 0 3 41 4 55 - SGN-E717568 627 66 570 C12SLe0124D18.1 85726 39221 39739 7 19,5,23,4,9,355,48, 57,76,110,133,145,158,513, 39221,39241,39278,39302,39306,39315,39691, 157 3 0 0 3 8 2 10 - SGN-E718092 332 28 196 C12SLe0124D18.1 85726 39285 39455 4 5,8,7,140, 136,142,153,164, 39285,39292,39308,39315, 612 0 0 1 0 0 4 4466 - SGN-E720750 759 0 613 C12SLe0124D18.1 85726 16550 21629 5 270,34,54,71,184, 146,416,450,504,575, 16550,17511,17547,19136,21445, 739 0 0 0 0 0 1 568 - SGN-E720947 806 29 768 C12SLe0124D18.1 85726 34343 35650 2 400,339, 38,438, 34343,35311, 400 23 0 0 3 8 3 31 - SGN-E721425 717 38 469 C12SLe0124D18.1 85726 39285 39739 5 5,8,7,355,48, 248,254,265,276,631, 39285,39292,39308,39315,39691, 578 1 0 0 0 0 3 4464 - SGN-E732279 601 4 583 C12SLe0124D18.1 85726 16570 21613 4 250,90,71,168, 18,268,358,429, 16570,17511,19136,21445, 414 25 0 0 2 12 2 22 - SGN-E734482 589 18 469 C12SLe0124D18.1 85726 39278 39739 5 23,4,9,355,48, 120,143,155,168,523, 39278,39302,39306,39315,39691, 729 0 0 0 0 0 1 568 - SGN-E734542 746 0 729 C12SLe0124D18.1 85726 34261 35558 2 482,247, 17,499, 34261,35311, 689 0 0 0 0 0 1 2251 - SGN-E734562 699 0 689 C12SLe0124D18.1 85726 22622 25562 2 414,275, 10,424, 22622,25287, 414 25 0 0 2 12 2 22 - SGN-E734927 589 18 469 C12SLe0124D18.1 85726 39278 39739 5 23,4,9,355,48, 120,143,155,168,523, 39278,39302,39306,39315,39691, 705 0 0 0 1 162 2 1349 + SGN-E736538 867 0 867 C12SLe0124D18.1 85726 40554 42608 3 110,243,352, 0,110,515, 40554,40907,42256, 161 7 0 0 2 24 3 11 + SGN-E736538 867 558 750 C12SLe0124D18.1 85726 70413 70592 4 46,85,8,29, 558,622,713,721, 70413,70466,70554,70563, 373 18 0 0 5 27 4 13 - SGN-E711567 681 48 466 C12SLe0124D18.1 85726 39278 39682 7 23,4,9,289,13,44,9, 215,238,250,263,553,574,624, 39278,39302,39306,39315,39608,39626,39673, 378 22 0 0 3 18 2 4 - SGN-E711649 614 56 474 C12SLe0124D18.1 85726 39278 39682 5 23,4,9,355,9, 140,163,175,188,549, 39278,39302,39306,39315,39673, 543 0 0 2 0 0 2 2226 - SGN-E712097 652 0 545 C12SLe0124D18.1 85726 16571 19342 3 249,90,206, 107,356,446, 16571,17511,19136, 400 23 0 0 3 8 3 31 - SGN-E712485 682 23 454 C12SLe0124D18.1 85726 39285 39739 5 5,8,7,355,48, 228,234,245,256,611, 39285,39292,39308,39315,39691, 42 0 0 0 0 0 4 21 - SGN-E713130 667 562 604 C12SLe0124D18.1 85726 45461 45524 5 9,11,14,4,4, 63,72,83,97,101, 45461,45485,45500,45515,45520, 414 25 0 0 2 12 2 22 - SGN-E714105 552 19 470 C12SLe0124D18.1 85726 39278 39739 5 23,4,9,355,48, 82,105,117,130,485, 39278,39302,39306,39315,39691, 545 1 0 0 0 0 0 0 - SGN-E244034 554 0 546 C12SLe0124D18.1 85726 39223 39769 1 546, 8, 39223, 348 5 0 0 0 0 1 243 + SGN-E251515 353 0 353 C12SLe0124D18.1 85726 40465 41061 2 199,154, 0,199, 40465,40907, 