psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 224 1 0 0 0 0 1 1 - SGN-E201016 225 0 225 C12HBa0120K04.1 113722 110768 110994 2 15,210, 0,15, 110768,110784, 533 0 0 0 0 0 1 658 - SGN-E201545 533 0 533 C12HBa0120K04.1 113722 111046 112237 2 199,334, 0,199, 111046,111903, 455 0 0 0 0 0 1 658 - SGN-E204651 455 0 455 C12HBa0120K04.1 113722 111208 112321 2 37,418, 0,37, 111208,111903, 492 8 0 0 1 1 0 0 - SGN-E205513 501 0 501 C12HBa0120K04.1 113722 110627 111127 2 183,317, 0,184, 110627,110810, 657 1 0 0 0 0 1 658 - SGN-E205541 658 0 658 C12HBa0120K04.1 113722 111005 112321 2 240,418, 0,240, 111005,111903, 595 0 0 0 0 0 1 658 - SGN-E207541 595 0 595 C12HBa0120K04.1 113722 111068 112321 2 177,418, 0,177, 111068,111903, 626 2 0 0 0 0 1 658 - SGN-E207840 628 0 628 C12HBa0120K04.1 113722 111017 112303 2 228,400, 0,228, 111017,111903, 540 0 0 0 0 0 0 0 - SGN-E208109 540 0 540 C12HBa0120K04.1 113722 110688 111228 1 540, 0, 110688, 548 0 0 0 0 0 0 0 - SGN-E208986 548 0 548 C12HBa0120K04.1 113722 110688 111236 1 548, 0, 110688, 419 0 0 1 0 0 0 0 - SGN-E210281 420 0 420 C12HBa0120K04.1 113722 111902 112322 1 420, 0, 111902, 36 3 0 0 0 0 0 0 + SGN-E211864 671 212 251 C12HBa0120K04.1 113722 109968 110007 1 39, 212, 109968, 31 1 0 0 0 0 0 0 + SGN-E211905 729 595 627 C12HBa0120K04.1 113722 76807 76839 1 32, 595, 76807, 433 0 0 225 0 0 0 0 - SGN-E212922 658 0 658 C12HBa0120K04.1 113722 111361 112019 1 658, 0, 111361, 365 0 0 0 0 0 0 0 - SGN-E212951 365 0 365 C12HBa0120K04.1 113722 111957 112322 1 365, 0, 111957, 575 0 0 0 0 0 1 658 - SGN-E213076 575 0 575 C12HBa0120K04.1 113722 111089 112322 2 156,419, 0,156, 111089,111903, 724 1 0 0 0 0 1 658 - SGN-E213162 725 0 725 C12HBa0120K04.1 113722 110759 112142 2 486,239, 0,486, 110759,111903, 623 0 0 1 0 0 1 658 - SGN-E214249 624 0 624 C12HBa0120K04.1 113722 111031 112313 2 214,410, 0,214, 111031,111903, 647 0 0 0 0 0 1 658 - SGN-E214660 647 0 647 C12HBa0120K04.1 113722 111006 112311 2 239,408, 0,239, 111006,111903, 75 0 0 0 0 0 0 0 + SGN-E214862 369 294 369 C12HBa0120K04.1 113722 110611 110686 1 75, 294, 110611, 299 0 0 0 0 0 0 0 - SGN-E214862 369 0 299 C12HBa0120K04.1 113722 110695 110994 1 299, 70, 110695, 500 0 0 0 0 0 1 658 - SGN-E215083 500 0 500 C12HBa0120K04.1 113722 111163 112321 2 82,418, 0,82, 111163,111903, 35 3 0 0 0 0 0 0 - SGN-E221354 421 28 66 C12HBa0120K04.1 113722 48167 48205 1 38, 355, 48167, 35 1 