##gff-version 3 # This output was generated with AUGUSTUS (version 2.0.2). # AUGUSTUS is a gene prediction tool for eukaryotes written by Mario Stanke (mstanke@gwdg.de). # Please cite: Mario Stanke and Stephan Waack (2003) "Gene prediction with a hidden Markov model and # a new intron submodel", Bioinformatics, Vol. 19 Suppl. 2, ii215-ii225 # reading in the file /tmp/bac-submission-temp-C12HBa0165F06-Jl4Js/AUGUSTUS_tom_ugs/hints.gff ... # Sources of extrinsic information: M E # Have extrinsic information about 1 sequences (in the specified range). # Initialising the parameters ... # human version. Use default transition matrix. # Looks like /tmp/bac-submission-temp-C12HBa0165F06-Jl4Js/AUGUSTUS_tom_ugs/seq_with_defline_removed is in fasta format. # We have hints for 1 sequence and for 1 of the sequences in the input set. # # ----- prediction on sequence number 1 (length = 120484, name = C12HBa0165F06.1) ----- # # Set orientation to reverse for hint group HintGroup SGN-U341412, 1827-2842, priority= 4 3 features # Delete group HintGroup SGN-U314710, 18234-91913, priority= 4 4 features # Delete group HintGroup SGN-U316749, 18235-91514, priority= 4 3 features # Set orientation to forward for hint group HintGroup SGN-U325887, 19101-21262, priority= 4 9 features # Set orientation to forward for hint group HintGroup SGN-U341066, 21361-23031, priority= 4 5 features # Delete group HintGroup SGN-U337828, 28939-79912, priority= 4 5 features # Delete group HintGroup SGN-U318086, 28940-79763, priority= 4 7 features # Delete group HintGroup SGN-U321738, 28957-91797, priority= 4 4 features # Set orientation to forward for hint group HintGroup SGN-U346649, 29167-30393, priority= 4 3 features # Set orientation to reverse for hint group HintGroup SGN-U318876, 33528-38101, priority= 4 11 features # Set orientation to forward for hint group HintGroup SGN-U344695, 39544-40781, priority= 4 7 features # Delete group HintGroup SGN-U319981, 74731-117859, priority= 4 3 features # Set orientation to reverse for hint group HintGroup SGN-U325341, 77175-79248, priority= 4 11 features # Delete group HintGroup SGN-U322533, 79569-79731, priority= 4 3 features # Delete group HintGroup SGN-U321239, 79569-79732, priority= 4 3 features # Delete group HintGroup SGN-U335360, 79569-79734, priority= 4 3 features # Delete group HintGroup SGN-U338804, 79570-91611, priority= 4 4 features # Delete group HintGroup SGN-U321517, 79570-91529, priority= 4 6 features # Delete group HintGroup SGN-U312769, 79570-91529, priority= 4 6 features # Delete group HintGroup SGN-U325723, 79570-79736, priority= 4 3 features # Delete group HintGroup SGN-U345656, 79570-91529, priority= 4 5 features # Delete group HintGroup SGN-U314595, 79571-79742, priority= 4 3 features # Delete group HintGroup SGN-U327091, 79571-79732, priority= 4 3 features # Delete group HintGroup SGN-U328919, 79571-91852, priority= 4 6 features # Delete group HintGroup SGN-U339989, 79571-79734, priority= 4 3 features # Delete group HintGroup SGN-U341162, 79571-79734, priority= 4 3 features # Delete group HintGroup SGN-U313670, 79571-79735, priority= 4 3 features # Delete group HintGroup SGN-U320485, 79571-79735, priority= 4 3 features # Delete group HintGroup SGN-U343523, 79571-79735, priority= 4 3 features # Delete group HintGroup SGN-U343876, 79571-91797, priority= 4 4 features # Delete group HintGroup SGN-U331462, 79572-79738, priority= 4 3 features # Delete group HintGroup SGN-U313782, 79572-79738, priority= 4 5 features # Delete group HintGroup SGN-U344965, 79572-79738, priority= 4 5 features # Delete group HintGroup SGN-U341145, 79572-79733, priority= 4 3 features # Delete group HintGroup SGN-U314433, 79572-79735, priority= 4 3 features # Delete group HintGroup SGN-U330728, 79572-79737, priority= 4 3 features # Delete group HintGroup SGN-U315322, 79572-79739, priority= 4 3 features # Delete group HintGroup SGN-U341491, 79572-79926, priority= 4 5 features # Delete group HintGroup SGN-U338859, 79573-91511, priority= 4 4 features # Delete group HintGroup SGN-U326537, 79573-79732, priority= 4 3 features # Delete group HintGroup SGN-U328552, 79573-79737, priority= 4 3 features # Delete group HintGroup SGN-U325395, 79573-79753, priority= 4 3 features # Delete group HintGroup SGN-U333790, 79573-79757, priority= 4 3 features # Delete group HintGroup SGN-U345148, 79573-91797, priority= 4 4 features # Delete group HintGroup SGN-U339835, 79573-91511, priority= 4 6 features # Delete group HintGroup SGN-U334113, 79573-91529, priority= 4 3 features # Delete group HintGroup SGN-U312348, 79573-79914, priority= 4 7 features # Delete group HintGroup SGN-U313370, 79573-79739, priority= 4 3 features # Delete group HintGroup SGN-U334771, 79573-79757, priority= 4 3 features # Delete group HintGroup SGN-U322600, 79573-79951, priority= 4 5 features # Delete group HintGroup SGN-U314572, 79573-91952, priority= 4 6 features # Delete group HintGroup SGN-U334457, 79573-91800, priority= 4 4 features # Delete group HintGroup SGN-U334449, 79573-79737, priority= 4 3 features # Delete group HintGroup SGN-U320354, 79573-79716, priority= 4 3 features # Delete group HintGroup SGN-U341371, 79574-79732, priority= 4 3 features # Delete group HintGroup SGN-U316592, 79575-79731, priority= 4 3 features # Delete group HintGroup SGN-U334274, 79575-91508, priority= 4 5 features # Delete group HintGroup SGN-U336354, 79578-91529, priority= 4 3 features # Delete group HintGroup SGN-U330871, 79580-91796, priority= 4 10 features # Delete group HintGroup SGN-U343571, 79731-79912, priority= 4 3 features # Delete group HintGroup SGN-U324118, 79731-91628, priority= 4 5 features # Delete group HintGroup SGN-U336859, 79732-91941, priority= 4 6 features # Delete group HintGroup SGN-U313977, 79735-91884, priority= 4 4 features # Delete group HintGroup SGN-U346924, 79737-91820, priority= 4 4 features # Delete group HintGroup SGN-U332637, 79738-79926, priority= 4 3 features # Delete group HintGroup SGN-U312998, 79739-91796, priority= 4 5 features # Delete group HintGroup SGN-U315207, 79739-91869, priority= 4 10 features # Delete group HintGroup SGN-U312856, 79740-91505, priority= 4 3 features # Delete group HintGroup