psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 653 0 0 0 0 0 3 1674 + SGN-E746567 653 0 653 C12HBa0020C08.1 80839 11519 13846 4 339,83,84,147, 0,339,422,506, 11519,11993,12438,13699, 732 3 0 0 0 0 7 12684 + SGN-E212356 735 0 735 C12HBa0020C08.1 80839 37257 50676 8 109,135,74,40,46,80,182,69, 0,109,244,318,358,404,484,666, 37257,47364,47604,48668,48983,49919,50262,50607, 632 8 0 0 3 4 6 596 + SGN-E214137 647 3 647 C12HBa0020C08.1 80839 63212 64448 9 6,12,47,9,10,30,119,211,196, 3,9,21,69,79,91,121,240,451, 63212,63219,63233,63280,63289,63300,63659,63956,64252, 32 0 0 0 0 0 0 0 - SGN-E577818 732 700 732 C12HBa0020C08.1 80839 78486 78518 1 32, 0, 78486, 74 0 0 0 1 3 0 0 - SGN-E367848 663 423 500 C12HBa0020C08.1 80839 23123 23197 2 68,6, 163,234, 23123,23191, 670 1 0 0 0 0 0 0 + SGN-E372441 678 0 671 C12HBa0020C08.1 80839 70533 71204 1 671, 0, 70533, 615 0 0 0 0 0 0 0 + SGN-E372442 644 29 644 C12HBa0020C08.1 80839 70424 71039 1 615, 29, 70424, 667 0 0 0 0 0 2 497 - SGN-E389519 667 0 667 C12HBa0020C08.1 80839 11301 12465 3 557,83,27, 0,557,640, 11301,11993,12438, 607 1 0 0 0 0 4 1675 - SGN-E389781 609 1 609 C12HBa0020C08.1 80839 11587 13870 5 271,83,84,145,25, 0,271,354,438,583, 11587,11993,12438,13699,13845, 631 0 0 0 0 0 2 2619 + SGN-E537994 639 0 631 C12HBa0020C08.1 80839 41995 45245 3 99,299,233, 0,99,398, 41995,43681,45012, 604 1 0 0 0 0 2 2125 + SGN-E537997 623 0 605 C12HBa0020C08.1 80839 41249 43979 3 174,133,298, 0,174,307, 41249,41961,43681, 804 0 0 0 0 0 1 1309 - SGN-E541545 813 0 804 C12HBa0020C08.1 80839 14373 16486 2 558,246, 9,567, 14373,16240, 315 1 0 0 1 1 1 1050 - SGN-E541547 317 0 317 C12HBa0020C08.1 80839 16461 17827 3 28,153,135, 0,29,182, 16461,16489,17692, 87 6 0 0 0 0 1 1 + SGN-E543212 742 0 93 C12HBa0020C08.1 80839 29263 29357 2 89,4, 0,89, 29263,29353, 466 2 0 0 0 0 3 1674 - SGN-E227009 468 0 468 C12HBa0020C08.1 80839 11729 13871 4 129,83,84,172, 0,129,212,296, 11729,11993,12438,13699, 51 0 0 0 0 0 0 0 - SGN-E728671 653 462 513 C12HBa0020C08.1 80839 79215 79266 1 51, 140, 79215, 51 0 0 0 0 0 0 0 - SGN-E736467 668 435 486 C12HBa0020C08.1 80839 79215 79266 1 51, 182, 79215, 51 0 0 0 0 0 0 0 - SGN-E739259 803 463 514 C12HBa0020C08.1 80839 79215 79266 1 51, 289, 79215, 51 0 0 0 0 0 0 0 - SGN-E739322 763 464 515 C12HBa0020C08.1 80839 79215 79266 1 51, 248, 79215, 51 0 0 0 0 0 0 0 - SGN-E740193 666 433 484 C12HBa0020C08.1 80839 79215 79266 1 51, 182, 79215, 51 0 0 0 0 0 0 0 - SGN-E740976 666 433 484 C12HBa0020C08.1 80839 79215 79266 1 51, 182, 79215, 675 0 0 0 0 0 1 1050 - SGN-E707849 858 183 858 C12HBa0020C08.1 80839 16320 18045 2 322,353, 0,322, 16320,17692, 479 1 0 0 0 0 2 497 - SGN-E711673 499 9 489 C12HBa0020C08.1 80839 11519 12496 3 339,83,58, 10,349,432, 11519,11993,12438, 620 12 0 0 0 0 3 1674 - SGN-E714665 690 0 632 C12HBa0020C08.1 80839 11542 13848 4 316,83,84,149, 58,374,457,541, 11542,11993,12438,13699, 655 13 0 0 1 1 4 1675 - SGN-E716994 683 0 669 C12HBa0020C08.1 80839 11521 13864 5 337,83,10,73,165, 14,351,434,445,518, 11521,11993,12396,12449,13699, 