0 0 0 0 0 0 - SGN-E228103 578 0 36 C12HBa0120K04.1 113722 76815 76851 1 36, 542, 76815, 41 0 0 0 0 0 2 614 + SGN-E228583 459 0 41 C12HBa0120K04.1 113722 53215 53870 3 9,21,11, 0,9,30, 53215,53570,53859, 41 0 0 0 0 0 2 614 + SGN-E229255 475 0 41 C12HBa0120K04.1 113722 53215 53870 3 9,21,11, 0,9,30, 53215,53570,53859, 35 1 0 0 0 0 0 0 - SGN-E231127 559 0 36 C12HBa0120K04.1 113722 76815 76851 1 36, 523, 76815, 68 1 0 0 2 53 3 74 - SGN-E236369 507 176 298 C12HBa0120K04.1 113722 101703 101846 4 14,4,17,34, 209,257,261,297, 101703,101750,101755,101812, 85 2 0 0 0 0 0 0 + SGN-E236516 505 95 182 C12HBa0120K04.1 113722 18080 18167 1 87, 95, 18080, 36 3 0 0 0 0 0 0 - SGN-E238018 602 520 559 C12HBa0120K04.1 113722 109968 110007 1 39, 43, 109968, 35 1 0 0 0 0 0 0 - SGN-E240505 503 0 36 C12HBa0120K04.1 113722 76815 76851 1 36, 467, 76815, 68 1 0 0 2 53 3 74 - SGN-E241175 508 176 298 C12HBa0120K04.1 113722 101703 101846 4 14,4,17,34, 210,258,262,298, 101703,101750,101755,101812, 32 0 0 0 0 0 0 0 + SGN-E243117 581 479 511 C12HBa0120K04.1 113722 76805 76837 1 32, 479, 76805, 36 3 0 0 0 0 0 0 - SGN-E244655 560 321 360 C12HBa0120K04.1 113722 109968 110007 1 39, 200, 109968, 45 2 0 0 0 0 0 0 - SGN-E245109 665 138 185 C12HBa0120K04.1 113722 102662 102709 1 47, 480, 102662, 36 3 0 0 0 0 0 0 + SGN-E245979 566 412 451 C12HBa0120K04.1 113722 109968 110007 1 39, 412, 109968, 668 2 0 0 0 0 1 1657 + SGN-E248723 670 0 670 C12HBa0120K04.1 113722 53126 55453 2 39,631, 0,39, 53126,54822, 36 3 0 0 0 0 0 0 + SGN-E251941 624 451 490 C12HBa0120K04.1 113722 109968 110007 1 39, 451, 109968, 418 1 0 0 0 0 2 2 - SGN-E254547 420 1 420 C12HBa0120K04.1 113722 10340 10761 3 405,6,8, 0,405,411, 10340,10746,10753, 36 3 0 0 0 0 0 0 + SGN-E255192 477 377 416 C12HBa0120K04.1 113722 109968 110007 1 39, 377, 109968, 36 3 0 0 0 0 0 0 + SGN-E255229 652 377 416 C12HBa0120K04.1 113722 109968 110007 1 39, 377, 109968, 36 3 0 0 0 0 0 0 + SGN-E255538 653 377 416 C12HBa0120K04.1 113722 109968 110007 1 39, 377, 109968, 463 0 0 0 0 0 0 0 + SGN-E255962 463 0 463 C12HBa0120K04.1 113722 92390 92853 1 463, 0, 92390, 406 2 0 0 0 0 6 4554 - SGN-E256664 409 0 408 C12HBa0120K04.1 113722 9124 14086 7 47,88,105,39,66,4,59, 1,48,136,241,280,346,350, 9124,9444,9636,9818,11350,11512,14027, 466 0 0 1 0 0 6 7046 - SGN-E256958 467 0 467 C12HBa0120K04.1 113722 9649 17162 7 92,39,65,106,42,78,45, 0,92,131,196,302,344,422, 