SGN-U314643, 79740-79926, priority= 4 3 features # Delete group HintGroup SGN-U339094, 79740-91527, priority= 4 3 features # Delete group HintGroup SGN-U314759, 79740-91953, priority= 4 6 features # Delete group HintGroup SGN-U339014, 79740-91950, priority= 4 5 features # Delete group HintGroup SGN-U338951, 79741-91512, priority= 4 4 features # Delete group HintGroup SGN-U315541, 79745-91797, priority= 4 4 features # Delete group HintGroup SGN-U322124, 91293-91813, priority= 4 3 features # Delete group HintGroup SGN-U312577, 91374-91883, priority= 4 5 features # Delete group HintGroup SGN-U344216, 91409-91902, priority= 4 5 features # Delete group HintGroup SGN-U334862, 91430-91614, priority= 4 4 features # Delete group HintGroup SGN-U324128, 91432-91510, priority= 4 3 features # Delete group HintGroup SGN-U333472, 91500-91851, priority= 4 3 features # Delete group HintGroup SGN-U315914, 91503-91874, priority= 4 4 features # Delete group HintGroup SGN-U316948, 91504-91852, priority= 4 3 features # Delete group HintGroup SGN-U314677, 91504-91877, priority= 4 4 features # Delete group HintGroup SGN-U324320, 91504-91882, priority= 4 4 features # Delete group HintGroup SGN-U332785, 91504-91874, priority= 4 4 features # Delete group HintGroup SGN-U345582, 91504-91879, priority= 4 4 features # Delete group HintGroup SGN-U339173, 91504-91877, priority= 4 4 features # Delete group HintGroup SGN-U345213, 91504-91881, priority= 4 4 features # Delete group HintGroup SGN-U314128, 91504-91798, priority= 4 4 features # Delete group HintGroup SGN-U322051, 91505-91851, priority= 4 2 features # Delete group HintGroup SGN-U314327, 91505-91873, priority= 4 4 features # Delete group HintGroup SGN-U312516, 91505-91873, priority= 4 4 features # Delete group HintGroup SGN-U337112, 91505-91854, priority= 4 5 features # Delete group HintGroup SGN-U318407, 91506-91852, priority= 4 3 features # Delete group HintGroup SGN-U327900, 91506-91852, priority= 4 3 features # Delete group HintGroup SGN-U331857, 91506-91799, priority= 4 3 features # Delete group HintGroup SGN-U343731, 91507-91797, priority= 4 3 features # Delete group HintGroup SGN-U313698, 91507-91625, priority= 4 3 features # Delete group HintGroup SGN-U338650, 91507-91884, priority= 4 3 features # Delete group HintGroup SGN-U320945, 91507-91882, priority= 4 4 features # Delete group HintGroup SGN-U313558, 91508-91854, priority= 4 3 features # Delete group HintGroup SGN-U313463, 91508-91614, priority= 4 3 features # Delete group HintGroup SGN-U324177, 91508-91852, priority= 4 3 features # Delete group HintGroup SGN-U329984, 91508-91852, priority= 4 3 features # Delete group HintGroup SGN-U324383, 91508-91905, priority= 4 6 features # Delete group HintGroup SGN-U331805, 91508-91614, priority= 4 3 features # Delete group HintGroup SGN-U324398, 91509-91884, priority= 4 4 features # Delete group HintGroup SGN-U334961, 91509-91614, priority= 4 2 features # Delete group HintGroup SGN-U313166, 91509-91572, priority= 4 2 features # Delete group HintGroup SGN-U326266, 91509-91890, priority= 4 3 features # Delete group HintGroup SGN-U314306, 91509-91883, priority= 4 3 features # Delete group HintGroup SGN-U315944, 91514-91871, priority= 4 3 features # Delete group HintGroup SGN-U339940, 91554-91950, priority= 4 6 features # Delete group HintGroup SGN-U314948, 91560-91884, priority= 4 3 features # Delete group HintGroup SGN-U316523, 91639-91799, priority= 4 2 features # Delete group HintGroup SGN-U345986, 91639-91801, priority= 4 2 features # Delete group HintGroup SGN-U332772, 91785-92048, priority= 4 3 features # Delete group HintGroup SGN-U330285, 91785-91909, priority= 4 3 features # Delete group HintGroup SGN-U344185, 91785-91899, priority= 4 3 features # Delete group HintGroup SGN-U314936, 91785-92044, priority= 4 3 features # Delete group HintGroup SGN-U316539, 91785-91876, priority= 4 3 features # Delete group HintGroup SGN-U320414, 91785-91956, priority= 4 4 features # Delete group HintGroup SGN-U324883, 91785-91880, priority= 4 3 features # Delete group HintGroup SGN-U313688, 91785-92044, priority= 4 3 features # Delete group HintGroup SGN-U322544, 91785-91906, priority= 4 3 features # Delete group HintGroup SGN-U313428, 91785-92049, priority= 4 3 features # Delete group HintGroup SGN-U317759, 91785-92048, priority= 4 3 features # Delete group HintGroup SGN-U333985, 91785-91880, priority= 4 3 features # Delete group HintGroup SGN-U335708, 91785-91904, priority= 4 3 features # Delete group HintGroup SGN-U336194, 91785-91904, priority= 4 3 features # Delete group HintGroup SGN-U333730, 91785-92047, priority= 4 3 features # Delete group HintGroup SGN-U317455, 91785-92048, priority= 4 3 features # Delete group HintGroup SGN-U313406, 91785-92049, priority= 4 3 features # Delete group HintGroup SGN-U339007, 91785-91871, priority= 4 3 features # Delete group HintGroup SGN-U314558, 91785-91913, priority= 4 2 features # Delete group HintGroup SGN-U315151, 91785-91907, priority= 4 3 features # Delete group HintGroup SGN-U313766, 91785-91909, priority= 4 3 features # Delete group HintGroup SGN-U340006, 91791-91877, priority= 4 3 features # Delete group HintGroup SGN-U312550, 91803-92044, priority= 4 6 features # Delete group HintGroup SGN-U326435, 91844-91941, priority= 4 3 features # Forced unstranded hint group to the only possible strand for 7 groups. # Deleted 133 groups because some hint was not satisfiable. # Constraints/Hints: C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 37 407 0 . . grp=SGN-U337995;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 11 980 0 . . grp=SGN-U324291;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 1828 2149 0 - . grp=SGN-U341412;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 2817 2843 0 - . grp=SGN-U341412;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 3719 3918 0 . . grp=SGN-U339883;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 9441 9453 0 . . grp=SGN-U342126;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 9442 9456 0 . . grp=SGN-U319881;pri=4;src=E "215.443;1;2:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 9442 9459 0 . . grp=SGN-U324032;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 9443 9460 0 . . grp=SGN-U335704;pri=4;src=E "289.427;1;3:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 9447 9460 0 . . grp=SGN-U324358;pri=4;src=E "372.759;1;4:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 9443 9462 0 . . grp=SGN-U324134;pri=4;src=E "215.443;1;2:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 9443 9469 0 . . grp=SGN-U326676;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 13793 13828 0 . . grp=SGN-U314435;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 19102 19424 0 + . grp=SGN-U325887;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 20975 21263 0 + . grp=SGN-U325887;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 21362 21363 0 + . grp=SGN-U341066;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 21450 21468 0 . . grp=SGN-U325968;pri=4;src=E "65.7933;1;0:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 22752 23032 0 + . grp=SGN-U341066;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 25727 25785 0 . . grp=SGN-U344192;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 25685 25854 0 . . grp=SGN-U342047;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 29168 29637 0 + . grp=SGN-U346649;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 30365 30394 0 + . grp=SGN-U346649;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 33529 34129 0 - . grp=SGN-U318876;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 37924 38102 0 - . grp=SGN-U318876;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 39545 39643 0 + . grp=SGN-U344695;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 40727 40782 0 + . grp=SGN-U344695;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 52118 52129 0 . . grp=SGN-U315798;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 73406 73433 0 . . grp=SGN-U339909;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 73605 73641 0 . . grp=SGN-U339909;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 74730 74750 0 . . grp=SGN-U319540;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 77176 77392 0 - . grp=SGN-U325341;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79199 79249 0 - . grp=SGN-U325341;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79564 79574 0 . . grp=SGN-U325968;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79570 79578 0 . . grp=SGN-U343547;pri=4;src=E "215.443;1;2:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79554 79583 0 . . grp=SGN-U323109;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79570 79583 0 . . grp=SGN-U338366;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79572 79583 0 . . grp=SGN-U316482;pri=4;src=E "372.759;1;4:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79572 79583 0 . . grp=SGN-U340180;pri=4;src=E "372.759;1;4:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79572 79583 0 . . grp=SGN-U341031;pri=4;src=E "372.759;1;4:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79575 79584 0 . . grp=SGN-U342683;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79729 79738 0 . . grp=SGN-U323109;pri=4;src=E "100;1;1:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79731 79739 0 . . grp=SGN-U316482;pri=4;src=E "464.159;1;5:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79731 79739 0 . . grp=SGN-U338366;pri=4;src=E "464.159;1;5:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79731 79739 0 . . grp=SGN-U341031;pri=4;src=E "464.159;1;5:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79732 79742 0 . . grp=SGN-U313562;pri=4;src=E "464.159;1;5:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79730 79756 0 . . grp=SGN-U342683;pri=4;src=E "100;1;1:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79725 79758 0 . . grp=SGN-U343547;pri=4;src=E "65.7933;1;0:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79732 79758 0 . . grp=SGN-U342450;pri=4;src=E "142.51;1;2:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79733 79758 0 . . grp=SGN-U328100;pri=4;src=E "193.07;1;3:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79734 79758 0 . . grp=SGN-U319021;pri=4;src=E "316.228;1;5:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79734 79758 0 . . grp=SGN-U334188;pri=4;src=E "316.228;1;5:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79732 79761 0 . . grp=SGN-U328123;pri=4;src=E "65.7933;1;0:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79884 79913 0 . . grp=SGN-U313562;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79895 79927 0 . . grp=SGN-U317489;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 79925 79927 0 . . grp=SGN-U340180;pri=4;src=E "215.443;1;2:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 80455 80464 0 . . grp=SGN-U319166;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 80457 80476 0 . . grp=SGN-U315835;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91505 91528 0 . . grp=SGN-U315183;pri=4;src=E "1681.92;1;20:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91506 91528 0 . . grp=SGN-U322971;pri=4;src=E "2424.46;1;28:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91498 91529 0 . . grp=SGN-U338589;pri=4;src=E "387.468;1;6:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91485 91530 0 . . grp=SGN-U344173;pri=4;src=E "65.7933;1;0:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91486 91530 0 . . grp=SGN-U346748;pri=4;src=E "100;1;1:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91487 91530 0 . . grp=SGN-U341552;pri=4;src=E "142.51;1;2:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91488 91530 0 . . grp=SGN-U337534;pri=4;src=E "193.07;1;3:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91490 91530 0 . . grp=SGN-U334188;pri=4;src=E "251.189;1;4:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91496 91530 0 . . grp=SGN-U315798;pri=4;src=E "316.228;1;5:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91499 91530 0 . . grp=SGN-U315835;pri=4;src=E "387.468;1;6:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91501 91530 0 . . grp=SGN-U331026;pri=4;src=E "545.559;1;8:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91501 91530 0 . . grp=SGN-U339387;pri=4;src=E "545.559;1;8:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91504 