142 10 0 0 1 29 3 51 + SGN-E253500 468 27 208 C12SLe0124D18.1 85726 25916 26119 4 18,52,44,38, 27,45,97,170, 25916,25937,26011,26081, 425 1 0 0 0 0 1 243 + SGN-E257909 426 0 426 C12SLe0124D18.1 85726 40465 41134 2 199,227, 0,199, 40465,40907, 414 25 0 0 2 12 2 22 - SGN-E259266 591 13 464 C12SLe0124D18.1 85726 39278 39739 5 23,4,9,355,48, 127,150,162,175,530, 39278,39302,39306,39315,39691, 414 25 0 0 2 12 2 22 - SGN-E258309 516 13 464 C12SLe0124D18.1 85726 39278 39739 5 23,4,9,355,48, 52,75,87,100,455, 39278,39302,39306,39315,39691, 524 0 0 0 0 0 2 1352 + SGN-E259795 524 0 524 C12SLe0124D18.1 85726 40465 42341 3 199,243,82, 0,199,442, 40465,40907,42259, 400 23 0 0 3 8 3 31 - SGN-E260582 566 13 444 C12SLe0124D18.1 85726 39285 39739 5 5,8,7,355,48, 122,128,139,150,505, 39285,39292,39308,39315,39691, 730 1 0 1 0 0 2 1352 + SGN-E260943 732 0 732 C12SLe0124D18.1 85726 40465 42549 3 199,243,290, 0,199,442, 40465,40907,42259, 161 7 0 0 2 24 3 11 + SGN-E260943 732 482 674 C12SLe0124D18.1 85726 70413 70592 4 46,85,8,29, 482,546,637,645, 70413,70466,70554,70563, 569 1 0 0 0 0 1 568 - SGN-E268518 570 0 570 C12SLe0124D18.1 85726 34482 35620 2 261,309, 0,261, 34482,35311, 401 0 0 0 0 0 0 0 - SGN-E223068 416 0 401 C12SLe0124D18.1 85726 34215 34616 1 401, 15, 34215, 416 1 0 0 0 0 0 0 - SGN-E223122 435 0 417 C12SLe0124D18.1 85726 34218 34635 1 417, 18, 34218, 433 0 0 1 0 0 0 0 - SGN-E218872 453 0 434 C12SLe0124D18.1 85726 34259 34693 1 434, 19, 34259, 180 9 0 0 3 21 2 10 - SGN-E220849 343 0 210 C12SLe0124D18.1 85726 39278 39477 6 23,4,9,129,6,18, 133,156,168,181,310,325, 39278,39302,39306,39315,39453,39459, 414 0 0 0 0 0 2 2226 - SGN-E226030 424 0 414 C12SLe0124D18.1 85726 16536 19176 3 284,90,40, 10,294,384, 16536,17511,19136, 432 0 0 0 0 0 2 2226 - SGN-E226126 442 0 432 C12SLe0124D18.1 85726 16536 19194 3 284,90,58, 10,294,384, 16536,17511,19136, 623 0 0 0 0 0 1 568 - SGN-E276917 623 0 623 C12SLe0124D18.1 85726 34433 35624 2 310,313, 0,310, 34433,35311, 185 0 0 0 0 0 1 106 - SGN-E284879 576 0 185 C12SLe0124D18.1 85726 257 548 2 90,95, 391,481, 257,453, 567 0 0 0 0 0 1 568 - SGN-E287286 567 0 567 C12SLe0124D18.1 85726 34484 35619 2 259,308, 0,259, 34484,35311, 459 26 0 0 4 19 4 26 - SGN-E290619 535 14 518 C12SLe0124D18.1 85726 39225 39736 6 13,8,53,10,377,24, 17,30,40,95,115,497, 39225,39239,39248,39305,39315,39712, 469 0 0 0 0 0 3 4464 - SGN-E284714 469 0 469 C12SLe0124D18.1 85726 16674 21607 4 146,90,71,162, 0,146,236,307, 16674,17511,19136,21445, 382 1 0 0 0 0 2 2226 + SGN-E299000 445 45 428 C12SLe0124D18.1 85726 16599 19208 3 221,90,72, 45,266,356, 16599,17511,19136, 239 10 0 0 3 57 3 7 + SGN-E301126 485 25 331 C12SLe0124D18.1 85726 14426 14682 5 178,8,16,21,26, 