>Feature tig00000001 976 8 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00001 product CDS NAD(FAD)-utilizing dehydrogenase, 5241136:5242749 reverse MW:58333 2349 1078 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00002 product CDS NAD(FAD)-utilizing dehydrogenase, 5241136:5242749 reverse MW:58333 3117 2350 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00003 product CDS Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1):5245280 reverse MW:28066 4379 3114 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00004 product CDS Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1):5246542 reverse MW:46147 5299 4376 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00005 product CDS High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1):5247453 reverse MW:31904 6649 5525 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00006 product CDS branched-chain amino acid transport protein BraC:5248803 reverse MW:39532 6649 6569 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 6977 7282 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00007 product CDS: hypothetical protein 5249131:5249436 forward MW:11018 9696 7405 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00008 product CDS Sensory box/GGDEF family protein:5251850 reverse MW:84552 9930 11339 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00009 product CDS Major facilitator family transporter:5253493 forward MW:50956 14289 11443 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00010 product CDS RNA polymerase associated protein RapA:5256443 reverse MW:106626 14520 14861 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00011 product CDS Aspartate-semialdehyde dehydrogenase:5257015 forward MW:12688 14950 15105 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00012 product CDS: hypothetical protein 5257104:5257259 forward MW:5958 15219 15362 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_00013 product PhrS 17051 15384 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00014 product CDS type III helper protein HopPmaH(Pto):5258959 reverse MW:50184 17693 17223 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00015 product CDS enoyl-CoA hydratase, R-specific:5259898 reverse MW:19264 18089 19777 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00016 product CDS Long-chain-fatty-acid--CoA ligase:5261931 forward MW:61683 20133 21824 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00017 product CDS Long-chain-fatty-acid--CoA ligase:5263978 forward MW:61890 22408 26319 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00018 product CDS ATP-dependent helicase hrpA:5268473 forward MW:148324 26559 27680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00019 product CDS 3-oxoacyl-(acyl-carrier-protein) synthase III, putative:5269834 forward MW:40251 27801 32705 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00020 product CDS Leucine-rich repeat domain protein:5274859 forward MW:183022 32745 33872 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00021 product CDS COGs 5274899:5276026 forward MW:42566 35796 33964 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00022 product CDS ABC transporter, ATP-binding/permease protein:5277950 reverse MW:67774 36461 35898 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00023 product CDS Peptidyl-prolyl cis-trans isomerase ppiA precursor:5278615 reverse MW:20227 36461 36399 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 37399 36611 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00024 product CDS Beta-ketoadipate enol-lactone hydrolase:5279553 reverse MW:29607 38336 37413 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00025 product CDS Transcriptional regulator, LysR family:5280490 reverse MW:33958 38404 38718 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00026 product CDS 3-phosphoglycerate kinase:5280872 forward MW:11619 38404 38460 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 44261 39429 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00027 product CDS mannuronan C-5-epimerase, putative:6036982 reverse MW:166685 44540 45418 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00028 product CDS membrane protein, putative:6038139 forward MW:32394 46154 45420 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00029 product CDS Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases):6038875 reverse MW:25848 46636 50838 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00030 product CDS Rhs family protein:5902609 reverse MW:36240 50849 51364 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00031 product hypothetical protein 51827 52681 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00032 product CDS Rhs family protein:3324363 reverse MW:31215 52693 53043 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00033 product hypothetical protein 53945 53277 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00034 product CDS DNA-binding response regulator, LuxR family:3322964 forward MW:24250 57417 53932 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00035 product CDS Two-component hybrid sensor and regulator:3322309 forward MW:124788 57575 58819 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00036 product CDS Urea ABC transporter, urea binding protein:3318666 reverse MW:44793 57575 57679 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 35 product putative signal peptide 58901 59818 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00037 product CDS Urea ABC transporter, permease protein UrtB:3317340 reverse MW:32979 59829 61004 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00038 product CDS Urea ABC transporter, permease protein UrtC:3316412 reverse MW:42208 61001 61762 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00039 product CDS Urea ABC transporter, ATPase protein UrtD:3315240 reverse MW:28146 61773 62462 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00040 product CDS Urea ABC transporter, ATPase protein UrtE:3314468 reverse MW:25104 62587 63819 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00041 product CDS Formamidase:3313654 reverse MW:44769 63926 64273 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00042 product CDS regulatory protein, putative:3312315 reverse MW:12296 64371 64946 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00043 product CDS: hypothetical protein 3311295:3311870 reverse MW:21373 65441 65004 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00044 product CDS: hypothetical protein 3310869:3311237 forward MW:13358 65441 65370 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 66792 65725 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00045 product CDS transcriptional regulator, AraC family:3310516 forward MW:39492 67048 67860 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00046 product CDS Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases):3309193 reverse MW:29808 67915 68208 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00047 product CDS: hypothetical protein 3308033:3308326 reverse MW:10971 69036 68278 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00048 product CDS oxidoreductase, short-chain dehydrogenase/reductase family:3307963 forward MW:26928 69138 69746 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00049 product CDS Transcriptional regulator, TetR family:3307103 reverse MW:22278 71099 69792 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00050 product CDS C4-dicarboxylate transport protein:3306449 forward MW:46226 72371 71202 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00051 product CDS mandelate racemase/muconate lactonizing enzyme family protein:3305039 forward MW:43170 72471 73346 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00052 product CDS Transcriptional regulator:3303770 reverse MW:32233 74329 73475 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00053 product hypothetical protein 74884 75039 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00054 product CDS: hypothetical protein 3301202:3301357 reverse MW:5598 75086 76657 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00055 product CDS: hypothetical protein 3299584:3301155 reverse MW:59672 76959 77276 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00056 product hypothetical protein 77844 77653 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00057 product CDS: hypothetical protein 3298397:3298588 forward MW:7084 79172 77907 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00058 product CDS Small-conductance mechanosensitive channel:3298334 forward MW:47196 79481 79792 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00059 product hypothetical protein 79815 80171 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00060 product CDS transcriptional regulator, LysR family:3296330 reverse MW:9569 80288 81400 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00061 product CDS: hypothetical protein 3294841:3295953 reverse MW:40470 80288 80386 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 33 product putative signal peptide 82303 81410 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00062 product CDS Transcriptional regulator:3294831 forward MW:33037 82410 83621 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00063 product CDS major facilitator family transporter:3293831 reverse MW:41780 83733 84698 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00064 product CDS Dienelactone hydrolase:3292508 reverse MW:35047 85109 84756 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00065 product CDS: hypothetical protein 3290970:3291485 forward MW:18480 85741 86502 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00066 product CDS oxidoreductase, short-chain dehydrogenase/reductase family:3290419 reverse MW:24512 87311 86607 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00067 product CDS Transcriptional regulator, DeoR family:3289634 forward MW:26585 88246 87314 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00068 product CDS: hypothetical protein 3287995:3288927 forward MW:32899 89117 88371 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00069 product CDS putative ABC transporter, periplasmic substrate-binding protein:3287870 forward MW:27889 89117 89052 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 89521 90858 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00070 product CDS ATP-dependent RNA helicase SrmB:3286720 reverse MW:48686 91055 91351 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00071 product CDS Transcriptional regulators:3285186 reverse MW:10655 92474 91611 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00072 product CDS lipoprotein, putative:3284630 forward MW:33629 93272 92544 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00073 product CDS: hypothetical protein 3282969:3283697 forward MW:26247 93272 93204 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 93930 93415 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00074 product CDS: hypothetical protein 3282311:3282826 forward MW:18821 94277 94098 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00075 product CDS: hypothetical protein 3281964:3282143 forward MW:6136 94593 95429 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00076 product CDS: hypothetical protein 3280812:3281648 reverse MW:31090 96008 95793 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00077 product CDS hypothetical protein:3280448 forward MW:7702 96057 96461 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00078 product CDS: hypothetical protein 3279780:3280184 reverse MW:14322 96910 96530 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00079 product CDS: hypothetical protein 3279331:3279711 forward MW:14474 97154 97345 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00080 product CDS: hypothetical protein 3278896:3279087 reverse MW:6516 97572 98543 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00081 product CDS Ribonuclease BN:3278669 reverse MW:35633 98590 99129 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00082 product CDS Peptide deformylase:3277651 reverse MW:20051 99564 99154 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00083 product CDS Histone acetyltransferase HPA2:3277087 forward MW:15148 99694 100707 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00084 product CDS Histidine transporter, periplasmic histidine-binding protein:3276547 reverse MW:36716 99694 99768 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 100842 101342 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00085 product CDS: hypothetical protein 3274899:3275399 reverse MW:18214 101376 101813 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00086 product CDS Cytosine deaminase:3274865 reverse MW:15911 102098 102919 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00087 product CDS Hydrolase of unknown specificity RsbQ, part of a novel [RsbQ - PAS domain] bacterial sensing module:3274041 reverse MW:26081 102909 104084 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00088 product CDS Signal transduction histidine kinase:3273332 reverse MW:43623 104218 105429 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00089 product CDS Signal transduction histidine kinase:3272023 reverse MW:43694 105644 105964 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00090 product CDS: hypothetical protein 3270277:3270597 reverse MW:11080 105644 105718 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 106036 107199 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00091 product CDS Soluble aldose sugar dehydrogenase, PQQ-dependent:3270205 reverse MW:42799 106036 106110 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 107287 107622 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00092 product hypothetical protein 107890 110064 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00093 product CDS Ferrichrome-iron receptor:3268351 reverse MW:79957 107890 107976 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 110239 111555 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00094 product CDS Permeases of the major facilitator superfamily:3266002 reverse MW:47350 112070 112318 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00095 product CDS transcriptional regulator, LuxR family:3264171 reverse MW:9147 112507 113226 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00096 product CDS: hypothetical protein 3263015:3263734 reverse MW:27601 114058 114930 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00097 product CDS: hypothetical protein 3261311:3261955 reverse MW:24480 116011 114935 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00098 product CDS GGDEF domain protein:3261306 forward MW:36288 117525 116308 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00099 product CDS major facilitator family transporter:3259933 forward MW:41777 117636 118544 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00100 product CDS Transcriptional regulator, LysR family:3258605 reverse MW:32969 119170 118571 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00101 product CDS Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase):3257670 forward MW:20592 119170 119090 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 120116 119304 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00102 product CDS Surface lipoprotein:3256937 forward MW:30344 120116 120057 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 121407 120109 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00103 product CDS Surface lipoprotein:3256132 forward MW:48554 121407 121339 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 122060 121641 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_00104 product CrcZ 122474 123328 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00105 product CDS Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline- binding/permease protein:3253767 reverse MW:30869 122474 122548 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 123576 123887 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00106 product CDS Putative membrane protein, clustering with ActP:3252665 reverse MW:11429 123884 125542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00107 product CDS Acetate permease ActP (cation/acetate symporter):3252357 reverse MW:58729 123884 123946 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 125814 125656 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00108 product CDS: hypothetical protein 3250427:3250585 forward MW:5434 126139 126516 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00109 product CDS putative membrane protein:3250102 reverse MW:13987 126621 127436 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00110 product CDS Oxidoreductase, short chain dehydrogenase/reductase family:3249620 reverse MW:29716 127660 127992 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00111 note CDS Protein of unknown function UPF0060 3248249:3248581 reverse MW:12184 product hypothetical protein 128162 128356 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00112 product CDS Carbon storage regulator:3248079 reverse MW:7017 128586 128359 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00113 product CDS: hypothetical protein 3247655:3247882 forward MW:8764 129855 128659 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00114 product CDS Deblocking aminopeptidase @ Cyanophycinase 2 (EC 3.4.15.6):3247582 forward MW:43055 131686 129938 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00115 product CDS Cyanophycin synthase (EC 6.3.2.30):3246303 forward MW:64688 133462 131690 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00116 product CDS Asparagine synthetase [glutamine-hydrolyzing]:3244551 forward MW:65592 133627 133929 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00117 product hypothetical protein 133965 134369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00118 product CDS DNA-binding protein, CopG family:3242276 reverse MW:14455 135464 134385 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00119 product CDS AttH component of AttEFGH ABC transport system:3241856 forward MW:39777 137931 135454 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00120 product CDS AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system:3240787 forward MW:90263 138599 137931 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00121 product CDS AttE component of AttEFGH ABC transport system:3238310 forward MW:24419 140806 138824 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00122 product CDS 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC:3237417 forward MW:72369 140954 142450 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00123 product CDS UDP-galactose-lipid carrier transferase:3235287 reverse MW:57941 142735 142502 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00124 product CDS: hypothetical protein 3233458:3233739 forward MW:10273 143311 142910 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00125 note CDS Hypothetical protein DUF454 3232930:3233331 forward MW:14977 product hypothetical protein 143909 143322 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00126 product CDS: hypothetical protein 3232332:3232919 forward MW:21915 144086 146215 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00127 product CDS ATP-dependent DNA helicase RecQ:3232155 reverse MW:78843 146309 146743 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00128 product CDS Transcriptional regulator SlyA:3229932 reverse MW:16335 146840 149035 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00129 product CDS: hypothetical protein 3227206:3229401 reverse MW:77469 149688 151253 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00130 product CDS Methyl-accepting chemotaxis protein:3226553 reverse MW:56652 152129 155134 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00131 product CDS Serine protease:3224112 reverse MW:103679 152129 152236 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 36 product putative signal peptide 155242 158358 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00132 product CDS Serine protease:3220999 reverse MW:107363 155242 155370 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 43 product putative signal peptide 158438 158289 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00133 product hypothetical protein 158717 159007 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00134 product CDS: hypothetical protein 3217234:3217524 reverse MW:10491 158717 158785 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 159635 159060 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00135 product CDS Prophage antirepressor:3217181 forward MW:16320 160627 160127 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00136 product hypothetical protein 161293 160733 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00137 product hypothetical protein 161902 161330 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00138 product hypothetical protein 162705 161899 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00139 product CDS: hypothetical protein 3213536:3214342 forward MW:29610 163364 162708 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00140 product CDS: hypothetical protein 3212877:3213533 forward MW:23123 163733 165286 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00141 note CDS conserved domain protein 3210955:3212508 reverse MW:57680 product hypothetical protein 165283 166539 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00142 product CDS McrBC 5-methylcytosine restriction system component:3210958 reverse MW:48442 166740 168713 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00143 product CDS DNA mismatch repair protein MutL:3209501 reverse MW:75264 168941 169204 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00144 product hypothetical protein 169282 170436 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00145 product CDS DNA-cytosine methyltransferase:3207031 reverse MW:45371 170699 173242 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00146 product CDS hypothetical protein:3205542 reverse MW:95165 173267 175360 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00147 product CDS hypothetical protein:3202974 reverse MW:78179 175373 175936 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00148 product CDS Helicase:3200868 reverse MW:218528 176755 175946 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00149 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 177774 176752 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00150 product CDS ISPsy4, transposase:6120546 reverse MW:37529 177959 183214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00151 product CDS Helicase:3200868 reverse MW:218528 184688 183441 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00152 product CDS Ribonucleotide reductase of class Ia (aerobic), beta subunit:3194768 forward MW:47215 185926 185357 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00153 product CDS acetyltransferase, GNAT family:3192852 forward MW:21440 186679 186032 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00154 product CDS: hypothetical protein 3191530:3192177 forward MW:23625 187250 186801 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00155 product CDS: hypothetical protein 3190959:3191408 forward MW:16963 188037 187285 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00156 product CDS transcriptional regulator, Crp/Fnr family:3190924 forward MW:27794 188267 189178 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00157 product CDS Universal stress protein family 5:3189942 reverse MW:33481 189305 189216 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00158 product hypothetical protein 189495 190718 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00159 product CDS Acetate kinase:3188714 reverse MW:43469 190791 193298 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00160 product CDS Xylulose-5-phosphate phosphoketolase ; Fructose-6-phosphate phosphoketolase (EC 4.1.2.22):3187418 reverse MW:93034 196326 193414 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00161 product CDS Ribonucleotide reductase of class Ia (aerobic), alpha subunit:3184795 forward MW:107924 197030 197767 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00162 product CDS Transcriptional regulatory protein RstA:3181179 reverse MW:27286 197772 199382 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00163 product CDS Sensor histidine kinase:3180437 reverse MW:59953 199379 200086 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00164 product CDS Ferric reductase (1.6.99.14):3178830 reverse MW:25715 199379 199438 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 200812 200087 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00165 product CDS 4'-phosphopantetheinyl transferase entD ; Holo-[acyl-carrier protein] synthase, alternative (EC 2.7.8.7)3177388:3178122 forward MW:26765 201012 201545 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00166 product CDS Transposase:3177197 reverse MW:20945 203027 202239 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00167 product CDS Dienelactone hydrolase family:5791434 forward MW:28493 203027 202971 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 203205 203555 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00168 product CDS: hypothetical protein 5790118:5790468 reverse MW:12329 203205 203273 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 203583 204260 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00169 product CDS Transcriptional regulatory protein PhoP:5790090 reverse MW:25372 204257 205603 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00170 product CDS Sensor protein PhoQ:5789416 reverse MW:50179 205960 207312 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00171 product CDS Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate:5787713 reverse MW:47627 207871 207377 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00172 product CDS Protein sprT:5786296 forward MW:19550 208076 208900 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00173 product CDS tRNA(Cytosine32)-2-thiocytidine synthetase:5785355 reverse MW:22208 209578 208907 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00174 product CDS DNA-3-methyladenine glycosylase:5784764 forward MW:25432 210279 209674 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00175 product CDS Trp repressor binding protein:5783997 forward MW:21163 210629 210276 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00176 product CDS Arsenate reductase:5783395 forward MW:12799 210759 211226 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00177 product CDS thioredoxin, putative:5782912 reverse MW:16886 210759 210836 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 211779 211372 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00178 product CDS Heat shock protein:5782299 forward MW:15116 212213 211776 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00179 product CDS: hypothetical protein 5781458:5781895 forward MW:16285 215050 212297 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00180 product CDS BarA sensory histidine kinase (= VarS = GacS):5781374 forward MW:100232 215200 216225 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00181 product CDS Cysteine synthase B:5778348 reverse MW:32531 216225 217580 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00182 product CDS RNA methyltransferase, TrmA family:5777446 reverse MW:49380 217737 219980 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00183 product CDS GTP pyrophosphokinase , (p)ppGpp synthetase I:5775826 reverse MW:79973 220094 220927 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00184 product CDS Nucleoside triphosphate pyrophosphohydrolase MazG:5773577 reverse MW:31442 220958 221497 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00185 product CDS nucleoprotein/polynucleotide-associated enzyme:5772713 reverse MW:20405 221776 221597 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00186 product CDS: hypothetical protein 5771895:5772074 forward MW:6799 221982 222218 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00187 product hypothetical protein 222983 222270 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00188 product CDS: hypothetical protein 5770688:5771401 forward MW:26194 222983 222924 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 223642 222992 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00189 product CDS Phosphoribosylglycinamide formyltransferase:5770679 forward MW:23583 224700 223642 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00190 product CDS Phosphoribosylformylglycinamidine cyclo-ligase:5770029 forward MW:36982 225031 226131 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00191 product CDS: hypothetical protein 5767540:5768640 reverse MW:38455 225031 225096 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 226173 227246 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00192 product CDS Putative permease often clustered with de novo purine synthesis:5767498 reverse MW:38564 227395 228180 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00193 product CDS Chromosomal replication initiator protein DnaA:5766195 reverse MW:26645 228174 228938 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00194 product CDS NAD-dependent protein deacetylase of SIR2 family:5765497 reverse MW:27649 229014 229739 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00195 product CDS NLP/P60 family protein:5764630 reverse MW:25082 229014 229115 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 34 product putative signal peptide 229834 230379 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00196 product CDS NLP/P60 family protein:5763837 reverse MW:19228 229834 229902 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 231359 230763 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00197 product CDS Transposase:6130746 forward MW:30021 232114 231599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00198 product CDS ISPsy8, transposase OrfA:6129910 forward MW:19998 233816 232488 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00199 product CDS L-sorbosone dehydrogenase:5962028 reverse MW:47103 233816 233757 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 233936 234150 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_00200 product Cobalamin 234241 234852 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00201 product CDS Cob(I)alamin adenosyltransferase:5963064 forward MW:22633 234892 236187 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00202 product CDS Cobyrinic acid A,C-diamide synthase:5964399 forward MW:46077 236184 236834 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00203 product CDS Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family:5965046 forward MW:24000 236831 237739 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00204 product CDS Adenosylcobinamide-phosphate synthase:5965951 forward MW:32868 237732 238736 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00205 product CDS L-threonine 3-O-phosphate decarboxylase:5966948 forward MW:36886 238733 240193 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00206 product CDS Cobyric acid synthase:5968405 forward MW:52254 240194 240715 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00207 product CDS Adenosylcobinamide-phosphate guanylyltransferase:5968927 forward MW:18985 240712 241764 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00208 product CDS Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase:5969976 forward MW:36252 241761 242333 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00209 product CDS Alpha-ribazole-5'-phosphate phosphatase:5970545 forward MW:20761 242339 243070 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00210 product CDS Cobalamin synthase:5971282 forward MW:25648 243168 244376 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00211 product CDS Permeases of the major facilitator superfamily:5972588 forward MW:42211 244373 244495 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00212 product CDS: hypothetical protein 5972585:5972707 forward MW:4177 244554 245108 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00213 product CDS Glutathione peroxidase:5973320 forward MW:20251 244554 244622 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 247018 245744 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00214 product CDS Long-chain fatty acid transport protein:2368208 forward MW:45642 247018 246938 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 247478 247260 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00215 note CDS Conserved domain protein 2366399:2366692 forward MW:10995 product hypothetical protein 248264 247959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00216 product CDS: hypothetical protein 2365688:2365993 forward MW:10907 248909 250387 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00217 product CDS DNA recombination protein RmuC:2365043 reverse MW:55378 250582 250704 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00218 product CDS: hypothetical protein 2363248:2363403 reverse MW:5853 251109 250795 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00219 product CDS: hypothetical protein 2362843:2363157 forward MW:11981 251338 251937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00220 product CDS: hypothetical protein 2362015:2362557 reverse MW:19630 252038 253000 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00221 product CDS membrane protein, putative:2361914 reverse MW:34838 253639 253025 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00222 product CDS NAD(P)H dehydrogenase, quinone family:2360927 forward MW:22973 255026 253632 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00223 product CDS Fumarate hydratase class II:2360320 forward MW:49045 255196 255723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00224 product CDS: hypothetical protein 2358229:2358756 reverse MW:18871 255196 255264 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 255739 256032 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00225 product CDS Cell division protein BolA:2358213 reverse MW:10662 256204 257157 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00226 product CDS Rhodanese-like domain protein:2357748 reverse MW:35856 257161 257793 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00227 product CDS Thioredoxin:2356791 reverse MW:22795 257786 259612 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00228 product CDS ABC transporter, ATP-binding/permease protein:2356166 reverse MW:66449 259736 262192 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00229 product CDS Sensory box/GGDEF family protein:2354225 reverse MW:91029 262223 263008 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00230 product CDS Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C:2351729 reverse MW:29956 263965 263039 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00231 product CDS GGDEF domain protein:2350913 forward MW:34654 264953 264213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00232 product CDS Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases):2349739 forward MW:26267 265652 264981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00233 product CDS Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase:2348971 forward MW:24430 266354 265656 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00234 product CDS 3-demethylubiquinone-9 3-methyltransferase:2348296 forward MW:25933 267771 266440 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00235 product CDS S-adenosylhomocysteine deaminase ; Methylthioadenosine deaminase:2347512 forward MW:48064 267891 268967 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00236 product CDS Methylthioribose-1-phosphate isomerase:2346061 reverse MW:39040 269175 269259 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_00237 product gyrA 269271 272057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00238 product CDS DNA gyrase subunit A:2344681 reverse MW:102568 272243 273328 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00239 product CDS Phosphoserine aminotransferase:2341709 reverse MW:39652 273328 274422 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00240 product CDS Chorismate mutase I / Prephenate dehydratase (EC 4.2.1.51):2340624 reverse MW:40300 274480 276096 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00241 product CDS Cyclohexadienyl dehydrogenase (EC 1.3.1.43) / 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)2337856:2339472 reverse MW:57322 276093 276782 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00242 product CDS Cytidylate kinase:2337859 reverse MW:24602 276904 278595 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00243 product CDS SSU ribosomal protein S1p:2337048 reverse MW:62281 278917 279213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00244 product CDS Integration host factor beta subunit:2335035 reverse MW:11075 279238 279480 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00245 product CDS: hypothetical protein 2334472:2334714 reverse MW:8728 279893 281335 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00246 product CDS Metallo-beta-lactamase family protein, RNA-specific:2334059 reverse MW:53239 281508 282488 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00247 product CDS UDP-glucose 4-epimerase:2332444 reverse MW:34675 282481 283497 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00248 product CDS Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase:2331474 reverse MW:36406 283619 285592 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00249 product CDS nucleotide sugar epimerase/dehydratase WbpM:2330297 reverse MW:71167 285752 286081 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00250 product CDS Competence protein ComEA helix-hairpin-helix region precursor:2328203 reverse MW:11547 285752 285820 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 286758 286189 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00251 product CDS Transcriptional regulator, TetR family:2327766 forward MW:20855 287671 286832 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00252 product CDS Thioredoxin:2327123 forward MW:35501 288089 289366 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00253 product CDS Serine transporter:2325866 reverse MW:46237 289648 289442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00254 product CDS: hypothetical protein 2324307:2324513 forward MW:8003 290254 289772 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00255 product CDS Transcription elongation factor:2324183 forward MW:17598 290662 290258 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00256 product CDS: hypothetical protein 2323293:2323697 forward MW:15080 290858 291994 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00257 product CDS: hypothetical protein 2321961:2323178 reverse MW:45872 292094 292663 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00258 product CDS Translation elongation factor P:2321861 reverse MW:21138 293774 292755 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00259 product CDS Lipase:2321200 forward MW:36422 293774 293706 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 294234 293815 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00260 product CDS Organic hydroperoxide resistance protein:2320140 forward MW:14158 294924 294451 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00261 product CDS Organic hydroperoxide resistance transcriptional regulator:2319504 forward MW:17385 295125 295856 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00262 product CDS putative membrane protein:2318845 reverse MW:26395 296736 295846 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00263 product CDS Transcriptional regulator, LysR family:2318109 forward MW:32870 296795 297028 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00264 product CDS: hypothetical protein 2316927:2317160 reverse MW:8853 298402 297056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00265 product CDS 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase II:2316899 forward MW:49965 298574 299335 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00266 product CDS Spermidine synthase-like protein:2315381 reverse MW:28350 299790 301478 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00267 product CDS Cold-shock DEAD-box protein A:2314165 reverse MW:61263 302332 301565 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00268 product CDS Putative cytoplasmic protein:2312390 forward MW:27886 302435 303097 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00269 product CDS Thiopurine S-methyltransferase:2311520 reverse MW:24818 304269 303382 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00270 product CDS Probable protease htpX:2310573 forward MW:32299 305749 304538 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00271 product CDS Aspartate/tyrosine/aromatic aminotransferase:2309417 forward MW:44891 305754 306335 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00272 product CDS Peptide methionine sulfoxide reductase MsrB:2308207 reverse MW:21775 306471 306956 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00273 product CDS Glutathione peroxidase family protein:2307484 reverse MW:17863 309313 306962 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00274 product CDS sensor histidine kinase/response regulator:2306993 forward MW:86095 309394 310284 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00275 product CDS putative ATP/GTP-binding protein:2304549 reverse MW:33473 310281 310763 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00276 product CDS GAF domain protein:2303674 reverse MW:17192 311586 310816 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00277 product CDS: hypothetical protein 2302381:2303139 forward MW:28355 311881 311956 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00278 product tRNA-Glu(ttc) 311959 312034 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00279 product tRNA-Gly(gcc) 312134 312209 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00280 product tRNA-Glu(ttc) 312214 312289 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00281 product tRNA-Gly(gcc) 313119 312397 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00282 product CDS Pirin:2301558 forward MW:26441 313308 314213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00283 product CDS Transcriptional regulator, LysR family:2300647 reverse MW:33673 314358 315329 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00284 product CDS Alkanesulfonates-binding protein:2299642 reverse MW:36198 314358 314444 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 315358 317628 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00285 product CDS Trimethylamine-N-oxide reductase (Cytochrome c):2298597 reverse MW:83203 318829 317636 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00286 product CDS Butyryl-CoA dehydrogenase:2296319 forward MW:43385 319851 318862 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00287 product CDS Alkanesulfonates-binding protein:2295093 forward MW:35140 319851 319759 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 321623 320040 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00288 product CDS Rhodanese-related sulfurtransferase:2293915 forward MW:57780 322234 321620 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00289 product CDS Cysteine dioxygenase:2292335 forward MW:22643 322391 323359 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00290 product CDS Transcriptional regulator, LysR family:2291501 reverse MW:32647 324509 323421 