91530 0 . . grp=SGN-U345032;pri=4;src=E "630.957;1;9:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91505 91530 0 . . grp=SGN-U315223;pri=4;src=E "1389.5;1;17:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91505 91530 0 . . grp=SGN-U319021;pri=4;src=E "1389.5;1;17:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91505 91530 0 . . grp=SGN-U328100;pri=4;src=E "1389.5;1;17:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91505 91530 0 . . grp=SGN-U342450;pri=4;src=E "1389.5;1;17:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91505 91530 0 . . grp=SGN-U343087;pri=4;src=E "1389.5;1;17:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91506 91530 0 . . grp=SGN-U313674;pri=4;src=E "2061.99;1;24:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91506 91530 0 . . grp=SGN-U336291;pri=4;src=E "2061.99;1;24:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U312734;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U313132;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U327048;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U334814;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U335401;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U336025;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U336957;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U337571;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U338882;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U344285;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91530 0 . . grp=SGN-U346886;pri=4;src=E "3593.81;1;43:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91508 91530 0 . . grp=SGN-U312602;pri=4;src=E "4738.88;1;63:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91508 91530 0 . . grp=SGN-U318364;pri=4;src=E "4738.88;1;63:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91508 91530 0 . . grp=SGN-U320831;pri=4;src=E "4738.88;1;63:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91508 91530 0 . . grp=SGN-U321562;pri=4;src=E "4738.88;1;63:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91508 91530 0 . . grp=SGN-U322116;pri=4;src=E "4738.88;1;63:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91508 91530 0 . . grp=SGN-U323561;pri=4;src=E "4738.88;1;63:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91508 91530 0 . . grp=SGN-U331419;pri=4;src=E "4738.88;1;63:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91508 91530 0 . . grp=SGN-U340180;pri=4;src=E "4738.88;1;63:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91508 91530 0 . . grp=SGN-U341031;pri=4;src=E "4738.88;1;63:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91509 91530 0 . . grp=SGN-U341316;pri=4;src=E "4786.3;1;64:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91510 91530 0 . . grp=SGN-U312657;pri=4;src=E "5054.8;1;70:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91511 91530 0 . . grp=SGN-U334006;pri=4;src=E "5097.03;1;71:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91513 91530 0 . . grp=SGN-U313747;pri=4;src=E "5138.58;1;72:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91514 91530 0 . . grp=SGN-U313759;pri=4;src=E "5179.47;1;73:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91510 91548 0 . . grp=SGN-U314393;pri=4;src=E "193.07;1;3:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91510 91549 0 . . grp=SGN-U314666;pri=4;src=E "100;1;1:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91507 91584 0 . . grp=SGN-U320216;pri=4;src=E "65.7933;1;0:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91797 0 . . grp=SGN-U312450;pri=4;src=E "7091.63;1;124:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91788 91797 0 . . grp=SGN-U320253;pri=4;src=E "7457.81;1;147:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91798 0 . . grp=SGN-U312649;pri=4;src=E "6476.21;1;96:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91798 0 . . grp=SGN-U318364;pri=4;src=E "6476.21;1;96:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91798 0 . . grp=SGN-U323561;pri=4;src=E "6476.21;1;96:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91798 0 . . grp=SGN-U340180;pri=4;src=E "6476.21;1;96:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91798 0 . . grp=SGN-U341031;pri=4;src=E "6476.21;1;96:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91788 91798 0 . . grp=SGN-U314014;pri=4;src=E "6790.99;1;109:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91789 91798 0 . . grp=SGN-U315306;pri=4;src=E "6978.31;1;118:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U315798;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U319021;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U326390;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U334188;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U334814;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U336291;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U337571;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U339387;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U341552;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U342450;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91799 0 . . grp=SGN-U343087;pri=4;src=E "5130.33;1;59:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91788 91799 0 . . grp=SGN-U316996;pri=4;src=E "5321.42;1;63:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91800 0 . . grp=SGN-U333388;pri=4;src=E "3593.81;1;35:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91789 91800 0 . . grp=SGN-U331847;pri=4;src=E "3906.94;1;39:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91801 0 . . grp=SGN-U342802;pri=4;src=E "3426.76;1;33:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91790 91801 0 . . grp=SGN-U315770;pri=4;src=E "3906.94;1;39:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91802 0 . . grp=SGN-U313399;pri=4;src=E "3340.48;1;32:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91802 0 . . grp=SGN-U327048;pri=4;src=E "3340.48;1;32:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91788 91802 0 . . grp=SGN-U312331;pri=4;src=E "3511.19;1;34:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91790 91802 0 . . grp=SGN-U322139;pri=4;src=E "3753.77;1;37:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91803 0 . . grp=SGN-U340506;pri=4;src=E "2371.37;1;22:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91791 91803 0 . . grp=SGN-U344113;pri=4;src=E "3070.29;1;29:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91804 0 . . grp=SGN-U314531;pri=4;src=E "2263.8;1;21:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91790 91804 0 . . grp=SGN-U323579;pri=4;src=E "2580.86;1;24:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91791 91804 0 . . grp=SGN-U328153;pri=4;src=E "2880.44;1;27:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91807 0 . . grp=SGN-U314708;pri=4;src=E "1930.7;1;18:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91807 0 . . grp=SGN-U333683;pri=4;src=E "1930.7;1;18:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91807 0 . . grp=SGN-U343822;pri=4;src=E "1930.7;1;18:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91788 91807 0 . . grp=SGN-U314923;pri=4;src=E "2043.36;1;19:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91791 91807 0 . . grp=SGN-U328832;pri=4;src=E "2371.37;1;22:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91808 0 . . grp=SGN-U343004;pri=4;src=E "1584.89;1;15:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91808 0 . . grp=SGN-U346417;pri=4;src=E "1584.89;1;15:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91809 0 . . grp=SGN-U328100;pri=4;src=E "1350.31;1;13:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91809 0 . . grp=SGN-U345992;pri=4;src=E "1350.31;1;13:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91789 91809 0 . . grp=SGN-U315141;pri=4;src=E "1467.8;1;14:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91812 0 . . grp=SGN-U336259;pri=4;src=E "1115.88;1;11:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91812 0 . . grp=SGN-U344090;pri=4;src=E "1115.88;1;11:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91793 91814 0 . . grp=SGN-U332393;pri=4;src=E "1115.88;1;11:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91815 0 . . grp=SGN-U336025;pri=4;src=E "885.867;1;9:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91815 0 . . grp=SGN-U344285;pri=4;src=E "885.867;1;9:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91817 0 . . grp=SGN-U321562;pri=4;src=E "666.085;1;7:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91817 0 . . grp=SGN-U334658;pri=4;src=E "666.085;1;7:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91817 0 . . grp=SGN-U344173;pri=4;src=E "666.085;1;7:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91818 0 . . grp=SGN-U344618;pri=4;src=E "289.427;1;3:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91828 0 . . grp=SGN-U312734;pri=4;src=E "215.443;1;2:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91799 91830 0 . . grp=SGN-U312599;pri=4;src=E "289.427;1;3:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91791 91838 0 . . grp=SGN-U314438;pri=4;src=E "215.443;1;2:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91839 0 . . grp=SGN-U312609;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91786 91852 0 . . grp=SGN-U338366;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91852 91853 0 . . grp=SGN-U343822;pri=4;src=E "215.443;1;2:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91839 91870 0 . . grp=SGN-U331452;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91844 91870 0 . . grp=SGN-U313302;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91865 91870 0 . . grp=SGN-U314708;pri=4;src=E "289.427;1;3:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91872 91880 0 . . grp=SGN-U343004;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91876 91883 0 . . grp=SGN-U345992;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91883 91885 0 . . grp=SGN-U328100;pri=4;src=E "289.427;1;3:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91858 91895 0 . . grp=SGN-U344863;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91902 91905 0 . . grp=SGN-U315141;pri=4;src=E "289.427;1;3:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91881 91912 0 . . grp=SGN-U317786;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91891 91914 0 . . grp=SGN-U316287;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91906 91914 0 . . grp=SGN-U344090;pri=4;src=E "215.443;1;2:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91908 91915 0 . . grp=SGN-U328832;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91877 91917 0 . . grp=SGN-U338646;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91937 91944 0 . . grp=SGN-U346417;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91955 91955 0 . . grp=SGN-U317786;pri=4;src=E "151.991;1;1:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 91946 91958 0 . . grp=SGN-U344863;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint ep 92040 92045 0 . . grp=SGN-U333683;pri=4;src=E "100;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 19849 19884 0 + . grp=SGN-U325887;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 20121 20308 0 + . grp=SGN-U325887;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 20530 20719 0 + . grp=SGN-U325887;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 21783 22229 0 + . grp=SGN-U341066;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 34747 34908 0 - . grp=SGN-U318876;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 35434 35565 0 - . grp=SGN-U318876;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 35997 36049 0 - . grp=SGN-U318876;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 37006 37515 0 - . grp=SGN-U318876;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 39720 39786 0 + . grp=SGN-U344695;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 40533 40642 0 + . grp=SGN-U344695;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 78194 78238 0 - . grp=SGN-U325341;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 78364 78482 0 - . grp=SGN-U325341;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 78850 78925 0 - . grp=SGN-U325341;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 79029 79111 0 - . grp=SGN-U325341;pri=4;src=E "1000;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint exon 79731 79750 0 . . grp=SGN-U340180;pri=4;src=E "46.4159;1;0:8" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 2150 2816 0 - . grp=SGN-U341412;pri=4;src=E "13772.4;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 19425 19848 0 + . grp=SGN-U325887;pri=4;src=E "12256.5;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 19885 20120 0 + . grp=SGN-U325887;pri=4;src=E "11199.2;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 20309 20529 0 + . grp=SGN-U325887;pri=4;src=E "11118.8;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 20720 20974 0 + . grp=SGN-U325887;pri=4;src=E "11301.7;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 21364 21782 0 + . grp=SGN-U341066;pri=4;src=E "5196.96;1;0:1" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 22230 22751 0 + . grp=SGN-U341066;pri=4;src=E "12846.7;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 29638 30364 0 + . grp=SGN-U346649;pri=4;src=E "14174.7;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 34130 34746 0 - . grp=SGN-U318876;pri=4;src=E "13445.9;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 34909 35433 0 - . grp=SGN-U318876;pri=4;src=E "12865.2;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 35566 35996 0 - . grp=SGN-U318876;pri=4;src=E "12297.7;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 36050 37005 0 - . grp=SGN-U318876;pri=4;src=E "15821.3;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 37516 37923 0 - . grp=SGN-U318876;pri=4;src=E "12162.8;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 39644 39719 0 + . grp=SGN-U344695;pri=4;src=E "10371.4;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 39787 40532 0 + . grp=SGN-U344695;pri=4;src=E "14304.6;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 40643 40726 0 + . grp=SGN-U344695;pri=4;src=E "10411.3;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 77393 78193 0 - . grp=SGN-U325341;pri=4;src=E "14687.1;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 78239 78363 0 - . grp=SGN-U325341;pri=4;src=E "10618.2;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 78483 78849 0 - . grp=SGN-U325341;pri=4;src=E "11925.8;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 78926 79028 0 - . grp=SGN-U325341;pri=4;src=E "10506.7;1;0:0" C12HBa0165F06.1 AUGUSTUS_tom_ugs_hint intron 79112 79198 0 - . grp=SGN-U325341;pri=4;src=E "10426.3;1;0:0" # Predicted genes for sequence number 1 on both strands ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 75 2829 1 - . ID=g1 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 75 2829 . - . ID=g1.t1;Parent=g1 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 75 77 . - 0 Parent=g1.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 75 2149 . - 2 ID=g1.t1.cds;Parent=g1.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 2817 2829 . - 0 ID=g1.t1.cds;Parent=g1.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 2827 2829 . - 0 Parent=g1.t1 # protein sequence = [MLLLAASAIFVNAERRRLINLIPDSVRKAWKDWEIEVLILGSLILQIMLILFGKRRQCVANLWIRMTLWTSYLLADWI # AIVSLGIIAQNTLDKCKQTSDDDNFKDELMSFWAPFMLLHLGGPDTITAYSLEDNELWLRHLVGLIIQSGLTFYILLVSLPGSSWLPFLSLFIFVSGV # IKFSERTCALRSAKIENLRDSMLTSPDPGPNYAKFMEEYTLKKAEGFYVIADEVKEISLPIDHSYPTRKDKLLLISEAFDQFQTFKRLFVDLILSFQD # RDNSQFYFKQLTPKDAFDVIETELGFAYDTFYTKAPVIYTPLGFILRVITFSCTFFTLISFSLCKERSKYHILDLILTYLLLVVAFLLEICALIVLLY # SDWTKNWLSKGKHDRKFCQSFLLKKLCLRRSTNMRWSNGTLQYNLLSYCVEFKPPRCYWFQKLFRINELLEKHKYKKDELVTPGLKKLIFDHFKKFAG # ESNNKHDHPVLCTSRGTEALKGNGCSSLVWSTELEFDQSFLIWHIATDLCYYTDDSSGTRSIESKQSKQLSDYMLYLLVVCPFMLPIGLGMIRFRDTC # AEAKEFFTERKVGKDLTIASRKLLTVNTEVGPAKVKGDRSKSVLFDACILAKSLKAKGNQRKWEIISEVWVEMLAYAATHCRGNHHAQQLRKGGELLT # HVWLLMAHLGITEQFQINRGHARAKLIVK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 100 # CDS exons: 2/2 # E: 2 # CDS introns: 1/1 # E: 1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 3 # E: 3 (SGN-U324291,SGN-U337995,SGN-U341412) ### ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 3876 14687 1 - . ID=g2 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 3876 14687 . - . ID=g2.t1;Parent=g2 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 3876 3878 . - 0 Parent=g2.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 3876 3959 . - 0 ID=g2.t1.cds;Parent=g2.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 4188 7153 . - 2 ID=g2.t1.cds;Parent=g2.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 14636 14687 . - 0 ID=g2.t1.cds;Parent=g2.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 14685 14687 . - 0 Parent=g2.t1 # protein sequence = [MRISKMIIREDSVRAKVGLDLRNIRCCSCLLHPCGQMELAAEASVVIERLKDTLSNEITNKRVIENALEDMQRAIADT # NDSEEFKKWAEGCLHSLYYVEDSVESFVLDIAPQNKKWSFLMNHTLLLKNFLGCKLTKKMKRIPSDIKRVINEKHKSTGEQDARRNGTTTYMGDQNGA # EAEDGDIEDHNDEDSAKVRLICPKAQCSYPMIPEREEIVLEVDKKPLRCIDDVPLRLDRENISLGCISDKSMMLDRATHARLIYTYSYDDEELEMFDI # KQEVYDLVERLTTTADDGRPPIVQIAGKMGSGKTTLARAIYRNRNIRNHFESGCAWVTISKKFNKPDILQNLLKQMGDSKDSVDLTTNELESRLLECF # NKEKYLIVLDDVQSEQMWEELRSVFLGSRNGSKLLLITTSVSPMWYVSPPNCIHKVKKLKKNYSWNLFMKKAGWDTWELGNEHQDSKQRVLDVCSGLP # LNIVLLGSMLSTKGDTNRFDYLQKMLRTNWETKDIVSLSYTDLPDHLKLCVLYLVLFPKEYDIPVRRLFRLWLSEGFVNPKPDKFPEDVVQENFDDLV # KRSLIQISKFRSDGSPRRCRLLGVLHDYLLPKAQNIKFFHVHCSTCSTEDTVLLNVRRLVEHASSRDIYSDASRFKHLRSYLSFNFQRKDTPAKEVGI # LLTSVITKGFGLLRVLDLEGVYKPSLPENLGELFHLRYLGLRWTFLDALPSSVGDLPYLETLDVKHTNINNLPTSMWKSKKLRHLNLSHIRLDMPQHS # DTNSLPTLLTLWGLSVDDDSPVKNGLDRLCNLREAGITFCLTDCDHLLNWISNLTSLQSLRLRSINDVGHPSRFGNQPLSLSKLSNLSHLNLLGKLPN # LPENLPQGLKVVTLSLSKLTDDPMPILGKLQHLNVLRLLSDSYMGKEMVCPQRGFKELRVLKIWKLKNLEKWDVEEAAMEKLKEINIRCCYKLMSIPK # ILRKKTSLRELIITNMPEEFKQNVNKYMRSRDLILTFKDYDFTPLPCISKATSIRAVLPFIIDYHIQSFDANQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 20 # CDS exons: 1/3 # E: 1 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 9 # E: 9 (SGN-U339883,SGN-U342126,SGN-U319881,SGN-U324032,SGN-U335704,SGN-U324134,SGN-U326676,...) ### ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 15301 22094 1 + . ID=g3 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 15301 22094 . + . ID=g3.t1;Parent=g3 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 15301 15303 . + 0 Parent=g3.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 15301 15930 . + 0 ID=g3.t1.cds;Parent=g3.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 19373 19424 . + 0 ID=g3.t1.cds;Parent=g3.