9649,9818,11350,14022,14214,14933,17117, 408 16 0 0 6 28 8 44 - SGN-E257656 541 88 540 C12HBa0120K04.1 113722 102289 102757 11 25,6,31,86,5,6,93,24,115,18,15, 1,28,34,65,152,159,170,263,304,420,438, 102289,102317,102324,102361,102450,102455,102461,102576,102605,102723,102742, 343 0 0 0 0 0 0 0 + SGN-E257721 361 18 361 C12HBa0120K04.1 113722 101760 102103 1 343, 18, 101760, 390 0 0 0 0 0 5 4554 - SGN-E259000 390 0 390 C12HBa0120K04.1 113722 9142 14086 6 29,88,105,39,65,64, 0,29,117,222,261,326, 9142,9444,9636,9818,11350,14022, 556 0 0 0 0 0 1 647 + SGN-E259511 556 0 556 C12HBa0120K04.1 113722 92390 93593 2 462,94, 0,462, 92390,93499, 572 0 0 0 0 0 0 0 + SGN-E259615 607 32 604 C12HBa0120K04.1 113722 101760 102332 1 572, 32, 101760, 290 18 0 0 2 9 3 194 - SGN-E260038 553 236 553 C12HBa0120K04.1 113722 105263 105765 4 7,188,6,107, 0,7,203,210, 105263,105455,105649,105658, 729 0 0 0 0 0 7 5737 - SGN-E261020 729 0 729 C12HBa0120K04.1 113722 7620 14086 8 39,282,47,88,105,39,65,64, 0,39,321,368,456,561,600,665, 7620,7660,9124,9444,9636,9818,11350,14022, 767 8 0 2 1 1 2 2 - SGN-E262858 778 0 778 C12HBa0120K04.1 113722 9981 10760 4 10,59,62,646, 0,10,70,132, 9981,9992,10051,10114, 758 7 0 1 2 3 2 2 - SGN-E262960 769 0 769 C12HBa0120K04.1 113722 9992 10760 5 55,5,9,51,646, 0,57,63,72,123, 9992,10047,10052,10062,10114, 735 0 0 0 0 0 6 5736 - SGN-E263299 735 0 735 C12HBa0120K04.1 113722 7615 14086 7 327,47,88,105,39,65,64, 0,327,374,462,567,606,671, 7615,9124,9444,9636,9818,11350,14022, 477 0 0 0 0 0 0 0 - SGN-E266168 477 0 477 C12HBa0120K04.1 113722 17219 17696 1 477, 0, 17219, 484 1 0 0 0 0 1 647 + SGN-E269831 485 0 485 C12HBa0120K04.1 113722 92445 93577 2 407,78, 0,407, 92445,93499, 663 0 0 0 0 0 0 0 + SGN-E275436 663 0 663 C12HBa0120K04.1 113722 56065 56728 1 663, 0, 56065, 55 0 0 0 0 0 2 11 + SGN-E283625 481 365 420 C12HBa0120K04.1 113722 76805 76871 3 4,42,9, 365,369,411, 76805,76810,76862, 554 0 0 0 0 0 0 0 - SGN-E300025 554 0 554 C12HBa0120K04.1 113722 17156 17710 1 554, 0, 17156, 357 2 0 0 0 0 0 0 - SGN-E305364 359 0 359 C12HBa0120K04.1 113722 17360 17719 1 359, 0, 17360, 440 0 0 0 0 0 0 0 - SGN-E310360 440 0 440 C12HBa0120K04.1 113722 17274 17714 1 440, 0, 17274, 577 1 0 0 0 0 1 647 + SGN-E311695 578 0 578 C12HBa0120K04.1 113722 92400 93625 2 452,126, 0,452, 92400,93499, 485 13 0 0 1 1 1 647 + SGN-E313660 509 10 509 C12HBa0120K04.1 113722 92410 93555 3 