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00291 product CDS Alkanesulfonate monooxygenase:2290534 forward MW:39606 324768 325625 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00292 product CDS Alkanesulfonates transport system permease protein:2289187 reverse MW:31271 325628 326440 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00293 product CDS Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB:2288327 reverse MW:29219 326492 326794 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00294 product CDS SelT/selW/selH selenoprotein domain:2287463 reverse MW:11196 326887 327708 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00295 product CDS Ser/Thr protein phosphatase family protein, UDP-2,3-diacylglucosamine hydrolase:2287068 reverse MW:31363 328035 327724 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00296 product CDS: hypothetical protein 2285920:2286231 forward MW:11854 330118 328664 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00297 product CDS Potassium uptake protein TrkH:2285291 forward MW:52914 330293 330853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00298 product CDS Nitroreductase family protein:2283662 reverse MW:19932 332216 330867 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00299 product CDS Putative two-component system sensor kinase:2283088 forward MW:50368 332767 332303 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00300 product CDS P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein:2281652 forward MW:17616 332767 332705 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 333637 332960 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00301 product CDS DNA-binding response regulator:2280995 forward MW:24900 334058 333645 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00302 product CDS Translation initiation factor 2 (IF-2; GTPase):2280310 forward MW:15425 334058 333993 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 334502 334203 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00303 product CDS YciL protein:2279752 forward MW:10504 335100 334504 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00304 product CDS Intracellular septation protein IspA:2279451 forward MW:22456 335166 336029 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00305 product CDS, Predicted metal-dependent phosphoesterases (PHP family) 2277926:2278789 reverse MW:30933 336043 336672 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00306 product CDS: Possible translation factor Sua5/YciO/YrdC/YwlC family 2277283:2277912 reverse MW:22877 336672 337490 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00307 product CDS Segregation and condensation protein A:2277283 reverse MW:30599 337506 338279 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00308 product CDS Segregation and condensation protein B:2276449 reverse MW:29242 338452 338643 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00309 product CDS: hypothetical protein 2275312:2275503 reverse MW:7185 338828 340054 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00310 product CDS Ribosomal large subunit pseudouridine synthase B ## LSU 2273901:2275127 reverse MW:45645 340326 341735 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00311 product CDS Aromatic amino acid transport protein AroP:2273629 reverse MW:50817 341767 342180 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00312 product CDS Hypothetical protein YaeJ with similarity to translation release factor:2272188 reverse MW:15207 343682 342483 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00313 product CDS Transporter, putative:2271472 forward MW:41420 343999 343820 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00314 product CDS: hypothetical protein 2269956:2270135 forward MW:6377 344226 344086 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00315 product CDS: hypothetical protein 2269729:2269869 forward MW:4902 344808 344452 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00316 product CDS Pterin-4-alpha-carbinolamine dehydratase:2269503 forward MW:13190 345640 344843 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00317 product CDS Phenylalanine-4-hydroxylase:2269112 forward MW:30269 345915 347519 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00318 product CDS Phenylalanine hydroxylase transcriptional activator PhhR:2268040 reverse MW:58820 347843 347577 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00319 product CDS Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit:2266378 forward MW:9421 347843 347784 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 348200 350155 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00320 product CDS Acetyl-coenzyme A synthetase:2265677 reverse MW:68802 350689 351465 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00321 product CDS Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein:2263266 reverse MW:27934 350689 350754 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 351550 352239 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00322 product CDS Arginine/ornithine ABC transporter, permease protein AotQ:2262405 reverse MW:24848 352236 352934 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00323 product CDS Arginine/ornithine ABC transporter, permease protein AotM:2261719 reverse MW:25968 352936 354048 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00324 product CDS Succinylglutamate desuccinylase/aspartoacylase:2261019 reverse MW:40363 354071 354835 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00325 product CDS Arginine/ornithine ABC transporter, ATP-binding protein AotP:2259884 reverse MW:28035 354971 355963 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00326 product CDS Arginine pathway regulatory protein ArgR, repressor of arg regulon:2259047 reverse MW:39069 356200 357417 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00327 product CDS Succinylornithine transaminase:2257755 reverse MW:43431 357551 358582 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00328 product CDS Arginine N-succinyltransferase, alpha subunit:2256404 reverse MW:37341 358646 359671 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00329 product CDS Arginine N-succinyltransferase:2255309 reverse MW:37349 359671 361137 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00330 product CDS Succinylglutamic semialdehyde dehydrogenase:2254284 reverse MW:51359 361237 362583 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00331 product CDS Succinylarginine dihydrolase:2252718 reverse MW:48861 362645 362932 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00332 product CDS Putative GTPases (G3E family):2251310 reverse MW:10468 362944 363951 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00333 product CDS Succinylglutamate desuccinylase:2251011 reverse MW:37405 364602 364090 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00334 product CDS 6,7-dimethyl-8-ribityllumazine synthase:2249865 forward MW:18773 364897 364731 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_00335 product FMN 364948 366114 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00336 product CDS Low-specificity L-threonine aldolase:2248926 reverse MW:38523 366259 368883 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00337 product CDS Alanyl-tRNA synthetase:2247696 reverse MW:94496 368974 370206 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00338 product CDS Aspartokinase:2244981 reverse MW:44459 370378 370566 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00339 product CDS Carbon storage regulator:2243577 reverse MW:6953 370629 370719 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00340 product tRNA-Ser(gct) 370829 370905 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00341 product tRNA-Arg(acg) 370993 371069 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00342 product tRNA-Arg(acg) 371604 371113 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00343 product CDS: hypothetical protein 2242351:2242842 forward MW:17727 371604 371536 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 371928 373370 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00344 product CDS Magnesium transporter:2242027 reverse MW:53401 373904 373587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00345 product CDS Alginate biosynthesis transcriptional activator:2240368 forward MW:12046 374528 374343 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00346 product CDS: hypothetical protein 2239427:2239612 forward MW:6530 375079 374564 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00347 product CDS: hypothetical protein 2238972:2239391 forward MW:15448 375120 375196 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00348 product tRNA-Arg(cct) 375475 375999 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00349 product hypothetical protein 378525 376111 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00350 product CDS Potassium efflux system KefA protein / Small-conductance mechanosensitive channel:2237844 forward MW:86256 378525 378442 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 379070 379459 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00351 product CDS: hypothetical protein 2234496:2234885 reverse MW:14125 379569 381650 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00352 product CDS TonB-dependent receptor:2234290 reverse MW:74739 379569 379685 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 39 product putative signal peptide 382705 381728 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00353 product CDS Transcriptional regulator, AraC family:2232227 forward MW:35393 382976 383521 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00354 product CDS Isochorismatase:2230979 reverse MW:19179 384078 383617 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00355 product CDS Cell division inhibitor:2230338 forward MW:13034 384994 384182 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00356 product CDS 3-oxoacyl-[acyl-carrier protein] reductase:2229773 forward MW:28944 386073 385072 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00357 product CDS Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) ; Similar to arginate lyase:2228883 forward MW:35495 387013 386153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00358 product CDS Hydrolase, alpha/beta fold family:2227802 forward MW:31100 387818 387030 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00359 product CDS Probable short-chain dehydrogenase:2226925 forward MW:28075 388942 387860 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00360 product CDS NADH:flavin oxidoreductase/NADH oxidase family protein:2226095 forward MW:38380 389805 389206 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00361 product CDS Transcriptional regulator, TetR family:2224749 forward MW:21834 389937 390827 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00362 product CDS Hydrolase:2224018 reverse MW:33046 392272 390860 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00363 product CDS Homospermidine synthase:2223095 forward MW:51210 392848 392636 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00364 product CDS: hypothetical protein 2220996:2221319 forward MW:12020 395036 392961 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00365 product CDS Signal transduction histidine kinase:2220994 forward MW:74665 396835 395384 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00366 product CDS Hydantoin permease:2218571 forward MW:53097 397179 397898 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00367 product CDS Transcriptional regulator, GntR family:2216776 reverse MW:26411 397909 398640 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00368 product CDS Hydantoin racemase:2216046 reverse MW:25664 400018 398783 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00369 product CDS Uncharacterized zinc-type alcohol dehydrogenase-like protein ybdR:2215172 forward MW:43707 401028 400123 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00370 product CDS Transcriptional regulator:2213832 forward MW:33276 401189 402079 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00371 product CDS 3-hydroxyisobutyrate dehydrogenase:2212766 reverse MW:30334 402083 403600 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00372 product CDS Aldehyde dehydrogenase:2211872 reverse MW:54023 403605 404762 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00373 product CDS Peptidase M20D, amidohydrolase:2210350 reverse MW:41341 406135 405194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00374 product CDS Transcriptional regulator, LysR family:2208761 forward MW:34545 406271 407053 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00375 product CDS: hypothetical protein 2206902:2207684 reverse MW:30099 407060 407701 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00376 product CDS Efflux protein, LysE family:2206895 reverse MW:23230 409091 407715 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00377 product CDS L-serine dehydratase:2206240 forward MW:49203 409220 410131 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00378 product CDS Transcriptional regulator, LysR family:2204735 reverse MW:34007 411472 410144 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00379 product CDS membrane protein, putative:2203811 forward MW:46118 413282 411894 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00380 product CDS Putative cytoplasmic protein:2202061 forward MW:50954 414553 413306 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00381 product CDS Aminotransferase class-III:2200649 forward MW:44330 414818 416308 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00382 product CDS L-pipecolate dehydrogenase:2199137 reverse MW:53344 416351 417640 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00383 product CDS L-pipecolate oxidase (1.5.3.7):2197604 reverse MW:45904 419026 417653 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00384 product CDS Sensory histidine kinase QseC:2196302 forward MW:50754 419685 419023 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00385 product CDS Two-component system response regulator QseB:2194932 forward MW:24718 419853 420116 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00386 product CDS Probable signal peptide protein:2194102 reverse MW:9879 419853 419909 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 420116 420661 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00387 product CDS Cytochrome b561 family protein:2193839 reverse MW:20630 420700 421998 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00388 product CDS BNR/Asp-box repeat protein:2193255 reverse MW:47202 421995 422615 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00389 product CDS membrane protein, putative:2191960 reverse MW:22573 422626 424659 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00390 product CDS Sulfatase family protein:2191329 reverse MW:76367 425016 425630 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00391 product CDS bacteriophytochrome heme oxygenase BphO:2188939 reverse MW:22585 425627 427861 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00392 product CDS Phytochrome, two-component sensor histidine kinase:2188328 reverse MW:82159 428600 427914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00393 product CDS Permeases of the major facilitator superfamily:2186041 forward MW:25722 431995 428597 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00394 product CDS membrane protein, putative:4705830 forward MW:39040 433659 432334 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00395 product CDS D-glycerate transporter (predicted):1133477 forward MW:48209 435170 433986 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00396 product CDS P-hydroxybenzoate hydroxylase:1131825 forward MW:44190 435321 436190 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00397 product CDS Transcriptional regulator PobR, AraC family:1130490 reverse MW:33210 437666 436242 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00398 product CDS Decarboxylase family protein:1129569 forward MW:52637 438066 438740 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00399 product CDS Arylsulfatase:1127745 reverse MW:24142 439139 440740 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00400 product CDS Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY:1126672 reverse MW:58559 440737 441432 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00401 product CDS Osmosensitive K+ channel histidine kinase KdpD:1125074 reverse MW:25156 441693 441899 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00402 product CDS: hypothetical protein 1123912:1124118 reverse MW:7439 441954 442715 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00403 product CDS Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases):1123857 reverse MW:26760 442712 443353 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00404 product CDS bacterial transferase, hexapeptide repeat protein:1123084 reverse MW:21554 443353 444375 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00405 product CDS 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII:1122431 reverse MW:36495 445672 444425 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00406 product CDS MULTIDRUG RESISTANCE PROTEIN 1:1121386 forward MW:33698 449462 445941 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00407 product CDS Glycosyl transferase, group 2 family protein:1119870 forward MW:129283 450262 449537 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00408 product CDS Glycosyltransferase:1116274 forward MW:27440 451380 450262 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00409 product CDS Aminotransferase, DegT/DnrJ/EryC1/StrS family:1115549 forward MW:41928 451678 453021 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00410 product CDS glutamine synthetase family protein:1114133 reverse MW:48652 453076 454455 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00411 product CDS Transporter, MFS superfamily:1112735 reverse MW:49464 455298 454552 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00412 product CDS: hypothetical protein 1110570:1111259 forward MW:26660 455848 455381 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00413 product CDS Flagellar biosynthesis protein FlgN:1110430 forward MW:16984 456212 455898 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00414 product CDS Negative regulator of flagellin synthesis FlgM:1109913 forward MW:10985 457131 456373 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00415 product CDS Flagellar basal-body P-ring formation protein FlgA:1109438 forward MW:27330 457210 458136 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00416 product CDS Chemotaxis protein CheV:1108532 reverse MW:31553 458188 459015 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00417 product CDS Chemotaxis protein methyltransferase CheR:1107608 reverse MW:30427 459972 459094 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00418 product CDS Cyn operon transcriptional activator:1106717 forward MW:31974 460082 460549 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00419 product CDS Cyanate hydratase:1105729 reverse MW:17021 460560 461033 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00420 product CDS COGs 1104778:1105251 reverse MW:18571 461308 461715 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00421 product CDS Flagellar basal-body rod protein FlgB:1104503 reverse MW:14743 461719 462159 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00422 product CDS Flagellar basal-body rod protein FlgC:1104092 reverse MW:15723 462175 462864 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00423 product CDS Flagellar basal-body rod modification protein FlgD:1103636 reverse MW:23543 462890 464215 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00424 product CDS Flagellar hook protein FlgE:1102921 reverse MW:45786 464405 466165 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00425 product CDS Flagellar hook protein FlgE:1101406 reverse MW:61415 466357 466166 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00426 product CDS: hypothetical protein 1099454:1099645 forward MW:6888 466357 466283 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 466641 467381 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00427 product CDS Flagellar basal-body rod protein FlgF:1099170 reverse MW:26074 467428 468216 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00428 product CDS Flagellar basal-body rod protein FlgG:1098383 reverse MW:27463 468301 469014 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00429 product CDS Flagellar L-ring protein FlgH:1097510 reverse MW:24835 468301 468399 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 33 product putative signal peptide 469028 470137 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00430 product CDS Flagellar P-ring protein FlgI:1096783 reverse MW:37990 469028 469096 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 470148 471398 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00431 product CDS Flagellar protein FlgJ [peptidoglycan hydrolase]:1095663 reverse MW:44251 471410 473470 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00432 product CDS Flagellar hook-associated protein FlgK:1094401 reverse MW:69976 473484 475076 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00433 product CDS Flagellar hook-associated protein FlgL:1092327 reverse MW:54767 475165 478740 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00434 product CDS Glycosyl transferase, group 2 family protein:1090568 reverse MW:131121 478872 481778 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00435 product CDS Glycosyl transferase, group 2 family protein:1086939 reverse MW:106484 482064 482990 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00436 product CDS 3-oxoacyl-[acyl-carrier-protein] synthase III:1083747 reverse MW:32982 483320 484168 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00437 product CDS Flagellin protein FlaA:1082491 reverse MW:29310 484241 484633 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00438 product CDS Flagellin protein FlaG:1081570 reverse MW:13978 484717 486189 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00439 product CDS Flagellar hook-associated protein FliD:1081094 reverse MW:49217 486315 486704 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00440 product CDS Flagellar biosynthesis protein FliS:1079487 reverse MW:13742 486730 487026 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00441 product CDS: hypothetical protein 1078785:1079081 reverse MW:10827 487203 488678 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00442 product CDS Flagellar regulatory protein FleQ:1078608 reverse MW:55507 488801 490015 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00443 product CDS Flagellar sensor histidine kinase FleS:1077010 reverse MW:43979 490015 491430 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00444 product CDS Flagellar regulatory protein FleQ:1075796 reverse MW:50790 491672 492001 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00445 product CDS Flagellar hook-basal body complex protein FliE:1074091 reverse MW:9810 492017 493801 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00446 product CDS Flagellar M-ring protein FliF:1073794 reverse MW:63167 493794 494810 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00447 product CDS Flagellar motor switch protein FliG:1072002 reverse MW:36389 494826 495644 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00448 product CDS Flagellar assembly protein FliH:1070985 reverse MW:30108 495634 496992 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00449 product CDS Flagellum-specific ATP synthase FliI:1070177 reverse MW:48582 496999 497448 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00450 product CDS Flagellar protein FliJ:1068812 reverse MW:17514 497531 497833 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00451 product CDS Anti-Sigma-factor antagonist:1068241 reverse MW:9840 497838 499544 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00452 product CDS Serine phosphatase RsbU, regulator of sigma subunit:1067973 reverse MW:61940 499578 499934 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00453 product CDS Hpt domain protein:1066233 reverse MW:13298 500033 501457 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00454 product CDS Flagellar hook-length control protein FliK:1065778 reverse MW:48663 502012 502515 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00455 product CDS Flagellar biosynthesis protein FliL:1063799 reverse MW:18001 502525 503493 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00456 product CDS Flagellar motor switch protein FliM:1063286 reverse MW:35961 503555 504013 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00457 product CDS Flagellar motor switch protein FliN:1062256 reverse MW:16013 504014 504454 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00458 product CDS Flagellar biosynthesis protein FliO:1061797 reverse MW:16014 504014 504088 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 504454 505206 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00459 product CDS Flagellar biosynthesis protein FliP:1061357 reverse MW:27115 504454 504519 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 505232 505501 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00460 product CDS Flagellar biosynthesis protein FliQ:1060579 reverse MW:9922 505517 506293 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00461 product CDS Flagellar biosynthesis protein FliR:1060303 reverse MW:28147 506295 507431 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00462 product CDS Flagellar biosynthesis protein FlhB:1059516 reverse MW:41714 507816 509945 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00463 product CDS Flagellar biosynthesis protein FlhA:1057995 reverse MW:76214 509957 511285 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00464 product CDS Flagellar biosynthesis protein FlhF:1055854 reverse MW:48303 511401 512234 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00465 product CDS Flagellar synthesis regulator FleN:1054410 reverse MW:29751 512231 512971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00466 product CDS RNA polymerase sigma factor for flagellar operon:1053559 reverse MW:26853 513225 513599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00467 product CDS Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY:1052598 reverse MW:14357 513619 514404 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00468 product CDS Chemotaxis response - phosphatase CheZ:1052192 reverse MW:29474 514438 516678 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00469 product CDS Signal transduction histidine kinase CheA:1051373 reverse MW:79203 516729 517901 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00470 product CDS Chemotaxis response regulator protein-glutamate methylesterase CheB:1049082 reverse MW:41099 517901 518641 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00471 product CDS Flagellar motor rotation protein MotA:1047910 reverse MW:26074 518648 519535 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00472 product CDS Flagellar motor rotation protein MotB:1047163 reverse MW:32213 519581 520369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00473 product CDS ATPases involved in chromosome partitioning:1046230 reverse MW:28455 520445 521332 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00474 product CDS CheW domain protein:1045339 reverse MW:31017 521390 521869 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00475 product CDS Positive regulator of CheA protein activity (CheW):1044421 reverse MW:17625 521870 522271 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00476 product CDS: hypothetical protein 1043540:1043941 reverse MW:14776 522950 522402 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00477 product CDS Adenine phosphoribosyltransferase:1043409 forward MW:20112 523746 523012 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00478 product CDS transcriptional activator Anr:1042799 forward MW:27203 523900 524367 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00479 product CDS: hypothetical protein 1041444:1041911 reverse MW:16489 525769 524387 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00480 product CDS Coproporphyrinogen III oxidase, oxygen-independent:1041424 forward MW:52596 526548 525865 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00481 note CDS Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein 1039263:1039946 forward MW:24235 product hypothetical protein 526744 526541 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00482 product CDS Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion:1039270 forward MW:4573 529194 526723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00483 product CDS Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase:1039087 forward MW:88671 529733 529197 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00484 product CDS Putative analog of CcoH, 1036077:1036613 forward MW:20040 531156 529744 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00485 product CDS Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation:1036066 forward MW:53238 531673 531221 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00486 product CDS Plasmid stability-like protein:1034589 forward MW:16708 531924 531673 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00487 product CDS Prevent-host-death family protein:1034137 forward MW:8993 533039 532062 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00488 product CDS Cytochrome c oxidase subunit CcoP:1033748 forward MW:35720 533236 533036 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00489 product CDS Cytochrome c oxidase subunit CcoQ:1032774 forward MW:7338 533841 533233 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00490 product CDS Cytochrome c oxidase subunit CcoO:1032577 forward MW:22199 535283 533841 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00491 product CDS Cytochrome c oxidase subunit CcoN:1031969 forward MW:53613 535579 536268 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00492 product CDS Esterase/lipase/thioesterase family active site:1030297 reverse MW:27228 536728 536270 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00493 product CDS: hypothetical protein 1029178:1029540 forward MW:13916 539765 536820 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00494 product CDS: hypothetical protein 1026045:1028990 forward MW:104462 541645 539816 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00495 product CDS: hypothetical protein 1024165:1025994 forward MW:66137 541966 544194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00496 product CDS autotransporter:1023157 reverse MW:54370 544795 544259 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00497 product CDS: hypothetical protein 1021015:1021551 forward MW:20153 545896 545234 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00498 product CDS: hypothetical protein 1019959:1020576 forward MW:22420 547778 546213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00499 product CDS Aerotaxis receptor Aer:1019597 forward MW:57030 548666 547875 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00500 product CDS CAAX amino terminal protease family protein:1017935 forward MW:27751 551540 548796 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00501 product CDS Aconitate hydratase:1017014 forward MW:99185 551543 551716 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00502 product hypothetical protein 551720 552793 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00503 product CDS Putative RNA 2'-O-ribose methyltransferase mtfA:1014090 reverse MW:40335 552860 553114 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00504 product CDS tRNA 5-methylaminomethyl-2-thiouridine synthase TusA:1012950 reverse MW:9406 553203 554345 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00505 product CDS Erythronate-4-phosphate dehydrogenase:1012607 reverse MW:41617 554737 554567 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00506 product CDS hypothetical protein:1011243 forward MW:6221 555025 556794 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00507 product CDS ABC transporter, ATP-binding/permease protein:1010785 reverse MW:63881 557129 556848 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00508 product CDS Putative cytoplasmic protein:1008962 forward MW:10329 557785 557243 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00509 product CDS Inhibitor of the KinA pathway to sporulation, predicted exonuclease:1008567 forward MW:20824 558042 558881 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00510 product CDS Periplasmic binding protein:1007702 reverse MW:29348 559092 558925 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00511 product CDS: hypothetical protein 1006718:1006885 forward MW:6322 560539 559175 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00512 product CDS Ethanolamine permease:1006635 forward MW:48178 560831 561529 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00513 product CDS Orotidine 5'-phosphate decarboxylase:1004979 reverse MW:24580 562710 561703 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00514 product CDS Putative NADP-dependent oxidoreductase 1003100:1004107 forward MW:35866 562875 563876 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00515 product CDS Muramoyltetrapeptide carboxypeptidase:1002935 reverse MW:34974 564381 563890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00516 product CDS Benzoate transport protein:1001920 forward MW:17199 564430 565032 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00517 product CDS Glutathione S-transferase, unnamed subgroup:1001380 reverse MW:23016 565064 565507 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00518 product CDS lipoprotein, putative:1000746 reverse MW:16012 565064 565132 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 565841 565470 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00519 product CDS Glutaredoxin:1000340 forward MW:14184 566467 565922 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00520 product CDS GTP cyclohydrolase I type 1:999888 forward MW:20052 567507 566950 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00521 product CDS Smr domain protein:998860 forward MW:20808 567871 567554 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00522 product CDS: hypothetical protein 997939:998256 forward MW:11263 568608 568018 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00523 product CDS Isochorismatase:997792 forward MW:21028 568870 569778 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00524 product CDS Hypothetical adenine-specific methylase yfcB:996940 reverse MW:34154 570661 569858 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00525 product CDS: hypothetical protein 995149:995952 forward MW:30674 571789 570758 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00526 product CDS Hydrolase, alpha/beta fold family:995052 forward MW:37026 571931 573022 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00527 product CDS Chorismate synthase:993879 reverse MW:38965 573039 574223 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00528 product CDS Nucleoside:H+ symporter:Major facilitator superfamily:992771 reverse MW:43328 574220 574834 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00529 product CDS Methylthioribulose-1-phosphate dehydratase:991590 reverse MW:22623 574911 575456 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00530 product CDS 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase:990899 reverse MW:20449 575473 576156 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00531 product CDS 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase:990337 reverse MW:24637 576431 577153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00532 product CDS DNA-binding HTH domain-containing proteins:989379 reverse MW:27160 577563 577285 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00533 product CDS: hypothetical protein 988247:988525 forward MW:10504 577926 578471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00534 product CDS FOG: Ankyrin repeat:987884 reverse MW:19043 578570 579088 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00535 product CDS: hypothetical protein 986722:987240 reverse MW:18736 580002 579085 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00536 product CDS Metal transporter, ZIP family:986725 forward MW:31238 580157 580348 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00537 product CDS: hypothetical protein 985462:985653 reverse MW:6732 580547 581407 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00538 product CDS Spermidine synthase:985263 reverse MW:32055 581672 583759 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00539 product CDS Phosphoglycerol transferase, alkaline phosphatase superfamily:984138 reverse MW:77861 583950 584186 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00540 product CDS: hypothetical protein 981624:981860 reverse MW:8989 584433 584774 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00541 product CDS Superfamily II DNA/RNA helicases, SNF2 family:981377 reverse MW:13089 584774 584962 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00542 product CDS: hypothetical protein 980848:980970 reverse MW:4675 585283 586692 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00543 note CDS Protein containing domains DUF404, DUF407 979118:980527 reverse MW:52478 product hypothetical protein 586705 587664 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00544 note CDS Protein containing domains DUF403 978146:979105 reverse MW:36091 product hypothetical protein 587661 588491 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00545 product CDS Protein containing transglutaminase-like domain, putative cysteine protease:978149 reverse MW:31041 588906 588535 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00546 product CDS Rhodanese-related sulfurtransferase:977275 forward MW:13353 588906 588850 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 589081 588974 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00547 product CDS: hypothetical protein 976687:976836 forward MW:5803 589523 590251 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00548 product CDS glutamine amidotransferase, class I:976287 reverse MW:27319 591282 590311 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00549 product CDS magnesium and cobalt transport protein, putative:975499 forward MW:36630 592097 591408 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00550 product CDS Enoyl-CoA hydratase/isomerase family protein:974402 forward MW:24366 592516 592223 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00551 product CDS: hypothetical protein 973294:973587 forward MW:11130 592682 593011 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00552 product CDS: hypothetical protein 972799:973128 reverse MW:12153 593432 593013 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00553 product CDS ABC-type Fe3+ transport system, periplasmic component:972797 forward MW:15483 593432 593367 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 593583 593768 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00554 product CDS: hypothetical protein 972042:972227 reverse MW:6567 594188 593820 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00555 product CDS Cytochrome c2:971990 forward MW:13480 594188 594126 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 594786 594256 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00556 product CDS: hypothetical protein 971024:971554 forward MW:19363 594786 594718 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 595509 595006 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00557 product CDS auxin-binding protein, putative:970804 forward MW:18488 595766 595897 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00558 product CDS hypothetical protein:970038 reverse MW:4463 596346 596248 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00559 product hypothetical protein 597166 597921 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00560 product CDS phage integrase:967237 forward MW:46171 597912 598328 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00561 product CDS phage integrase:967237 forward MW:46171 599805 598573 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00562 product CDS phage integrase:967237 forward MW:46171 600017 599802 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00563 product CDS hypothetical protein:966008 forward MW:8365 600824 600087 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00564 product CDS Serine/threonine protein phosphatase 1:965723 forward MW:26428 601062 600874 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00565 product hypothetical protein 601373 601059 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00566 product CDS: hypothetical protein 1633199:1633534 forward MW:12805 601765 601583 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00567 product CDS hypothetical protein:964307 forward MW:5089 602676 601762 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00568 product CDS hypothetical protein:1632831 forward MW:33912 603260 602673 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00569 product CDS: hypothetical protein 1631333:1631920 forward MW:23296 603260 603201 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 604772 603276 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00570 product CDS DNA-cytosine methyltransferase:962947 forward MW:52741 606110 604818 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00571 product CDS Adenine-specific methyltransferase:961405 forward MW:46292 606751 606173 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00572 product CDS hypothetical protein:960050 forward MW:22145 607396 606902 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00573 product hypothetical protein 608033 607413 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00574 product CDS hypothetical protein:958810 forward MW:21868 608374 608063 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00575 product CDS: hypothetical protein 957930:958160 forward MW:8416 608712 608365 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00576 product CDS: hypothetical protein 957511:957858 forward MW:13019 608988 608800 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00577 product CDS hypothetical protein:957423 forward MW:7206 609981 609490 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00578 product CDS Single-stranded DNA-binding protein:956733 forward MW:18214 610844 609978 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00579 product CDS Putative bacteriophage protein:956245 forward MW:31201 610996 610853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00580 product CDS hypothetical protein:955370 forward MW:4986 612167 611004 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00581 product CDS TolA protein:955219 forward MW:43787 612340 612224 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00582 product CDS hypothetical protein:953999 forward MW:4475 612546 612337 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00583 product CDS hypothetical protein:953886 forward MW:7668 613100 612543 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00584 product CDS hypothetical protein:953680 forward MW:7836 613348 613097 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00585 product CDS