psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 32 0 0 0 0 0 0 0 - SGN-E200836 501 114 146 C12HBa0020C08.1 80839 67064 67096 1 32, 355, 67064, 733 3 0 0 0 0 7 12684 + SGN-E212356 736 0 736 C12HBa0020C08.1 80839 37257 50677 8 109,135,74,40,46,80,182,70, 0,109,244,318,358,404,484,666, 37257,47364,47604,48668,48983,49919,50262,50607, 633 8 0 0 3 4 6 596 + SGN-E214137 648 3 648 C12HBa0020C08.1 80839 63212 64449 9 6,12,47,9,10,30,119,211,197, 3,9,21,69,79,91,121,240,451, 63212,63219,63233,63280,63289,63300,63659,63956,64252, 30 0 0 0 0 0 0 0 - SGN-E215060 596 553 583 C12HBa0020C08.1 80839 67063 67093 1 30, 13, 67063, 31 1 0 0 0 0 0 0 - SGN-E215935 420 5 37 C12HBa0020C08.1 80839 17615 17647 1 32, 383, 17615, 467 2 0 0 0 0 3 1674 - SGN-E227009 469 0 469 C12HBa0020C08.1 80839 11728 13871 4 130,83,84,172, 0,130,213,297, 11728,11993,12438,13699, 275 4 0 0 0 0 0 0 + SGN-E227989 310 31 310 C12HBa0020C08.1 80839 11519 11798 1 279, 31, 11519, 30 0 0 0 0 0 0 0 - SGN-E242278 537 495 525 C12HBa0020C08.1 80839 67063 67093 1 30, 12, 67063, 31 0 0 0 0 0 0 0 - SGN-E243117 581 479 510 C12HBa0020C08.1 80839 67064 67095 1 31, 71, 67064, 449 5 0 0 1 51 3 1724 - SGN-E248206 505 0 505 C12HBa0020C08.1 80839 11654 13832 4 204,33,84,133, 0,204,288,372, 11654,11993,12438,13699, 576 4 0 0 4 35 6 629 + SGN-E248305 615 0 615 C12HBa0020C08.1 80839 62957 64166 9 137,6,12,47,9,10,30,119,210, 0,168,174,186,234,244,256,286,405, 62957,63212,63219,63233,63280,63289,63300,63659,63956, 38 0 0 0 1 19 1 1 + SGN-E249876 614 419 476 C12HBa0020C08.1 80839 67054 67093 2 8,30, 419,446, 67054,67063, 42 1 0 0 0 0 0 0 + SGN-E253500 469 167 210 C12HBa0020C08.1 80839 28096 28139 1 43, 167, 28096, 495 4 0 0 0 0 2 2125 + SGN-E267847 499 0 499 C12HBa0020C08.1 80839 41250 43874 3 173,133,193, 0,173,306, 41250,41961,43681, 376 0 0 0 0 0 0 0 - SGN-E274131 543 145 521 C12HBa0020C08.1 80839 17691 18067 1 376, 22, 17691, 467 0 0 0 0 0 3 1674 - SGN-E291198 467 0 467 C12HBa0020C08.1 80839 11706 13847 4 152,83,84,148, 0,152,235,319, 11706,11993,12438,13699, 490 0 0 0 0 0 0 0 + SGN-E294173 519 29 519 C12HBa0020C08.1 80839 70424 70914 1 490, 29, 70424, 438 1 0 0 0 0 3 1674 - SGN-E296607 439 0 439 C12HBa0020C08.1 80839 11760 13873 4 98,83,84,174, 0,98,181,265, 11760,11993,12438,13699, 584 4 0 0 0 0 2 2359 - SGN-E298313 588 0 588 C12HBa0020C08.1 80839 14879 17826 3 52,402,134, 0,52,454, 14879,16240,17692, 46 1 0 0 1 7 1 8 - SGN-E325277 545 253 307 C12HBa0020C08.1 