29,413,56, 10,40,453, 92410,92439,93499, 272 9 0 0 0 0 0 0 + SGN-E313663 281 0 281 C12HBa0120K04.1 113722 92413 92694 1 281, 0, 92413, 273 7 0 0 0 0 0 0 + SGN-E313664 280 0 280 C12HBa0120K04.1 113722 92415 92695 1 280, 0, 92415, 584 1 0 0 0 0 2 648 + SGN-E314759 605 0 585 C12HBa0120K04.1 113722 92403 93636 3 449,108,28, 0,449,557, 92403,93499,93608, 431 12 0 0 0 0 0 0 + SGN-E315144 443 0 443 C12HBa0120K04.1 113722 65246 65689 1 443, 0, 65246, 480 3 0 0 0 0 0 0 - SGN-E315963 483 0 483 C12HBa0120K04.1 113722 17216 17699 1 483, 0, 17216, 469 0 0 0 0 0 1 80 - SGN-E316092 469 0 469 C12HBa0120K04.1 113722 26137 26686 2 75,394, 0,75, 26137,26292, 448 0 0 0 0 0 0 0 - SGN-E316599 448 0 448 C12HBa0120K04.1 113722 17267 17715 1 448, 0, 17267, 250 13 0 2 2 33 2 16 - SGN-E320805 440 142 440 C12HBa0120K04.1 113722 102437 102718 3 145,7,113, 0,149,185, 102437,102587,102605, 132 6 0 0 0 0 3 7 - SGN-E322928 409 0 138 C12HBa0120K04.1 113722 25786 25931 4 44,4,37,53, 271,315,319,356, 25786,25831,25840,25878, 419 23 0 0 6 52 7 28 - SGN-E327106 629 135 629 C12HBa0120K04.1 113722 102248 102718 10 9,5,24,25,6,30,93,130,7,113, 0,10,16,56,81,87,117,211,345,381, 102248,102259,102264,102289,102315,102325,102359,102452,102587,102605, 377 2 0 0 1 16 1 15 + SGN-E335449 406 0 395 C12HBa0120K04.1 113722 100546 100940 2 31,348, 0,47, 100546,100592, 331 0 0 0 1 4 1 2 + SGN-E335867 376 0 335 C12HBa0120K04.1 113722 100552 100885 2 323,8, 0,327, 100552,100877, 31 0 0 0 0 0 0 0 + SGN-E346864 703 453 484 C12HBa0120K04.1 113722 76806 76837 1 31, 453, 76806, 473 0 0 111 0 0 0 0 - SGN-E349502 595 0 584 C12HBa0120K04.1 113722 109381 109965 1 584, 11, 109381, 80 7 0 0 0 0 0 0 + SGN-E349529 730 225 312 C12HBa0120K04.1 113722 79509 79596 1 87, 225, 79509, 36 3 0 0 0 0 0 0 - SGN-E349600 629 205 244 C12HBa0120K04.1 113722 109968 110007 1 39, 385, 109968, 36 3 0 0 0 0 0 0 - SGN-E349673 709 287 326 C12HBa0120K04.1 113722 109968 110007 1 39, 383, 109968, 36 3 0 0 0 0 0 0 - SGN-E349855 629 205 244 C12HBa0120K04.1 113722 109968 110007 1 39, 385, 109968, 31 0 0 0 0 0 0 0 + SGN-E349972 833 796 827 C12HBa0120K04.1 113722 76806 76837 1 31, 796, 76806, 32 0 0 0 0 0 0 0 - SGN-E349972 833 801 833 C12HBa0120K04.1 113722 76805 76837 1 32, 0, 76805, 36 3 0 0 0 0 0 0 - SGN-E350199 609 257 296 C12HBa0120K04.1 113722 109968 110007 1 39, 313, 109968, 155 0 0 111 0 0 0 0 - SGN-E350480 287 0 266 C12HBa0120K04.1 113722 