psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 551 2 0 0 0 0 3 1058 + SGN-E203384 560 7 560 C12HBa0062P09.1 72046 67770 69381 4 112,91,184,166, 7,119,210,394, 67770,68261,68431,69215, 467 2 0 0 0 0 2 679 - SGN-E203385 490 17 486 C12HBa0062P09.1 72046 68259 69407 3 93,184,192, 4,97,281, 68259,68431,69215, 551 3 0 0 1 2 3 1060 + SGN-E203428 563 7 563 C12HBa0062P09.1 72046 67787 69401 4 95,91,181,187, 7,102,193,376, 67787,68261,68431,69214, 443 1 0 0 0 0 2 679 - SGN-E203429 461 17 461 C12HBa0062P09.1 72046 68304 69427 3 48,184,212, 0,48,232, 68304,68431,69215, 63 1 0 0 2 219 2 94 - SGN-E220300 509 220 503 C12HBa0062P09.1 72046 37762 37920 3 12,36,16, 6,28,273, 37762,37785,37904, 66 5 0 0 0 0 0 0 - SGN-E222838 382 297 368 C12HBa0062P09.1 72046 68535 68606 1 71, 14, 68535, 459 0 0 0 0 0 2 601 - SGN-E234758 478 19 478 C12HBa0062P09.1 72046 68460 69520 3 79,75,305, 0,79,154, 68460,68540,69215, 227 0 0 0 0 0 0 0 - SGN-E235046 244 17 244 C12HBa0062P09.1 72046 69295 69522 1 227, 0, 69295, 496 1 0 0 0 0 3 1058 + SGN-E263570 497 0 497 C12HBa0062P09.1 72046 67778 69333 4 104,91,184,118, 0,104,195,379, 67778,68261,68431,69215, 584 1 0 0 0 0 3 1058 + SGN-E265789 597 0 585 C12HBa0062P09.1 72046 67781 69424 4 101,91,184,209, 0,101,192,376, 67781,68261,68431,69215, 524 1 0 0 0 0 3 1058 + SGN-E267073 525 0 525 C12HBa0062P09.1 72046 67781 69364 4 101,91,184,149, 0,101,192,376, 67781,68261,68431,69215, 66 5 0 0 0 0 0 0 - SGN-E268528 402 316 387 C12HBa0062P09.1 72046 68535 68606 1 71, 15, 68535, 690 1 0 0 0 0 3 1058 + SGN-E271568 700 0 691 C12HBa0062P09.1 72046 67775 69524 4 107,91,184,309, 0,107,198,382, 67775,68261,68431,69215, 520 2 0 0 0 0 3 1058 + SGN-E271727 522 0 522 C12HBa0062P09.1 72046 67785 69365 4 97,91,184,150, 0,97,188,372, 67785,68261,68431,69215, 532 0 0 0 0 0 2 679 - SGN-E275767 536 4 536 C12HBa0062P09.1 72046 68296 69507 3 56,184,292, 0,56,240, 68296,68431,69215, 666 0 0 0 0 0 3 1058 + SGN-E275898 666 0 666 C12HBa0062P09.1 72046 67782 69506 4 100,91,184,291, 0,100,191,375, 67782,68261,68431,69215, 320 3 0 0 0 0 2 458 + SGN-E277180 330 7 330 C12HBa0062P09.1 72046 67787 68568 3 95,91,137, 7,102,193, 67787,68261,68431, 269 4 0 0 1 2 2 458 + SGN-E282572 275 0 275 C12HBa0062P09.1 72046 67785 68516 4 37,60,91,85, 0,39,99,190, 67785,67822,68261,68431, 63 1 0 0 2 220 2 94 - SGN-E289326 471 184 468 C12HBa0062P09.1 72046 37762 37920 3 12,36,16, 3,25,271, 37762,37785,37904, 538 2 0 0 0 0 3 1058 + SGN-E290912 540 0 540 C12HBa0062P09.1 72046 67767 69365 4 115,91,184,150, 0,115,206,390, 67767,68261,68431,69215, 423 0 0 0 1 2 3 1060 + SGN-E294785 425 0 425 C12HBa0062P09.1 72046 67769 69252 4 113,91,181,38, 0,113,204,387, 