## #This is a report table with the different datasets used in the last two years. The table is organized into fours columns: # - First: Library_shortname # - Second: Data source (file_type-file_origin) # - Third and the rest: Datasets with the version and the number os sequences. # # So it means that the second dataset have libraries with a version1 (It is the first time that was used in the dataset) # and version2 (new version of the sequence dataset, with different preprocessing parameters). ## +--------------------+-----------------------------------+-------------------+-------------------+ | | | First_Dataset | Second_Dataset | | LIBRARY_SHORTNAME | DATA_SOURCE +-------------------+-------------------+ | | | 2008-01-08 - seqN | 2008-09-02 - seqN | +--------------------+-----------------------------------+-------------------+-------------------+ | AGN_ELP | genbank_sequences-download_dbEST | none | version1 - 8,221 | | AGN_PNL | genbank_sequences-download_dbEST | none | version1 - 23,255 | | AGN_RNC | genbank_sequences-download_dbEST | none | version1 - 29,418 | | AGN_RPC | genbank_sequences-download_dbEST | none | version1 - 7,796 | | AvrE_NtLeaf | genbank_sequences-download_dbEST | none | version1 - 124 | | BL12 | chromatograms-user_submission | version1 - 2,149 | version2 - 2,151 | | BY2_NtInfAt | genbank_sequences-download_dbEST | none | version1 - 419 | | BY2_NtLowB | genbank_sequences-download_dbEST | none | version1 - 234 | | CHO_SL | fasta_files-download_from_TGI* | version1 - 7,872 | version2 - 7,758 | | EST_AXB | fasta_files-download_from_TGI* | version1 - 115 | version2 - 114 | | EST_CSP | fasta_files-download_from_TGI* | version1 - 1,462 | version2 - 1,459 | | EST_FLW | fasta_files-download_from_TGI* | version1 - 1,066 | version2 - 1,062 | | EST_YP | fasta_files-download_from_TGI* | version1 - 342 | version2 - 342 | | EtI_NtLeaf | fasta_files-download_from_TGI* | none | version1 - 968 | | K326_NtRoot | genbank_sequences-download_dbEST | none | version1 - 405 | | KF8 | chromatograms-user_submission | version1 - 4,846 | version2 - 4,677 | | KG9B | chromatograms-user_submission | version1 - 4,121 | version2 - 4,365 | | KL4B | chromatograms-user_submission | version1 - 4,777 | version2 - 4,527 | | KL5B | chromatograms-user_submission | version1 - 5,241 | version2 - 3,367 | | KN6B | chromatograms-user_submission | version1 - 4,860 | version2 - 5,046 | | KP1B | chromatograms-user_submission | version1 - 4,392 | version2 - 4,513 | | KR2B | chromatograms-user_submission | version1 - 4,850 | version2 - 3,845 | | KR3B | chromatograms-user_submission | version1 - 5,155 | version2 - 5,293 | | KT7B | chromatograms-user_submission | version1 - 1,136 | version2 - 1,320 | | KT7C | chromatograms-user_submission | version1 - 3,778 | version2 - 3,397 | | MAT001 | genbank_sequences-download_dbEST | none | version1 - 13,413 | | MAT005 | genbank_sequences-download_dbEST | none | version1 - 5,445 | | Nt_CellSusp34_1B | genbank_sequences-download_dbEST | none | version1 - 118 | | Nt_COL | genbank_sequences-download_dbEST | none | version1 - 16,459 | | Nt_DL | genbank_sequences-download_dbEST | none | version1 - 20,599 | | Nt_Mix1 | genbank_sequences-download_dbEST | none | version1 - 5,893 | | Nt_SL | genbank_sequences-download_dbEST | none | version1 - 26,051 | | Nt_Transf1 | genbank_sequences-download_dbEST | none | version1 - 2,573 | | SAL_KST | fasta_files-download_from_TGI* | none | version1 - 1,890 | | Sam_NtLeaf | genbank_sequences-download_dbEST | none | version1 - 313 | | TL13 | chromatograms-user_submission | version1 - 3,696 | version2 - 3,140 | | TT | chromatograms-user_submission | version1 - 16,008 | version2 - 16,068 | | vNtabmRNA | genbank_sequence-download_nr | version1 - 3,470 | version2 - 3,685 | | Xan_NtPolen | genbank_sequence-download_dbEST | none | version1 - 197 | +--------------------+-----------------------------------+-------------------+-------------------+