109387 109653 1 266, 21, 109387, 36 3 0 0 0 0 0 0 - SGN-E350957 627 205 244 C12HBa0120K04.1 113722 109968 110007 1 39, 383, 109968, 36 3 0 0 0 0 0 0 - SGN-E352348 631 393 432 C12HBa0120K04.1 113722 109968 110007 1 39, 199, 109968, 421 1 0 0 0 0 0 0 + SGN-E352443 430 0 422 C12HBa0120K04.1 113722 1109 1531 1 422, 0, 1109, 421 1 0 0 0 0 0 0 + SGN-E354213 430 0 422 C12HBa0120K04.1 113722 1109 1531 1 422, 0, 1109, 421 1 0 0 0 0 0 0 + SGN-E354892 430 0 422 C12HBa0120K04.1 113722 1109 1531 1 422, 0, 1109, 236 14 0 0 0 0 0 0 - SGN-E355886 581 246 496 C12HBa0120K04.1 113722 107474 107724 1 250, 85, 107474, 236 14 0 0 0 0 0 0 - SGN-E355888 538 248 498 C12HBa0120K04.1 113722 107474 107724 1 250, 40, 107474, 455 7 0 0 0 0 0 0 - SGN-E358399 462 0 462 C12HBa0120K04.1 113722 17272 17734 1 462, 0, 17272, 34 0 0 0 0 0 0 0 + SGN-E367848 664 158 192 C12HBa0120K04.1 113722 42378 42412 1 34, 158, 42378, 611 0 0 0 3 3 1 62 - SGN-E368232 619 5 619 C12HBa0120K04.1 113722 102174 102847 5 7,32,15,42,515, 0,7,40,56,99, 102174,102243,102275,102290,102332, 540 0 0 0 0 0 2 3166 - SGN-E368319 547 7 547 C12HBa0120K04.1 113722 93592 97298 3 44,72,424, 0,44,116, 93592,96707,96874, 528 0 0 0 0 0 1 647 + SGN-E368320 528 0 528 C12HBa0120K04.1 113722 92390 93565 2 462,66, 0,462, 92390,93499, 532 1 0 0 1 1 3 1559 + SGN-E368852 566 14 548 C12HBa0120K04.1 113722 7609 9701 5 333,47,88,54,11, 14,347,394,482,537, 7609,9124,9444,9636,9690, 451 1 0 0 1 1 6 5736 - SGN-E368853 453 0 453 C12HBa0120K04.1 113722 7898 14086 8 19,25,47,88,105,39,65,64, 0,20,45,92,180,285,324,389, 7898,7917,9124,9444,9636,9818,11350,14022, 387 5 0 111 0 0 0 0 + SGN-E374659 511 8 511 C12HBa0120K04.1 113722 109381 109884 1 503, 8, 109381, 651 3 0 0 0 0 1 658 - SGN-E374660 654 0 654 C12HBa0120K04.1 113722 111009 112321 2 236,418, 0,236, 111009,111903, 35 3 0 0 0 0 0 0 + SGN-E374918 717 638 676 C12HBa0120K04.1 113722 48167 48205 1 38, 638, 48167, 40 0 0 0 0 0 2 11 - SGN-E376541 620 13 53 C12HBa0120K04.1 113722 76781 76832 3 8,5,27, 567,575,580, 76781,76793,76805, 54 1 0 0 1 19 2 41 - SGN-E377089 588 176 250 C12HBa0120K04.1 113722 101750 101846 3 4,17,34, 338,342,378, 101750,101755,101812, 54 1 0 0 1 19 2 41 - SGN-E378515 771 170 244 C12HBa0120K04.1 113722 101750 101846 3 4,17,34, 527,531,567, 101750,101755,101812, 45 0 0 0 1 9 1 151 + SGN-E378518 860 636 690 C12HBa0120K04.1 113722 39988 40184 2 16,29, 636,661, 39988,40155, 