psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 32 0 0 0 0 0 0 0 + SGN-U563665 886 65 97 C12HBa0004A15.3 117097 913 945 1 32, 65, 913, 718 7 0 0 0 0 2 163 - SGN-U564807 737 4 729 C12HBa0004A15.3 117097 104100 104988 3 403,255,67, 8,411,666, 104100,104596,104921, 621 51 0 0 1 16 3 169 - SGN-U564807 737 4 692 C12HBa0004A15.3 117097 96905 97746 4 84,279,242,67, 45,129,424,666, 96905,96997,97367,97679, 817 1 0 0 1 1 8 7162 - SGN-U568128 827 8 827 C12HBa0004A15.3 117097 49274 57254 9 16,81,172,79,100,112,130,56,72, 0,17,98,270,349,449,561,691,747, 49274,49420,49609,49877,52254,54618,54989,56775,57182, 30 0 0 0 0 0 0 0 - SGN-U568142 907 810 840 C12HBa0004A15.3 117097 83537 83567 1 30, 67, 83537, 60 0 0 0 0 0 0 0 - SGN-U568431 896 0 60 C12HBa0004A15.3 117097 0 60 1 60, 836, 0, 916 3 0 0 1 1 4 1797 + SGN-U568593 920 0 920 C12HBa0004A15.3 117097 89049 91765 6 349,110,57,300,99,4, 0,349,459,516,816,916, 89049,90724,90916,91054,91662,91761, 653 0 0 0 0 0 0 0 + SGN-U570973 679 26 679 C12HBa0004A15.3 117097 24108 24761 1 653, 26, 24108, 1048 1 0 0 0 0 3 1884 + SGN-U571090 1049 0 1049 C12HBa0004A15.3 117097 91812 94745 4 80,307,274,388, 0,80,387,661, 91812,92312,92728,94357, 96 3 0 0 1 3 1 10 + SGN-U571091 1388 1286 1388 C12HBa0004A15.3 117097 94689 94798 3 6,44,49, 1286,1295,1339, 94689,94695,94749, 655 1 0 0 0 0 1 1 - SGN-U571430 656 0 656 C12HBa0004A15.3 117097 114542 115199 2 21,635, 0,21, 114542,114564, 603 1 0 0 0 0 1 2390 - SGN-U571431 911 307 911 C12HBa0004A15.3 117097 114103 117097 2 518,86, 0,518, 114103,117011, 38 0 0 0 1 1 0 0 + SGN-U572246 401 337 376 C12HBa0004A15.3 117097 909 947 2 4,34, 337,342, 909,913, 47 1 0 0 1 2 1 5 - SGN-U573941 984 716 766 C12HBa0004A15.3 117097 83532 83585 3 6,32,10, 218,226,258, 83532,83538,83575, 2249 17 0 0 0 0 11 1606 - SGN-U574714 2266 0 2266 C12HBa0004A15.3 117097 106061 109933 12 141,161,317,282,393,54,74,3,160,174,121,386, 0,141,302,619,901,1294,1348,1422,1425,1585,1759,1880, 106061,106286,106542,106955,107319,107808,107923,107999,108341,108643,108905,109547, 2054 136 0 0 6 72 10 1660 - SGN-U574714 2266 0 2262 C12HBa0004A15.3 117097 98819 102669 13 136,163,275,240,39,393,54,78,149,174,121,289,79, 4,141,314,619,862,901,1294,1348,1436,1585,1759,1880,2187, 98819,99026,99309,99711,99951,100083,100559,100683,100908,101237,101496,102301,102590, 1288 2 0 0 0 0 1 87 + SGN-U574775 1298 0 1290 C12HBa0004A15.3 117097 76812 78189 2 13,1277, 0,13, 76812,76912, 63 1 0 0 2 23 3 17 + SGN-U574777 1643 45 132 C12HBa0004A15.3 117097 83104 83185 4 22,10,23,9, 45,67,96,123, 83104,83128,83145,83176, 1565 17 0 0 2 49 5 274 - SGN-U574777 1643 5 1636 C12HBa0004A15.3 117097 71839 73695 7 38,3,18,1281,76,29,137, 7,46,49,67,1396,1472,1501, 71839,71877,71899,72017,73349,73429,73558, 122 9 0 0 0 0 0 0 - SGN-U574779 138 7 138 C12HBa0004A15.3 117097 78058 78189 1 131, 0, 78058, 41 0 0 0 1 6 1 1 - SGN-U576609 516 412 459 C12HBa0004A15.3 117097 904 946 2 8,33, 57,71, 904,913, 2284 0 0 0 1 1 15 7238 + SGN-U577307 2286 1 2286 C12HBa0004A15.3 117097 26685 36207 17 380,129,74,70,56,72,95,67,130,219,137,175,91,158,189,17,225, 1,381,510,584,654,710,782,877,944,1074,1293,1430,1605,1696,1854,2043,2061, 26685,28091,28330,28489,30421,30632,30851,31029,31182,31421,31728,33756,34199,34494,35517,35965,35982, 594 1 0 0 0 0 0 0 - SGN-U577341 595 0 595 C12HBa0004A15.3 117097 66794 