psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 501 2 0 0 0 0 3 492 - SGN-U313116 583 0 503 C12HBa0131G17.1 101642 95626 96621 4 265,116,79,43, 80,345,461,540, 95626,96155,96368,96578, 1572 0 0 0 1 1 16 4437 - SGN-U313117 1685 92 1665 C12HBa0131G17.1 101642 95633 101642 18 131,127,116,79,91,79,88,132,75,77,89,39,74,93,98,73,82,29, 20,152,279,395,474,565,644,732,864,939,1016,1105,1144,1218,1311,1409,1482,1564, 95633,95764,96155,96368,96578,96745,96916,97227,97887,98201,98405,98862,99014,99388,99704,101032,101407,101613, 562 21 0 0 1 19 5 13115 - SGN-U314320 3584 2490 3092 C12HBa0131G17.1 101642 22704 36402 6 24,151,84,81,178,65, 492,535,686,770,851,1029, 22704,34796,35316,35637,36082,36337, 283 15 0 0 0 0 2 26029 + SGN-U314334 1410 38 336 C12HBa0131G17.1 101642 9393 35720 3 131,84,83, 38,169,253, 9393,35316,35637, 156 11 0 0 0 0 1 13950 + SGN-U314334 1410 169 336 C12HBa0131G17.1 101642 10077 24194 2 84,83, 169,253, 10077,24111, 100 5 0 0 0 0 0 0 + SGN-U314334 1410 64 169 C12HBa0131G17.1 101642 34842 34947 1 105, 64, 34842, 1590 3 0 0 0 0 11 1914 - SGN-U314335 1598 5 1598 C12HBa0131G17.1 101642 9254 12761 12 270,165,178,144,47,57,99,123,120,114,189,87, 0,270,435,613,757,804,861,960,1083,1203,1317,1506, 9254,10077,10691,10950,11178,11318,11500,11695,11899,12115,12327,12674, 1513 2 0 0 0 0 9 2100 + SGN-U320181 1528 0 1515 C12HBa0131G17.1 101642 85212 88827 10 157,138,144,123,96,138,101,120,100,398, 0,157,295,439,562,658,796,897,1017,1117, 85212,85442,85952,86263,86505,86751,86968,87688,87886,88429, 710 0 0 0 0 0 7 4608 - SGN-U321867 754 0 710 C12HBa0131G17.1 101642 2347 7665 8 162,58,88,46,36,72,113,135, 44,206,264,352,398,434,506,619, 2347,2626,3364,3786,4476,4898,5537,7530, 680 0 0 0 0 0 7 4608 - SGN-U321868 680 0 680 C12HBa0131G17.1 101642 2350 7638 8 159,58,88,46,36,72,113,108, 0,159,217,305,351,387,459,572, 2350,2626,3364,3786,4476,4898,5537,7530, 83 4 0 0 0 0 1 4 + SGN-U322569 1190 935 1022 C12HBa0131G17.1 101642 28900 28991 2 59,28, 935,994, 28900,28963, 30 0 0 0 0 0 0 0 + SGN-U324032 1022 117 147 C12HBa0131G17.1 101642 73227 73257 1 30, 117, 73227, 1044 1 0 0 0 0 9 3645 + SGN-U328926 1045 0 1045 C12HBa0131G17.1 101642 79224 83914 10 31,93,114,171,56,73,191,127,78,111, 0,31,124,238,409,465,538,729,856,934, 79224,80532,80708,80962,81238,81374,81545,81840,82100,83803, 600 0 0 1 0 0 0 0 + SGN-U329487 601 0 601 C12HBa0131G17.1 101642 52431 53032 1 601, 0, 52431, 116 7 0 1 1 10 1 6 + SGN-U329487 601 462 596 C12HBa0131G17.1 101642 53443 53573 2 20,104, 462,492, 53443,53469, 58 2 0 0 0 0 0 0 + SGN-U330407 923 755 815 C12HBa0131G17.1 101642 16195 16255 1 60, 755, 16195, 451 14 0 0 0 0 2 1276 - SGN-U330521 478 0 465 C12HBa0131G17.1 101642 22262 24003 3 162,257,46, 13,175,432, 