hypothetical protein:953126 forward MW:9458 613587 613345 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00586 product CDS hypothetical protein:952878 forward MW:8701 613787 613605 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00587 product hypothetical protein 614068 613808 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00588 product hypothetical protein 615210 614947 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00589 product hypothetical protein 615403 615272 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00590 product hypothetical protein 616614 616294 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00591 product CDS hypothetical protein:949840 forward MW:9066 617150 616941 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00592 product hypothetical protein 618044 617397 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P44207 locus_tag NYT1canu_00593 product putative HTH-type transcriptional regulator 618300 618497 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00594 product CDS Cro-like protein:948413 reverse MW:7513 618527 618718 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00595 product hypothetical protein 618739 618987 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00596 product hypothetical protein 619075 619881 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00597 product hypothetical protein 619878 620333 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00598 product hypothetical protein 620330 621124 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00599 product hypothetical protein 621114 621932 CDS gene dnaC inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P0AEF0 locus_tag NYT1canu_00600 product DNA replication protein DnaC 621932 622162 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00601 product CDS hypothetical protein:945122 reverse MW:8731 622159 622419 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00602 product CDS hypothetical protein:944895 reverse MW:9828 622416 622604 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00603 product CDS hypothetical protein:944638 reverse MW:6834 622601 623059 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00604 product CDS hypothetical protein:944453 reverse MW:16704 623056 623379 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00605 product hypothetical protein 623376 624152 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00606 product CDS hypothetical protein:943998 reverse MW:20354 624145 624615 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00607 product CDS hypothetical protein:943439 reverse MW:17735 624612 624926 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00608 product CDS: hypothetical protein 942658:942972 reverse MW:11265 624917 625507 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00609 product CDS Protein NinG:942667 reverse MW:22157 625504 626049 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00610 product CDS: hypothetical protein 941535:942077 reverse MW:20265 626556 626227 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00611 product hypothetical protein 626671 627042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00612 product CDS Methyl-accepting chemotaxis protein:940913 reverse MW:13392 627042 627380 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00613 product CDS lipoprotein, putative:940542 reverse MW:12405 627436 627666 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00614 product CDS NAD/FAD-utilizing enzyme apparently involved in cell division:940148 reverse MW:8384 627830 628027 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00615 product CDS: hypothetical protein 939557:939754 reverse MW:6839 628036 628515 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00616 product CDS: hypothetical protein 939102:939548 reverse MW:15772 628532 629104 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00617 product hypothetical protein 629104 629625 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00618 product hypothetical protein 629736 630197 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00619 product hypothetical protein 630184 631485 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00620 product hypothetical protein 631482 632903 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00621 product CDS 62kDa structural protein:936695 reverse MW:50777 632878 633963 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00622 product CDS Phage putative head morphogenesis protein, SPP1 gp7:935326 reverse MW:38561 634045 634773 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00623 product CDS: hypothetical protein 933392:934159 reverse MW:27584 634786 635736 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00624 product hypothetical protein 635782 636210 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00625 product hypothetical protein 636214 636714 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00626 product hypothetical protein 636731 637099 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00627 product hypothetical protein 637096 637752 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00628 note CDS conserved hypothetical protein, internal deletion 930789:931115 reverse MW:11234 product hypothetical protein 637749 638159 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00629 product hypothetical protein 638175 638789 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00630 product CDS hypothetical protein:930361 reverse MW:22758 638857 639513 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00631 product hypothetical protein 639517 639900 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00632 product hypothetical protein 639963 640211 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00633 product hypothetical protein 640222 643707 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00634 product CDS Phage tail length tape-measure protein 1:924067 reverse MW:129694 643710 644048 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00635 product CDS Phage minor tail protein:4362602 reverse MW:12472 644058 644807 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00636 product CDS Phage minor tail protein:4362221 reverse MW:25861 644810 645574 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00637 product CDS Phage tail assembly protein:4361520 reverse MW:29020 646207 645596 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00638 product hypothetical protein 646217 646381 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00639 product hypothetical protein 646362 647285 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00640 product CDS Phage antirepressor protein:926806 reverse MW:34657 647282 647857 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00641 product CDS: hypothetical protein 925287:925856 reverse MW:21230 647805 648308 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00642 product CDS: hypothetical protein 924836:925294 reverse MW:17299 648522 648914 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00643 product hypothetical protein 648522 648608 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 648986 649579 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00644 product CDS Phage tail assembly protein I:4360741 reverse MW:20385 649637 653443 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00645 product CDS Phage tail fiber protein:4359949 reverse MW:132544 653440 653808 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00646 product hypothetical protein 653805 654467 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00647 product CDS: hypothetical protein 4355260:4355946 reverse MW:25316 654495 655928 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00648 product CDS tail fiber domain protein:914428 reverse MW:49649 655993 656526 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00649 product CDS: Lytic enzyme 912397:912930 reverse MW:19153 656523 656936 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00650 product hypothetical protein 656924 657454 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00651 product CDS: hypothetical protein 911469:911999 reverse MW:18243 657790 657443 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00652 product CDS hypothetical protein:911480 forward MW:13444 658098 658009 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00653 product tRNA-Ser(gga) 659024 658275 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00654 product CDS Oxidoreductase, short chain dehydrogenase/reductase family:910648 forward MW:25938 659136 659702 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00655 product CDS Amidases related to nicotinamidase:909787 reverse MW:20719 662466 659710 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00656 product CDS: Superfamily II DNA/RNA helicases, SNF2 family 906457:909213 forward MW:104515 663065 662541 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00657 product CDS: hypothetical protein 905858:906382 forward MW:19238 663065 663003 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 666529 663077 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00658 product CDS Transcription-repair coupling factor:905846 forward MW:128822 666719 668182 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00659 product CDS NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase:902189 reverse MW:52701 668342 669604 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00660 product CDS Permeases of the major facilitator superfamily:900581 reverse MW:45428 670981 669683 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00661 product CDS Permeases of the major facilitator superfamily:899240 forward MW:46146 671369 672400 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00662 product CDS Thiamin biosynthesis lipoprotein ApbE:897545 reverse MW:37256 672543 673937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00663 product CDS Soluble pyridine nucleotide transhydrogenase:896380 reverse MW:50756 674702 673980 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00664 product CDS Glycerophosphoryl diester phosphodiesterase:894943 forward MW:26807 675348 674761 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00665 product CDS: hypothetical protein 893575:894162 forward MW:21639 675451 676701 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00666 product CDS Lipoprotein releasing system transmembrane protein LolC:893472 reverse MW:45579 676694 677392 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00667 product CDS Lipoprotein releasing system ATP-binding protein LolD:892229 reverse MW:25058 677467 678711 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00668 product CDS Lipoprotein releasing system transmembrane protein LolE:891456 reverse MW:44500 678821 679651 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00669 product CDS NADPH dependent preQ0 reductase:890102 reverse MW:30735 680257 679988 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00670 product CDS Chromosome segregation ATPases:888935 forward MW:10141 680967 680359 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00671 product CDS Phosphonoacetaldehyde phosphonohydrolase-related protein:888564 forward MW:21553 680967 680875 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 681167 681868 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00672 product CDS VacJ-like lipoprotein precursor:887756 reverse MW:25521 681167 681259 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 682254 681955 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00673 product CDS: hypothetical protein 886717:886968 forward MW:8775 682523 683707 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00674 product CDS Serine phosphatase RsbU, regulator of sigma subunit:886400 reverse MW:43223 683704 684189 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00675 product CDS Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor):885219 reverse MW:17898 685193 684264 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00676 product CDS Transaldolase:884659 forward MW:33620 685482 686729 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00677 product CDS Glutamate carboxypeptidase:883441 reverse MW:43866 685482 685553 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 686839 687282 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00678 product CDS Error-prone repair protein UmuD:881913 reverse MW:9925 687358 687609 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00679 product CDS: hypothetical protein 881314:881565 reverse MW:9117 687691 688818 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00680 product CDS Signal transduction histidine kinase:881232 reverse MW:40675 689027 689122 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00681 product hypothetical protein 689451 689708 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00682 product CDS: hypothetical protein 879215:879472 reverse MW:9463 690540 692306 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00683 product CDS hypothetical protein:878383 reverse MW:65889 692303 694000 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00684 product CDS: hypothetical protein 874923:876620 reverse MW:63415 694485 694207 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00685 product hypothetical protein 695670 694861 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00686 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 696689 695667 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00687 product CDS ISPsy4, transposase:6120546 reverse MW:37529 697239 696733 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00688 product CDS ISPsy5, transposase:798016 reverse MW:14933 697534 697244 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00689 product CDS ISPsy5, Orf1:4298523 forward MW:11384 697885 697616 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00690 product CDS C-5 cytosine-specific DNA methylase:4298151 forward MW:10375 698137 698781 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00691 product CDS: hypothetical protein 4154071:4154325 reverse MW:9905 699671 699177 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00692 product CDS Uncharacterized protein ImpD:5417341 forward MW:17724 699987 700115 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00693 product hypothetical protein 701262 700102 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00694 product CDS Site-specific recombinase, phage integrase family:4295665 forward MW:49853 701430 702368 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00695 product CDS tRNA dihydrouridine synthase A:4294337 reverse MW:34432 702483 702914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00696 product CDS Universal stress protein UspA-binding proteins:4293284 reverse MW:15106 703405 702941 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00697 product CDS Two-component system regulatory protein:4292826 forward MW:17651 705729 703402 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00698 product CDS Sensory box histidine kinase/response regulator:4292365 forward MW:86014 706394 705726 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00699 product CDS DNA-binding response regulator, LuxR family:4290041 forward MW:23517 707575 706391 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00700 product CDS Sensor protein DegS:4289376 forward MW:43008 707799 708323 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00701 product CDS: hypothetical protein 4287444:4287968 reverse MW:19301 707799 707864 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 708934 708398 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00702 product CDS Sigma factor PvdS, controling pyoverdin biosynthesis:4287369 forward MW:19989 709251 710009 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00703 product CDS Thioesterase PvdG involved in non-ribosomal peptide biosynthesis:4286516 reverse MW:28390 710114 723124 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00704 product CDS Pyoverdine chromophore precursor synthetase PvdL:4285653 reverse MW:480381 723288 724700 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00705 product CDS Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase:4272479 reverse MW:50543 724782 725009 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00706 product CDS Hypothetical MbtH-like protein, 4270758:4270985 reverse MW:8865 726058 725129 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00707 product CDS ABC transporter in pyoverdin gene cluster, periplasmic component:4270638 forward MW:32305 726058 725987 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 726958 726059 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00708 product CDS ABC transporter in pyoverdin gene cluster, permease component:4269708 forward MW:30828 727710 726958 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00709 product CDS ABC transporter in pyoverdin gene cluster, ATP-binding component:4268809 forward MW:27193 728639 727707 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00710 product CDS Cation ABC transporter, periplasmic cation-binding protein, 4267107:4268060 forward MW:34716 728639 728550 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 729247 728675 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00711 product CDS Hypothetical protein in pyoverdin gene cluster, 4266520:4267092 forward MW:20548 729576 729244 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00712 product CDS Hypothetical protein in pyoverdin gene cluster, 4266191:4266523 forward MW:11593 729576 729496 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 730115 729573 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00713 product CDS Putative thiamine pyrophosphate-requiring enzyme, 4265652:4266194 forward MW:19880 731365 730112 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00714 product CDS Putative iron-regulated membrane protein, 4264402:4265655 forward MW:46988 731640 732617 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00715 product CDS SyrP-like protein:4264127 reverse MW:36734 732807 736217 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00716 product CDS Non-ribosomal peptide synthetase modules, pyoverdine:4262960 reverse MW:125457 736214 744091 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00717 product CDS Pyoverdine sidechain non-ribosomal peptide synthetase PvdI:4259553 reverse MW:290046 744106 750567 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00718 product CDS Pyoverdine sidechain non-ribosomal peptide synthetase PvdJ:4251661 reverse MW:239531 750569 759196 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00719 product CDS Pyoverdine sidechain non-ribosomal peptide synthetase PvdD:4245198 reverse MW:316757 761733 759322 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00720 product CDS Outer membrane ferripyoverdine receptor FpvA, TonB-dependent:4236445 forward MW:87846 764290 762059 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00721 product CDS Outer membrane ferripyoverdine receptor FpvA, TonB-dependent:4233708 forward MW:81108 764290 764207 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 766262 764598 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00722 product CDS PvdE, pyoverdine ABC export system, fused ATPase and permease components:4231169 forward MW:61603 767206 766328 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00723 product CDS PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV):4229439 forward MW:31774 767206 767138 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 768538 767255 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00724 product CDS Pyoverdin biosynthesis protein PvdN, putative aminotransferase, class V:4228512 forward MW:47848 768538 768455 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 769924 768581 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00725 product CDS Putative dipeptidase, pyoverdin biosynthesis PvdM:4227186 forward MW:49286 770129 771739 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00726 product CDS Pyoverdine biosynthesis related protein PvdP:4225638 reverse MW:61537 773356 771968 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00727 product CDS Outer membrane pyoverdine eflux protein:4223799 forward MW:50464 773356 773291 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 775334 773364 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00728 product CDS Pyoverdine efflux carrier and ATP binding protein:4222403 forward MW:69559 776507 775335 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00729 product CDS pyoverdine-specific efflux macA-like protein:4220432 forward MW:41744 776711 779032 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00730 product CDS Acyl-homoserine lactone acylase PvdQ , quorum-quenching:4219062 reverse MW:84634 776711 776782 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 779403 779086 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00731 product CDS: hypothetical protein 4216364:4216681 forward MW:11450 780772 779576 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00732 product CDS Aromatic-amino-acid aminotransferase:4216191 forward MW:43262 781151 783166 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00733 product CDS Excinuclease ABC subunit B:4214616 reverse MW:76242 783720 785201 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00734 product CDS Glutamyl-tRNA synthetase @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24):4212047 reverse MW:56537 785351 785426 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00735 product tRNA-Ala(ggc) 785516 785591 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00736 product tRNA-Glu(ttc) 785644 785719 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00737 product tRNA-Ala(ggc) 785764 785839 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00738 product tRNA-Glu(ttc) 786596 787057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00739 product CDS: hypothetical protein 1810957:1811418 reverse MW:17482 787086 788039 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00740 product CDS tRNA-dihydrouridine synthase C:1810907 reverse MW:34396 788170 788613 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00741 product CDS 16 kDa heat shock protein A:1809844 reverse MW:16589 790861 788669 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00742 product CDS Sensory box protein:1809345 forward MW:81840 791802 790930 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00743 product CDS Cys regulon transcriptional activator CysB:1807084 forward MW:31959 791948 793375 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00744 product CDS 3-isopropylmalate dehydratase large subunit:1806066 reverse MW:51075 793372 794013 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00745 product CDS 3-isopropylmalate dehydratase small subunit:1804642 reverse MW:23999 794160 795242 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00746 product CDS 3-isopropylmalate dehydrogenase:1803854 reverse MW:38754 795313 796425 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00747 product CDS Aspartate-semialdehyde dehydrogenase:1802701 reverse MW:40400 796591 797595 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00748 product CDS 2-dehydro-3-deoxygalactonokinase:1801423 reverse MW:35744 797597 798232 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00749 product CDS 2-dehydro-3-deoxyphosphogalactonate aldolase:1800417 reverse MW:21913 798293 799441 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00750 product CDS Galactonate dehydratase:1799721 reverse MW:42266 799663 800973 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00751 product CDS D-galactonate transporter:1798336 reverse MW:47004 801055 801864 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00752 product CDS D-galactonate regulator, IclR family:1796959 reverse MW:29511 802928 801876 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00753 product CDS Alcohol dehydrogenase:1796138 forward MW:35837 803110 804003 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00754 product CDS Transcriptional regulator, AraC family:1794904 reverse MW:32552 805726 804071 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00755 product CDS Electron transfer flavoprotein-ubiquinone oxidoreductase:1793943 forward MW:60374 806250 806999 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00756 product CDS Electron transfer flavoprotein, beta subunit:1791764 reverse MW:26408 807315 807215 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_00757 product tRNA-Ser(gga) 808050 808877 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00758 product CDS Extracellular solute-binding protein, family 3:1789964 reverse MW:29889 808050 808121 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 808888 809241 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00759 product CDS lipoprotein, putative:1789126 reverse MW:12902 809238 810053 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00760 product CDS OmpA family protein:1788776 reverse MW:29980 809238 809309 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 810271 811710 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00761 product CDS Transcriptional regulator, GntR family domain / Aspartate aminotransferase:1787743 reverse MW:53416 811826 812473 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00762 product CDS Translation initiation factor 2 (IF-2; GTPase):1786116 reverse MW:20611 812568 812825 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00763 product CDS proteinase inhibitor:1785317 reverse MW:4522 812883 813488 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00764 product CDS Collagenase:1785131 reverse MW:22213 812883 812954 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 814847 813558 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00765 product CDS Citrate synthase (si):1784456 forward MW:47575 815328 815585 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00766 product CDS Succinate dehydrogenase cytochrome b-556 subunit:1782686 reverse MW:9083 815579 815947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00767 product CDS Succinate dehydrogenase hydrophobic membrane anchor protein:1782435 reverse MW:13658 815951 817723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00768 product CDS Succinate dehydrogenase flavoprotein subunit:1782063 reverse MW:63451 817736 818440 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00769 product CDS Succinate dehydrogenase iron-sulfur protein:1780278 reverse MW:26135 818479 818696 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_00770 product sucA-II 818700 821531 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00771 product CDS 2-oxoglutarate dehydrogenase E1 component:1779314 reverse MW:106528 821573 822793 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00772 product CDS Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex:1776441 reverse MW:42566 822966 824402 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00773 product CDS Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase:1775048 reverse MW:50043 824541 824609 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_00774 product sucC 824611 825777 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00775 product CDS Succinyl-CoA ligase [ADP-forming] beta chain:1773403 reverse MW:41212 825777 826658 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00776 product CDS Succinyl-CoA ligase [ADP-forming] alpha chain:1772237 reverse MW:30092 827324 826749 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00777 product CDS Acetyltransferases, including N-acetylases of ribosomal proteins:1771265 forward MW:22220 827626 828939 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00778 product CDS Branched-chain amino acid transport system carrier protein:1770388 reverse MW:44996 829297 829037 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00779 product CDS Lipoprotein, putative:1768977 forward MW:9108 829297 829241 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 829611 831518 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00780 product CDS Chaperone protein HtpG:1768403 reverse MW:71475 831609 832337 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00781 product CDS dienelactone hydrolase family protein:1766405 reverse MW:25983 833748 832525 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00782 product CDS 3-oxoacyl-[acyl-carrier-protein] synthase, KASI:1765489 forward MW:43221 834274 833759 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00783 product CDS 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase:1764255 forward MW:18811 836420 834495 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00784 product CDS Sensor histidine kinase/response regulator:1763519 forward MW:71040 836741 837766 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00785 product CDS Glycerol-3-phosphate dehydrogenase [NAD(P)+]:1761273 reverse MW:36666 837806 838150 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00786 product CDS: hypothetical protein 1759864:1760208 reverse MW:12743 838147 838602 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00787 product CDS Phosphohistidine phosphatase SixA:1759867 reverse MW:16238 838670 839113 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00788 product CDS: 4-hydroxybenzoyl-CoA thioesterase domain protein 1758901:1759344 reverse MW:15995 839233 840042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00789 product CDS: hypothetical protein 1757972:1758781 reverse MW:30408 840039 840893 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00790 product CDS hydrolase, alpha/beta fold family:1757975 reverse MW:30623 841033 841863 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00791 product CDS Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit:1756981 reverse MW:30115 841033 841113 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 841955 843004 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00792 product CDS Putative membrane protein:1756059 reverse MW:38003 844239 843205 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00793 product CDS Sensor histidine kinase:1754809 forward MW:38484 845039 844236 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00794 product CDS DNA-binding response regulator GltR, controls specific porins for the entry of glucose:1753778 forward MW:30363 845361 847364 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00795 product CDS: hypothetical protein 1750650:1752770 reverse MW:77158 848572 847469 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00796 product CDS ISPsy19, transposase:6133168 forward MW:41651 849756 848779 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00797 product CDS IS1479 transposase 6015788:6016804 forward MW:38512 850056 852377 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00798 product CDS Outer membrane autotransporter barrel:1750353 reverse MW:79927 850056 850157 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 34 product putative signal peptide 852513 854060 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00799 note CDS Conserved domain protein 1746349:1747896 reverse MW:57119 product hypothetical protein 855210 854098 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00800 product CDS fimbrial protein, putative:1746311 forward MW:38804 855210 855133 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 857770 855257 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00801 product CDS Outer membrane usher protein FIMD:1745152 forward MW:90954 858565 857810 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00802 product CDS P pilus assembly protein, chaperone PapD:1742599 forward MW:27054 859284 858673 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00803 product CDS Type-1 fimbrial protein, A chain precursor:1741736 forward MW:18175 859284 859156 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 43 product putative signal peptide 864701 859653 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00804 product CDS YD repeat protein:1740756 forward MW:186132 864984 866807 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00805 product CDS: hypothetical protein 1733602:1735425 reverse MW:66949 866927 869383 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00806 product CDS: hypothetical protein 1731557:1733482 reverse MW:70540 869438 871711 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00807 product CDS: hypothetical protein 1728699:1730972 reverse MW:82688 871750 874740 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00808 product CDS Imidazoleglycerol-phosphate synthase:1728660 reverse MW:108869 874737 875222 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00809 product CDS lipoprotein, putative:1725673 reverse MW:17447 874737 874832 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 875313 880043 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00810 product CDS YD repeat protein:1725097 reverse MW:175866 880378 880115 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00811 product CDS Transcriptional activator protein lasR:1720295 forward MW:9574 880622 880717 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00812 product hypothetical protein 880720 882414 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00813 product CDS Potassium-transporting ATPase A chain (TC 3.A.3.7.1):1719690 reverse MW:60010 882425 884503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00814 product CDS Potassium-transporting ATPase B chain (TC 3.A.3.7.1):1717985 reverse MW:73071 884516 885130 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00815 product CDS Potassium-transporting ATPase C chain (TC 3.A.3.7.1):1715894 reverse MW:21062 885197 887860 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00816 product CDS Osmosensitive K+ channel histidine kinase KdpD:1715213 reverse MW:96770 887857 888549 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00817 product CDS DNA-binding response regulator KdpE:1712553 reverse MW:25418 888656 888934 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00818 product CDS lipoprotein, putative:1711754 reverse MW:10000 888656 888712 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 889131 890048 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00819 product CDS: MoxR-like ATPases 1710362:1711279 reverse MW:33052 890045 891001 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00820 product CDS: hypothetical protein 1709409:1710365 reverse MW:35511 890998 893022 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00821 product CDS: Transglutaminase-like enzymes, putative cysteine proteases 1707388:1709412 reverse MW:75727 893047 893808 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00822 product CDS: hypothetical protein 1706602:1707363 reverse MW:28355 893966 894763 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00823 product CDS TesB-like acyl-CoA thioesterase 1:1706444 reverse MW:28692 895018 894773 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00824 note CDS Conserved domain protein 1705392:1705637 forward MW:8853 product hypothetical protein 896613 895138 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00825 product CDS Methyl-accepting chemotaxis protein:1705272 forward MW:52539 897534 896698 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00826 product CDS Deoxyribonuclease TatD:1703712 forward MW:31098 897726 899147 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00827 product CDS Transglycosylase, Slt family:1702684 reverse MW:52652 897726 897794 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 899254 899688 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00828 product CDS Membrane protein, distant similarity to thiosulphate:quinone oxidoreductase DoxD:1701156 reverse MW:14990 899947 900255 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00829 product CDS: hypothetical protein 1700155:1700463 reverse MW:11520 900560 902851 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00830 product CDS Sigma-54 dependent response regulator:1699850 reverse MW:83550 902873 904102 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00831 product CDS Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization:1697537 reverse MW:42336 904099 904815 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00832 product CDS Hydantoin racemase:1696311 reverse MW:25446 904925 905119 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00833 product hypothetical protein 905392 906369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00834 product CDS IS1479 transposase 6015788:6016804 forward MW:38512 907038 906496 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00835 product CDS: hypothetical protein 1694586:1695527 forward MW:32983 907653 907237 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00836 product hypothetical protein 907980 908309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00837 product CDS Valyl-tRNA synthetase:1693614 reverse MW:11244 907980 908048 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 908356 908829 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00838 product CDS Transcription elongation factor GreB:1693268 reverse MW:18528 911621 909105 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00839 product CDS ABC transporter, permease protein, putative:1692519 forward MW:89445 912304 911621 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00840 product CDS ABC transporter ATP-binding protein YvcR:1690003 forward MW:24808 912315 912920 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00841 product CDS Arylesterase precursor:1689309 reverse MW:21170 912315 912380 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 912977 913258 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00842 product CDS: hypothetical protein 1688366:1688647 reverse MW:10730 913454 914332 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00843 product CDS ErfK/YbiS/YcfS/YnhG family protein:1688257 reverse MW:34461 914903 914652 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00844 product CDS Major outer membrane lipoprotein I:1686972 forward MW:8812 914903 914826 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 915086 914941 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_00845 product P14 915376 915663 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00846 note CDS Conserved domain protein 1685961:1686248 reverse MW:10749 product hypothetical protein 916826 915750 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00847 product CDS 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha:1685874 forward MW:40194 917070 918041 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00848 product CDS 2-dehydropantoate 2-reductase:1684554 reverse MW:34419 918045 918965 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00849 product CDS 5'-nucleotidase:1683579 reverse MW:33382 919044 919547 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00850 product CDS universal stress protein family:1682580 reverse MW:18124 919713 920687 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00851 product CDS transcriptional regulator CysB:1681911 reverse MW:36290 921559 920825 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00852 product CDS Phosphoadenylyl-sulfate reductase [thioredoxin] / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)1680058:1680792 forward MW:28000 921700 922317 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00853 product CDS Homoserine kinase:1679917 reverse MW:23586 923810 922467 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00854 product CDS Para-aminobenzoate synthase, aminase component:1679150 forward MW:45686 924880 923900 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00855 product CDS: Alpha-L-glutamate ligase family protein 1676737:1677717 forward MW:35980 926418 924877 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00856 product CDS: hypothetical protein 1675199:1676740 forward MW:57301 926974 926423 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00857 product CDS: hypothetical protein 1674643:1675194 forward MW:20228 926974 926894 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 927274 927993 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00858 product CDS Propionate catabolism operon transcriptional regulator of GntR family [predicted]:1674343 reverse MW:27169 927990 928883 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00859 product CDS Methylisocitrate lyase:1673627 reverse MW:31950 928938 929057 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00860 product hypothetical protein 929258 930385 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00861 product CDS 2-methylcitrate synthase:1672359 reverse MW:41499 930460 933051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00862 product CDS 2-methylcitrate dehydratase FeS dependent:1671157 reverse MW:93997 933172 934362 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00863 product CDS PrpF protein involved in 2-methylcitrate cycle:1668445 reverse MW:41129 935186 934368 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00864 product CDS: hypothetical protein 1666431:1667249 forward MW:31017 935380 937755 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00865 product CDS Phosphoenolpyruvate synthase:1666153 reverse MW:83058 937949 938941 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00866 product CDS Esterase/lipase/thioesterase family protein:1663668 reverse MW:36535 939030 939518 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00867 product CDS Ribonuclease E inhibitor RraA:1662587 reverse MW:17481 939530 940525 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00868 product CDS CmaX protein:1662087 reverse MW:37795 940611 940859 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00869 product CDS crfX protein:1661006 reverse MW:8787 940862 941686 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00870 product CDS CmpX:1660755 reverse MW:28972 941790 942359 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00871 product CDS DNA-directed RNA polymerase specialized sigma subunit, sigma24-like:1659644 reverse MW:15207 942466 943500 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00872 product CDS Major porin and structural outer membrane porin OprF:1659151 reverse MW:36521 942466 942540 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 944349 943588 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00873 product CDS Uroporphyrinogen-III methyltransferase:1658029 forward MW:26953 947080 944360 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00874 product CDS Assimilatory nitrate reductase large subunit:1657257 forward MW:99143 948306 947077 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00875 note CDS Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4), N-terminal domain 1653311:1654540 forward MW:44271 product hypothetical protein 948498 948361 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_00876 product P11 950249 948588 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00877 product CDS Serine/threonine protein kinase:1653029 forward MW:61844 951468 950257 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00878 product CDS Nitrate/nitrite transporter:1651360 forward MW:42619 952443 953690 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00879 product CDS Levansucrase:1649174 reverse MW:45869 954323 953748 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00880 product CDS Response regulator NasT:1647869 forward MW:21559 955549 954338 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00881 product CDS Nitrate ABC transporter, nitrate-binding