33 0 0 0 0 0 0 0 - SGN-E378756 718 392 425 C12HBa0120K04.1 113722 76804 76837 1 33, 293, 76804, 80 7 0 0 0 0 0 0 + SGN-E392483 646 312 399 C12HBa0120K04.1 113722 79509 79596 1 87, 312, 79509, 31 0 0 0 0 0 0 0 - SGN-E395485 596 204 235 C12HBa0120K04.1 113722 76806 76837 1 31, 361, 76806, 36 3 0 0 0 0 0 0 + SGN-E537970 597 378 417 C12HBa0120K04.1 113722 109968 110007 1 39, 378, 109968, 36 3 0 0 0 0 0 0 - SGN-E539490 795 674 713 C12HBa0120K04.1 113722 109968 110007 1 39, 82, 109968, 32 0 0 0 0 0 0 0 - SGN-E547738 482 87 119 C12HBa0120K04.1 113722 76807 76839 1 32, 363, 76807, 46 0 0 0 0 0 1 1 + SGN-E548262 638 366 412 C12HBa0120K04.1 113722 76805 76852 2 4,42, 366,370, 76805,76810, 301 20 0 0 2 9 2 9 - SGN-E551070 568 237 567 C12HBa0120K04.1 113722 105435 105765 3 208,6,107, 1,217,224, 105435,105649,105658, 385 0 0 0 0 0 0 0 + SGN-E551881 511 0 385 C12HBa0120K04.1 113722 96888 97273 1 385, 0, 96888, 307 21 0 0 2 9 2 9 - SGN-E688858 575 237 574 C12HBa0120K04.1 113722 105428 105765 3 215,6,107, 1,224,231, 105428,105649,105658, 36 3 0 0 0 0 0 0 - SGN-E689376 619 400 439 C12HBa0120K04.1 113722 109968 110007 1 39, 180, 109968, 34 0 0 0 0 0 0 0 - SGN-E690632 712 510 544 C12HBa0120K04.1 113722 42378 42412 1 34, 168, 42378, 34 0 0 0 0 0 0 0 + SGN-E694472 711 170 204 C12HBa0120K04.1 113722 42378 42412 1 34, 170, 42378, 479 0 0 0 0 0 0 0 - SGN-E697159 479 0 479 C12HBa0120K04.1 113722 17269 17748 1 479, 0, 17269, 36 3 0 0 0 0 0 0 - SGN-E699884 838 415 454 C12HBa0120K04.1 113722 109968 110007 1 39, 384, 109968, 36 3 0 0 0 0 0 0 - SGN-E700308 864 607 646 C12HBa0120K04.1 113722 109968 110007 1 39, 218, 109968, 36 3 0 0 0 0 0 0 - SGN-E703993 913 532 571 C12HBa0120K04.1 113722 109968 110007 1 39, 342, 109968, 36 3 0 0 0 0 0 0 - SGN-E704014 898 532 571 C12HBa0120K04.1 113722 109968 110007 1 39, 327, 109968, 36 3 0 0 0 0 0 0 - SGN-E707270 891 771 810 C12HBa0120K04.1 113722 109968 110007 1 39, 81, 109968, 36 3 0 0 0 0 0 0 - SGN-E715605 601 153 192 C12HBa0120K04.1 113722 109968 110007 1 39, 409, 109968, 36 3 0 0 0 0 0 0 - SGN-E716232 878 390 429 C12HBa0120K04.1 113722 109968 110007 1 39, 449, 109968, 602 1 0 0 1 1 5 3394 + SGN-E717974 668 21 625 C12HBa0120K04.1 113722 85543 89540 6 16,143,44,109,56,235, 21,38,181,225,334,390, 85543,85561,87499,88839,89137,89305, 40 1 0 0 0 0 1 50 - SGN-E719818 609 461 502 C12HBa0120K04.1 113722 112868 112959 2 22,19, 107,129, 112868,112940,