25,212,252,284,305, 14426,14604,14617,14634,14656, 363 21 0 0 4 14 3 13 - SGN-E307331 554 44 442 C12SLe0124D18.1 85726 39285 39682 5 5,8,7,355,9, 112,118,129,140,501, 39285,39292,39308,39315,39673, 544 0 0 0 0 0 3 4464 - SGN-E307060 544 0 544 C12SLe0124D18.1 85726 16577 21585 4 243,90,71,140, 0,243,333,404, 16577,17511,19136,21445, 498 13 0 0 0 0 4 4465 - SGN-E307156 511 0 511 C12SLe0124D18.1 85726 16609 21585 5 9,201,90,71,140, 0,9,210,300,371, 16609,16619,17511,19136,21445, 611 0 0 0 0 0 3 4464 - SGN-E306704 611 0 611 C12SLe0124D18.1 85726 16538 21613 4 282,90,71,168, 0,282,372,443, 16538,17511,19136,21445, 189 0 0 0 0 0 0 0 - SGN-E309562 201 0 189 C12SLe0124D18.1 85726 16529 16718 1 189, 12, 16529, 360 11 0 0 1 45 2 1323 - SGN-E331901 445 29 445 C12SLe0124D18.1 85726 480 2174 3 234,125,12, 0,234,404, 480,1950,2162, 562 0 0 0 0 0 2 1342 - SGN-E332009 746 0 562 C12SLe0124D18.1 85726 257 2161 3 90,261,211, 184,274,535, 257,453,1950, 535 4 0 0 0 0 2 1342 - SGN-E331905 539 0 539 C12SLe0124D18.1 85726 280 2161 3 67,261,211, 0,67,328, 280,453,1950, 551 0 0 0 0 0 2 1334 - SGN-E332815 773 0 551 C12SLe0124D18.1 85726 257 2142 3 90,269,192, 222,312,581, 257,453,1950, 523 0 0 0 2 8 8 587 - SGN-E325342 531 0 531 C12SLe0124D18.1 85726 34573 35683 9 170,245,6,7,7,40,20,14,14, 0,170,415,421,428,435,479,503,517, 34573,35311,35557,35564,35572,35580,35627,35654,35669, 488 0 0 0 0 0 2 1334 - SGN-E328537 735 0 488 C12SLe0124D18.1 85726 257 2079 3 90,269,129, 247,337,606, 257,453,1950, 689 0 0 0 0 0 1 568 - SGN-E328782 689 0 689 C12SLe0124D18.1 85726 34385 35642 2 358,331, 0,358, 34385,35311, 647 4 0 0 0 0 1 568 - SGN-E328783 651 0 651 C12SLe0124D18.1 85726 34423 35642 2 320,331, 0,320, 34423,35311, 515 2 0 0 0 0 3 4464 - SGN-E338777 521 4 521 C12SLe0124D18.1 85726 16627 21608 4 193,90,71,163, 0,193,283,354, 16627,17511,19136,21445, 497 0 0 0 0 0 2 1342 - SGN-E342431 738 0 497 C12SLe0124D18.1 85726 257 2096 3 90,261,146, 241,331,592, 257,453,1950, 459 26 0 0 4 19 4 26 - SGN-E354535 537 15 519 C12SLe0124D18.1 85726 39225 39736 6 13,8,53,10,377,24, 18,31,41,96,116,498, 39225,39239,39248,39305,39315,39712, 617 1 0 0 0 0 1 568 - SGN-E355136 618 0 618 C12SLe0124D18.1 85726 34279 35465 2 464,154, 0,464, 34279,35311, 446 28 0 0 4 30 4 37 - SGN-E356135 537 15 519 C12SLe0124D18.1 85726 39225 39736 5 14,6,53,377,24, 18,33,41,116,498, 39225,39241,39248,39315,39712, 35 0 0 0 0 0 2 4 + SGN-E356221 458 396 431 C12SLe0124D18.1 85726 64818 64857 3 10,4,21, 396,406,410, 64818,64829,64836, 60 1 0 0 0 0 1 28 - SGN-E366920 185 124 185 C12SLe0124D18.1 85726 3918 4007 2 11,50, 0,11, 3918,3957, 313 7 0 0 0 0 2 1237 - SGN-E359428 320 0 320 C12SLe0124D18.1 85726 586 2143 3 128,185,7, 0,128,313, 586,1950,2136,