protein:1647279 forward MW:43942 955794 956825 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00882 product CDS Dihydroorotate dehydrogenase:1645823 reverse MW:36159 957186 956971 CDS gene rmf inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P0AFW2 locus_tag NYT1canu_00883 product Ribosome modulation factor 957335 957205 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_00884 product rmf 957808 960060 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00885 product CDS 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-):1643809 reverse MW:84624 960234 962594 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00886 product CDS CHASE domain/PAS domain protein:1641383 reverse MW:87462 964104 962638 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00887 product CDS D-alanyl-D-alanine carboxypeptidase:1638979 forward MW:53047 964104 964033 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 964431 964775 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00888 product CDS: uncharacterized protein YggL 1636842:1637186 reverse MW:12814 965445 964882 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00889 product CDS Hybrid sensory histidine kinase in two-component regulatory system with EvgA:1636735 forward MW:20901 966642 965539 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00890 product CDS site-specific recombinase, phage integrase family:1636078 forward MW:40947 966865 966623 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00891 product CDS hypothetical protein:1634994 forward MW:4802 967108 966902 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00892 product CDS hypothetical protein:1634715 forward MW:7631 967233 967445 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00893 product CDS: hypothetical protein 1634172:1634384 reverse MW:8091 968086 967448 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00894 product CDS Phage-related protein:1634169 forward MW:10158 968397 968083 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00895 product CDS: hypothetical protein 1633199:1633534 forward MW:12805 969700 968786 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00896 product CDS hypothetical protein:1632831 forward MW:33912 970284 969697 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00897 product CDS: hypothetical protein 1631333:1631920 forward MW:23296 970284 970225 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 972054 970300 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00898 product CDS DNA-cytosine methyltransferase:1631317 forward MW:61227 972140 972658 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00899 product hypothetical protein 973498 972731 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00900 product CDS hypothetical protein:1628886 forward MW:29320 973794 974771 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00901 product CDS IS1479 transposase 6015788:6016804 forward MW:38512 975052 975249 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00902 product hypothetical protein 976184 975372 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00903 product CDS: hypothetical protein 1626647:1627459 forward MW:29184 976558 976211 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00904 product CDS Translation elongation factors (GTPases):1626620 forward MW:12377 977249 976647 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00905 product CDS hypothetical protein:1626184 forward MW:22469 977587 977249 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00906 product CDS hypothetical protein:1625582 forward MW:12397 978406 977885 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00907 product CDS hypothetical protein:1624946 forward MW:19034 978872 978471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00908 product CDS Transcriptional regulator, LuxR family:1624360 forward MW:14693 979554 979195 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00909 product CDS hypothetical protein:1623636 forward MW:5103 980477 979668 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00910 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 981496 980474 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00911 product CDS ISPsy4, transposase:6120546 reverse MW:37529 982429 981731 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00912 product hypothetical protein 982533 982766 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00913 product CDS hypothetical protein:4383541 reverse MW:8799 983183 982950 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00914 product CDS hypothetical protein:4383124 forward MW:8450 983386 984165 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00915 product CDS hypothetical protein:4382238 reverse MW:12284 984162 984842 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00916 product CDS hypothetical protein:4381651 reverse MW:15196 984839 985135 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00917 product CDS hypothetical protein:4381118 reverse MW:6578 985132 985563 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00918 product CDS: hypothetical protein 4380511:4380942 reverse MW:16018 985560 985871 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00919 product CDS: hypothetical protein 4380203:4380514 reverse MW:11228 985868 987145 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00920 product CDS phage integrase, putative:4380206 reverse MW:47588 987148 987360 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00921 product CDS hypothetical protein:4378926 reverse MW:8184 987444 987686 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00922 product CDS hypothetical protein:4378630 reverse MW:8557 987689 987880 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00923 product CDS hypothetical protein:4378385 reverse MW:7027 987883 988266 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00924 product CDS antitermination protein Q, putative:4378191 reverse MW:14146 988562 988876 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00925 product CDS phage holin, lambda family:4377512 reverse MW:11419 988873 989259 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00926 note CDS Conserved domain protein 4376815:4377201 reverse MW:13757 product hypothetical protein 989460 989561 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00927 product hypothetical protein 989665 990015 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00928 product CDS hypothetical protein:4376337 reverse MW:9489 990066 990275 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00929 product CDS hypothetical protein:4376008 reverse MW:7730 990275 990610 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00930 product CDS: hypothetical protein 4375464:4375799 reverse MW:12573 990831 991313 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00931 product CDS hypothetical protein:4375103 reverse MW:11977 991310 992998 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00932 product CDS Phage terminase large subunit:4374765 reverse MW:61315 993001 994215 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00933 product CDS Phage portal protein:4373074 reverse MW:44952 994199 994843 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00934 product CDS Phage prohead protease, HK97 family:4371876 reverse MW:23421 994840 996042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00935 product CDS Phage major capsid protein:4371235 reverse MW:44542 996098 996298 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00936 product CDS: hypothetical protein 4369777:4369962 reverse MW:6594 996299 996592 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00937 product CDS: hypothetical protein 4369483:4369776 reverse MW:10998 996592 996930 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00938 product CDS Phage related protein:4369483 reverse MW:12035 996923 997396 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00939 product CDS: hypothetical protein 4368679:4369119 reverse MW:15881 997396 997761 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00940 product CDS: hypothetical protein 4368314:4368679 reverse MW:13041 997828 998331 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00941 product CDS Major tail subunit:4368247 reverse MW:18014 998341 998676 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00942 product CDS: hypothetical protein 4367399:4367734 reverse MW:12162 998694 998960 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00943 product CDS: hypothetical protein 4367115:4367381 reverse MW:9665 998996 999310 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00944 product hypothetical protein 998996 999061 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 999370 1003473 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00945 product CDS Phage tail length tape-measure protein 1:4366705 reverse MW:143675 1003473 1003817 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00946 product CDS Phage minor tail protein:4362602 reverse MW:12472 1003854 1004552 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00947 product CDS Phage minor tail protein:4362221 reverse MW:25861 1004555 1005337 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00948 product CDS Phage tail assembly protein:4361520 reverse MW:29020 1005334 1005921 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00949 product CDS Phage tail assembly protein I:4360741 reverse MW:20385 1005976 1009812 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00950 product CDS Phage tail fiber protein:4359949 reverse MW:132544 1009809 1010129 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00951 product hypothetical protein 1010129 1010815 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00952 product CDS: hypothetical protein 4355260:4355946 reverse MW:25316 1010841 1012118 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00953 product CDS tail fiber domain protein:4355234 reverse MW:44489 1012183 1012728 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00954 product CDS: Lytic enzyme 4353347:4353892 reverse MW:19623 1013419 1012658 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_00955 product hypothetical protein 1016672 1013532 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00956 product CDS Hybrid sensory histidine kinase in two-component regulatory system with EvgA:4352543 forward MW:116103 1017355 1016729 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00957 product CDS DNA-binding response regulator, LuxR family:4349346 forward MW:21185 1018151 1017759 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00958 product CDS response regulator:4348316 forward MW:14139 1019734 1018403 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00959 product CDS Deoxyguanosinetriphosphate triphosphohydrolase:4347672 forward MW:49618 1020257 1019901 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00960 product CDS: hypothetical protein 4345818:4346174 forward MW:13761 1020646 1020254 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00961 product CDS Probable transmembrane protein:4345821 forward MW:11320 1020965 1020651 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00962 product CDS Probable transmembrane protein:4345424 forward MW:11362 1021219 1022289 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00963 product CDS Exopolysaccharide production protein ExoZ:4344856 reverse MW:39896 1022362 1022610 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00964 product CDS Thiol-disulfide isomerase and thioredoxins:4343713 reverse MW:9394 1022649 1023578 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00965 product CDS Pca operon transcriptional activator PcaQ:4343426 reverse MW:33633 1023706 1024425 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00966 product CDS Protocatechuate 3,4-dioxygenase beta chain:4342369 reverse MW:26764 1024437 1025039 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00967 product CDS Protocatechuate 3,4-dioxygenase alpha chain:4341638 reverse MW:22494 1025107 1026456 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00968 product CDS 4-hydroxybenzoate transporter:4340968 reverse MW:47168 1026481 1027842 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00969 product CDS 3-carboxy-cis,cis-muconate cycloisomerase:4339594 reverse MW:49240 1027839 1028237 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00970 product CDS 4-carboxymuconolactone decarboxylase:4338236 reverse MW:15022 1029986 1028730 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00971 product CDS PhaK-like protein:4337345 forward MW:45915 1029986 1029900 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 1030209 1031096 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00972 product CDS membrane protein, putative:4335866 reverse MW:31747 1032523 1031204 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00973 product CDS Major facilitator family transporter:4334871 forward MW:48200 1033141 1035048 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00974 product CDS 4-hydroxyphenylpyruvate dioxygenase:4332934 reverse MW:70285 1035153 1035866 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00975 product CDS Transcriptional regulator, TetR family:4330922 reverse MW:25517 1036724 1035870 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00976 product CDS Quinate/shikimate 5-dehydrogenase I delta:4330247 forward MW:30348 1036911 1037801 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00977 product CDS Similar to ribosomal large subunit pseudouridine synthase A:4329206 reverse MW:33881 1038102 1037878 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00978 product CDS lipoprotein, putative:4328239 forward MW:8202 1038102 1038040 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 1038803 1038198 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00979 product CDS Molybdopterin-guanine dinucleotide biosynthesis protein MobA:4327919 forward MW:20160 1038879 1039418 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00980 product CDS Molybdenum cofactor biosynthesis protein MoaB:4327238 reverse MW:19306 1039425 1040636 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00981 product CDS Molybdopterin biosynthesis protein MoeA:4326692 reverse MW:43455 1040726 1041652 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00982 product CDS O antigen biosynthesis rhamnosyltransferase rfbN:4325391 reverse MW:34883 1043508 1041700 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00983 product CDS Glutathione-regulated potassium-efflux system protein KefB:4324417 forward MW:64946 1043753 1043941 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00984 product CDS: hypothetical protein 4322176:4322364 reverse MW:6910 1044360 1043971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00985 product CDS Fe2+/Zn2+ uptake regulation proteins:4322146 forward MW:14497 1045591 1044563 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00986 product CDS Sigma factor regulatory protein, FecR/PupR family:4321554 forward MW:37358 1045821 1046852 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00987 product CDS Delta 1-piperideine-2-carboxylate reductase / Delta 1-pyrroline-2-carboxylate reductase (EC 1.5.1.1)4319265:4320296 reverse MW:36249 1046954 1047151 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00988 product CDS: hypothetical protein 4318966:4319163 reverse MW:7116 1047237 1047494 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00989 note CDS Conserved domain protein 4318623:4318880 reverse MW:9144 product hypothetical protein 1047491 1048282 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00990 product CDS Methionine aminopeptidase:4318626 reverse MW:28401 1048598 1048359 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00991 product CDS: hypothetical protein 4317519:4317758 forward MW:9018 1049505 1048804 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00992 product CDS Extracellular deoxyribonuclease Dns:4317313 forward MW:26727 1049505 1049434 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1049761 1049510 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00993 product CDS: hypothetical protein 4316356:4316607 forward MW:9341 1049898 1050122 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00994 product CDS lipoprotein, putative:4316219 reverse MW:8098 1049898 1049957 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 1050306 1051265 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00995 product CDS Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1):4315811 reverse MW:33847 1050306 1050395 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 1051319 1052872 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00996 product CDS Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1):4314798 reverse MW:56116 1052869 1053861 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00997 product CDS Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1):4313248 reverse MW:34315 1053863 1054879 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00998 product CDS Ribose operon repressor:4312254 reverse MW:36323 1054910 1055830 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_00999 product CDS Ribokinase:4311207 reverse MW:31157 1055827 1056231 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01000 product CDS Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1):4310290 reverse MW:14534 1056271 1057296 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01001 product CDS Inosine-uridine preferring nucleoside hydrolase:4309846 reverse MW:36778 1056271 1056354 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 1057514 1057320 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01002 product CDS: hypothetical protein 4308603:4308797 forward MW:6820 1057832 1058167 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01003 product CDS lipoprotein, putative:4308249 reverse MW:9999 1057832 1057906 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 1058577 1058189 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01004 product cspA 1058445 1058233 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01005 product CDS Cold shock protein CspG:4307884 forward MW:7684 1059056 1058751 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01006 product CDS: hypothetical protein 4307061:4307366 forward MW:10422 1059056 1058985 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1059419 1061341 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01007 product CDS Threonyl-tRNA synthetase:4306698 reverse MW:72498 1061359 1061892 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01008 product CDS Translation initiation factor 3:4304758 reverse MW:20035 1061953 1062147 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01009 product CDS LSU ribosomal protein L35p:4304164 reverse MW:7368 1062177 1062533 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01010 product CDS LSU ribosomal protein L20p:4303940 reverse MW:13314 1062637 1063653 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01011 product CDS Phenylalanyl-tRNA synthetase alpha chain:4303480 reverse MW:38180 1063682 1066060 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01012 product CDS Phenylalanyl-tRNA synthetase beta chain:4302435 reverse MW:86378 1066064 1066366 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01013 product CDS Integration host factor alpha subunit:4300053 reverse MW:11476 1066347 1066703 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01014 product CDS Transcriptional regulator, MerR family:4299770 reverse MW:13888 1066788 1066864 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_01015 product tRNA-Pro(ggg) 1067962 1067153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01016 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 1068981 1067959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01017 product CDS ISPsy4, transposase:6120546 reverse MW:37529 1071793 1069703 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01018 product CDS hypothetical protein:5110329 forward MW:77402 1072414 1072728 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01019 product hypothetical protein 1074005 1072755 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01020 product CDS putative transposase:5941457 reverse MW:46763 1075113 1074160 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01021 product CDS Putative transcriptional regulator of sorbose uptake and utilization genes:5107244 forward MW:34736 1075995 1075195 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01022 product CDS SHORT CHAIN DEHYDROGENASE:5106209 forward MW:28896 1076790 1076026 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01023 product CDS Short chain dehydrogenase:5105378 forward MW:26403 1078351 1076822 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01024 product CDS D-xylose transport ATP-binding protein XylG:5104582 forward MW:54883 1079299 1078367 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01025 product CDS Xylose ABC transporter, periplasmic xylose-binding protein XylF:5103037 forward MW:32144 1079299 1079219 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 1080370 1079366 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01026 product CDS Xylose ABC transporter, permease protein XylH:5102038 forward MW:34617 1080734 1081570 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01027 note CDS Transketolase, N-terminal section (EC 2.2.1.1) 5099834:5100820 reverse MW:35888 product hypothetical protein 1081560 1082492 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01028 note CDS Transketolase, C-terminal section (EC 2.2.1.1) 5098912:5099844 reverse MW:32631 product hypothetical protein 1082523 1083998 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01029 product CDS Unknown pentose kinase 5097406:5098899 reverse MW:52774 1084392 1084084 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01030 product CDS Transcriptional regulator, ArsR family:5097320 forward MW:11395 1084479 1085570 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01031 product CDS xenobiotic reductase A:5096925 reverse MW:39864 1085736 1086182 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01032 product CDS Rrf2 family transcriptional regulator, group III:5095668 reverse MW:15514 1086319 1086963 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01033 product CDS: hypothetical protein 5094441:5095085 reverse MW:22346 1087856 1086999 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01034 product CDS Urease accessory protein UreD:5094405 forward MW:30508 1088515 1087853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01035 product CDS Urease accessory protein UreG:5093551 forward MW:23870 1090255 1088543 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01036 product CDS Urease alpha subunit:5092861 forward MW:61199 1090954 1090259 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01037 product CDS Urease beta subunit / Urease gamma subunit (EC 3.5.1.5):5091145 forward MW:25001 1091701 1090970 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01038 product CDS Urease accessory protein UreF:5090434 forward MW:26353 1092138 1091698 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01039 product CDS Urease accessory protein UreE:5089706 forward MW:16290 1092850 1092161 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01040 product CDS Urea ABC transporter, ATPase protein UrtE:5089243 forward MW:25209 1093590 1092853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01041 product CDS Urea ABC transporter, ATPase protein UrtD:5088551 forward MW:27197 1094729 1093587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01042 product CDS Urea ABC transporter, permease protein UrtC:5087817 forward MW:41274 1095633 1094731 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01043 product CDS Urea ABC transporter, permease protein UrtB:5086673 forward MW:32843 1096881 1095700 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01044 product CDS Urea ABC transporter, urea binding protein:5085704 forward MW:42419 1096881 1096786 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 1097041 1096958 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01045 product livK 1097462 1097545 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01046 product livK 1097658 1098806 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01047 product CDS Urea ABC transporter, urea binding protein:5083746 reverse MW:42721 1098803 1099435 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01048 product CDS Two component response regulator:5082601 reverse MW:23387 1099488 1099569 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01049 product livK 1099522 1101192 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01050 product CDS Amidase clustered with urea ABC transporter and nitrile hydratase functions:5081882 reverse MW:58669 1103227 1101308 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01051 product CDS DNA recombination protein RmuC:5080096 forward MW:72029 1104332 1103358 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01052 product CDS ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family:5078046 forward MW:35117 1105368 1104409 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01053 product CDS D-isomer specific 2-hydroxyacid dehydrogenase family protein:5076995 forward MW:34134 1106735 1105365 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01054 product CDS Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-dependent oxidoreductases:5076039 forward MW:49678 1107794 1106907 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01055 product CDS Arginase:5074497 forward MW:32469 1108862 1107927 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01056 product CDS Transcriptional regulator, AraC family:5073477 forward MW:34873 1109486 1111618 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01057 product CDS FOG: PAS/PAC domain:5071918 reverse MW:80087 1111615 1113105 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01058 product CDS Positive regulator of CheA protein activity (CheW):5069789 reverse MW:53406 1113160 1113285 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01059 product CDS: hypothetical protein 5068119:5068244 reverse MW:4593 1113844 1113359 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01060 product CDS GCN5-related N-acetyltransferase:5068045 forward MW:17866 1114303 1113905 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01061 product CDS Ribosomal protein S3AE:5067499 forward MW:15059 1115112 1114357 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01062 product CDS Metallo-beta-lactamase superfamily protein 5066292:5067047 forward MW:26904 1115112 1115032 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 1115220 1116104 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01063 product CDS LysR-family transcriptional regulator clustered with 5065300:5066184 reverse MW:31866 1118205 1116265 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01064 product CDS Methyl-accepting chemotaxis protein:5065139 forward MW:69733 1118988 1118416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01065 product CDS Sarcosine oxidase gamma subunit:5062988 forward MW:20815 1121898 1118992 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01066 product CDS Sarcosine oxidase alpha subunit:5062412 forward MW:105986 1122200 1121895 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01067 product CDS Sarcosine oxidase delta subunit:5059509 forward MW:11657 1123455 1122214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01068 product CDS Sarcosine oxidase beta subunit:5059190 forward MW:45143 1124339 1123437 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01069 product CDS Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)5057065:5057967 forward MW:31616 1125202 1124336 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01070 product CDS Formyltetrahydrofolate deformylase:5057068 forward MW:32659 1126230 1125502 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01071 product CDS Additional periplasmic component NikK of nickel ECF transporter:5055902 forward MW:26123 1126230 1126159 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1128380 1126269 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01072 product CDS Ferrichrome-iron receptor:5055135 forward MW:77395 1128380 1128309 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1129895 1128594 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01073 product CDS Mn2+/Fe2+ transporter, NRAMP family:5052810 forward MW:47355 1130472 1131494 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01074 product hypothetical protein 1132167 1132916 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01075 product CDS hydrolase, carbon-nitrogen family:4779470 reverse MW:26780 1134176 1132923 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01076 product CDS Permeases of the major facilitator superfamily:4778702 forward MW:43206 1134465 1134283 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01077 product CDS: hypothetical protein 4777160:4777342 forward MW:6811 1134838 1134467 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01078 product CDS: hypothetical protein 4776787:4777158 forward MW:13761 1135023 1136114 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01079 product CDS Gluconolactonase:4776602 reverse MW:39826 1136224 1137057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01080 product CDS membrane protein, putative:4775401 reverse MW:29295 1137264 1139249 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01081 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):4774361 reverse MW:71615 1139266 1140186 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01082 product CDS Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1):4772359 reverse MW:33202 1139266 1139331 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 1141529 1140579 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01083 product CDS DNA/RNA non-specific endonuclease:4771046 forward MW:35574 1141681 1143477 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01084 product CDS Methyl-accepting chemotaxis protein:4769944 reverse MW:66016 1143592 1143897 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01085 product CDS Cation transport ATPase:4768033 reverse MW:11011 1144361 1143906 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01086 product CDS endoribonuclease L-PSP family protein:4767719 forward MW:17133 1146358 1144370 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01087 product CDS DNA topoisomerase III:4767255 forward MW:72231 1147362 1146535 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01088 product CDS: hypothetical protein 4764263:4765090 forward MW:29286 1147643 1148590 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01089 product CDS Methyl-accepting chemotaxis protein:4763982 reverse MW:33522 1148544 1149533 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01090 product CDS Methyl-accepting chemotaxis protein:4763051 reverse MW:33951 1149811 1150641 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01091 product CDS Ferric siderophore transport system, periplasmic binding protein TonB:4761814 reverse MW:29167 1150776 1151504 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01092 product CDS MotA/TolQ/ExbB proton channel family protein:4760849 reverse MW:25592 1151506 1151907 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01093 product CDS Biopolymer transport protein ExbD/TolR:4760119 reverse MW:14394 1152190 1154592 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01094 product CDS TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins:4759435 reverse MW:86504 1152190 1152282 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 1155788 1154751 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01095 product CDS ABC transporter, periplasmic substrate-binding protein, putative:4756874 forward MW:37713 1155788 1155675 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 38 product putative signal peptide 1156021 1156836 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01096 product CDS Ribulose-5-phosphate 4-epimerase and aldolases:4755604 reverse MW:29568 1156907 1157815 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01097 product CDS Glutaminase:4754718 reverse MW:32524 1157892 1158995 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01098 product CDS putative lipoprotein:4753706 reverse MW:39348 1157892 1157972 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 1159137 1160948 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01099 product CDS ABC transporter, ATP-binding/permease protein:4752488 reverse MW:67034 1161036 1162073 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01100 product CDS OXIDOREDUCTASE, ALDO/KETO REDUCTASE FAMILY:4750589 reverse MW:38761 1162157 1162957 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01101 product CDS Glucose 1-dehydrogenase:4749468 reverse MW:28244 1162950 1164776 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01102 product CDS Glucoamylase:4748675 reverse MW:69366 1165729 1164821 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01103 product CDS Transcriptional regulator:4746804 forward MW:33046 1165873 1166913 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01104 product CDS Hydrolase, alpha/beta fold family protein,/AT4G12830 , group3 4744712:4745752 reverse MW:38351 1167296 1167520 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01105 product CDS: hypothetical protein 4744105:4744329 reverse MW:8607 1168969 1167551 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01106 product CDS MFS sugar transporter:4744074 forward MW:52123 1169362 1170681 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01107 product CDS Manganese transport protein MntH:4742164 reverse MW:43171 1170743 1172194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01108 product CDS major facilitator family transporter:4740882 reverse MW:52222 1172399 1172199 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01109 product CDS: hypothetical protein 4739226:4739426 forward MW:7476 1172739 1172536 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01110 product CDS: hypothetical protein 4738886:4739089 forward MW:7239 1173291 1172803 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01111 product CDS: hypothetical protein 4738334:4738822 forward MW:17747 1173291 1173232 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 1173502 1174086 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01112 product CDS Transporter, LysE family:4738123 reverse MW:20995 1174929 1174096 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01113 product CDS Transcriptional regulator, AraC family:4737529 forward MW:31017 1175196 1175702 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01114 product CDS hypothetical protein:4736429 reverse MW:18589 1175876 1176589 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01115 product CDS hypothetical protein:4735164 reverse MW:4807 1177027 1176719 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01116 product CDS lipoprotein, putative:4734906 forward MW:13200 1177027 1176950 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 1177977 1177120 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01117 product CDS NADPH:quinone oxidoreductase 2 ## possible protective/detoxification role:4734505 forward MW:29858 1178065 1178493 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01118 product CDS Redox-sensing transcriptional regulator QorR:4733560 reverse MW:15759 1178632 1180521 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01119 product CDS Cell division protein FtsI [Peptidoglycan synthetase]:4732993 reverse MW:70270 1180686 1182404 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01120 product CDS Pyruvate oxidase [ubiquinone, cytochrome]:4730939 reverse MW:61294 1182664 1184625 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01121 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):4728961 reverse MW:70234 1185331 1185651 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01122 product CDS: hypothetical protein 4725974:4726294 reverse MW:12104 1185872 1186390 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01123 product CDS: Hypothetical periplasmic protein 4725235:4725870 reverse MW:23421 1185872 1185931 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 1186408 1186941 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01124 product CDS: Putative lipoprotein precursor 4724684:4725217 reverse MW:20060 1186408 1186467 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 1187966 1186968 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01125 product CDS Molybdenum cofactor biosynthesis protein MoaA:4724657 forward MW:37204 1189578 1188229 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01126 product CDS sodium/hydrogen exchanger family protein:4723396 forward MW:48079 1190743 1189691 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01127 product CDS Spermidine/putrescine-binding periplasmic protein:4721934 forward MW:38139 1190743 1190657 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 1191924 1190740 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01128 product CDS Sarcosine oxidase beta subunit:4720885 forward MW:41319 1193312 1191921 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01129 product CDS Opine oxidase subunit A:4719704 forward MW:49649 1193599 1193309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01130 product CDS: hypothetical protein 4718026:4718316 forward MW:10320 1194408 1193614 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01131 product CDS ABC-type spermidine/putrescine transport system, permease component II:4718011 forward MW:28724 1195284 1194412 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01132 product CDS ABC-type spermidine/putrescine transport system, permease component I:4717213 forward MW:31831 1196309 1195281 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01133 product CDS ABC-type spermidine/putrescine transport systems, ATPase components:4716344 forward MW:37531 1196551 1197390 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01134 product CDS Transcriptional regulator, IclR family:4715074 reverse MW:30221 1197594 1199213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01135 product CDS Methyl-accepting chemotaxis protein:4714091 reverse MW:60119 1200244 1199282 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01136 product CDS Methyltransferase:4712343 forward MW:36269 1201014 1200310 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01137 product CDS membrane protein, putative:4711315 forward MW:24926 1201283 1201056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01138 product CDS Protease subunit of ATP-dependent Clp proteases:4710569 forward MW:8442 1201755 1201414 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01139 product CDS FKBP-type peptidyl-prolyl cis-trans isomerases 1:4710211 forward MW:12187 1202177 1201893 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01140 product CDS: hypothetical protein 4709448:4709732 forward MW:10795 1202843 1204411 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01141 product CDS Membrane protein, TerC family:4708782 reverse MW:57941 1205056 1204481 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01142 product CDS Histone acetyltransferase HPA2:4707144 forward MW:21272 1205798 1205118 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01143 product CDS Permeases of the major facilitator superfamily:4706507 forward MW:26060 1209193 1205795 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01144 product CDS membrane protein, putative:4705830 forward MW:39040 1210064 1209183 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01145 product CDS: hypothetical protein 5169648:5170355 forward MW:27440 1212099 1210057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01146 product CDS VgrG protein:5169481 forward MW:76655 1212692 1212177 CDS gene hcpA inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:Q9HI36 locus_tag NYT1canu_01147 product Major exported protein 1213187 1214734 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01148 product CDS Uncharacterized protein ImpA:5166351 reverse MW:58753 1214770 1215270 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01149 product CDS Uncharacterized protein ImpB:5164768 reverse MW:18458 1215300 1216229 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01150 product CDS Uncharacterized protein ImpC:5164238 reverse MW:55731 1216273 1217295 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01151 product CDS ISPsy4, transposase:6120546 reverse MW:37529 1217292 1218101 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01152 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 1218138 1218743 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01153 product CDS Uncharacterized protein ImpC:5164238 reverse MW:55731 1218759 1219166 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01154 product CDS Uncharacterized protein similar to 5162340:5162747 reverse MW:14743 1219264 1221051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01155 product CDS Protein ImpG/VasA:5162194 reverse MW:64891 1221015 1222022 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01156 product CDS Uncharacterized protein ImpH/VasB:5160491 reverse MW:38202 1222032 1224635 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01157 product CDS ClpB protein:5159474 reverse MW:95051 1224637 1226166 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01158 product CDS Sigma-54 dependent transcriptional regulator:5156869 reverse MW:56096 1226216 1226356 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01159 product CDS: hypothetical protein 5155150:5155290 reverse MW:5176 1226410 1226901 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01160 product CDS Type VI secretion lipoprotein/VasD:5155096 reverse MW:18462 1226410 1226478 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 1226898 1228229 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01161 product CDS Uncharacterized protein ImpJ/VasE:5154608 reverse MW:49432 1228229 1229101 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01162 product CDS Outer membrane protein ImpK/VasF, OmpA/MotB domain:5153295 reverse MW:33581 1229115 1232621 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01163 product CDS IcmF-related protein:5152391 reverse MW:131667 1232899 1233732 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01164 product CDS Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1):5148607 reverse MW:30281 1233770 1234780 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01165 product CDS Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1):5147736 reverse MW:36849 1233770 1233847 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 1234808 1235596 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01166 product CDS Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1):5146698 reverse MW:28619 1235635 1236354 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01167 product CDS Transcriptional regulator PhnF:5145871 reverse MW:26600 1236369 1236833 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01168 product CDS PhnG protein:5145137 reverse MW:17161 1236833 1237429 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01169 product CDS PhnH protein:5144673 reverse MW:21260 1237429 1238508 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01170 product CDS PhnI protein:5144077 reverse MW:39500 1238505 1239392 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01171 product CDS PhnJ protein:5143001 reverse