67769,68261,68431,69214, 506 0 0 0 0 0 3 1058 + SGN-E307866 507 1 507 C12HBa0062P09.1 72046 67777 69341 4 105,91,184,126, 1,106,197,381, 67777,68261,68431,69215, 519 1 0 0 0 0 3 1058 + SGN-E310457 520 0 520 C12HBa0062P09.1 72046 67781 69359 4 101,91,184,144, 0,101,192,376, 67781,68261,68431,69215, 603 0 0 0 0 0 3 1058 + SGN-E310591 603 0 603 C12HBa0062P09.1 72046 67790 69451 4 92,91,184,236, 0,92,183,367, 67790,68261,68431,69215, 668 0 0 0 0 0 3 1058 + SGN-E315265 676 0 668 C12HBa0062P09.1 72046 67781 69507 4 101,91,184,292, 0,101,192,376, 67781,68261,68431,69215, 543 1 0 0 0 0 3 1058 + SGN-E319827 544 0 544 C12HBa0062P09.1 72046 67769 69371 4 113,91,184,156, 0,113,204,388, 67769,68261,68431,69215, 499 0 0 0 0 0 3 1058 + SGN-E319874 499 0 499 C12HBa0062P09.1 72046 67781 69338 4 101,91,184,123, 0,101,192,376, 67781,68261,68431,69215, 574 1 0 0 0 0 4 1059 + SGN-E322609 575 0 575 C12HBa0062P09.1 72046 67772 69406 5 110,91,184,145,45, 0,110,201,385,530, 67772,68261,68431,69215,69361, 633 0 0 1 0 0 3 1058 + SGN-E326149 642 0 634 C12HBa0062P09.1 72046 67765 69457 4 117,91,184,242, 0,117,208,392, 67765,68261,68431,69215, 376 0 0 0 0 0 2 458 + SGN-E340069 391 0 376 C12HBa0062P09.1 72046 67781 68615 3 101,91,184, 0,101,192, 67781,68261,68431, 562 2 0 0 0 0 3 1058 + SGN-E341283 564 0 564 C12HBa0062P09.1 72046 67779 69401 4 103,91,184,186, 0,103,194,378, 67779,68261,68431,69215, 606 1 0 0 0 0 3 1058 + SGN-E341427 631 14 621 C12HBa0062P09.1 72046 67785 69450 4 97,91,184,235, 14,111,202,386, 67785,68261,68431,69215, 38 1 0 0 1 11 0 0 - SGN-E341503 666 189 239 C12HBa0062P09.1 72046 2608 2647 2 18,21, 427,456, 2608,2626, 665 2 0 0 0 0 3 1058 + SGN-E342002 667 0 667 C12HBa0062P09.1 72046 67781 69506 4 101,91,184,291, 0,101,192,376, 67781,68261,68431,69215, 561 1 0 2 1 3 6 1062 + SGN-E343432 567 0 567 C12HBa0062P09.1 72046 67781 69407 7 101,91,184,84,8,50,46, 0,101,192,376,463,471,521, 67781,68261,68431,69215,69301,69310,69361, 658 2 0 1 0 0 3 1058 + SGN-E344231 661 0 661 C12HBa0062P09.1 72046 67781 69500 4 101,91,184,285, 0,101,192,376, 67781,68261,68431,69215, 498 0 0 0 0 0 2 679 + SGN-E345562 505 0 498 C12HBa0062P09.1 72046 68338 69515 3 14,184,300, 0,14,198, 68338,68431,69215, 577 1 0 0 0 0 3 1058 + SGN-E347127 591 0 578 C12HBa0062P09.1 72046 67776 69412 4 106,91,184,197, 0,106,197,381, 67776,68261,68431,69215, 63 1 0 0 2 220 2 94 + SGN-E350803 499 5 289 C12HBa0062P09.1 72046 37762 37920 3 12,36,16, 5,27,273, 37762,37785,37904, 104 9 0 0 0 0 0 0 + SGN-E351900 418 1 114 C12HBa0062P09.1 72046 68493 68606 1 113, 1, 68493, 523 1 0 0 0 0 3 1058 + SGN-E356571 524 0 524 C12HBa0062P09.1 72046 67781 69363 4 101,91,184,148, 