22262,22669,23957, 429 0 0 0 0 0 0 0 - SGN-U330527 445 0 429 C12HBa0131G17.1 101642 46033 46462 1 429, 16, 46033, 38 1 0 0 0 0 0 0 + SGN-U332831 614 0 39 C12HBa0131G17.1 101642 30172 30211 1 39, 0, 30172, 45 1 0 0 1 11 3 16 - SGN-U333886 586 93 150 C12HBa0131G17.1 101642 1642 1704 4 5,8,24,9, 436,441,449,484, 1642,1648,1670,1695, 378 18 0 0 2 29 5 2197 - SGN-U334156 425 0 425 C12HBa0131G17.1 101642 98882 101475 6 19,46,92,98,73,68, 0,40,94,186,284,357, 98882,99035,99389,99704,101032,101407, 304 1 0 5 0 0 3 391 - SGN-U334157 321 11 321 C12HBa0131G17.1 101642 96660 97361 4 9,79,88,134, 0,9,88,176, 96660,96745,96916,97227, 533 3 0 0 0 0 0 0 - SGN-U334158 543 7 543 C12HBa0131G17.1 101642 96662 97198 1 536, 0, 96662, 542 1 0 0 0 0 7 2880 - SGN-U334159 558 15 558 C12HBa0131G17.1 101642 98219 101642 8 59,89,39,74,98,73,82,29, 0,59,148,187,261,359,432,514, 98219,98405,98862,99014,99704,101032,101407,101613, 110 2 0 0 0 0 1 124 - SGN-U334160 187 15 127 C12HBa0131G17.1 101642 101406 101642 2 83,29, 60,143, 101406,101613, 250 1 0 0 1 1 6 320 - SGN-U334161 344 92 344 C12HBa0131G17.1 101642 96790 97361 8 34,88,60,41,11,6,6,5, 0,34,122,183,224,235,241,247, 96790,96916,97227,97287,97330,97342,97349,97356, 474 0 0 0 1 2 4 1018 - SGN-U334162 476 0 476 C12HBa0131G17.1 101642 98253 99745 6 25,89,226,41,52,41, 0,25,114,340,383,435, 98253,98405,98862,99388,99429,99704, 874 15 0 0 0 0 6 1491 - SGN-U338582 893 4 893 C12HBa0131G17.1 101642 37394 39774 7 112,114,189,148,85,198,43, 0,112,226,415,563,648,846, 37394,37696,37907,38278,38618,39158,39731, 50 0 0 0 1 8 3 272 + SGN-U339036 534 437 495 C12HBa0131G17.1 101642 1372 1694 4 10,9,7,24, 437,447,456,471, 1372,1398,1410,1670, 38 0 0 0 0 0 0 0 + SGN-U340175 540 133 171 C12HBa0131G17.1 101642 73207 73245 1 38, 133, 73207, 42 0 0 0 0 0 0 0 + SGN-U342192 493 421 463 C12HBa0131G17.1 101642 73212 73254 1 42, 421, 73212, 591 37 0 0 2 15 5 16 - SGN-U342203 715 2 645 C12HBa0131G17.1 101642 17152 17796 6 88,4,214,4,11,307, 70,168,172,391,395,406, 17152,17249,17254,17472,17477,17489, 74 4 0 0 1 1 1 2 - SGN-U342407 734 0 79 C12HBa0131G17.1 101642 90991 91071 2 14,64, 655,670, 90991,91007, 1650 0 0 0 0 0 10 10585 + SGN-U342419 1776 1 1651 C12HBa0131G17.1 101642 58326 70561 11 379,96,75,105,111,160,86,123,231,90,194, 1,380,476,551,656,767,927,1013,1136,1367,1457, 58326,59356,61529,64120,64309,64837,66023,66673,66872,69387,70367, 44 0 0 0 1 1 1 2 - SGN-U342742 840 701 746 C12HBa0131G17.1 101642 73207 73253 2 10,34, 94,105, 73207,73219, 898 2 0 1 0 0 3 3252 + SGN-U343284 906 5 906 C12HBa0131G17.1 101642 52989 57142 4 114,76,116,595, 5,119,195,311, 52989,54961,55127,56547, 142 9 0 0 0 0 1 3 - SGN-U344226 460 75 226 C12HBa0131G17.1 101642 28840 28994 2 55,96, 234,289, 28840,28898,