MW:33210 1239389 1240210 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01172 product CDS Phosphonates transport ATP-binding protein PhnK:5142117 reverse MW:30106 1240243 1240959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01173 product CDS Phosphonates transport ATP-binding protein PhnL:5141263 reverse MW:26299 1240953 1242098 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01174 product CDS Metal-dependent hydrolase involved in phosphonate metabolism:5140553 reverse MW:41601 1242098 1242664 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01175 product CDS ATP-binding protein PhnN; Guanylate kinase:5139408 reverse MW:21029 1242655 1243404 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01176 product CDS Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein:5138851 reverse MW:27330 1243559 1245925 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01177 product CDS Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone]:5137911 reverse MW:82568 1246310 1246005 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01178 product hypothetical protein 1246909 1246448 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01179 product hypothetical protein 1247485 1247012 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01180 product CDS Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein:5134494 forward MW:11442 1248858 1247485 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01181 product CDS: hypothetical protein 5132648:5134021 forward MW:49163 1250713 1249190 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01182 product CDS putative amidase:5132316 forward MW:54046 1252035 1250884 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01183 product CDS Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase:5130622 forward MW:40180 1253459 1252032 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01184 product CDS Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase:5129474 forward MW:51179 1254469 1253456 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01185 product CDS ABC-type oligopeptide transport system, ATPase component:5128050 forward MW:37022 1255467 1254466 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01186 product CDS peptide ABC transporter, ATP-binding protein:5127040 forward MW:36516 1256392 1255484 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01187 product CDS peptide ABC transporter, permease protein:5126022 forward MW:32410 1257318 1256401 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01188 product CDS peptide ABC transporter, permease protein:5125105 forward MW:33147 1258941 1257421 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01189 product CDS peptide ABC transporter, periplasmic peptide-binding protein:5124085 forward MW:56353 1258941 1258870 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1259138 1260046 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01190 product CDS Transcriptional regulator:5122368 reverse MW:33476 1260231 1261136 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01191 product CDS GTP cyclohydrolase I type 2:5121308 reverse MW:33969 1261148 1261708 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01192 product CDS Carbonic anhydrase, gamma class:5120358 reverse MW:19908 1261760 1262926 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01193 product CDS membrane protein, putative:5119746 reverse MW:43844 1263580 1262975 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01194 product CDS Transcriptional regulator, MerR family:5118531 forward MW:22465 1263879 1265213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01195 product CDS Glutamine synthetase type I:5117627 reverse MW:49063 1265346 1266266 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01196 product CDS Glutamine amidotransferase protein GlxB:5116160 reverse MW:33313 1266263 1266946 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01197 product CDS Glutamate synthase [NADPH] putative GlxC chain:5115243 reverse MW:24035 1266962 1268302 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01198 product CDS Glutamate synthase [NADPH] large chain:5114544 reverse MW:47553 1268679 1268128 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01199 product hypothetical protein 1268836 1270161 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01200 product CDS Ammonium transporter:5112556 reverse MW:41938 1268836 1268913 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 1271914 1270727 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01201 product CDS bacterial luciferase family protein:3606751 reverse MW:44697 1272308 1271973 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01202 product CDS: hypothetical protein 3606810:3607145 reverse MW:11949 1272308 1272249 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 1272632 1273732 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01203 product CDS Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-dependent oxidoreductases;sulfonate monooxygenase:3608569 forward MW:40503 1274055 1275641 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01204 product CDS GGDEF domain protein:3610478 forward MW:58548 1278814 1275671 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01205 product CDS RND efflux system, inner membrane transporter CmeB:3613651 reverse MW:111794 1280011 1278848 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01206 product CDS RND efflux system, membrane fusion protein CmeA:3614845 reverse MW:40909 1280148 1280741 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01207 product CDS Transcriptional regulator NfxB:3615578 forward MW:22057 1282187 1280778 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01208 product CDS Isochorismate synthase:3617024 reverse MW:51284 1282504 1282184 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01209 product CDS Isochorismate pyruvate-lyase:3617341 reverse MW:12334 1284088 1282520 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01210 product CDS iron aquisition 2,3-dihydroxybenzoate-AMP ligase:3618925 reverse MW:56166 1284883 1284101 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01211 product CDS iron aquisition yersiniabactin synthesis enzyme (YbtT,resembles thioesterases):3619720 reverse MW:28868 1285970 1284888 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01212 product CDS Pyochelin biosynthetic protein PchG, oxidoreductase (NAD-binding):3620807 reverse MW:39567 1295482 1285967 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01213 product CDS iron aquisition yersiniabactin synthesis enzyme (Irp1,polyketide synthetase):3630319 reverse MW:347930 1296695 1295469 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01214 product CDS Putative signal transducer:3631532 reverse MW:44340 1302865 1296692 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01215 product CDS iron aquisition yersiniabactin synthesis enzyme (Irp2):3637702 reverse MW:228049 1304671 1302926 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01216 product CDS ABC transporter, ATP-binding/permease protein:3639508 reverse MW:63819 1306449 1304668 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01217 product CDS ABC transporter, ATP-binding/permease protein:3641286 reverse MW:64459 1308607 1306604 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01218 product CDS iron aquisition outermembrane yersiniabactin receptor (FyuA,Psn,pesticin receptor):3643444 reverse MW:73287 1308607 1308545 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 1308754 1309692 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01219 product CDS Transcriptional regulator, AraC family:3644529 forward MW:35357 1312187 1309689 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01220 product CDS TonB-dependent receptor:3647024 reverse MW:89726 1312187 1312086 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 34 product putative signal peptide 1312581 1313186 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01221 product CDS Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone:3648023 forward MW:22126 1313186 1313674 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01222 product CDS Copper metallochaperone, bacterial analog of Cox17 protein:3648511 forward MW:17054 1313186 1313269 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 1314370 1313912 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01223 product CDS phosphoesterase, putative:3649207 reverse MW:16512 1315489 1314473 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01224 product CDS Alcohol dehydrogenase:3650326 reverse MW:35867 1315730 1316572 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01225 product CDS Transcriptional regulator, LysR family:3651409 forward MW:33166 1317197 1316613 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01226 product CDS Histidyl-tRNA synthetase-related domain:3652034 reverse MW:21190 1317252 1317148 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01227 product hypothetical protein 1318028 1317525 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01228 product CDS Histone acetyltransferase HPA2:3652865 reverse MW:18480 1318560 1318111 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01229 product CDS: hypothetical protein 3652948:3653397 reverse MW:16815 1318625 1318867 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01230 product hypothetical protein 1318861 1319700 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01231 product CDS Probable taurine catabolism dioxygenase:3654537 forward MW:37560 1319791 1320042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01232 product CDS: hypothetical protein 3654628:3654879 forward MW:8978 1320578 1320081 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01233 product CDS GAF domain protein:3655415 reverse MW:18203 1320729 1322693 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01234 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):3657530 forward MW:68103 1323675 1322770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01235 product CDS Transcriptional regulator, LysR family:3658512 reverse MW:33385 1323779 1324981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01236 product CDS Acetylornithine aminotransferase:3659818 forward MW:43324 1325105 1325638 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01237 product CDS: hypothetical protein 3659942:3660475 forward MW:18690 1325105 1325167 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 1326133 1325693 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01238 product CDS CBS domain protein:3660970 reverse MW:15906 1326358 1328721 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01239 product CDS DNA polymerase II:3663558 forward MW:89714 1329563 1328718 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01240 product CDS NAD-dependent protein deacetylase of SIR2 family:3664400 reverse MW:30792 1329731 1330573 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01241 product CDS Phenazine biosynthesis protein PhzF like:3665410 forward MW:30266 1331552 1330713 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01242 product CDS Domain often clustered or fused with uracil-DNA glycosylase:3666389 reverse MW:32398 1332769 1331549 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01243 product CDS Radical SAM domain protein:3667606 reverse MW:45307 1333103 1333852 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01244 product CDS Zinc ABC transporter, ATP-binding protein ZnuC:3668584 forward MW:25608 1333849 1334718 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01245 product CDS Zinc ABC transporter, inner membrane permease protein ZnuB:3669556 forward MW:30171 1334730 1335626 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01246 product CDS Zinc ABC transporter, periplasmic-binding protein ZnuA:3670464 forward MW:32028 1334730 1334804 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 1336782 1335676 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01247 product CDS L-arabinose-specific 1-epimerase (mutarotase):3671662 reverse MW:41427 1337124 1337996 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01248 product CDS L-arabinolactonase:3672834 forward MW:31082 1338158 1339171 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01249 product CDS L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2):3674009 forward MW:35918 1338158 1338244 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 1339227 1340750 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01250 product CDS L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2):3675588 forward MW:55212 1340791 1341756 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01251 product CDS L-arabinose transport system permease protein (TC 3.A.1.2.2):3676594 forward MW:34992 1343178 1341853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01252 product CDS two-component system sensor protein:3678016 reverse MW:48910 1343927 1343175 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01253 product CDS Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain:3678765 reverse MW:28099 1344706 1343927 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01254 product CDS Outer membrane protein V:3679544 reverse MW:28142 1344706 1344632 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 1346355 1344742 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01255 product CDS FAD-binding monooxygenase, PheA/TfdB family:3681193 reverse MW:58962 1346593 1347372 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01256 product CDS Transcriptional regulator, TetR family:3682210 forward MW:24084 1347436 1348176 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01257 product CDS: hypothetical protein 3682274:3683014 forward MW:27759 1348176 1348643 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01258 product CDS: hypothetical protein 3683014:3683481 forward MW:17100 1348763 1349614 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01259 product CDS: hypothetical protein 3683610:3684452 forward MW:29934 1348763 1348837 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 1350215 1349838 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01260 product CDS FOG: CheY-like receiver:3685053 reverse MW:13821 1353208 1350212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01261 product CDS Phytochrome, two-component sensor histidine kinase:3688061 reverse MW:110290 1355207 1353570 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01262 product CDS Malate:quinone oxidoreductase:3690057 reverse MW:60327 1355207 1355136 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1356089 1356766 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01263 product CDS Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT:3691604 forward MW:22530 1356766 1357749 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01264 product CDS Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS:3692587 forward MW:34990 1357759 1359975 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01265 product CDS Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR:3694813 forward MW:79737 1359978 1360946 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01266 product CDS xanthine dehydrogenase accessory factor XdhC, putative:3695784 forward MW:33827 1361550 1360927 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01267 product CDS CTP:molybdopterin cytidylyltransferase:3696388 reverse MW:22261 1361694 1362278 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01268 product CDS NAD(P)H-flavin oxidoreductase:3697116 forward MW:21702 1363952 1362561 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01269 product CDS Succinate-semialdehyde dehydrogenase [NAD] ; Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)3697399:3698790 reverse MW:50139 1364055 1364933 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01270 product CDS LysR family transcriptional regulator YneJ:3699771 forward MW:32268 1366033 1364939 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01271 product CDS Tartrate dehydrogenase / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83):3700871 reverse MW:40322 1366146 1367051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01272 product CDS Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme:3701889 forward MW:33541 1368252 1367098 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01273 product CDS ABC transporter ATP-binding protein:3703090 reverse MW:41650 1369064 1368249 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01274 product CDS polyamine ABC transporter, permease protein:3703902 reverse MW:29581 1369925 1369071 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01275 product CDS ABC transporter permease protein:3704763 reverse MW:31128 1371037 1370012 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01276 product CDS Spermidine/putrescine-binding periplasmic protein:3705875 reverse MW:36814 1371037 1370960 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 1372436 1371327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01277 product CDS 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II:3707319 reverse MW:42188 1372531 1372821 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01278 product CDS: hypothetical protein 3707369:3707659 forward MW:10749 1373513 1372950 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01279 product CDS Nudix hydrolase family protein:3708351 reverse MW:21093 1374267 1373515 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01280 product CDS Predicted regulator PutR for proline utilization, GntR family:3709105 reverse MW:28046 1374943 1374458 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01281 product CDS Nitrilotriacetate monooxygenase component B:3709781 reverse MW:17356 1376438 1374957 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01282 product CDS Aldehyde dehydrogenase:3711276 reverse MW:53173 1377283 1376435 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01283 product CDS Beta-ketoadipate enol-lactone hydrolase:3712121 reverse MW:29990 1377908 1377318 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01284 product CDS: hypothetical protein 3712156:3712746 reverse MW:21517 1378195 1379334 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01285 product CDS Threonine dehydrogenase-dependent dehydrogenases:3714172 forward MW:40663 1379429 1380289 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01286 product CDS Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases):3715127 forward MW:30660 1380491 1381465 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01287 product CDS: hypothetical protein 3715329:3716303 forward MW:32369 1381902 1383332 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01288 product CDS 2-ketoglutaric semialdehyde dehydrogenase:3718170 forward MW:50481 1384349 1383408 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01289 product CDS Murein-DD-endopeptidase:3719181 reverse MW:34038 1384349 1384266 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 1384611 1385171 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01290 product CDS: hypothetical protein 3719449:3720009 forward MW:21035 1385456 1385274 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01291 product CDS: hypothetical protein 3720112:3720294 reverse MW:6401 1385984 1385628 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01292 product CDS hypothetical protein:3720822 reverse MW:12796 1385984 1385913 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1386186 1387001 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01293 product CDS Shikimate 5-dehydrogenase I gamma:3721839 forward MW:29097 1387691 1387026 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01294 product CDS Virulence factor mviM:3722529 reverse MW:24500 1387847 1388356 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01295 product CDS: hypothetical protein 3722685:3723194 forward MW:18773 1388617 1389771 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01296 product CDS Major facilitator family transporter:3724609 forward MW:39959 1390772 1389768 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01297 product CDS Transcriptional regulator, LysR family:3725508 reverse MW:33271 1390803 1391045 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01298 product CDS lipoprotein, putative:3725883 forward MW:8510 1390803 1390859 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 1391080 1391841 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01299 product CDS Integral membrane protein TerC:3726679 forward MW:26796 1392122 1391943 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01300 product CDS: hypothetical protein 3726781:3726960 reverse MW:6465 1392342 1393037 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01301 note CDS Conserved domain protein 3727273:3727875 forward MW:22058 product hypothetical protein 1394392 1393109 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01302 product CDS Oxidoreductase:3729230 reverse MW:46562 1394575 1394651 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_01303 product tRNA-Val(gac) 1394816 1394892 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_01304 product tRNA-Val(gac) 1396079 1395018 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01305 product CDS Nucleoside-diphosphate-sugar epimerases:3730917 reverse MW:38987 1396577 1396191 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01306 product CDS NTP pyrophosphohydrolases including oxidative damage repair enzymes:3731415 reverse MW:14103 1397977 1396901 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01307 product CDS Alcohol dehydrogenase:3732815 reverse MW:38655 1398268 1401162 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01308 product CDS GAF domain/GGDEF domain/EAL domain protein:3736000 forward MW:107024 1401342 1401896 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01309 product CDS: hypothetical protein 3736180:3736734 forward MW:19380 1402551 1403573 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01310 product hypothetical protein 1405038 1404100 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01311 product CDS Fructokinase:604779 forward MW:33803 1406544 1405063 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01312 product CDS Xylulose kinase:603816 forward MW:52748 1408036 1406555 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01313 product CDS Multiple polyol-specific dehydrogenase:602324 forward MW:54394 1409161 1408055 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01314 product CDS Various polyols ABC transporter, ATP-binding component:600824 forward MW:39985 1410026 1409193 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01315 product CDS Various polyols ABC transporter, permease component 2:599686 forward MW:30927 1410969 1410037 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01316 product CDS Various polyols ABC transporter, permease component 1:598842 forward MW:34001 1412379 1411057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01317 product CDS Various polyols ABC transporter, periplasmic substrate-binding protein:597822 forward MW:48255 1412379 1412299 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 1412455 1412556 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01318 product hypothetical protein 1413525 1412620 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01319 product CDS Transcriptional regulator of various polyols utilization, AraC family:596259 forward MW:34708 1413653 1414438 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01320 product CDS Precorrin-6A synthase:595226 reverse MW:29303 1415745 1414423 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01321 product CDS Glycosyltransferase:594456 forward MW:49093 1416097 1415738 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01322 product CDS Response regulator:593141 forward MW:13053 1416444 1419956 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01323 product CDS Signal transduction histidine kinase:592435 reverse MW:131136 1420015 1420857 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01324 product CDS Chemotaxis protein methyltransferase, CheR-like:588843 reverse MW:31405 1420854 1421468 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01325 product CDS Protein-glutamate methylesterase:588025 reverse MW:21929 1421462 1422643 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01326 product CDS two-component hybrid sensor and regulator:587417 reverse MW:44382 1422735 1423112 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01327 product CDS Response regulator:586144 reverse MW:13621 1425170 1423140 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01328 product CDS Histidine kinase/response regulator hybrid protein:585739 forward MW:74067 1426651 1425167 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01329 product CDS KaiC:583712 forward MW:54506 1426786 1427685 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01330 product CDS Enoyl-CoA hydratase [valine degradation]:582093 reverse MW:33221 1427738 1428574 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01331 product CDS NADH pyrophosphatase:581141 reverse MW:31086 1429321 1428542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01332 product CDS: hypothetical protein 579558:580337 forward MW:27206 1430575 1429427 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01333 product CDS Myo-inositol 2-dehydrogenase:579452 forward MW:41060 1431443 1430676 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01334 product CDS Oxidoreductase, short-chain dehydrogenase/reductase family:578203 forward MW:26788 1432538 1431471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01335 product CDS Predicted aminoglycoside phosphotransferase:577408 forward MW:40441 1433058 1432741 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01336 product CDS SCP-2 sterol transfer family protein:576138 forward MW:11249 1433824 1433114 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01337 product CDS Phosphoglycerate mutase family protein:575765 forward MW:25865 1434030 1434668 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01338 product CDS Peptidase, U7 family:574849 reverse MW:37913 1434640 1435056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01339 product CDS Peptidase, U7 family:574849 reverse MW:37913 1435715 1435221 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01340 product CDS Oxidoreductase probably involved in sulfite reduction:573662 forward MW:18857 1437357 1435699 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01341 product CDS Sulfite reductase [NADPH] hemoprotein beta-component:573184 forward MW:62287 1437697 1437810 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01342 product CDS: hypothetical protein 571073:571186 reverse MW:4042 1437907 1439007 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01343 product CDS Periplasmic sugar-binding domain protein:570976 reverse MW:40328 1437907 1437975 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 1442736 1439017 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01344 product CDS 5-methyltetrahydrofolate--homocysteine methyltransferase:569866 forward MW:136054 1442894 1445206 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01345 product CDS cis/trans isomerase:565977 reverse MW:85835 1442894 1442956 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 1445382 1446404 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01346 product CDS Exopolysaccharide production protein ExoZ:563603 reverse MW:42080 1446475 1447068 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01347 product CDS Thioredoxin:562408 reverse MW:21442 1449278 1447329 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01348 product CDS Methylcrotonyl-CoA carboxylase biotin-containing subunit:561554 forward MW:70201 1450123 1449275 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01349 product CDS Methylglutaconyl-CoA hydratase:559608 forward MW:31336 1451745 1450138 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01350 product CDS Methylcrotonyl-CoA carboxylase carboxyl transferase subunit:558745 forward MW:57639 1452922 1451759 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01351 product CDS Isovaleryl-CoA dehydrogenase:557124 forward MW:42270 1453462 1453045 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01352 product CrcZ 1454558 1453659 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01353 product CDS Hydroxymethylglutaryl-CoA lyase:555224 forward MW:31505 1454981 1454589 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01354 product CDS Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family:554294 forward MW:14905 1456078 1455149 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01355 product CDS Transcriptional regulator, LysR family:553734 forward MW:35090 1456261 1457490 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01356 product CDS Acyl-CoA dehydrogenase:552622 reverse MW:45375 1458893 1457538 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01357 product CDS Phosphate-binding protein:551345 forward MW:48153 1458893 1458813 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 1459824 1459012 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01358 product CDS Exodeoxyribonuclease III:549871 forward MW:30923 1460015 1460686 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01359 product CDS Histone acetyltransferase HPA2:548868 reverse MW:25198 1460746 1462470 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01360 product CDS Outer membrane protein:548137 reverse MW:63597 1460746 1460811 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 1462476 1466156 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01361 product CDS putative exported protein:546407 reverse MW:130964 1466262 1467179 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01362 product CDS LysR family transcriptional regulator YcjZ:542621 reverse MW:33624 1467270 1467770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01363 product CDS Thiol peroxidase, Tpx-type:541613 reverse MW:17421 1467922 1469223 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01364 product CDS HlyD family secretion protein:540961 reverse MW:46615 1469220 1472330 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01365 product CDS Acriflavin resistance plasma membrane protein:539663 reverse MW:112053 1472327 1475434 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01366 product CDS Acriflavin resistance plasma membrane protein:536556 reverse MW:112442 1475431 1476903 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01367 product CDS Heavy metal RND efflux outer membrane protein, CzcC family:533452 reverse MW:52978 1477071 1479188 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01368 product CDS Sensory box/GGDEF family protein:531812 reverse MW:76281 1479301 1480047 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01369 product CDS Oxidoreductase, short chain dehydrogenase/reductase family:529582 reverse MW:26151 1480249 1480094 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01370 product CDS: hypothetical protein 528634:528789 forward MW:5339 1480559 1482577 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01371 product CDS Alpha-amylase:528324 reverse MW:76241 1482597 1485923 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01372 product CDS Trehalose synthase:526286 reverse MW:124777 1485920 1488145 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01373 product CDS 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type:522963 reverse MW:83806 1490963 1488186 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01374 product CDS Outer membrane autotransporter barrel:520697 forward MW:96896 1492360 1491131 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01375 product CDS transporter, putative:517752 forward MW:41317 1492552 1493685 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01376 product CDS hypothetical protein, not 6-phosphogluconolactonase:516331 reverse MW:40501 1492552 1492617 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 1495342 1493753 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01377 product CDS ABC transporter ATP-binding protein uup:515130 forward MW:58129 1496576 1495713 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01378 product CDS Lipopolysaccharide core biosynthesis protein RfaZ:513170 forward MW:31944 1497162 1497022 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01379 product CDS: hypothetical protein 511721:511861 forward MW:5319 1497468 1498169 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01380 product CDS probable exported protein 510714:511415 reverse MW:25394 1497468 1497545 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 1498257 1498805 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01381 product CDS Histone acetyltransferase HPA2:510548 reverse MW:17151 1498918 1499343 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01382 product CDS: hypothetical protein 509540:509965 reverse MW:15637 1499459 1499902 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01383 product CDS: hypothetical protein 508981:509424 reverse MW:17068 1499915 1500310 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01384 product CDS Pyruvate:ferredoxin oxidoreductase-oxoacid:ferredoxin oxidoreductases, alpha subunit:508827 reverse MW:8752 1500637 1501488 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01385 product CDS Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2):508246 reverse MW:30813 1500637 1500720 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 1501552 1502214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01386 product CDS amino acid ABC transporter, permease protein:507331 reverse MW:24467 1502224 1502886 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01387 product CDS Amino acid ABC transporter, permease protein:506659 reverse MW:24273 1502883 1503674 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01388 product CDS amino acid ABC transporter, ATP-binding protein:506000 reverse MW:29230 1503711 1504097 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01389 product CDS Endoribonuclease L-PSP family protein:505172 reverse MW:14115 1504195 1504959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01390 product CDS Transcriptional regulator, IclR family:504688 reverse MW:28605 1504977 1506212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01391 product CDS D-serine deaminase:503891 reverse MW:43483 1506241 1507164 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01392 product CDS 2-dehydro-3-deoxygluconate kinase:502642 reverse MW:33407 1507294 1509786 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01393 product CDS Helicase IV:501589 reverse MW:93544 1510063 1509797 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01394 product CDS: hypothetical protein 498820:499086 forward MW:9552 1510452 1511531 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01395 product CDS Putrescine ABC transporter, periplasmic putrescine-binding protein:498431 reverse MW:39190 1510452 1510508 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 1512255 1511542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01396 product CDS ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component:497341 forward MW:26171 1513107 1512259 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01397 product CDS ABC transporter permease protein with unknown substrate:496624 forward MW:30806 1514114 1513104 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01398 product CDS ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components:495779 forward MW:36594 1514114 1514004 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 37 product putative signal peptide 1514613 1515299 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01399 product CDS contains type I hydrophobic transmembrane region and ATP/GTP binding motif:494270 reverse MW:25130 1516301 1515306 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01400 product CDS Aldo-keto reductase:493577 forward MW:36054 1516716 1517333 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01401 product CDS SOS-response repressor and protease LexA:492167 reverse MW:22563 1517330 1517953 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01402 product CDS RecA/RadA recombinase:491553 reverse MW:22049 1517961 1519376 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01403 product CDS DNA polymerase-like protein 489507:490922 reverse MW:53011 1519373 1522468 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01404 product CDS DNA polymerase III alpha subunit:489510 reverse MW:115942 1522539 1523390 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01405 product CDS NOHBY730; no in Saccharomyces cerevisiae:486344 reverse MW:31844 1524324 1523395 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01406 product CDS Mg2+ and Co2+ transporters:485488 forward MW:34856 1525915 1524329 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01407 product CDS ribosomal protein S6 glutaminyl transferase related protein:484554 forward MW:60091 1526009 1527127 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01408 product CDS GNAT family acetyltransferase 481756:482874 reverse MW:41922 1527169 1528068 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01409 product CDS polysaccharide deacetylase family protein:481714 reverse MW:33354 1527169 1527258 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 1529335 1528076 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01410 product CDS Amidohydrolase:480807 forward MW:44364 1530654 1529332 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01411 product CDS Permeases of the major facilitator superfamily:479551 forward MW:47286 1531740 1530844 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01412 product CDS transcriptional regulator, LysR family:478039 forward MW:32931 1532670 1531765 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01413 product CDS Transcriptional regulator, LysR family:477118 forward MW:32978 1532825 1535872 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01414 product CDS Fe-S protein, of lactate dehydrogenase 473011:476058 reverse MW:111925 1536838 1535951 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01415 product CDS Dienelactone hydrolase family:472932 forward MW:32274 1537056 1538111 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01416 product CDS GGDEF domain protein:471863 reverse MW:40526 1538219 1539169 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01417 product CDS Transcriptional regulator, LysR family:470664 reverse MW:34166 1539532 1540992 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01418 product CDS Oxidoreductase:469351 reverse MW:53301 1540989 1541963 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01419 product CDS Dipeptide transport system permease protein DppB (TC 3.A.1.5.2):467894 reverse MW:36078 1541960 1542880 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01420 product CDS Dipeptide transport system permease protein DppC (TC 3.A.1.5.2):466923 reverse MW:33100 1542877 1543890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01421 product CDS Peptide ABC transporter, ATP-binding protein:466006 reverse MW:36275 1543880 1544893 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01422 product CDS Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2):465003 reverse MW:37182 1544973 1546538 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01423 product CDS Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1):463910 reverse MW:56901 1544973 1545041 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 1546610 1547131 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01424 note CDS Uncharacterized protein conserved in bacteria 461752:462273 reverse MW:18655 product hypothetical protein 1547131 1547721 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01425 product CDS Alkylhydroperoxidase AhpD domain protein:461752 reverse MW:21606 1549394 1547946 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01426 product CDS Fatty acid desaturase:460937 forward MW:54152 1549584 1550309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01427 product CDS: hypothetical protein 458574:459239 reverse MW:25540 1550303 1551418 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01428 product CDS: hypothetical protein 457465:458580 reverse MW:41636 1552314 1551406 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01429 product CDS Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold:457477 forward MW:34396 1553205 1552339 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01430 product CDS: hypothetical protein 455678:456544 forward MW:34136 1553329 1554258 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01431 product CDS: hypothetical protein 454625:455554 reverse MW:35865 1554258 1555862 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01432 product CDS probable auxin-responsive-like protein:454625 reverse MW:57942 1555847 1556923 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01433 product CDS Probable vanillate O-demethylase oxygenase subunit oxidoreductase protein:453036 reverse MW:40978 1557073 1557834 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01434 product CDS Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2):451810 reverse MW:27907 1557855 1558865 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01435 product CDS Dipeptide transport system permease protein DppB (TC 3.A.1.5.2); putative hemin permease:451028 reverse MW:35672 1558862 1559713 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01436 product CDS Dipeptide transport system permease protein DppC (TC 3.A.1.5.2):450021 reverse MW:29997 1559706 1560554 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01437 product CDS Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2):449177 reverse MW:30754 1560551 1561267 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01438 product CDS Putative glutathione transporter, ATP-binding component:448332 reverse MW:26166 1561499 1562008 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01439 product CDS RNA polymerase sigma-70 factor, ECF subfamily:447294 reverse MW:16049 1562005 1562970 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01440 product CDS transmembrane sensor, putative:446878 reverse MW:35388 1563040 1565442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01441 product CDS TonB-dependent ferric achromobactin receptor protein:445843 reverse MW:86708 1563040 1563141 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 34 product putative signal peptide 1565768 1567144 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01442 product CDS Achromobactin biosynthesis protein AcsF; Diaminobutyrate--2-oxoglutarate aminotransferase:443115 reverse MW:49319 1567335 1569119 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01443 product CDS Achromobactin biosynthesis protein AcsD @ Siderophore synthetase superfamily, group A:441548 reverse MW:66944 1569112 1570320 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01444 product CDS Achromobactin biosynthesis protein AcsE, Orn/DAP/Arg decarboxylase family:439771 reverse MW:44821 1570317 1571723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01445 product CDS Permease of the major facilitator superfamily in achromobactin biosynthesis operon:438566 reverse MW:49992 1571745 1573598 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01446 product CDS Uncharacterized siderophore S biosynthesis protein, AcsC-like @ Siderophore synthetase superfamily, group C @ Siderophore synthetase component, ligase:437138 reverse MW:70036 1573595 1574371 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01447 