0,101,192,376, 67781,68261,68431,69215, 211 1 0 0 0 0 3 459 + SGN-E378482 212 0 212 C12HBa0062P09.1 72046 67844 68515 4 38,91,72,11, 0,38,129,201, 67844,68261,68431,68504, 104 9 0 0 0 0 0 0 - SGN-E397784 522 368 481 C12HBa0062P09.1 72046 68493 68606 1 113, 41, 68493, 31 0 0 0 0 0 0 0 - SGN-E537613 858 8 39 C12HBa0062P09.1 72046 55003 55034 1 31, 819, 55003, 679 0 0 0 0 0 3 1058 + SGN-E711978 698 3 682 C12HBa0062P09.1 72046 67772 69509 4 110,91,184,294, 3,113,204,388, 67772,68261,68431,69215, 629 0 0 0 0 0 3 1058 + SGN-E712499 652 0 629 C12HBa0062P09.1 72046 67763 69450 4 119,91,184,235, 0,119,210,394, 67763,68261,68431,69215, 583 0 0 1 0 0 3 1058 + SGN-E713144 603 0 584 C12HBa0062P09.1 72046 67770 69412 4 112,91,184,197, 0,112,203,387, 67770,68261,68431,69215, 612 0 0 0 0 0 3 1058 + SGN-E713617 627 0 612 C12HBa0062P09.1 72046 67780 69450 4 102,91,184,235, 0,102,193,377, 67780,68261,68431,69215, 34 1 0 0 0 0 0 0 + SGN-E714885 472 326 361 C12HBa0062P09.1 72046 2621 2656 1 35, 326, 2621, 104 9 0 0 0 0 0 0 + SGN-E715303 502 37 150 C12HBa0062P09.1 72046 68493 68606 1 113, 37, 68493, 588 1 0 0 0 0 3 1058 + SGN-E715595 600 0 589 C12HBa0062P09.1 72046 67780 69427 4 102,91,184,212, 0,102,193,377, 67780,68261,68431,69215, 676 1 0 0 0 0 3 1058 + SGN-E716014 690 0 677 C12HBa0062P09.1 72046 67780 69515 4 102,91,184,300, 0,102,193,377, 67780,68261,68431,69215, 589 0 0 0 0 0 3 1058 + SGN-E716396 600 0 589 C12HBa0062P09.1 72046 67780 69427 4 102,91,184,212, 0,102,193,377, 67780,68261,68431,69215, 674 1 0 0 0 0 3 1058 + SGN-E716889 684 0 675 C12HBa0062P09.1 72046 67782 69515 4 100,91,184,300, 0,100,191,375, 67782,68261,68431,69215, 673 1 0 0 0 0 3 1058 + SGN-E716923 674 0 674 C12HBa0062P09.1 72046 67780 69512 4 102,91,184,297, 0,102,193,377, 67780,68261,68431,69215, 701 0 0 0 0 0 3 1058 + SGN-E717461 772 24 725 C12HBa0062P09.1 72046 67748 69507 4 134,91,184,292, 24,158,249,433, 67748,68261,68431,69215, 35 0 0 0 0 0 0 0 + SGN-E720366 621 272 307 C12HBa0062P09.1 72046 55006 55041 1 35, 272, 55006, 104 9 0 0 0 0 0 0 + SGN-E723017 522 38 151 C12HBa0062P09.1 72046 68493 68606 1 113, 38, 68493, 697 2 0 0 0 0 3 1058 + SGN-E723934 764 0 699 C12HBa0062P09.1 72046 67781 69538 4 101,91,184,323, 0,101,192,376, 67781,68261,68431,69215, 590 1 0 1 0 0 3 1058 + SGN-E724903 617 0 592 C12HBa0062P09.1 72046 67777 69427 4 105,91,184,212, 0,105,196,380, 67777,68261,68431,69215, 610 1 0 1 0 0 3 1058 + SGN-E724904 679 1 613 C12HBa0062P09.1 72046 67757 69427 4 125,91,184,212, 1,126,217,401, 67757,68261,68431,69215, 671 2 0 0 0 0 3 1058 + SGN-E734368 688 0 673 C12HBa0062P09.1 72046 67793 69524 4 89,91,184,309, 0,89,180,364, 67793,68261,68431,69215,