67389 1 595, 0, 66794, 2039 2 0 0 0 0 9 881 - SGN-U577635 2046 0 2041 C12HBa0004A15.3 117097 65288 68210 10 336,174,102,204,108,382,220,233,212,70, 5,341,515,617,821,929,1311,1531,1764,1976, 65288,65708,65968,66164,66507,66688,67152,67442,67760,68140, 34 0 0 0 0 0 1 1 - SGN-U577827 549 356 390 C12HBa0004A15.3 117097 61880 61915 2 4,30, 159,163, 61880,61885, 31 0 0 0 0 0 0 0 + SGN-U580119 879 70 101 C12HBa0004A15.3 117097 909 940 1 31, 70, 909, 1090 1 0 0 4 4 5 1785 - SGN-U582652 1095 0 1095 C12HBa0004A15.3 117097 18589 21465 9 53,17,4,114,37,71,100,38,657, 0,54,72,77,191,229,300,400,438, 18589,18642,18741,18745,18942,18979,20306,20499,20808, 1480 1 0 0 0 0 10 1368 - SGN-U582753 1484 3 1484 C12HBa0004A15.3 117097 14681 17530 11 439,104,70,44,105,89,88,87,69,330,56, 0,439,543,613,657,762,851,939,1026,1095,1425, 14681,15545,15742,15917,16034,16226,16498,16678,16846,17014,17474, 423 0 0 0 0 0 0 0 + SGN-U582754 640 0 423 C12HBa0004A15.3 117097 14613 15036 1 423, 0, 14613, 99 5 0 0 1 5 2 16 + SGN-U583016 1300 1099 1208 C12HBa0004A15.3 117097 79613 79733 3 11,69,24, 1099,1115,1184, 79613,79639,79709, 34 1 0 0 0 0 0 0 - SGN-U583435 687 208 243 C12HBa0004A15.3 117097 83534 83569 1 35, 444, 83534, 609 1 0 9 1 2 3 166 + SGN-U585357 630 9 630 C12HBa0004A15.3 117097 61524 62309 4 306,236,69,8, 9,315,551,622, 61524,61913,62231,62301, 33 0 0 0 0 0 0 0 + SGN-U585636 686 524 557 C12HBa0004A15.3 117097 912 945 1 33, 524, 912, 40 1 0 0 1 9 0 0 + SGN-U586926 532 43 93 C12HBa0004A15.3 117097 911 952 2 32,9, 43,84, 911,943, 32 0 0 0 0 0 0 0 - SGN-U586926 532 45 77 C12HBa0004A15.3 117097 911 943 1 32, 455, 911, 64 1 0 0 0 0 0 0 + SGN-U588608 281 167 232 C12HBa0004A15.3 117097 88489 88554 1 65, 167, 88489, 264 8 0 0 0 0 0 0 - SGN-U588608 281 6 278 C12HBa0004A15.3 117097 77918 78190 1 272, 3, 77918, 45 1 0 0 0 0 1 5 - SGN-U588612 735 22 68 C12HBa0004A15.3 117097 83534 83585 2 36,10, 667,703, 83534,83575, 170 12 0 0 0 0 0 0 + SGN-U589762 197 15 197 C12HBa0004A15.3 117097 104104 104286 1 182, 15, 104104, 30 0 0 0 0 0 0 0 + SGN-U590148 143 0 30 C12HBa0004A15.3 117097 912 942 1 30, 0, 912, 36 0 0 0 1 1 0 0 - SGN-U590678 344 104 141 C12HBa0004A15.3 117097 908 944 2 4,32, 203,208, 908,912, 364 7 0 0 1 15 1 259 + SGN-U591381 691 6 392 C12HBa0004A15.3 117097 35593 36223 3 113,109,149, 6,119,243, 35593,35965,36074, 361 9 0 0 1 7 2 204 + SGN-U592207 382 1 378 C12HBa0004A15.3 117097 31189 31763 3 123,212,35, 1,124,343, 31189,31421,31728, 32 0 0 0 0 0 0 0 - SGN-U598348 634 552 584 C12HBa0004A15.3 117097 912 944 1 32, 50, 912, 32 0 0 0 0 0 1 1 - SGN-U599271 592 262 294 C12HBa0004A15.3 117097 913 946 2 5,27, 298,303, 913,919, 46 1 0 0 0 0 1 417 + SGN-U599591 660 263 310 C12HBa0004A15.3 117097 912 1376 2 31,16, 263,294, 912,1360, 414 16 0 0 0 0 3 156 - SGN-U600952 430 0 430 C12HBa0004A15.3 117097 98235 98821 4 129,122,53,126, 0,129,251,304, 98235,98443,98566,98695, 399 27 0 0 1 4 3 149 - SGN-U600952 430 0 430 C12HBa0004A15.3 117097 105492 106067 4 129,118,53,126, 0,129,251,304, 105492,105689,105812,105941, 36 0 0 0 1 1 0 0 + SGN-U603207 704 460 497 C12HBa0004A15.3 117097 909 945 2 4,32, 460,465, 909,913, 37 0 0 0 1 1 1 19 + SGN-U603225 725 526 564 C12HBa0004A15.3 117097 61847 61903 3 8,6,23, 526,534,541, 61847,61874,61880, 738 2 0 0 0 0 0 0 - SGN-U604720 740 0 740 C12HBa0004A15.3 117097 59793 60533 1 740, 0, 59793,