product CDS Achromobactin biosynthesis protein AcsB, HpcH/HpaI aldolase family:435285 reverse MW:27574 1574376 1576259 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01448 product CDS Achromobactin biosynthesis protein AcsA @ Siderophore synthetase superfamily, group B:434507 reverse MW:71370 1576249 1577169 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01449 product CDS Siderophore achromobactin ABC transporter, substrate-binding protein:432634 reverse MW:33873 1577166 1578155 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01450 product CDS Siderophore achromobactin ABC transporter, permease protein:431717 reverse MW:33989 1578148 1579179 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01451 product CDS Siderophore achromobactin ABC transporter, permease protein:430735 reverse MW:35689 1579190 1579981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01452 product CDS Siderophore achromobactin ABC transporter, ATPase component:429693 reverse MW:29052 1579978 1580757 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01453 product CDS Uncharacterized Fe-S protein in siderophore biosynthesis operon:428905 reverse MW:29474 1580748 1581377 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01454 product CDS Putative achromobactin biosynthesis protein, related to 2-demethylmenaquinone methyltransferase:428135 reverse MW:21880 1581673 1583034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01455 product CDS methyl-accepting chemotaxis protein:427210 reverse MW:49916 1583345 1584946 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01456 product CDS: hypothetical protein 423937:425475 reverse MW:57182 1585041 1585159 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01457 product rsmX 1586493 1585222 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01458 product CDS Uncharacterized protein containing a von Willebrand factor type A (vWA) domain:423661 forward MW:45538 1587055 1586549 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01459 product CDS lipoprotein, putative:422334 forward MW:18280 1587055 1586984 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1587797 1587057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01460 product CDS Methyl-accepting chemotaxis protein:421826 forward MW:26054 1587797 1587723 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 1589377 1587830 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01461 product CDS: hypothetical protein 419545:421053 forward MW:55907 1590590 1589367 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01462 product CDS ABC-type antimicrobial peptide transport system, permease component:419516 forward MW:43618 1591242 1590574 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01463 product CDS ABC transporter, ATP-binding protein:418309 forward MW:22632 1593259 1591268 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01464 product CDS PpkA:417615 forward MW:71594 1593259 1593188 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1594290 1593256 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01465 product CDS: hypothetical protein 414593:415627 forward MW:36489 1596993 1594294 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01466 product CDS Putative virulence factor:414589 forward MW:95929 1600124 1596990 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01467 product CDS SrfB:411893 forward MW:117417 1601506 1600136 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01468 product CDS Putative virulence factor:408747 forward MW:48127 1601840 1603018 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01469 note CDS Uncharacterized protein conserved in bacteria 405865:407043 reverse MW:43786 product hypothetical protein 1603476 1603036 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01470 product CDS TspO/MBR family protein:405847 forward MW:16145 1603822 1604313 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01471 product CDS cupin family protein:404791 reverse MW:7851 1603822 1603890 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 1604403 1605098 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01472 product CDS 4-carboxymuconolactone decarboxylase:404357 reverse MW:20145 1606018 1605104 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01473 product CDS Transcriptional regulator, LysR family:403779 forward MW:33620 1607842 1606058 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01474 product CDS Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR:402825 forward MW:63802 1607898 1608071 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01475 product hypothetical protein 1609264 1608269 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01476 product CDS Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS:400614 forward MW:35059 1609929 1609261 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01477 product CDS Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT:399622 forward MW:14329 1610450 1610845 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01478 product CDS: hypothetical protein 398038:398433 reverse MW:14428 1610450 1610530 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 1611552 1611061 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01479 product CDS hypothetical protein:397822 forward MW:17303 1612151 1611819 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01480 product CDS 3-oxoacyl-[acyl-carrier protein] reductase:397064 forward MW:11486 1612418 1612326 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01481 product hypothetical protein 1612533 1612372 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01482 product hypothetical protein 1612802 1613044 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01483 product CDS Polymyxin resistance protein PmrM:396015 reverse MW:6673 1613022 1614416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01484 product CDS UDP-glucose dehydrogenase:395861 reverse MW:51750 1614725 1615555 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01485 product CDS PAP2 superfamily protein:394158 reverse MW:31332 1615808 1618204 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01486 product CDS lectin repeat domain protein:393075 reverse MW:87716 1615808 1615876 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 1619450 1618431 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01487 product CDS Permeases of the major facilitator superfamily:390452 forward MW:35453 1621374 1619770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01488 product CDS Signal transduction histidine kinase:389113 forward MW:58903 1622658 1621516 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01489 product CDS: hypothetical protein 386225:387367 forward MW:43064 1623842 1622661 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01490 product CDS UDP-galactopyranose mutase:386222 forward MW:45185 1625014 1623830 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01491 product CDS Glycosyltransferase:385053 forward MW:43755 1625414 1626442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01492 product CDS UDP-glucose 4-epimerase:383241 reverse MW:29182 1627011 1626463 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01493 product CDS Putrescine utilization regulator:382420 forward MW:20067 1627888 1627124 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01494 product CDS Gamma-glutamyl-GABA hydrolase:381759 forward MW:29274 1628016 1628918 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01495 product CDS Transcriptional regulator, LysR family:380867 reverse MW:32727 1629066 1630130 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01496 product CDS Probable vanillate O-demethylase oxygenase subunit oxidoreductase protein:379817 reverse MW:39908 1630200 1631150 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01497 product CDS Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase:378683 reverse MW:34533 1631861 1631151 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01498 product CDS Transcriptional regulator for ferulate or vanillate catabolism:377732 forward MW:25967 1633907 1631937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01499 product CDS GGDEF domain/EAL domain protein:376946 forward MW:71666 1634903 1634211 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01500 product CDS Chromosome segregation ATPases:374672 forward MW:25064 1634903 1634826 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 1635942 1635043 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01501 product CDS Transcriptional regulator, LysR family:373840 forward MW:33145 1636054 1637430 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01502 product CDS Major facilitator family transporter:372760 reverse MW:47268 1637450 1638724 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01503 product CDS Glucarate dehydratase:371433 reverse MW:46745 1639627 1638794 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01504 product CDS Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2):370089 forward MW:29990 1639627 1639559 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 1640428 1639691 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01505 product CDS Glutamate Aspartate transport ATP-binding protein GltL (TC 3.A.1.3.4):369192 forward MW:27259 1641179 1640439 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01506 product CDS glutamine ABC transporter, permease protein:368444 forward MW:27498 1641887 1641186 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01507 product CDS Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4):367697 forward MW:25891 1642761 1642009 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01508 product CDS Short chain dehydrogenase:366874 forward MW:26547 1643662 1642892 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01509 product CDS Lactam utilization protein LamB:365991 forward MW:26860 1644074 1643667 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01510 product CDS Biotin carboxyl carrier protein of acetyl-CoA carboxylase:365216 forward MW:14664 1645045 1644074 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01511 product CDS Allophanate hydrolase 2 subunit 2:364809 forward MW:34324 1645713 1645042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01512 product CDS Allophanate hydrolase 2 subunit 1:363841 forward MW:24280 1647062 1645710 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01513 product CDS Biotin carboxylase of acetyl-CoA carboxylase:363173 forward MW:49177 1647540 1647103 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01514 product CDS Biotin carboxyl carrier protein of acetyl-CoA carboxylase:361780 forward MW:15311 1648568 1647660 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01515 product CDS Nitrogen assimilation regulatory protein Nac:361223 forward MW:32871 1648856 1650064 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01516 product CDS Aspartate aminotransferase:360027 reverse MW:42937 1650075 1651634 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01517 product CDS Permeases of the major facilitator superfamily:358808 reverse MW:55376 1651707 1653038 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01518 product CDS outer membrane porin OprE:357176 reverse MW:49069 1653207 1654880 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01519 product CDS: hypothetical protein 354003:355676 reverse MW:62796 1654870 1655832 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01520 product CDS: hypothetical protein 353051:354013 reverse MW:36611 1654870 1654947 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 1655974 1655837 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01521 product hypothetical protein 1656302 1655994 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01522 product CDS: hypothetical protein 352581:352889 forward MW:11276 1657513 1656329 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01523 product CDS: hypothetical protein 351370:352554 forward MW:41851 1657513 1657442 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1658761 1657754 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01524 product CDS Oxidoreductase:351129 forward MW:35686 1658937 1659518 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01525 product CDS Transcriptional regulator, TetR family:349946 reverse MW:20330 1660498 1659524 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01526 product CDS Allophanate hydrolase 2 subunit 2:349359 forward MW:34194 1661367 1660495 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01527 product CDS Allophanate hydrolase 2 subunit 1:348388 forward MW:32446 1662211 1661456 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01528 product CDS Lactam utilization protein LamB:347427 forward MW:27390 1662338 1663255 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01529 product CDS Transcriptional regulator, LysR family:346545 reverse MW:34347 1663397 1663266 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01530 product CDS Transcriptional regulator, LysR family:345617 forward MW:4972 1663943 1663599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01531 product CDS: hypothetical protein 344940:345284 forward MW:13210 1665349 1664108 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01532 product CDS 3-ketoacyl-CoA thiolase:344775 forward MW:43297 1667247 1665346 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01533 product CDS Feruloyl-CoA synthetase:343537 forward MW:68678 1668836 1667388 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01534 product CDS Vanillin dehydrogenase (Hydroxybenzaldehyde dehydrogenase):341495 forward MW:50303 1669772 1668942 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01535 product CDS 4-hydroxycinnamoyl CoA hydratase/lyase (Enoyl-CoA hydratase/lyase):339941 forward MW:31146 1669984 1670472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01536 product CDS Transcriptional regulator, MarR family:338899 reverse MW:17890 1671864 1670515 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01537 product CDS Phenylacetic acid-specific porin; hydroxycinnamate specific porine:338368 forward MW:49224 1672191 1673405 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01538 product CDS Putative hydroxycinnamate transporter:336692 reverse MW:41594 1673751 1674773 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01539 product hypothetical protein 1676423 1675476 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01540 product CDS Protein involved in meta-pathway of phenol degradation:5464068 reverse MW:34406 1676423 1676352 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1677277 1676510 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01541 product CDS 3-alpha-hydroxysteroid dehydrogenase:5464922 reverse MW:27551 1678844 1677363 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01542 product CDS Putative benzaldehyde dehydrogenase oxidoreductase protein:5466488 reverse MW:33348 1679122 1680894 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01543 product CDS sigma-54 dependent transcriptional regulator:5468538 forward MW:64723 1683007 1680944 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01544 product CDS glycosidase, putative:5470651 reverse MW:75898 1683668 1683153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01545 product CDS: hypothetical protein 5470797:5471312 reverse MW:18552 1684018 1683758 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01546 product CDS Transcriptional regulator, LysR family:5471662 reverse MW:9437 1684867 1684262 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01547 product CDS ThiJ/PfpI family protein:5472511 reverse MW:22220 1684989 1685942 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01548 product CDS Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain:5473586 forward MW:34980 1687080 1685902 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01549 product CDS Beta-lactamase class C and other penicillin binding proteins:5474724 reverse MW:41680 1688238 1687084 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01550 product CDS Alcohol dehydrogenase:5475882 reverse MW:41374 1688919 1688275 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01551 product CDS L-lysine permease:5476563 reverse MW:22852 1690695 1688947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01552 note CDS Uncharacterized protein conserved in bacteria 5476591:5478339 reverse MW:64397 product hypothetical protein 1692809 1690695 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01553 product CDS Ornithine cyclodeaminase:5480453 reverse MW:76179 1694137 1692815 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01554 product CDS Lysine N6-hydroxylase/L-ornithine N5-oxygenase family protein:5481781 reverse MW:48837 1695166 1694192 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01555 product CDS: hypothetical protein 5481836:5482789 reverse MW:34246 1696326 1695163 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01556 product CDS Oxidoreductase, FAD-binding:5483970 reverse MW:41093 1697840 1696341 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01557 product CDS Methionyl-tRNA synthetase-related protein:5485469 reverse MW:54530 1698225 1697833 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01558 product CDS Gentisate 1,2-dioxygenase:5485869 reverse MW:14751 1699540 1698575 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01559 product CDS site-specific recombinase, phage integrase family:5487184 reverse MW:36712 1699769 1700212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01560 product CDS: hypothetical protein 5487413:5487856 forward MW:16185 1701287 1700238 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01561 product CDS YhdH, a putative quinone oxidoreductase:5488865 reverse MW:34376 1701919 1701284 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01562 product CDS Transcriptional regulator, TetR family:5489515 reverse MW:22123 1702057 1703136 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01563 product CDS Enoyl-[acyl-carrier-protein] reductase [FMN]:5490780 forward MW:38194 1703238 1704005 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01564 product CDS Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1):5491649 forward MW:26962 1703238 1703321 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 1704006 1704686 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01565 product CDS Molybdenum transport system permease protein ModB (TC 3.A.1.8.1):5492330 forward MW:23894 1704690 1705778 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01566 product CDS Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1):5493422 forward MW:39951 1705867 1706922 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01567 product CDS DNA topoisomerase IB (poxvirus type):5494566 forward MW:39619 1707090 1707175 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_01568 product tRNA-Leu(taa) 1707507 1707791 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01569 product hypothetical protein 1708023 1707751 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01570 product CDS prophage PSPPH06, putative adenine modification methytransferase:5495667 reverse MW:10547 1708545 1708054 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01571 product CDS Site-specific DNA methylase:5496165 reverse MW:17619 1708722 1709798 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01572 product CDS ATPases involved in chromosome partitioning:5497442 forward MW:43675 1709890 1710615 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01573 product hypothetical protein 1711103 1711423 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01574 product hypothetical protein 1712323 1711595 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01575 product CDS chitin-binding protein, putative:5499424 reverse MW:7037 1712882 1712496 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01576 product CDS Lactoylglutathione lyase:5500526 reverse MW:14463 1713897 1712884 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01577 product CDS oxidoreductase, 2OG-Fe(II) oxygenase family:5501541 reverse MW:37826 1714761 1714123 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01578 product CDS N-carbamoylsarcosine amidase:4467821 forward MW:23423 1715035 1714962 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_01579 product tRNA-Cys(gca) 1716968 1715238 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01580 product CDS Tannase:4466706 forward MW:62305 1716968 1716885 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 1717415 1716981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01581 product CDS RND efflux system, outer membrane lipoprotein CmeC:4464963 forward MW:12659 1719028 1717628 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01582 product CDS Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-dependent oxidoreductases:4464316 forward MW:52245 1719473 1719033 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01583 product CDS Acyl-CoA dehydrogenase family protein:4462911 forward MW:15976 1720703 1719489 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01584 product CDS Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme:4462455 forward MW:45166 1721665 1720889 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01585 product CDS ABC transporter ATP-binding protein:4461055 forward MW:28003 1723001 1721670 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01586 product CDS Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein:4460274 forward MW:48014 1723001 1722918 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 1724119 1723052 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01587 product CDS Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1):4458892 forward MW:38816 1725024 1724143 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01588 product CDS High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1):4457801 forward MW:31147 1725822 1725028 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01589 product CDS Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1):4456916 forward MW:29186 1726910 1725819 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01590 product CDS Long-chain-fatty-acid--CoA ligase:4456125 forward MW:39576 1727191 1728429 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01591 product CDS Acyl-CoA dehydrogenase family protein:4454753 reverse MW:44755 1729428 1728442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01592 product CDS Putative transmembrane sugar transport protein:4453502 forward MW:33742 1730429 1729425 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01593 product CDS Putative transmembrane sugar transport protein:4452519 forward MW:34224 1731984 1730416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01594 product CDS ribose ABC transporter, ATP-binding protein, putative:4451528 forward MW:56258 1733005 1732001 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01595 product CDS Ribose transport ATP-binding protein rbsA:4449943 forward MW:35805 1733005 1732898 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 36 product putative signal peptide 1733040 1733237 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01596 product CDS: hypothetical protein 4448707:4448904 reverse MW:6821 1734858 1733230 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01597 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):4448714 forward MW:58146 1735065 1735493 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01598 product CDS VirK protein:4446879 reverse MW:14906 1735065 1735127 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 1736131 1735679 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01599 product CDS Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase):2622327 forward MW:19180 1736534 1737301 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01600 product CDS Cysteine protease:4445410 reverse MW:28550 1738506 1737319 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01601 product CDS Xylose activator XylR (AraC family):4444625 forward MW:43367 1738685 1740001 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01602 product CDS Xylose isomerase:4443259 reverse MW:49262 1740142 1741143 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01603 product CDS Xylose ABC transporter, periplasmic xylose-binding protein XylF:4441802 reverse MW:36007 1740142 1740210 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 1741252 1742838 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01604 product CDS D-xylose transport ATP-binding protein XylG:4440692 reverse MW:57256 1742839 1743975 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01605 product CDS Xylose ABC transporter, permease protein XylH:4439105 reverse MW:39940 1744432 1743998 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01606 product CDS TdcF protein:4437946 forward MW:15117 1746057 1744474 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01607 product CDS Amine oxidase, flavin-containing:4437470 forward MW:57575 1747009 1746080 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01608 product CDS Periplasmic binding protein:4435864 forward MW:32742 1747009 1746938 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1747823 1747038 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01609 product CDS Glutamate transport ATP-binding protein:4434906 forward MW:28770 1748790 1747816 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01610 product CDS Amino acid ABC transporter permease protein:4434128 forward MW:36030 1751284 1748834 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01611 product CDS Outer membrane receptor proteins, mostly Fe transport:4433110 forward MW:87739 1752267 1751818 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01612 product CDS: hypothetical protein 4429458:4430126 forward MW:24467 1752341 1753363 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01613 product CDS ISPsy4, transposase:6120546 reverse MW:37529 1753360 1754169 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01614 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 1754453 1754202 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01615 product CDS: hypothetical protein 4429458:4430126 forward MW:24467 1754453 1754382 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1754841 1755194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01616 note CDS Protein of unknown function DUF419 4428717:4429070 reverse MW:13764 product hypothetical protein 1756323 1755271 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01617 product CDS transcriptional regulator, LacI family:4428640 forward MW:37502 1756462 1757385 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01618 product CDS Inosose dehydratase:4427449 reverse MW:34223 1757342 1758574 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01619 product CDS Oxidoreductase:4426506 reverse MW:42893 1759823 1758954 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01620 product CDS Oxidoreductase:4424957 forward MW:30819 1760109 1760984 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01621 product CDS Transcriptional regulator, LysR family:4423801 reverse MW:31539 1761244 1761169 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_01622 product tRNA-Gly(gcc) 1761871 1761311 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01623 product CDS CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase:4422599 forward MW:20792 1763727 1761904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01624 product CDS Excinuclease ABC subunit C:4422006 forward MW:64747 1764317 1763730 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01625 product CDS BarA-associated response regulator UvrY (= GacA = SirA):4420180 forward MW:21258 1764856 1764542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01626 product CDS Transcriptional regulator, Cro/CI family:4419368 forward MW:11215 1764986 1765231 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01627 product CDS: hypothetical protein 4418679:4418924 reverse MW:8839 1765446 1765592 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01628 product hypothetical protein 1765550 1765667 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01629 product P15 1765933 1767015 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01630 product CDS 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha:4417977 reverse MW:38762 1767096 1767377 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01631 product CDS Peptidyl-prolyl cis-trans isomerase ppiC:4416814 reverse MW:9944 1767605 1769473 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01632 product CDS ABC transporter, periplasmic substrate-binding protein:4416305 reverse MW:70175 1767605 1767679 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 1769474 1770538 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01633 product CDS Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1):4414436 reverse MW:38719 1770538 1771560 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01634 product CDS Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1):4413372 reverse MW:38034 1771562 1773139 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01635 product CDS Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1):4412348 reverse MW:58196 1774487 1773318 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01636 product CDS Twitching motility protein PilT:4410592 forward MW:42683 1774642 1774917 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01637 product CDS Peptidyl-prolyl cis-trans isomerase ppiC:4409268 reverse MW:10126 1776638 1774992 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01638 product CDS Phosphoglucomutase:4408918 forward MW:59031 1779024 1776739 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01639 product CDS DinG family ATP-dependent helicase 4404886:4407171 forward MW:85056 1780578 1779172 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01640 product CDS Transcriptional regulator, GntR family domain / Aspartate aminotransferase:4404738 forward MW:52884 1782083 1780581 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01641 note CDS Conserved domain protein 4401827:4403329 forward MW:55667 product hypothetical protein 1783683 1782661 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01642 product CDS Alcohol dehydrogenase, zinc-containing:4401249 forward MW:36942 1783994 1784908 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01643 product CDS Transcriptional regulator MexT:4399916 reverse MW:33557 1785279 1786895 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01644 product CDS hypothetical protein:4398631 reverse MW:60150 1786897 1789041 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01645 note CDS Helicase conserved C-terminal domain protein 4394869:4397013 reverse MW:81500 product hypothetical protein 1789165 1790121 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01646 product CDS DNA methylase, putative:4394745 reverse MW:37513 1792526 1790376 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01647 product CDS Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1):4393534 forward MW:79656 1793528 1792686 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01648 product CDS hypothetical protein:4391224 forward MW:31217 1793925 1793545 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01649 product hypothetical protein 1794106 1794774 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01650 product CDS hypothetical protein:4389804 reverse MW:25568 1794902 1795015 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01651 product CDS hypothetical protein:4389008 reverse MW:4254 1795093 1797441 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01652 product CDS Putative ATP binding protein SugR:4388817 reverse MW:88446 1797445 1798542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01653 product CDS hypothetical protein:4386465 reverse MW:40594 1799248 1799451 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01654 product hypothetical protein 1799495 1800517 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01655 product CDS ISPsy4, transposase:6120546 reverse MW:37529 1800514 1801323 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01656 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 1801390 1803105 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01657 product CDS hypothetical protein:4100576 forward MW:65886 1803349 1803732 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01658 product hypothetical protein 1803716 1803844 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01659 product hypothetical protein 1803844 1804041 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01660 product CDS hypothetical protein:4101512 forward MW:7367 1806197 1804194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01661 product CDS Transcriptional activator of acetoin dehydrogenase operon AcoR:4103653 reverse MW:72571 1806383 1807405 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01662 product CDS Myo-inositol 2-dehydrogenase:4104876 forward MW:36122 1807402 1808190 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01663 product CDS Hydroxypyruvate isomerase:4105661 forward MW:28204 1808290 1809216 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01664 product CDS Inositol transport system sugar-binding protein:4106687 forward MW:33456 1808290 1808355 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 1810679 1809708 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01665 product CDS Transcriptional regulator, AraC family:4108150 reverse MW:36182 1810921 1811454 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01666 product CDS 2,4'-dihydroxyacetophenone dioxygenase:4108925 forward MW:20444 1811478 1812719 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01667 product CDS Major facilitator family transporter:4110190 forward MW:44231 1812712 1813311 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01668 product CDS Carbohydrate-selective porin, OprB family superfamily:4110782 forward MW:20163 1813357 1814088 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01669 product CDS oxidoreductase, short chain dehydrogenase/reductase family:4111559 forward MW:25287 1815375 1814341 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01670 product CDS transcriptional regulator, AraC family:4112846 reverse MW:37858 1816757 1815405 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01671 product CDS MmgE/PrpD family protein:4114228 reverse MW:47999 1817856 1816834 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01672 product CDS L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1):4115327 reverse MW:37513 1817856 1817764 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 1818886 1817921 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01673 product CDS L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1):4116357 reverse MW:34573 1819973 1818936 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01674 product CDS L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1):4117444 reverse MW:37940 1820398 1821351 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01675 product CDS Glycine cleavage system transcriptional activator:4118822 forward MW:35552 1821754 1823004 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01676 product CDS Benzoate 1,2-dioxygenase:4120475 forward MW:43892 1823223 1824134 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01677 product CDS Dihydrodipicolinate synthase:4121605 forward MW:31994 1824127 1825644 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01678 product CDS Aldehyde dehydrogenase:4123115 forward MW:54675 1825641 1826987 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01679 product CDS Oxidoreductase:4124458 forward MW:48350 1827501 1827070 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01680 product hypothetical protein 1827771 1828463 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01681 product CDS: hypothetical protein 4125242:4125934 forward MW:25316 1829747 1828560 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01682 product CDS major facilitator family transporter:4127218 reverse MW:41481 1829874 1830500 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01683 product CDS Transcriptional regulator, TetR family:4127971 forward MW:22432 1830568 1831023 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01684 product CDS acetyltransferase, GNAT family:4128494 forward MW:14495 1831098 1832957 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01685 product CDS Multidrug resistance ABC transporter ATP-binding and permease protein:4130428 forward MW:67740 1833896 1832982 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01686 product CDS Transcriptional regulator, AraC family:4131367 reverse MW:33511 1834041 1834799 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01687 product CDS oxidoreductase, short chain dehydrogenase/reductase family:4132270 forward MW:30121 1835803 1834823 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01688 product CDS transcriptional regulator, AraC family:4133277 reverse MW:36103 1835994 1837178 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01689 product CDS oxidoreductase, aldo/keto reductase family:4134649 forward MW:42466 1835994 1836089 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 1837312 1837893 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01690 product CDS Transcriptional regulator, TetR family:4135364 forward MW:21491 1837952 1839055 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01691 product CDS NADH:flavin oxidoreductases, Old Yellow Enzyme family:4136526 forward MW:39692 1839110 1839496 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01692 product CDS Permeases of the major facilitator superfamily:4136967 forward MW:13978 1839556 1840212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01693 product CDS oxidoreductase ylbE:4137683 forward MW:22490 1841326 1840229 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01694 product CDS NADH:flavin oxidoreductases, Old Yellow Enzyme family:4138797 reverse MW:39480 1841465 1842388 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01695 product CDS Transcriptional regulator, LysR family:4139859 forward MW:30161 1843302 1842430 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01696 product CDS ABC-type amino acid transport/signal transduction systems, periplasmic component/domain:4140773 reverse MW:31980 1843302 1843246 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 1844060 1843299 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01697 product CDS ABC-type polar amino acid transport system, ATPase component:4141531 reverse MW:28077 1844716 1844057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01698 product CDS Glutamate transport membrane-spanning protein:4142187 reverse MW:24214 1845362 1844697 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01699 product CDS Glutamate transport membrane-spanning protein:4142833 reverse MW:24109 1845661 1845822 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01700 product CDS: hypothetical protein 4143132:4143293 forward MW:5951 1845827 1846465 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01701 product CDS Predicted transcriptional regulators:4143936 forward MW:23361 1847412 1846576 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01702 product CDS: hypothetical protein 4144047:4145786 reverse MW:61961 1847755 1848480 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01703 product hypothetical protein 1848669 1850297 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01704 product CDS ABC-type dipeptide transport system, periplasmic component:4147768 forward MW:60123 1850294 1851244 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01705 product CDS Dipeptide transport system permease protein DppB (TC 3.A.1.5.2):4148715 forward MW:34052 1851249 1852166 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01706 product CDS ABC-type dipeptide/oligopeptide/nickel transport systems, permease components:4149637 forward MW:32252 1852163 1853809 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01707 product CDS Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2):4151280 forward MW:59584 1853848 1854684 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01708 product CDS: hypothetical protein 4151319:4152155 forward MW:30636 1853848 1853913 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 1854831 1855334 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01709 product CDS membrane protein, putative:4152805 forward MW:18859 1855807 1856139 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01710 product CDS lipoprotein, putative:4153610 forward MW:12635 1856603 1856292 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01711 product CDS hypothetical protein:4154032 reverse MW:9885 1857244 1856600 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01712 product CDS: hypothetical protein 4154071:4154325 reverse MW:9905 1857806 1857312 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01713 product CDS Uncharacterized protein ImpD:4155277 reverse MW:17868 1858196 1858285 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01714 product C4 1858339 1858884 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01715 product CDS: hypothetical protein 4155810:4156355 forward MW:21233 1861015 1859087 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01716 product CDS Methyl-accepting chemotaxis protein:4158486 reverse MW:68708 1861317 1862561 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01717 product CDS Multidrug efflux membrane fusion protein MexE:4160032 forward MW:44337 1861317 1861409 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 1862574 1865765 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01718 product CDS Multidrug efflux transporter MexF:4163236 forward MW:115115 1865765 1867162 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01719 product CDS Outer membrane protein OprN:4164631 forward MW:25098 1865765 1865827 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 1867320 1868414 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01720 product CDS TPR domain protein:4165883 forward MW:40036 1868902 1869264 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01721 product CDS transcriptional regulator MvaT, P16 subunit, putative:4166733 forward MW:13417 1870298 1869741 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01722 product CDS: hypothetical protein 4167210:4167818 reverse MW:22163 1870298 1870224 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 1870452 1870973 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01723 product CDS Lactoylglutathione lyase:4168442 forward MW:19444 1872623 1871061 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01724 product CDS Alkyl hydroperoxide reductase protein F:4170092 reverse MW:55518 1873311 1872748 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01725 product CDS Alkyl hydroperoxide reductase protein C:4170780 reverse MW:20428 1874387 1873422 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01726 product CDS Cointegrate resolution protein S:4171856 reverse MW:36087 1874568 1875578 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01727 product CDS Cointegrate resolution protein T:4173047 forward MW:38465 1876887 1875589 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01728 product CDS Signal transduction histidine kinase:4174356 reverse MW:47893 1878309 1876951 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01729 product CDS Glutathione reductase:4175778 reverse MW:49211 1879252 1878413 