80839 15641 15696 2 33,14, 238,278, 15641,15682, 41 0 0 0 1 5 2 9 + SGN-E329888 585 101 147 C12HBa0020C08.1 80839 67063 67113 3 30,7,4, 101,136,143, 67063,67101,67109, 31 0 0 0 0 0 0 0 + SGN-E331093 513 140 171 C12HBa0020C08.1 80839 67064 67095 1 31, 140, 67064, 472 0 0 0 0 0 3 1674 - SGN-E336549 472 0 472 C12HBa0020C08.1 80839 11705 13851 4 153,83,84,152, 0,153,236,320, 11705,11993,12438,13699, 637 0 0 1 2 2 3 3157 + SGN-E339470 640 0 640 C12HBa0020C08.1 80839 41331 45126 6 92,133,215,84,54,60, 0,92,225,441,525,580, 41331,41961,43681,43896,45012,45066, 625 4 0 0 4 35 6 591 + SGN-E339727 664 0 664 C12HBa0020C08.1 80839 62477 63697 9 286,191,6,12,47,9,10,30,38, 0,286,508,514,526,574,584,596,626, 62477,62903,63212,63219,63233,63280,63289,63300,63659, 660 3 0 0 4 4 0 0 - SGN-E341676 667 0 667 C12HBa0020C08.1 80839 35477 36140 5 40,86,485,29,23, 0,41,128,614,644, 35477,35517,35603,36088,36117, 376 0 0 0 0 0 0 0 - SGN-E343371 566 160 536 C12HBa0020C08.1 80839 17691 18067 1 376, 30, 17691, 673 4 0 0 5 36 8 715 + SGN-E348646 713 0 713 C12HBa0020C08.1 80839 62942 64334 12 152,6,12,47,9,10,30,113,5,127,84,82, 0,183,189,201,249,259,271,301,414,419,547,631, 62942,63212,63219,63233,63280,63289,63300,63659,63773,63956,64083,64252, 33 0 0 0 0 0 1 2 - SGN-E354002 423 362 395 C12HBa0020C08.1 80839 67055 67090 2 6,27, 28,34, 67055,67063, 33 0 0 0 0 0 1 2 - SGN-E355015 412 351 384 C12HBa0020C08.1 80839 67055 67090 2 6,27, 28,34, 67055,67063, 33 0 0 0 0 0 1 2 - SGN-E357391 447 362 395 C12HBa0020C08.1 80839 67055 67090 2 6,27, 52,58, 67055,67063, 33 0 0 0 0 0 1 2 - SGN-E357777 467 334 367 C12HBa0020C08.1 80839 67055 67090 2 6,27, 100,106, 67055,67063, 556 5 0 0 0 0 5 700 + SGN-E365538 561 0 561 C12HBa0020C08.1 80839 61466 62727 6 11,66,60,42,50,332, 0,11,77,137,179,229, 61466,61586,61849,62022,62161,62395, 678 1 0 0 0 0 1 346 - SGN-E372441 679 0 679 C12HBa0020C08.1 80839 70532 71557 2 672,7, 0,672, 70532,71550, 616 0 0 0 0 0 0 0 + SGN-E372442 645 29 645 C12HBa0020C08.1 80839 70424 71040 1 616, 29, 70424, 668 0 0 0 0 0 2 497 + SGN-E389519 668 0 668 C12HBa0020C08.1 80839 11301 12466 3 557,83,28, 0,557,640, 11301,11993,12438, 608 1 0 0 0 0 4 1675 - SGN-E389781 610 1 610 C12HBa0020C08.1 80839 11586 13870 5 272,83,84,145,25, 0,272,355,439,584, 11586,11993,12438,13699,13845, 36 0 0 0 1 1 1 6 + SGN-E395261 409 313 350 C12HBa0020C08.1 80839 67051 67093 2 6,30, 313,320, 67051,67063, 632 0 0 0 0 0 2 2619 - SGN-E537994 640 8 640 