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 19849 19884 . + 2 ID=g3.t1.cds;Parent=g3.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 20121 20308 . + 2 ID=g3.t1.cds;Parent=g3.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 20530 20719 . + 0 ID=g3.t1.cds;Parent=g3.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 20975 21363 . + 2 ID=g3.t1.cds;Parent=g3.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 21783 22094 . + 0 ID=g3.t1.cds;Parent=g3.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 22092 22094 . + 0 Parent=g3.t1 # protein sequence = [MFKCEFPKRARRRLPFKPPVLMKSTENRNVSMISTMPELLRWTFLVYDSLTTDEDIVLFVKGLNNRQGINREPNEFNC # IFGYGGNNVIRTNVTSSIQEVFRCNRPDPNVLGGEGVSISLENLLPVPMVVPSVAYYNAPRKLATNKKSEKARLCACTMVYNVGKFLKEWVVYHSKIG # VEKFVLYDNASDDDLGKVVDELVHDGYDVKTYFWIIEDYDEDMTSRSNNSAVHARGNSSDSGSGNGRKEGFFRSKKSGESNNQNNNVARSFAFKELAI # ATQSFRETNLIGEGGFGSVYKGRIDSGQIVAIKQLNLEGLQGNQEFVVEVLMLSLMHHNNLVNLIGYCTHGEQRLLVYEFMPLGSLENHLFDLEPGTT # PLSWKTRLKIAAGAAHGLEYLHKANPPVIYRDLKSSNILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGKLTLKSDIYSFGVV # LLELITGRKAYDRTKKQGEQNLVVWSNPFLKDRRKYIHLVDPMLDGQFSSRCLHHAVAVTAMCLQEQASFRPSITDIVTALDYLLLQAQHSGTSRGGS # QSDKHIPPPSTEEFNVSSRNRSYDNMAITF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 76.9 # CDS exons: 5/7 # E: 5 # CDS introns: 5/6 # E: 5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 3 # E: 3 (SGN-U325887,SGN-U341066,SGN-U325968) ### ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 25035 31826 1 + . ID=g4 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 25035 31826 . + . ID=g4.t1;Parent=g4 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 25035 25037 . + 0 Parent=g4.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 25035 25533 . + 0 ID=g4.t1.cds;Parent=g4.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 29473 29637 . + 2 ID=g4.t1.cds;Parent=g4.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 30365 30600 . + 2 ID=g4.t1.cds;Parent=g4.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 31186 31300 . + 0 ID=g4.t1.cds;Parent=g4.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 31702 31826 . + 2 ID=g4.t1.cds;Parent=g4.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 31824 31826 . + 0 Parent=g4.t1 # protein sequence = [MSNSGSINSPASLSPPENQPLEINIVDSDFVVILAALLCGLICVIGLVAVARCAWIRRITGGNSDDSPFPPANKGLKK # KVLKSLPKFSYTPEQSVQFSECAICLMEFVIGDEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQIPVVSRCSMCGELPVMNSSAAVGDLSHDEFKKM # YLGLKVQNERRSNDEFIYSDFVDLPKSVDWRKKGAVTDVKNQGSCGSCWAFSTVAAVEGINQIRTGNLTSLSEQELIDCDTKYNSGCNGGLMDYAFQF # IVSQGGLHKEDDYPYLMEEGTCDEKRDESEVVTIDGYHDVPVNDEQSLLKALANQPLSVAIEASVDILSKPWNYECRVCLMDIVEQHWIMEWQQLDMD # PQKGWIT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 22.2 # CDS exons: 1/5 # E: 1 # CDS introns: 1/4 # E: 1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 4 # E: 4 (SGN-U325968,SGN-U342047,SGN-U344192,SGN-U346649) ### ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 33884 37486 1 - . ID=g5 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 33884 37486 . - . ID=g5.t1;Parent=g5 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 33884 33886 . - 0 Parent=g5.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 33884 34129 . - 0 ID=g5.t1.cds;Parent=g5.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 34747 34908 . - 0 ID=g5.t1.cds;Parent=g5.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 35434 35565 . - 0 ID=g5.t1.cds;Parent=g5.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 35997 36049 . - 2 ID=g5.t1.cds;Parent=g5.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 37006 37486 . - 0 ID=g5.t1.cds;Parent=g5.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 37484 37486 . - 0 Parent=g5.t1 # protein sequence = [MSVTEAGSGVMTSRDHFSVAGVQNSPSNVPATTPVVQNMHLGYRDENTAVFAPPPYQSAEGSAGAGTSMLQNLNNNSS # EPMKRKRGRPRKYGPDGSMALGLNPAASPVGGGSLGGSLSPRDPGNSAGAQMHSGGPGSPNSSKKGRGRPPGSGKKQQMDNLGSTGFGFTPHIIAVKP # GEDVAYKIMSFSQNGPRAVCILSASGAISYVTLKQTATSGGTATYEGRFEILSLSGSFMLSDIGGQQSRTGGLSVSLAGSDGRILGGCVAGVLTAASP # VQVIVGSFIADGRKEPKTSNHFEVLPAPLNANLGVGGGLTGANSPPSRGTYSESSGGPGSPINQRGPVCTNDNLQGISSMPWK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 100 # CDS exons: 5/5 # E: 5 # CDS introns: 4/4 # E: 4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 2 # E: 2 (SGN-U325968,SGN-U318876) ### ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 39517 51881 1 + . ID=g6 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 39517 51881 . + . ID=g6.t1;Parent=g6 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 39517 39519 . + 0 Parent=g6.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 39517 39643 . + 0 ID=g6.t1.cds;Parent=g6.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 39720 39786 . + 2 ID=g6.t1.cds;Parent=g6.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 40533 40642 . + 1 ID=g6.t1.cds;Parent=g6.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 40727 40792 . + 2 ID=g6.t1.cds;Parent=g6.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 46718 47003 . + 2 ID=g6.t1.cds;Parent=g6.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 47092 47131 . + 1 ID=g6.t1.cds;Parent=g6.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 50680 50731 . + 0 ID=g6.t1.cds;Parent=g6.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 50960 51026 . + 2 ID=g6.t1.cds;Parent=g6.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 51686 51881 . + 1 ID=g6.t1.cds;Parent=g6.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 51879 51881 . + 0 Parent=g6.t1 # protein sequence = [MATLSSSSSSSSSSSSPCLNQYQYQAILRLPRVPLISSHLLKVPKKNRNSLIFCCNNTVPDSRTGEQVKGECLTKRRE # LLLQAGSVAFSLSAFTSIALAEKDVPEEFRVYSDDVNKFKIMIPSVVRIDKSEEEMVVDRSEDPQMKTNAAIVIADDDARSDQFPKVTTKVTDSIALI # GEDDEGSPEHQAEFIEKLGSFYQEKAMEFKQPGFYGHPLNCLKLWRSVIKLGGYDQDGSSYNTPKRAKSQKTSGSHEGQNEEGQPMKVAKAKTSQPWS # PYLLELISFGPTVMSPFMGVFTFMCPLSRKISESTKQEHCECLAKEHCECWAKEVLRLQPPQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 41.2 # CDS exons: 4/9 # E: 4 # CDS introns: 3/8 # E: 3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # E: 1 (SGN-U344695) # incompatible hint groups: 1 # E: 1 (SGN-U325968) ### ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 52870 64213 1 - . ID=g7 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 52870 64213 . - . ID=g7.t1;Parent=g7 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 52870 52872 . - 0 Parent=g7.