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01730 product CDS UTP--glucose-1-phosphate uridylyltransferase:4176721 reverse MW:30692 1879421 1879293 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01731 product hypothetical protein 1879583 1879864 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01732 product CDS lipoprotein, putative:4177333 forward MW:9651 1879583 1879642 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 1880275 1879922 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01733 product CDS: hypothetical protein 4177391:4177744 reverse MW:12525 1880275 1880216 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 1880443 1880748 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01734 product CDS: hypothetical protein 4177912:4178217 forward MW:11416 1880745 1880945 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01735 product CDS: hypothetical protein 4178232:4178414 forward MW:6590 1881003 1881689 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01736 product CDS Alkylated DNA repair protein AlkB:4179158 forward MW:25809 1883515 1881698 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01737 product CDS glycosyl hydrolase, family 15:4180984 reverse MW:67129 1884386 1883568 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01738 product CDS Hydrolase (HAD superfamily):4181855 reverse MW:29269 1885911 1884379 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01739 product CDS Glucose-6-phosphate 1-dehydrogenase:4183380 reverse MW:56881 1886885 1885911 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01740 product CDS 6-phosphogluconate dehydrogenase, decarboxylating:4184354 reverse MW:35008 1887199 1887372 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01741 product CDS: hypothetical protein 4184668:4184841 forward MW:6499 1888001 1887510 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01742 product CDS Histone acetyltransferase HPA2:4185476 reverse MW:18232 1888619 1890208 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01743 product CDS Glycogen synthase, ADP-glucose transglucosylase:4187677 forward MW:58056 1890228 1892042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01744 product CDS Malto-oligosyltrehalose trehalohydrolase:4189511 forward MW:66293 1892032 1894110 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01745 product CDS 4-alpha-glucanotransferase (amylomaltase):4191579 forward MW:75904 1894107 1896890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01746 product CDS Malto-oligosyltrehalose synthase:4194359 forward MW:104744 1896908 1897321 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01747 product CDS: hypothetical protein 4194377:4194790 forward MW:14244 1897481 1899664 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01748 product CDS Glycogen debranching enzyme:4197133 forward MW:81972 1899661 1900674 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01749 product CDS Acyl-CoA dehydrogenase/oxidase domain protein:4198143 forward MW:36237 1900701 1901474 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01750 product CDS LmbE-like protein:4198943 forward MW:27677 1901471 1902097 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01751 product CDS Methyltransferase type 12:4199566 forward MW:23731 1902066 1902719 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01752 product CDS Glycosyl transferase, group 2 family protein:4200188 forward MW:23264 1903794 1902754 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01753 product CDS Probable lipoprotein signal peptide:4201263 reverse MW:37294 1903794 1903723 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1904750 1904142 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01754 product CDS FMN-dependent NADH-azoreductase:4202219 reverse MW:21484 1905784 1904825 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01755 product CDS Transcriptional regulator, LysR family:4203253 reverse MW:35004 1906655 1905864 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01756 product CDS Beta-ketoadipate enol-lactone hydrolase:4204124 reverse MW:27978 1906783 1907127 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01757 product CDS: hypothetical protein 4204252:4204596 forward MW:13013 1907592 1907122 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01758 product CDS Cold-shock DNA-binding domain:4205061 reverse MW:17598 1908419 1907589 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01759 product CDS Undecaprenyl-diphosphatase:4205888 reverse MW:30524 1908699 1909262 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01760 product CDS Ribosyl nicotinamide transporter, PnuC-like:4206731 forward MW:21025 1909259 1909795 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01761 product CDS Ribosylnicotinamide kinase:4207264 forward MW:19984 1911149 1909845 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01762 product CDS sigma-54 dependent transcriptional regulator:4208618 reverse MW:48563 1911478 1911744 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01763 product CDS: hypothetical protein 4208947:4209213 forward MW:9838 1913428 1912406 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01764 product hypothetical protein 1914851 1914288 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01765 product CDS ChlD component of cobalt chelatase involved in B12 biosynthesis:3468340 reverse MW:20701 1915981 1914953 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01766 product CDS ChlI component of cobalt chelatase involved in B12 biosynthesis:3469470 reverse MW:37030 1919745 1915981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01767 product CDS CobN component of cobalt chelatase involved in B12 biosynthesis:3473234 reverse MW:139163 1920813 1919749 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01768 product CDS CobW GTPase involved in cobalt insertion for B12 biosynthesis:3474347 reverse MW:40161 1921151 1920927 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01769 product Cobalamin 1921210 1921424 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01770 product Cobalamin 1921520 1921705 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01771 product CDS: hypothetical protein 3475009:3475194 forward MW:6260 1921726 1922448 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01772 product CDS Predicted cobalt transporter CbtA:3475937 forward MW:25716 1922441 1922890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01773 product CDS Cobalamin biosynthesis protein CobE:3476379 forward MW:12370 1922923 1923672 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01774 product CDS Cobalt-precorrin-4 C11-methyltransferase:3477161 forward MW:26860 1927324 1923842 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01775 product CDS Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits:3480813 reverse MW:128033 1927510 1927977 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01776 product CDS Transcriptional regulator, AsnC family:3481466 forward MW:17640 1928073 1928219 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01777 product PrrF 1928489 1929022 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01778 product CDS DNA-directed RNA polymerase specialized sigma subunit, sigma24-like:3482511 forward MW:20170 1929144 1930280 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01779 product CDS Zinc carboxypeptidase domain protein:3483769 forward MW:42396 1931558 1930314 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01780 product CDS Permeases of the major facilitator superfamily:3485047 reverse MW:43363 1931665 1932210 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01781 product CDS Transcriptional regulator, TetR family:3485699 forward MW:19862 1932287 1933591 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01782 product CDS Serine/threonine protein kinase:3487080 forward MW:48861 1934314 1933610 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01783 product CDS: hypothetical protein 3487099:3487803 reverse MW:25244 1935289 1934516 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01784 product CDS Enoyl-CoA hydratase [valine degradation]:3488778 reverse MW:27821 1936580 1935372 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01785 product CDS Acetyl-CoA C-acyltransferase @ Acetyl-CoA acetyltransferase (EC 2.3.1.9):3490168 reverse MW:45513 1936756 1937235 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01786 product CDS lipoprotein, putative:3490724 forward MW:16907 1936756 1936824 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 1937384 1938283 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01787 product CDS Ribosomal protein S16:3491772 forward MW:34684 1938665 1938309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01788 product CDS: hypothetical protein 3491798:3492154 reverse MW:12871 1939172 1939426 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01789 product CDS: hypothetical protein 3492673:3492915 forward MW:8102 1939172 1939243 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 1939471 1942164 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01790 product CDS Beta-glucosidase:3495653 forward MW:96601 1939471 1939548 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 1942830 1942180 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01791 product CDS Transcriptional regulator, TetR family:3496319 reverse MW:24201 1944214 1942853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01792 product CDS MATE efflux family protein:3497703 reverse MW:47980 1944572 1944318 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01793 product CDS: hypothetical protein 3497807:3498061 reverse MW:9712 1944726 1945043 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01794 product CDS Probable transmembrane protein:3498532 forward MW:11310 1945506 1945156 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01795 product CDS: hypothetical protein 3498645:3498995 reverse MW:12708 1945776 1946846 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01796 product CDS Metalloprotease:3500335 forward MW:38597 1946878 1947177 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01797 product CDS: hypothetical protein 3500367:3500666 forward MW:10927 1947431 1948069 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01798 product CDS Paraquat-inducible protein A:3501558 forward MW:22897 1948066 1948680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01799 product CDS Paraquat-inducible protein A:3502169 forward MW:23191 1948673 1950352 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01800 product CDS Paraquat-inducible protein B:3503841 forward MW:59362 1950349 1950972 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01801 product CDS ortholog of Bordetella pertussis (BX470248) 3503838:3504461 forward MW:22172 1950349 1950429 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 1951251 1951700 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01802 product CDS Transcriptional regulator, Cro/CI family:3505189 forward MW:13380 1952639 1951728 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01803 product CDS Transcriptional regulator:3506128 reverse MW:33218 1952751 1953587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01804 product CDS Pirin-related protein:3507076 forward MW:29679 1954463 1953600 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01805 product CDS Aldo-keto reductase:3507952 reverse MW:30635 1954603 1955511 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01806 product CDS Transcriptional regulator:3509000 forward MW:33350 1957065 1955536 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01807 product CDS sodium:solute symporter family protein:3510554 reverse MW:54729 1957322 1957062 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01808 product CDS: hypothetical protein 3510551:3510811 reverse MW:9449 1958381 1957446 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01809 product CDS Choline kinase:3511870 reverse MW:35331 1959331 1958378 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01810 product CDS Choline kinase:3512820 reverse MW:35537 1960621 1959341 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01811 product CDS Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase:3514110 reverse MW:45620 1961462 1960599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01812 product CDS Glycerol-3-phosphate regulon repressor:3514846 reverse MW:28306 1962853 1961426 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01813 product CDS putative amidase:3516342 reverse MW:50473 1964755 1963148 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01814 product CDS RTX toxins+-binding proteins:3518244 reverse MW:56699 1965254 1966570 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01815 product CDS Sensor histidine kinase/GAF domain hybrid protein:3520059 forward MW:47713 1967681 1966767 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01816 product CDS Transcriptional regulator, LysR family:3521170 reverse MW:33963 1967842 1969398 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01817 product CDS Permeases of the major facilitator superfamily:3522887 forward MW:51966 1969395 1970381 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01818 product CDS bacterial luciferase family protein:3523870 forward MW:36643 1970475 1971668 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01819 product CDS Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-dependent oxidoreductases:3525157 forward MW:44208 1972590 1971718 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01820 product CDS: hypothetical protein 3525207:3526079 reverse MW:32076 1973366 1972587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01821 product CDS: hypothetical protein 3526076:3526855 reverse MW:28073 1974469 1973453 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01822 product CDS Oxidoreductase, 2-nitropropane dioxygenase family:3527913 reverse MW:34309 1974867 1974505 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01823 product CDS: hypothetical protein 3527994:3528356 reverse MW:13874 1975660 1974947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01824 product CDS Demethylmenaquinone methyltransferase:3529149 reverse MW:25448 1976834 1975644 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01825 product CDS Protein dlpA:3530323 reverse MW:43186 1977859 1976831 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01826 product CDS 4-hydroxy-2-oxovalerate aldolase:3531399 reverse MW:38908 1979042 1978134 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01827 product CDS transcriptional regulator, LysR family:3532447 reverse MW:30187 1980156 1979557 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01828 product hypothetical protein 1981078 1980488 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01829 product hypothetical protein 2001147 1982929 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01830 product CDS Unknown, probable hemolysin/adhesin:3554636 reverse MW:616871 2002897 2001188 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01831 product CDS Hemolysin activator protein precursor:3556290 reverse MW:60060 2002897 2002826 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 2003118 2003993 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01832 product CDS Transcriptional regulator:3557482 forward MW:31983 2004456 2004031 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01833 product CDS probable dioxygenase:3557945 reverse MW:16051 2005903 2004662 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01834 product CDS Glutamate carboxypeptidase:3559392 reverse MW:43748 2005903 2005817 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 2007475 2005988 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01835 product CDS Sulfate permease:3561099 reverse MW:57692 2007898 2009307 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01836 product CDS Transcriptional regulator, GntR family domain / Aspartate aminotransferase:3562796 forward MW:51726 2009784 2009709 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_01837 product tRNA-Asn(gtt) 2010171 2012168 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01838 product CDS Methyl-accepting chemotaxis protein:3565657 forward MW:71193 2013060 2012224 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01839 product CDS Ferric siderophore transport system, periplasmic binding protein TonB:3566549 reverse MW:30709 2013503 2013057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01840 product CDS Tol biopolymer transport system, TolR protein:3566992 reverse MW:16199 2014223 2013513 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01841 product CDS MotA/TolQ/ExbB proton channel family protein:3567712 reverse MW:25588 2016200 2014278 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01842 product CDS 3-phytase precursor:3569689 reverse MW:68781 2016200 2016123 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 2018753 2016237 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01843 product CDS TonB-dependent receptor, in a cluster with 3-phytase:3572242 reverse MW:92486 2018753 2018664 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 2019233 2020147 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01844 product CDS Signaling protein with membrane-bound sensor domain and GGDEF domain:3573636 forward MW:34352 2020157 2021194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01845 product CDS Transcriptional regulator, AraC family:3574683 forward MW:39068 2021876 2021202 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01846 product CDS Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain:3575365 reverse MW:25179 2022686 2021988 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01847 product CDS Phosphohistidine phosphatase SixA:3576175 reverse MW:25540 2023255 2024409 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01848 product CDS mandelate racemase/muconate lactonizing enzyme family protein:3577898 forward MW:42394 2024495 2026117 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01849 product CDS Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2):3579606 forward MW:59958 2024495 2024581 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 2026158 2027195 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01850 product CDS Dipeptide transport system permease protein DppB (TC 3.A.1.5.2):3580684 forward MW:37607 2027195 2028100 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01851 product CDS Dipeptide transport system permease protein DppC (TC 3.A.1.5.2):3581589 forward MW:32148 2028163 2029002 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01852 product CDS Putative glutathione transporter, ATP-binding component:3582491 forward MW:31286 2029013 2029777 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01853 product CDS Putative glutathione transporter, ATP-binding component:3583266 forward MW:28216 2029913 2030635 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01854 product CDS Oligogalacturonate-specific porin:3584124 forward MW:28279 2029913 2029978 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2031587 2030853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01855 product CDS Transcriptional regulator, GntR family:3585076 reverse MW:26823 2031696 2032412 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01856 product CDS Predicted D-glucarate or D-galactorate regulator, GntR family:3585901 forward MW:26366 2032432 2032630 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_01857 product Cobalamin 2032760 2033773 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01858 product CDS ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component:3587262 forward MW:37176 2032760 2032825 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2033770 2034792 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01859 product CDS ABC transporter (iron.B12.siderophore.hemin) , permease component:3588281 forward MW:34424 2034789 2035580 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01860 product CDS ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component:3589069 forward MW:28384 2035687 2037693 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01861 product CDS Putative collagenase:3591182 forward MW:74464 2038417 2037740 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01862 product CDS acetyltransferase, GNAT family:3591723 reverse MW:18498 2038750 2038505 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01863 product CDS hypothetical protein:3592161 reverse MW:5994 2038967 2041528 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01864 product CDS Nitrite reductase [NAD(P)H] large subunit:3595017 forward MW:92596 2041528 2041914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01865 product CDS Nitrite reductase [NAD(P)H] small subunit:3595403 forward MW:14335 2042970 2041972 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01866 product CDS hydrolase, alpha/beta fold family:3596459 reverse MW:36752 2042970 2042905 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2043358 2044287 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01867 product CDS Transcriptional regulator, LysR family:3597776 forward MW:34153 2045067 2044288 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01868 product CDS Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1):3598556 reverse MW:29333 2045951 2045067 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01869 product CDS Phosphate transport system permease protein PstA (TC 3.A.1.7.1):3599440 reverse MW:31588 2046943 2045948 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01870 product CDS Phosphate transport system permease protein PstC (TC 3.A.1.7.1):3600432 reverse MW:35722 2048050 2047025 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01871 product CDS Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1):3601539 reverse MW:36647 2048050 2047976 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 2048547 2048831 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01872 product CDS: hypothetical protein 3602036:3602320 forward MW:9985 2048547 2048621 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 2048953 2049261 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01873 product CDS: hypothetical protein 3602442:3602750 forward MW:10157 2048953 2049027 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 2050967 2049237 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01874 product CDS Hypothetical protein, restriction endonuclease-like VRR-NUC domain:3604432 reverse MW:65419 2051099 2051599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01875 product CDS Nucleoside 2-deoxyribosyltransferase:3605088 forward MW:18291 2053067 2052045 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01876 product hypothetical protein 2054398 2053496 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01877 product CDS Transcriptional regulator, LysR family:3859611 forward MW:33218 2054505 2055590 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01878 product CDS Putative transport protein:3858602 reverse MW:37861 2056862 2055618 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01879 product CDS N-acylglucosamine 2-epimerase:3857489 forward MW:46007 2058611 2056986 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01880 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):3856121 forward MW:58402 2059931 2058792 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01881 product CDS Glycerate kinase:3854315 forward MW:39189 2061133 2060042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01882 product CDS Sugar diacid utilization regulator SdaR:3853065 forward MW:41018 2061302 2062453 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01883 product CDS Lysophospholipase:3851805 reverse MW:43713 2061302 2061370 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2063178 2062465 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01884 product CDS Transcriptional regulator, GntR family:3850642 forward MW:26234 2063627 2064973 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01885 product CDS Major facilitator family transporter:3849459 reverse MW:48025 2065025 2066377 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01886 product CDS Glucarate dehydratase:3848082 reverse MW:49455 2066521 2067174 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01887 product CDS Probable transmembrane protein:3846586 reverse MW:23806 2067207 2068163 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01888 product CDS D-3-phosphoglycerate dehydrogenase:3845900 reverse MW:34530 2068687 2068358 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01889 product CDS: hypothetical protein 3844420:3844749 forward MW:12112 2068687 2068622 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2068927 2069151 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01890 product CDS: hypothetical protein 3843956:3844180 reverse MW:8251 2068927 2068998 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 2069482 2070807 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01891 product CDS Outer membrane porin, OprD family:3843625 reverse MW:49023 2069482 2069559 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 2072730 2071102 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01892 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):3842005 forward MW:58529 2073332 2074546 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01893 product CDS type III effector HopAH1:3839775 reverse MW:42162 2074997 2076247 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01894 product CDS: hypothetical protein 3836860:3838110 reverse MW:43929 2078495 2076360 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01895 product CDS Ferrichrome-iron receptor:3836747 forward MW:77766 2078495 2078433 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 2078692 2079342 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01896 product CDS Nicotinamidase:3834415 reverse MW:23495 2079477 2080412 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01897 product CDS transporter, putative:3833630 reverse MW:34044 2080499 2081182 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01898 product CDS DNA-binding response regulator:3832608 reverse MW:25092 2081160 2082557 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01899 product CDS sensor histidine kinase:3831896 reverse MW:49426 2082978 2083904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01900 product CDS (R)-3-hydroxydecanoyl-ACP:CoA transacylase:3830129 reverse MW:34480 2084003 2085190 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01901 product CDS Membrane-fusion protein:3829092 reverse MW:42015 2085187 2086287 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01902 product CDS Efflux membrane fusion protein, RND family:3827920 reverse MW:39903 2086284 2089322 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01903 product CDS AcrB/AcrD/AcrF family protein:3826823 reverse MW:110779 2090013 2089363 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01904 product CDS: hypothetical protein 3823094:3823744 forward MW:24323 2091358 2090000 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01905 product CDS ATP binding protein:3823107 forward MW:50370 2091605 2092801 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01906 product CDS major facilitator family transporter:3821463 reverse MW:40811 2093026 2093772 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01907 product CDS: hypothetical protein 3819335:3820081 reverse MW:27715 2094545 2093823 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01908 product CDS phospholipase/carboxylesterase family protein:3819284 forward MW:26098 2094545 2094489 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 2096948 2094621 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01909 product CDS General secretion pathway protein D:3818486 forward MW:82309 2097475 2096948 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01910 product CDS General secretion pathway protein N:3816159 forward MW:18767 2098083 2097472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01911 product CDS General secretion pathway protein M:3815635 forward MW:22423 2099128 2098058 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01912 product CDS General secretion pathway protein L:3815049 forward MW:39459 2099859 2099125 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01913 product CDS General secretion pathway protein K:3813982 forward MW:26332 2100488 2099856 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01914 product CDS General secretion pathway protein J:3813251 forward MW:22573 2100868 2100485 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01915 product CDS General secretion pathway protein I:3812622 forward MW:13450 2101302 2100868 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01916 product CDS General secretion pathway protein H:3812239 forward MW:14331 2101742 2101311 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01917 product CDS General secretion pathway protein G:3811796 forward MW:15382 2102970 2101768 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01918 product CDS General secretion pathway protein F:3811339 forward MW:42709 2104724 2102967 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01919 product CDS General secretion pathway protein E:3810140 forward MW:61421 2105002 2104775 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01920 product CDS: hypothetical protein 3808104:3808340 forward MW:8106 2105002 2104934 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2105366 2108239 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01921 product CDS Beta-glucosidase:3807593 reverse MW:98278 2108923 2108279 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01922 product CDS Transcriptional regulator, TetR family:3804827 forward MW:23713 2109437 2108982 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01923 product CDS: hypothetical protein 3803669:3804124 forward MW:16539 2110017 2109478 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01924 product CDS phosphinothricin N-acetyltransferase:3803628 forward MW:18089 2110087 2111013 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01925 product CDS Transcriptional regulator:3803076 reverse MW:35710 2111292 2112875 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01926 product CDS D-Glucuronolactone:NAD+ oxidoreductase:3801814 reverse MW:55596 2113246 2113028 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_01927 product hypothetical protein 2113540 2114715 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01928 product CDS sarcosine oxidase:3799500 reverse MW:40322 2116086 2114716 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01929 product CDS ABC-type protease exporter, outer membrane component PrtF/AprF:3798390 forward MW:50942 2116086 2116012 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 2117425 2116088 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01930 product CDS ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE:3797018 forward MW:48716 2119221 2117422 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01931 product CDS ABC-type protease exporter, ATP-binding component PrtD/AprD:3795684 forward MW:64159 2119613 2119302 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01932 product CDS Alkaline proteinase inhibitor precursor:3793804 forward MW:13796 2121172 2119745 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01933 product CDS Secreted alkaline metalloproteinase , PrtA/B/C/G:3793361 forward MW:49273 2122320 2121649 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01934 product CDS Putative TEGT family carrier/transport protein:3791457 forward MW:24289 2122442 2122529 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_01935 product tRNA-Ser(tga) 2122686 2123594 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01936 product CDS LysR family transcriptional regulator YbhD:3790420 reverse MW:33406 2124359 2123580 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01937 product CDS Hypothetical ABC transport system, periplasmic component:3789526 forward MW:27358 2124359 2124282 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 2125676 2124375 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01938 product CDS metabolite/H symporter, major facilitator superfamily (MFS):3788731 forward MW:44940 2125960 2126547 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01939 product CDS: hypothetical protein 3786559:3787146 reverse MW:21639 2126670 2127062 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01940 product CDS tRNA 5-methylaminomethyl-2-thiouridine synthase TusD:3786583 reverse MW:19785 2127064 2127426 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01941 product CDS tRNA 5-methylaminomethyl-2-thiouridine synthase TusC:3786027 reverse MW:12333 2127426 2127725 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01942 product CDS tRNA 5-methylaminomethyl-2-thiouridine synthase TusB:3785680 reverse MW:10893 2127722 2128057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01943 product CDS tRNA 2-thiouridine synthesizing protein E:3785384 reverse MW:12252 2128054 2129055 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01944 product CDS Anthranilate phosphoribosyltransferase like:3785052 reverse MW:37047 2129164 2130162 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01945 product CDS Glutathione S-transferase, omega:3783942 reverse MW:38007 2131608 2130214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01946 product CDS Siroheme synthase / Precorrin-2 oxidase / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107):3782892 forward MW:49941 2132889 2131609 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01947 product CDS Seryl-tRNA synthetase:3781497 forward MW:47230 2133280 2132906 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01948 product CDS Protein crcB:3780200 forward MW:13034 2134602 2133280 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01949 product CDS ATPase, AAA family:3779826 forward MW:48842 2135243 2134620 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01950 product CDS Outer membrane lipoprotein carrier protein LolA:3778486 forward MW:22849 2135243 2135178 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2137725 2135320 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01951 product CDS Cell division protein FtsK:3777268 forward MW:69216 2138203 2138892 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01952 product CDS Leucyl/phenylalanyl-tRNA--protein transferase:3774904 reverse MW:26171 2138953 2139660 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01953 product CDS Leucyl/phenylalanyl-tRNA--protein transferase:3774154 reverse MW:27796 2139762 2139980 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01954 product CDS Translation initiation factor 1:3773345 reverse MW:8302 2142370 2140097 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01955 product CDS ATP-dependent Clp protease ATP-binding subunit ClpA:3773010 forward MW:83606 2142763 2142401 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01956 product CDS ATP-dependent Clp protease adaptor protein ClpS:3770706 forward MW:13484 2142984 2143253 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01957 product CDS Cold shock protein CspD:3770123 reverse MW:9742 2143887 2146118 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01958 product CDS Isocitrate dehydrogenase [NADP] ; Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42):3769220 reverse MW:80829 2146244 2146690 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01959 product CDS Nudix-like NDP and NTP phosphohydrolase YmfB:3766863 reverse MW:16868 2146751 2147881 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01960 product CDS tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase:3766326 reverse MW:40947 2147881 2148501 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01961 product CDS: a protein of unknown function perhaps involved in purine metabolism 3764606:3765226 reverse MW:22954 2148633 2150003 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01962 product CDS Adenylosuccinate lyase:3764474 reverse MW:50884 2150064 2151230 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01963 product CDS: hypothetical protein 3761877:3763043 reverse MW:43859 2151223 2151654 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01964 product CDS GNAT family acetyltransferase YjcF:3761884 reverse MW:16033 2151832 2152578 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01965 product CDS Type II and III secretion system family protein:3761281 reverse MW:26810 2151832 2151906 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 2152856 2154181 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01966 product CDS Isocitrate lyase:3760252 reverse MW:48682 2154656 2155069 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01967 product CDS NADH ubiquinone oxidoreductase chain A:3758452 reverse MW:15143 2155080 2155754 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01968 product CDS NADH-ubiquinone oxidoreductase chain B:3758028 reverse MW:25454 2155829 2157610 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01969 product CDS NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3):3757279 reverse MW:67798 2157613 2158110 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01970 product CDS NADH-ubiquinone oxidoreductase chain E:3755495 reverse MW:17975 2158107 2159465 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01971 product CDS NADH-ubiquinone oxidoreductase chain F:3755001 reverse MW:48789 2159603 2162320 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01972 product CDS NADH-ubiquinone oxidoreductase chain G:3753505 reverse MW:98335 2162317 2163324 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01973 product CDS NADH-ubiquinone oxidoreductase chain H:3750791 reverse MW:37443 2163336 2163884 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01974 product CDS NADH-ubiquinone oxidoreductase chain I:3749772 reverse MW:20506 2163895 2164404 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01975 product CDS NADH-ubiquinone oxidoreductase chain J:3749213 reverse MW:17950 2164401 2164709 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01976 product CDS NADH-ubiquinone oxidoreductase chain K:3748707 reverse MW:10988 2164706 2166559 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01977 product CDS NADH-ubiquinone oxidoreductase chain L:3748402 reverse MW:66503 2166599 2168131 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01978 product CDS NADH-ubiquinone oxidoreductase chain M:3746509 reverse MW:55581 2168139 2169608 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01979 product CDS NADH-ubiquinone oxidoreductase chain N:3744969 reverse MW:51871 2170728 2169664 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01980 product CDS membrane protein, putative:3743444 forward MW:38905 2172553 2170874 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01981 product CDS Methyl-accepting chemotaxis protein:3742234 forward MW:59437 2173999 2172680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01982 product CDS Sensor protein PhoQ:3740428 forward MW:48949 2174664 2173996 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01983 product CDS DNA-binding response regulator:3739112 forward MW:24641 2174969 2174664 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01984 product CDS lipoprotein, putative:3738444 forward MW:11555 2174969 2174901 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2175277 2174969 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01985 product CDS: hypothetical protein 3737831:3738139 forward MW:11260 2175277 2175209 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2176116 2176007 rRNA locus_tag NYT1canu_01986 product 5S ribosomal RNA score 2.4e-13 2179167 2176278 rRNA locus_tag NYT1canu_01987 product 23S ribosomal RNA score 0 2179488 2179413 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_01988 product tRNA-Ala(tgc) 2179609 2179533 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_01989 product tRNA-Ile(gat) 2181240 2179707 rRNA locus_tag NYT1canu_01990 product 16S ribosomal RNA score 0 2181901 2182788 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01991 product CDS: hypothetical protein 5228279:5229166 reverse MW:30571 2182954 2183268 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01992 product CDS lipoprotein, putative:5228113 reverse MW:11076 2182954 2183007 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 18 product putative signal peptide 2185102 2183294 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01993 product CDS Xaa-Pro aminopeptidase:5227773 forward MW:66097 2186341 2185160 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01994 product CDS Cysteine desulfurase:5225907 forward MW:41619 2186922 2188043 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01995 product CDS Aminotransferase, DegT/DnrJ/EryC1/StrS family:5224145 reverse MW:41389 2188043 2189563 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01996 product CDS Polysaccharide biosynthesis domain protein:5223036 reverse MW:55917 2189567 2190502 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01997 product CDS Glycosyltransferase:5221500 reverse MW:35166 2190492 2190959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01998 product CDS Low molecular weight protein-tyrosine-phosphatase Wzb:5220575 reverse MW:17245 2190492 2190557 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2190960 2193221 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_01999 product CDS Tyrosine-protein kinase Wzc:5220107 reverse MW:83697 2193273 2193785 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02000 product CDS Transcriptional activator RfaH:5217794 reverse MW:19593 2193874 2194875 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02001 product CDS Glycosyl transferase, group 2 family protein:5217193 reverse MW:37590 2194872 2196110 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02002 product CDS glycosyl transferase, group 1 family protein:5216195 reverse MW:46261 2196186 2197295 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02003 product CDS Glycosyl transferase, group 1:5214881 reverse MW:41207 2197366 2197725 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02004 product CDS Glycosyltransferase:5213701 reverse MW:13315 2197729 2198595 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02005 product CDS Glycosyltransferase:5213338 reverse MW:31539 2198608 2200017 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02006 product CDS capsular polysaccharide biosynthesis protein:5212459 reverse MW:53527 2200123 2201217 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02007 product CDS Capsule polysaccharide export protein:5210944 reverse MW:39486 2200123 2200188 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2201465 2202046 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02008 product CDS FMN reductase:5209548 reverse MW:19275 2202665 2202057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02009 product CDS Transporter, LysE family:5209010 forward MW:21904 2203064 2202789 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02010 product CDS lipoprotein, putative:5208278 forward MW:10186 2203064 2202990 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 2204043 2203153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02011 product CDS LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase:5207914 forward MW:32541 2204173 2204874 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02012 product