649 19 0 0 1 1 4 1675 - SGN-E717001 721 0 669 C12HBa0020C08.1 80839 11521 13864 5 337,83,10,73,165, 52,389,472,483,556, 11521,11993,12396,12449,13699, 448 5 0 0 1 51 3 1724 - SGN-E248206 504 0 504 C12HBa0020C08.1 80839 11655 13832 4 203,33,84,133, 0,203,287,371, 11655,11993,12438,13699, 575 4 0 0 4 35 6 629 + SGN-E248305 614 0 614 C12HBa0020C08.1 80839 62957 64165 9 137,6,12,47,9,10,30,119,209, 0,168,174,186,234,244,256,286,405, 62957,63212,63219,63233,63280,63289,63300,63659,63956, 111 7 0 0 1 19 2 95 + SGN-E253500 468 73 210 C12HBa0020C08.1 80839 27926 28139 3 30,45,43, 73,103,167, 27926,28030,28096, 494 4 0 0 0 0 2 2125 + SGN-E267847 498 0 498 C12HBa0020C08.1 80839 41250 43873 3 173,133,192, 0,173,306, 41250,41961,43681, 31 1 0 0 0 0 0 0 + SGN-E215935 419 382 414 C12HBa0020C08.1 80839 17615 17647 1 32, 382, 17615, 274 4 0 0 0 0 0 0 - SGN-E227989 309 0 278 C12HBa0020C08.1 80839 11519 11797 1 278, 31, 11519, 354 0 0 0 0 0 0 0 - SGN-E274131 542 167 521 C12HBa0020C08.1 80839 17691 18045 1 354, 21, 17691, 489 0 0 0 0 0 0 0 + SGN-E294173 518 29 518 C12HBa0020C08.1 80839 70424 70913 1 489, 29, 70424, 466 0 0 0 0 0 3 1674 - SGN-E291198 466 0 466 C12HBa0020C08.1 80839 11707 13847 4 151,83,84,148, 0,151,234,318, 11707,11993,12438,13699, 437 1 0 0 0 0 3 1674 - SGN-E296607 438 0 438 C12HBa0020C08.1 80839 11761 13873 4 97,83,84,174, 0,97,180,264, 11761,11993,12438,13699, 583 4 0 0 0 0 2 2359 - SGN-E298313 587 0 587 C12HBa0020C08.1 80839 14880 17826 3 51,402,134, 0,51,453, 14880,16240,17692, 60 5 0 0 0 0 0 0 + SGN-E301180 640 495 560 C12HBa0020C08.1 80839 10300 10365 1 65, 495, 10300, 46 1 0 0 1 7 1 8 - SGN-E325277 544 253 307 C12HBa0020C08.1 80839 15641 15696 2 33,14, 237,277, 15641,15682, 624 4 0 0 4 35 6 591 + SGN-E339727 663 0 663 C12HBa0020C08.1 80839 62477 63696 9 286,191,6,12,47,9,10,30,37, 0,286,508,514,526,574,584,596,626, 62477,62903,63212,63219,63233,63280,63289,63300,63659, 471 0 0 0 0 0 3 1674 - SGN-E336549 471 0 471 C12HBa0020C08.1 80839 11706 13851 4 152,83,84,152, 0,152,235,319, 11706,11993,12438,13699, 354 0 0 0 0 0 0 0 - SGN-E343371 565 182 536 C12HBa0020C08.1 80839 17691 18045 1 354, 29, 17691, 672 4 0 0 5 36 8 715 + SGN-E348646 712 0 712 C12HBa0020C08.1 80839 62942 64333 12 152,6,12,47,9,10,30,113,5,127,84,81, 0,183,189,201,249,259,271,301,414,419,547,631, 62942,63212,63219,63233,63280,63289,63300,63659,63773,63956,64083,64252, 636 0 0 1 2 2 3 3157 + SGN-E339470 639 0 639 C12HBa0020C08.1 80839 41331 45125 6 92,133,215,84,54,59, 0,92,225,441,525,580, 41331,41961,43681,43896,45012,45066, 659 3 0 0 4 4 0 0 - SGN-E341676 666 0 666 C12HBa0020C08.1 80839 35478 36140 5 39,86,485,29,23, 0,40,127,613,643, 35478,35517,35603,36088,36117, 555 5 0 0 0 0 5 700 + SGN-E365538 560 0 560 C12HBa0020C08.1 80839 61466 62726 6 11,66,60,42,50,331, 0,11,77,137,179,229, 61466,61586,61849,62022,62161,62395, 66 2 0 0 0 0 0 0 - SGN-E690632 711 471 539 C12HBa0020C08.1 80839 23123 23191 1 68, 172, 23123, 66 2 0 0 0 0 0 0 - SGN-E694472 710 467 535 C12HBa0020C08.1 80839 23123 23191 1 68, 175, 23123,