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 52870 52889 . - 2 ID=g7.t1.cds;Parent=g7.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 56447 56559 . - 1 ID=g7.t1.cds;Parent=g7.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 58709 58851 . - 0 ID=g7.t1.cds;Parent=g7.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 63110 63158 . - 1 ID=g7.t1.cds;Parent=g7.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 64086 64213 . - 0 ID=g7.t1.cds;Parent=g7.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 64211 64213 . - 0 Parent=g7.t1 # protein sequence = [MLANYKYSCFVDSDILLRKGHMNMKTPVKGETSDGPKLINSSREPEYDKKFCCGHYSFLHSQCSFAKHSQCSCFVDSE # IFLLKGHMNMKTPMKGDITVGPKLINSSSPYSLSCSESVRVSNTSVDLDVGSFMIRFGDMNLRRDTGTKNRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 2 # E: 2 (SGN-U325968,SGN-U315798) ### ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 71035 76155 1 + . ID=g8 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 71035 76155 . + . ID=g8.t1;Parent=g8 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 71035 71037 . + 0 Parent=g8.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 71035 71261 . + 0 ID=g8.t1.cds;Parent=g8.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 71350 71389 . + 1 ID=g8.t1.cds;Parent=g8.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 74444 74578 . + 0 ID=g8.t1.cds;Parent=g8.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 74996 75047 . + 0 ID=g8.t1.cds;Parent=g8.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 75221 75293 . + 2 ID=g8.t1.cds;Parent=g8.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 75531 75597 . + 1 ID=g8.t1.cds;Parent=g8.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 76051 76155 . + 0 ID=g8.t1.cds;Parent=g8.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 76153 76155 . + 0 Parent=g8.t1 # protein sequence = [MKTNAATLTTDGDARSDQFPKVTIEVKDSSAFIGDDDEGSFEDQAVFIEKLGTFYQEKAVELKLPRFYGHRLNCLKLW # RSVIKLGGYDQLLLQYERHMTQIGELQLPIAPSPVDNENSVDNENSYERHMTQIGEDGSAYNTPKRAKSRKTSGSLKHQGKKEADQQTKAAETETFKP # LDVQVVDVGPPADWVKINVRETVVTLPARIDHLRTNGDVTLHGCLHVHMPFAQKDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/7 # CDS introns: 0/6 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 4 # E: 4 (SGN-U325968,SGN-U315798,SGN-U339909,SGN-U319540) ### ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 77366 79310 1 - . ID=g9 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 77366 79310 . - . ID=g9.t1;Parent=g9 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 77366 77368 . - 0 Parent=g9.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 77366 77392 . - 0 ID=g9.t1.cds;Parent=g9.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 78194 78238 . - 0 ID=g9.t1.cds;Parent=g9.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 78364 78482 . - 2 ID=g9.t1.cds;Parent=g9.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 78850 78925 . - 0 ID=g9.t1.cds;Parent=g9.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 79029 79111 . - 2 ID=g9.t1.cds;Parent=g9.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 79199 79310 . - 0 ID=g9.t1.cds;Parent=g9.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 79308 79310 . - 0 Parent=g9.t1 # protein sequence = [MMLTDEELLADWQIGAGEGDGVRSLLAFYPPEASNSNVSIVITSLGADFTKLESFGKVDAFAENLVSGFDRSWQRPPG # VKAKLIDSKASKGLYYIEYTLQNPGESLRHLFSVLGIANNGIYNRLYTLTGQFVDEEAEKYGAKIQKAVSSFRLI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 100 # CDS exons: 6/6 # E: 6 # CDS introns: 5/5 # E: 5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 3 # E: 3 (SGN-U325968,SGN-U315798,SGN-U325341) ### ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 91594 102308 1 - . ID=g10 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 91594 102308 . - . ID=g10.t1;Parent=g10 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 91594 91596 . - 0 Parent=g10.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 91594 91967 . - 2 ID=g10.t1.cds;Parent=g10.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 99981 100093 . - 1 ID=g10.t1.cds;Parent=g10.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 102244 102308 . - 0 ID=g10.t1.cds;Parent=g10.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 102306 102308 . - 0 Parent=g10.t1 # protein sequence = [MNVKTPMKGDITVGPKLINSSSPYSLSCSESVWVSNTSVDLDVGSFMIRFGDMNLRRDTGGEKKVFPPKKPYNLKKNE # KKKIWIFFFPQKKKKIFFFLTKKKKKLNKFWVVFPKKKKKKKKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKPSLHHWPPPGKKNLSPP # NFFSKER] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 20 # CDS exons: 1/3 # E: 1 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 41 # E: 41 (SGN-U312450,SGN-U312649,SGN-U326390,SGN-U333388,SGN-U342802,SGN-U313399,SGN-U340506,...) # incompatible hint groups: 23 # E: 23 (SGN-U315798,SGN-U338366,SGN-U341031,SGN-U340180,SGN-U342450,SGN-U328100,SGN-U334188,...) ### ### C12HBa0165F06.1 AUGUSTUS_tom_ugs gene 107129 111403 1 + . ID=g11 C12HBa0165F06.1 AUGUSTUS_tom_ugs transcript 107129 111403 . + . ID=g11.t1;Parent=g11 C12HBa0165F06.1 AUGUSTUS_tom_ugs start_codon 107129 107131 . + 0 Parent=g11.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 107129 107385 . + 0 ID=g11.t1.cds;Parent=g11.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 107474 107513 . + 1 ID=g11.t1.cds;Parent=g11.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 111053 111104 . + 0 ID=g11.t1.cds;Parent=g11.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs CDS 111333 111403 . + 2 ID=g11.t1.cds;Parent=g11.t1 C12HBa0165F06.1 AUGUSTUS_tom_ugs stop_codon 111401 111403 . + 0 Parent=g11.t1 # protein sequence = [MVVDRSEDPQMKTNAAIVIADDDARSDQFPKVTTKVTDSSALIGEDDEGSPEHQAKFIEKLGSFYQEKAMEFKQPRFY # GHPLNCLKLWRSVIKLGGYDQDGSSYNTPKRAKSQKTSGCHERQNEEGQPMKAAKAKTSQP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 ### # command line: # /usr/bin/augustus.real --species=human --hintsfile=/tmp/bac-submission-temp-C12HBa0165F06-Jl4Js/AUGUSTUS_tom_ugs/hints.gff --extrinsicCfgFile=extrinsic.ME.cfg --gff3=on /tmp/bac-submission-temp-C12HBa0165F06-Jl4Js/AUGUSTUS_tom_ugs/seq_with_defline_removed