C12HBa0020C08.1 80839 41994 45245 3 100,299,233, 0,100,399, 41994,43681,45012, 604 1 0 0 0 0 2 2125 + SGN-E537997 624 0 605 C12HBa0020C08.1 80839 41249 43979 3 174,133,298, 0,174,307, 41249,41961,43681, 805 0 0 0 0 0 1 1309 + SGN-E541545 814 9 814 C12HBa0020C08.1 80839 14373 16487 2 558,247, 9,567, 14373,16240, 316 1 0 0 1 1 1 1050 - SGN-E541547 318 0 318 C12HBa0020C08.1 80839 16460 17827 3 29,153,135, 0,30,183, 16460,16489,17692, 38 0 0 0 1 19 1 1 - SGN-E577613 605 124 181 C12HBa0020C08.1 80839 67054 67093 2 8,30, 424,451, 67054,67063, 32 0 0 0 0 0 0 0 - SGN-E577818 732 700 732 C12HBa0020C08.1 80839 78486 78518 1 32, 0, 78486, 698 0 0 0 0 0 1 1050 - SGN-E707849 859 161 859 C12HBa0020C08.1 80839 16319 18067 2 323,375, 0,323, 16319,17692, 38 0 0 0 1 19 1 1 + SGN-E711651 621 431 488 C12HBa0020C08.1 80839 67054 67093 2 8,30, 431,458, 67054,67063, 479 1 0 0 0 0 2 497 - SGN-E711673 500 9 489 C12HBa0020C08.1 80839 11519 12496 3 339,83,58, 11,350,433, 11519,11993,12438, 620 12 0 0 0 0 3 1674 - SGN-E714665 691 0 632 C12HBa0020C08.1 80839 11542 13848 4 316,83,84,149, 59,375,458,542, 11542,11993,12438,13699, 38 0 0 0 1 19 1 1 + SGN-E716699 657 436 493 C12HBa0020C08.1 80839 67054 67093 2 8,30, 436,463, 67054,67063, 655 13 0 0 1 1 4 1675 - SGN-E716994 684 0 669 C12HBa0020C08.1 80839 11521 13864 5 337,83,10,73,165, 15,352,435,446,519, 11521,11993,12396,12449,13699, 649 19 0 0 1 1 4 1675 - SGN-E717001 722 0 669 C12HBa0020C08.1 80839 11521 13864 5 337,83,10,73,165, 53,390,473,484,557, 11521,11993,12396,12449,13699, 38 0 0 0 1 19 1 1 + SGN-E720715 649 352 409 C12HBa0020C08.1 80839 67054 67093 2 8,30, 352,379, 67054,67063, 51 0 0 0 0 0 0 0 - SGN-E728671 654 462 513 C12HBa0020C08.1 80839 79215 79266 1 51, 141, 79215, 51 0 0 0 0 0 0 0 - SGN-E736467 669 435 486 C12HBa0020C08.1 80839 79215 79266 1 51, 183, 79215, 51 0 0 0 0 0 0 0 - SGN-E739259 804 463 514 C12HBa0020C08.1 80839 79215 79266 1 51, 290, 79215, 51 0 0 0 0 0 0 0 - SGN-E739322 764 464 515 C12HBa0020C08.1 80839 79215 79266 1 51, 249, 79215, 51 0 0 0 0 0 0 0 - SGN-E740193 667 433 484 C12HBa0020C08.1 80839 79215 79266 1 51, 183, 79215, 51 0 0 0 0 0 0 0 - SGN-E740976 667 433 484 C12HBa0020C08.1 80839 79215 79266 1 51, 183, 79215, 38 0 0 0 1 19 1 1 + SGN-E744927 583 405 462 C12HBa0020C08.1 80839 67054 67093 2 8,30, 405,432, 67054,67063, 653 0 0 0 0 0 3 1674 + SGN-E746567 653 0 653 C12HBa0020C08.1 80839 11519 13846 4 339,83,84,147, 0,339,422,506, 11519,11993,12438,13699,