CDS Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A:5206894 reverse MW:25238 2204920 2205576 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02013 product CDS Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B:5206147 reverse MW:23186 2206020 2207438 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02014 product CDS Short chain fatty acids transporter:5205047 reverse MW:50754 2207770 2207441 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02015 product CDS: hypothetical protein 5203297:5203626 forward MW:12189 2208501 2207767 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02016 product CDS CTP synthase:5203300 forward MW:26190 2209542 2208610 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02017 product CDS D-3-phosphoglycerate dehydrogenase:5202457 forward MW:32772 2209762 2210919 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02018 product CDS Glycerophosphoryl diester phosphodiesterase, periplasmic:5201305 reverse MW:42176 2209762 2209872 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 37 product putative signal peptide 2213150 2210964 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02019 product CDS Ferrichrome-iron receptor:5200103 forward MW:78478 2213150 2213073 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 2213392 2214735 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02020 product CDS CDP-diacylglycerol--serine O-phosphatidyltransferase:5197675 reverse MW:50938 2217364 2214809 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02021 product CDS ATP-dependent DNA ligase clustered with Ku protein, LigD:5196258 forward MW:94311 2218300 2217401 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02022 product CDS Ku domain protein:5193666 forward MW:33486 2218701 2219840 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02023 product CDS Alkanesulfonate monooxygenase:5192366 reverse MW:41552 2219840 2220946 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02024 product CDS Transcriptional regulator clustered with alkanesulfonate monooxygenase:5191227 reverse MW:41392 2222656 2221253 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02025 product CDS: hypothetical protein 5188411:5189814 forward MW:51035 2223288 2222719 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02026 product CDS Transcriptional regulator, Cro/CI family:5188348 forward MW:20974 2223410 2224348 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02027 product CDS Permease of the drug/metabolite transporter (DMT) superfamily:5187657 reverse MW:32882 2224508 2227426 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02028 product CDS Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B:5186502 reverse MW:103730 2227426 2227770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02029 product CDS Na(+) H(+) antiporter subunit C:5183641 reverse MW:12273 2227767 2229452 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02030 product CDS Na(+) H(+) antiporter subunit D:5183300 reverse MW:59987 2229449 2229937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02031 product CDS Na(+) H(+) antiporter subunit E:5181618 reverse MW:18177 2229934 2230212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02032 product CDS Na(+) H(+) antiporter subunit F:5181133 reverse MW:10146 2230209 2230589 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02033 product CDS Na(+) H(+) antiporter subunit G:5180858 reverse MW:13372 2231078 2230611 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02034 product CDS: hypothetical protein 5180019:5180456 forward MW:16132 2231523 2231762 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02035 product CDS: hypothetical protein 5179305:5179544 reverse MW:9089 2233267 2231783 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02036 note CDS Conserved domain protein 5177800:5179284 forward MW:54129 product hypothetical protein 2235144 2233561 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02037 product CDS Methyl-accepting chemotaxis protein:5177506 forward MW:57735 2235747 2235343 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02038 product CDS C4-type zinc finger protein, DksA/TraR family:5175724 forward MW:15401 2237076 2236051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02039 product CDS Inositol transport system permease protein:5175016 forward MW:35523 2238698 2237121 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02040 product CDS Inositol transport system ATP-binding protein:5173946 forward MW:57309 2239697 2238768 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02041 product CDS Inositol transport system sugar-binding protein:5172299 forward MW:33016 2239697 2239626 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 2239937 2239767 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02042 product CDS: hypothetical protein 5171130:5171300 forward MW:6260 2240289 2240558 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02043 product hypothetical protein 2240658 2240927 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02044 product hypothetical protein 2242346 2241327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02045 product CDS Myo-inositol 2-dehydrogenase:2709759 forward MW:37092 2243272 2242412 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02046 product CDS Glyceraldehyde-3-phosphate ketol-isomerase:2708674 forward MW:33218 2244335 2243325 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02047 product CDS Myo-inositol 2-dehydrogenase 1:2707761 forward MW:36392 2246356 2244419 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02048 product CDS Epi-inositol hydrolase:2706667 forward MW:70192 2247250 2246420 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02049 product CDS Inosose isomerase:2704666 forward MW:29834 2248789 2247287 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02050 product CDS Methylmalonate-semialdehyde dehydrogenase [inositol]:2703799 forward MW:53743 2249627 2248818 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02051 product CDS 5-deoxy-glucuronate isomerase:2702268 forward MW:29694 2250562 2249657 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02052 product CDS Inosose dehydratase:2701429 forward MW:33016 2252570 2250633 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02053 product CDS 5-keto-2-deoxygluconokinase / uncharacterized domain:2700453 forward MW:71424 2252842 2253750 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02054 product CDS Predicted transcriptional regulator of the myo-inositol catabolic operon:2698244 reverse MW:33805 2254802 2253804 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02055 product CDS Inner membrane protein YbhQ:2697282 forward MW:37064 2256049 2254799 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02056 product CDS Cardiolipin synthetase:2696287 forward MW:46827 2256831 2256046 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02057 product CDS Endonuclease/Exonuclease/phosphatase family protein:2695040 forward MW:26525 2257054 2257593 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02058 product CDS Cytochrome b561:2694032 reverse MW:20392 2258335 2257595 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02059 product CDS 5'-methylthioadenosine phosphorylase:2693491 forward MW:26388 2259355 2258345 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02060 product CDS Beta N-acetyl-glucosaminidase:2692741 forward MW:37425 2260195 2259479 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02061 product CDS Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family:2691607 forward MW:26404 2260452 2261060 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02062 product CDS SOS-response repressor and protease LexA:2690634 reverse MW:22149 2261070 2261540 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02063 product CDS Cell division inhibitor-related protein:2690016 reverse MW:17332 2261828 2261595 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02064 product CDS: hypothetical protein 2689258:2689491 forward MW:8418 2262414 2261893 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02065 product CDS: hypothetical protein 2688672:2689193 forward MW:19395 2265146 2262537 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02066 product CDS DNA topoisomerase I:2688549 forward MW:96941 2265496 2265260 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02067 product CDS: hypothetical protein 2685590:2685826 forward MW:9142 2266776 2265601 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02068 product CDS 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase (EC 2.3.1.9):2685485 forward MW:41720 2268946 2266781 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02069 product CDS Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase(EC 5.1.2.3):2684305 forward MW:77706 2270343 2269906 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02070 product CDS: hypothetical protein 2680743:2681180 forward MW:16890 2270474 2270935 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02071 product CDS Universal stress protein family:2680612 reverse MW:16836 2272914 2271004 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02072 product CDS ABC transporter, ATP-binding protein:2680082 forward MW:70420 2273119 2275047 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02073 product CDS Soluble lytic murein transglycosylase precursor:2677967 reverse MW:73605 2273119 2273193 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 2275904 2275095 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02074 product CDS Flavodoxin reductases (ferredoxin-NADPH reductases) family 1:2675991 forward MW:29940 2276923 2275997 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02075 product CDS Chemotaxis protein CheV:2675089 forward MW:34429 2277374 2277805 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02076 product CDS: hypothetical protein 2673281:2673712 reverse MW:15717 2277951 2278613 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02077 product CDS DNA-binding response regulator, LuxR family:2673135 reverse MW:24472 2279514 2278597 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02078 product CDS Transcription regulator [contains diacylglycerol kinase catalytic domain]:2672489 forward MW:32110 2280040 2281476 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02079 product CDS capsular polysaccharide biosynthesis protein:2671046 reverse MW:54096 2281476 2282933 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02080 product CDS Mannose-1-phosphate guanylyltransferase (GDP):2669538 reverse MW:50899 2283079 2283855 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02081 product CDS Polysaccharide biosynthesis/export protein:2668007 reverse MW:27572 2283873 2285864 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02082 product CDS exopolysaccharide biosythesis protein:2667213 reverse MW:74607 2285864 2287042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02083 product CDS Glycosyl transferase, group 1 family protein:2665222 reverse MW:42947 2287044 2288357 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02084 product CDS Glycosyl hydrolase, family 5:2664042 reverse MW:48513 2287044 2287124 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 2288361 2289578 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02085 product CDS Glycosyl transferase, group 1 family protein:2662725 reverse MW:45670 2289569 2290669 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02086 product CDS Glycosyl transferase, group 1 family protein:2661517 reverse MW:41330 2290669 2292084 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02087 product CDS membrane protein, putative:2660417 reverse MW:51130 2292081 2292902 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02088 product CDS Transferase hexapeptide repeat:2659005 reverse MW:30490 2292918 2294333 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02089 product CDS Virulence factor mviN:2658168 reverse MW:49403 2295220 2294267 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02090 product CDS LysR family transcriptional regulator 2834724:2835623 reverse MW:33315 2295344 2296504 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02091 product CDS C4-dicarboxylate transporter/malic acid transport protein:2655796 reverse MW:43474 2296570 2297487 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02092 product CDS: hypothetical protein 2653599:2654516 reverse MW:33761 2297632 2297892 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02093 product CDS: hypothetical protein 2653194:2653505 reverse MW:11568 2298098 2299315 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02094 product CDS: hypothetical protein 2651771:2652988 reverse MW:44668 2298098 2298163 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2299481 2300158 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02095 product CDS ThiJ/PfpI family protein:2651605 reverse MW:23951 2300277 2300420 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02096 product CDS: hypothetical protein 2650666:2650809 reverse MW:5257 2301474 2300539 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02097 product CDS Transcriptional regulator, LysR family:2650547 forward MW:35297 2302668 2301568 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02098 product CDS Outer membrane protein romA:2649518 forward MW:41828 2302864 2303478 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02099 product CDS Transcriptional regulator, TetR family:2648222 reverse MW:23311 2304786 2303491 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02100 product CDS Fumarylacetoacetase:2647595 forward MW:46211 2306090 2304786 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02101 product CDS Homogentisate 1,2-dioxygenase:2646300 forward MW:48078 2306213 2307010 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02102 product CDS Transcriptional regulator, IclR family:2644873 reverse MW:28013 2308277 2307297 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02103 product CDS 4-hydroxyphenylpyruvate dioxygenase:2643789 forward MW:36556 2308366 2308274 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02104 product CDS 4-hydroxyphenylpyruvate dioxygenase:2642812 forward MW:5881 2308499 2308410 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02105 product hypothetical protein 2309144 2308509 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02106 product CDS Maleylacetoacetate isomerase @ Glutathione S-transferase, zeta (EC 2.5.1.18):2642577 forward MW:23596 2309306 2310805 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02107 product CDS Glycolate dehydrogenase , subunit GlcD:2641795 reverse MW:54212 2310805 2311863 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02108 product CDS Glycolate dehydrogenase , FAD-binding subunit GlcE:2640281 reverse MW:37920 2311867 2313099 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02109 product CDS Glycolate dehydrogenase , iron-sulfur subunit GlcF:2639219 reverse MW:44368 2313135 2313542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02110 product CDS Hypothetical protein GlcG in glycolate utilization operon:2637951 reverse MW:13809 2313606 2315783 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02111 product CDS Malate synthase G:2637480 reverse MW:80259 2316820 2315891 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02112 product CDS putative surface layer protein:2635195 forward MW:33949 2318170 2317193 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02113 product CDS Gluconate utilization system Gnt-I transcriptional repressor:2633893 forward MW:35020 2318454 2318981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02114 product CDS Gluconokinase:2632632 reverse MW:18392 2319079 2320431 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02115 product CDS Gluconate permease:2632007 reverse MW:47588 2320988 2321176 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02116 product CDS Carbon storage regulator:2630098 reverse MW:6878 2322694 2321294 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02117 product CDS: hypothetical protein 2628392:2629792 forward MW:50040 2323702 2323442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02118 product CDS: hypothetical protein 2627384:2627644 forward MW:9489 2324591 2324109 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02119 product CDS Histone acetyltransferase HPA2:2626977 forward MW:18295 2324960 2325904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02120 product CDS Hydrolases of the alpha/beta superfamily:2626126 reverse MW:34813 2325959 2326423 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02121 product CDS Acetyltransferase, GNAT family:2625127 reverse MW:17103 2326543 2328663 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02122 product CDS Ferrichrome-iron receptor:2624477 reverse MW:74844 2326543 2326638 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 2329280 2328759 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02123 product CDS Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase):2622327 forward MW:19180 2329509 2330132 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02124 product CDS Transcriptional regulator TvrR, TetR family:2621577 reverse MW:23120 2330313 2331941 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02125 product CDS N-acetylglucosamine regulated methyl-accepting chemotaxis protein:2620773 reverse MW:57600 2332083 2332511 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02126 product CDS: hypothetical protein 2618575:2619009 reverse MW:15953 2332083 2332145 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 2333431 2332550 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02127 product CDS probable transmembrane protein:2618536 forward MW:29223 2333431 2333327 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 35 product putative signal peptide 2335212 2333572 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02128 product CDS methyl-accepting chemotaxis protein:2617514 forward MW:57601 2336132 2335407 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02129 product CDS Acetyltransferase, GNAT family:2615679 forward MW:30009 2336457 2336335 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02130 product hypothetical protein 2336700 2338232 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02131 product CDS Catalase:2614359 reverse MW:55546 2336700 2336780 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 2338295 2338849 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02132 product CDS FOG: Ankyrin repeat:2612791 reverse MW:19713 2338295 2338348 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 18 product putative signal peptide 2340955 2338862 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02133 product CDS Signal transduction histidine kinase:2612224 forward MW:77719 2341338 2341129 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02134 product CDS: hypothetical protein 2609748:2609957 forward MW:8262 2342529 2341645 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02135 product CDS DNA binding protein HpkR:2609441 forward MW:32255 2342628 2343110 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02136 product CDS: hypothetical protein 2607976:2608485 reverse MW:19551 2343235 2344068 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02137 product CDS Phenazine biosynthesis protein PhzF like:2607851 reverse MW:29434 2345226 2344075 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02138 product CDS Permeases of the major facilitator superfamily:2607011 forward MW:39001 2345438 2346094 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02139 product CDS Beta-phosphoglucomutase:2605648 reverse MW:23714 2346192 2347115 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02140 product CDS rarD protein:2604855 reverse MW:32995 2348234 2347119 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02141 product CDS AFG1-like ATPase:2603967 forward MW:42079 2349746 2348301 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02142 product CDS Sulfate permease:2602785 forward MW:50728 2349890 2351041 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02143 product CDS Beta-lactamase:2601196 reverse MW:41912 2349890 2349955 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2352140 2351034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02144 product CDS ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase:2600052 forward MW:39271 2352409 2353263 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02145 product CDS Ferrous iron transport permease EfeU:2598677 reverse MW:30299 2353272 2354480 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02146 product CDS Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain:2597739 reverse MW:40438 2354505 2355827 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02147 product CDS Ferrous iron transport peroxidase EfeB:2596581 reverse MW:47614 2355857 2356681 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02148 product CDS Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain:2595229 reverse MW:30209 2355857 2355928 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 2357518 2356748 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02149 product CDS: Sulfite oxidase 2593568:2594338 forward MW:29280 2358135 2357515 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02150 product CDS Thiosulfate reductase cytochrome B subunit (membrane anchoring protein):2593571 forward MW:23140 2358813 2358208 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02151 product CDS: hypothetical protein 2592273:2592878 forward MW:20963 2358813 2358745 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2358984 2359673 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02152 product CDS DNA-binding heavy metal response regulator:2592102 reverse MW:26312 2359652 2361040 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02153 product CDS Signal transduction histidine kinase:2591434 reverse MW:51203 2361727 2361059 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02154 product CDS lyase, putative:2590027 forward MW:24780 2362269 2362721 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02155 product CDS Transcriptional regulator, MarR family:2588817 reverse MW:15950 2362718 2364805 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02156 product CDS Inner membrane component of tripartite multidrug resistance system:2588368 reverse MW:77504 2364802 2365011 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02157 product CDS membrane protein, putative:2586284 reverse MW:7728 2365008 2365892 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02158 product CDS HlyD family secretion protein:2586078 reverse MW:32823 2365889 2367322 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02159 product CDS Outer membrane component of tripartite multidrug resistance system:2585197 reverse MW:51632 2365889 2365945 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 2368020 2368853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02160 product CDS Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family:2583066 reverse MW:31095 2368952 2369950 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02161 product CDS Sulfate-binding protein Sbp:2582188 reverse MW:38918 2368952 2369020 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2370418 2370011 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02162 product CDS lipoprotein, putative:2581075 forward MW:14271 2370418 2370356 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 2371611 2370430 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02163 product CDS Cytochrome c heme lyase subunit CcmH:2580656 forward MW:42870 2372078 2371608 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02164 product CDS Cytochrome c heme lyase subunit CcmL:2579478 forward MW:17900 2372078 2372016 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 2372611 2372075 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02165 product CDS Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase:2579011 forward MW:19995 2374581 2372608 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02166 product CDS Cytochrome c heme lyase subunit CcmF:2578478 forward MW:71921 2375051 2374578 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02167 product CDS Cytochrome c-type biogenesis protein CcmE, heme chaperone:2576508 forward MW:16817 2375224 2375048 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02168 product CDS Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE:2576038 forward MW:6736 2376024 2375221 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02169 product CDS Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE:2575865 forward MW:29584 2376750 2376079 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02170 product CDS ABC transporter involved in cytochrome c biogenesis, CcmB subunit:2575007 forward MW:23236 2377385 2376747 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02171 product CDS ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA:2574339 forward MW:20327 2377576 2379225 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02172 product CDS: hypothetical protein 2571861:2573510 reverse MW:58243 2379225 2379548 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02173 product CDS FlhB domain protein:2571861 reverse MW:11883 2380172 2379570 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02174 product CDS Recombination protein RecR:2571516 forward MW:21556 2381167 2380283 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02175 product CDS Transcriptional regulator, LysR family:2570803 forward MW:32931 2381264 2382400 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02176 product CDS METAL-ACTIVATED PYRIDOXAL ENZYME:2569822 reverse MW:40991 2382390 2382782 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02177 product CDS Putative translation initiation inhibitor, yjgF family:2568696 reverse MW:13935 2382802 2383986 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02178 product CDS Glycine/D-amino acid oxidases (deaminating):2568284 reverse MW:43189 2383983 2384873 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02179 product CDS Histone acetyltransferase HPA2:2567103 reverse MW:32145 2385029 2386504 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02180 product CDS NAD-dependent aldehyde dehydrogenases:2566057 reverse MW:51734 2387109 2386783 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02181 product CDS: hypothetical protein co-occurring with RecR 2563977:2564303 forward MW:11680 2389399 2387171 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02182 product CDS DNA polymerase III subunits gamma and tau:2563915 forward MW:80880 2389500 2390300 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02183 product CDS: hypothetical protein 2560780:2561520 reverse MW:27792 2390392 2392074 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02184 product CDS Phospholipase C:2560688 reverse MW:61955 2393208 2392084 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02185 product CDS Potassium efflux system KefA protein / Small-conductance mechanosensitive channel:2558996 forward MW:41344 2393557 2393461 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02186 product Bacteria_small_SRP 2393783 2394271 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02187 product CDS Histone acetyltransferase HPA2:2557297 reverse MW:18025 2395490 2394324 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02188 product CDS: hypothetical protein 2555566:2556756 forward MW:44554 2398282 2395919 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02189 product CDS DNA ligase:2555161 forward MW:86283 2399276 2398410 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02190 product CDS Cell division protein ZipA:2552670 forward MW:32450 2403016 2399528 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02191 product CDS Chromosome partition protein smc:2551552 forward MW:131671 2403679 2403020 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02192 product CDS Transcriptional regulator, GntR family:2548060 forward MW:24965 2403954 2405408 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02193 product CDS Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4):2547126 reverse MW:53181 2405437 2407890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02194 product CDS Xanthine dehydrogenase, molybdenum binding subunit:2545643 reverse MW:89133 2407883 2408752 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02195 product CDS XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase):2543197 reverse MW:31640 2408749 2410062 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02196 product CDS Guanine deaminase:2542331 reverse MW:47894 2411268 2410519 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02197 product CDS Transcriptional regulator, GntR family:2540820 forward MW:27731 2411743 2411390 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02198 product CDS Transthyretin family protein:2539949 forward MW:12997 2412113 2413042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02199 product CDS Chitooligosaccharide deacetylase ; putative uricase:2539226 reverse MW:35632 2413039 2413569 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02200 product CDS Urate oxidase:2538300 reverse MW:19305 2413596 2414591 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02201 product CDS Allantoicase:2537743 reverse MW:36738 2414730 2415242 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02202 product CDS Ureidoglycolate hydrolase:2536609 reverse MW:18893 2415260 2416525 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02203 note CDS conserved hypothetical membrane protein, paralogue of Y20848 2534814:2536091 reverse MW:46391 product hypothetical protein 2416892 2417677 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02204 product CDS Nucleoside-binding outer membrane protein:2534447 reverse MW:29693 2416892 2416960 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2418712 2417804 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02205 product CDS Membrane protein, putative:2533535 forward MW:31374 2419366 2418860 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02206 product CDS Transcriptional regulator, AsnC family:2532479 forward MW:18500 2419532 2420548 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02207 product CDS 1-aminocyclopropane-1-carboxylate deaminase:2531807 reverse MW:37825 2420717 2420956 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02208 product CDS Prevent host death protein, Phd antitoxin:2530624 reverse MW:8753 2422120 2421266 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02209 product CDS Transcriptional regulator, LysR family:2530075 forward MW:30697 2422282 2423127 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02210 product CDS Permease of the drug/metabolite transporter (DMT) superfamily:2529059 reverse MW:30024 2425084 2423156 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02211 product CDS Methyl-accepting chemotaxis protein:2528185 forward MW:68001 2425821 2425336 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02212 product CDS: hypothetical protein 2525520:2526005 forward MW:18084 2426951 2425824 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02213 product CDS Saccharopine dehydrogenase:2525517 forward MW:40250 2427694 2427263 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02214 product CDS metallophosphoesterase:2524078 forward MW:15022 2428022 2429662 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02215 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):2523319 reverse MW:58224 2430926 2429676 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02216 product CDS Arabinose efflux permease:2521665 forward MW:41121 2432372 2431080 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02217 product CDS L-sorbosone dehydrogenase:2520261 forward MW:45744 2432372 2432301 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 2432797 2432369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02218 product CDS Succinate dehydrogenase cytochrome b subunit family protein:2518972 forward MW:15212 2434670 2433084 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02219 product CDS deoxyribodipyrimidine photolyase-related protein:2518257 forward MW:60357 2435588 2434728 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02220 product hypothetical protein 2437126 2435585 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02221 product CDS EA59 gene protein:2515756 forward MW:57130 2437589 2439757 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02222 product CDS Outer membrane ferripyoverdine receptor:2513752 reverse MW:79593 2437589 2437684 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 2440228 2440476 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02223 product CDS: hypothetical protein 2510865:2511113 reverse MW:8626 2440228 2440299 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 2440531 2443227 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02224 product CDS glycosyl hydrolase, family 3:2510810 reverse MW:97843 2440531 2440608 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 2443942 2443286 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02225 product CDS Transcriptional regulator, TetR family:2508055 forward MW:24045 2444431 2446914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02226 product CDS FOG: PAS/PAC domain:2506910 reverse MW:91136 2447076 2447684 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02227 product CDS Transcriptional regulator, TetR family:2504265 reverse MW:22693 2447838 2447722 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02228 product rsmX 2448065 2449690 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02229 product CDS Methyl-accepting chemotaxis protein:2503282 reverse MW:59003 2449795 2450616 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02230 product CDS Oxidoreductase, aldo/keto reductase family:2501546 reverse MW:30232 2450787 2451806 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02231 product CDS Mg2+ and Co2+ transporters:2500554 reverse MW:38477 2451923 2453539 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02232 product CDS Low-affinity inorganic phosphate transporter:2499538 reverse MW:61353 2454808 2453645 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02233 product CDS HlyD family secretion protein:2497696 forward MW:41575 2456484 2454805 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02234 product CDS Permeases of the major facilitator superfamily:2496536 forward MW:60177 2456796 2457893 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02235 product CDS 3-hydroxyisobutyryl-CoA hydrolase:2494545 reverse MW:40467 2457897 2459048 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02236 product CDS Butyryl-CoA dehydrogenase:2493444 reverse MW:41795 2464324 2459093 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02237 product CDS: hypothetical protein 2487017:2492248 forward MW:193520 2465030 2464461 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02238 product CDS FMN reductase, NADPH-dependent:2486880 forward MW:19997 2465241 2465456 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02239 product CDS hypothetical protein:2486040 reverse MW:5692 2466057 2465503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02240 product CDS Streptothricin acetyltransferase, Streptomyces lavendulae type:2485838 forward MW:20951 2466858 2466079 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02241 product CDS DNA polymerase III epsilon subunit:2485262 forward MW:28158 2467376 2466924 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02242 product CDS Ribonuclease HI:2484417 forward MW:16782 2468184 2467423 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02243 product CDS: SAM-dependent methyltransferase 2483157:2483918 forward MW:27920 2468266 2469045 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02244 product CDS Hydroxyacylglutathione hydrolase:2483075 reverse MW:28618 2469205 2470737 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02245 product CDS Membrane-bound lytic murein transglycosylase D precursor:2482148 reverse MW:57394 2470737 2472704 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02246 product CDS ABC transporter, periplasmic substrate-binding protein:2480466 reverse MW:69570 2472701 2474557 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02247 product CDS ABC transporter, periplasmic substrate-binding protein:2478640 reverse MW:69772 2472701 2472778 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 2474559 2475632 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02248 product CDS Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1):2476782 reverse MW:39320 2475634 2476653 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02249 product CDS Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1):2475707 reverse MW:37937 2476655 2478265 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02250 product CDS Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1):2474686 reverse MW:58723 2478290 2479084 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02251 product CDS Enoyl-[acyl-carrier-protein] reductase [NADH]:2473051 reverse MW:27921 2481152 2479194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02252 product CDS Peptidyl-prolyl cis-trans isomerase ppiD:2472147 forward MW:68940 2481555 2481283 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02253 product CDS DNA-binding protein HU-beta:2470058 forward MW:9073 2484098 2481702 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02254 product CDS ATP-dependent protease La Type I:2469639 forward MW:88815 2485592 2484309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02255 product CDS ATP-dependent Clp protease ATP-binding subunit ClpX:2467032 forward MW:46929 2486340 2485699 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02256 product CDS ATP-dependent Clp protease proteolytic subunit:2465642 forward MW:23952 2487742 2486432 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02257 product CDS Cell division trigger factor:2464909 forward MW:48646 2488881 2489360 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02258 product CDS lipoprotein, putative:2462460 reverse MW:17048 2488881 2488940 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 2491613 2489757 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02259 product CDS: hypothetical protein 2459728:2461584 forward MW:67652 2491972 2491742 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02260 product CDS: hypothetical protein 2459432:2459599 forward MW:6296 2492154 2491969 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02261 product CDS: hypothetical protein 2459187:2459372 forward MW:6797 2492628 2492544 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02262 product tRNA-Leu(tag) 2492760 2492685 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02263 product tRNA-His(gtg) 2492888 2492812 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02264 product tRNA-Arg(tct) 2493182 2494036 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02265 product CDS Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)2457304:2458158 reverse MW:30281 2495873 2494101 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02266 product CDS SN-glycerol-3-phosphate transport system permease protein UgpA (TC 3.A.1.1.3):2457239 forward MW:68674 2495873 2495784 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 2496231 2495959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02267 product CDS Probable transmembrane protein:2455381 forward MW:10164 2497044 2496244 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02268 product CDS SN-glycerol-3-phosphate transport system permease protein UgpE (TC 3.A.1.1.3):2455096 forward MW:29962 2497921 2497055 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02269 product CDS SN-glycerol-3-phosphate transport system permease protein UgpA (TC 3.A.1.1.3):2454285 forward MW:32527 2499029 2497914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02270 product CDS SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3):2453426 forward MW:41474 2500123 2499029 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02271 product CDS ABC transporter, ATP-binding protein:2452311 forward MW:42311 2500422 2502275 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02272 product CDS sigma-54 dependent transcriptional regulator:2450918 reverse MW:68809 2502410 2502201 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02273 product hypothetical protein 2503871 2502471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02274 product CDS Cysteinyl-tRNA synthetase:2448869 forward MW:52014 2505567 2503873 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02275 product CDS Glutaminyl-tRNA synthetase:2447467 forward MW:64598 2505775 2506278 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02276 product CDS Peptidyl-prolyl cis-trans isomerase ppiB:2445565 reverse MW:18271 2506275 2507021 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02277 product CDS UDP-2,3-diacylglucosamine hydrolase:2445065 reverse MW:28151 2508758 2507220 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02278 product CDS Inner membrane component of tripartite multidrug resistance system:2444120 forward MW:55470 2509993 2508785 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02279 product CDS Membrane fusion component of tripartite multidrug resistance system:2442555 forward MW:42832 2510572 2510084 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02280 product CDS Transcriptional regulator, MarR family:2441256 forward MW:18152 2511342 2510719 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02281 product CDS tRNA-(ms[2]io[6]A)-hydroxylase:2440621 forward MW:23570 2511896 2511426 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02282 product CDS: hypothetical protein 2439444:2439914 forward MW:18270 2512285 2514900 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02283 product CDS Aconitate hydratase 2 @ 2-methylisocitrate dehydratase (EC 4.2.1.99):2439040 reverse MW:93731 2515621 2515139 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02284 product CDS Methyl-accepting chemotaxis protein:2436201 forward MW:45624 2515639 2516889 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02285 product CDS putative transposase:5941457 reverse MW:46763 2517779 2516916 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02286 product CDS Methyl-accepting chemotaxis protein:2436201 forward MW:45624 2518778 2517885 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02287 product CDS: hypothetical protein 2433934:2434827 forward MW:34003 2519484 2520056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02288 product CDS Integral membrane protein:2433228 reverse MW:20028 2519484 2519543 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 2520359 2521018 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02289 product CDS: hypothetical protein 2431694:2432353 reverse MW:22565 2520376 2520447 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02290 product P10 2521022 2521486 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02291 product hypothetical protein 2522050 2522523 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02292 product hypothetical protein 2522498 2522914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02293 product CDS hypothetical protein:2429010 reverse MW:9605 2522889 2523371 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02294 product CDS hypothetical protein:2429010 reverse MW:9605 2523702 2523953 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02295 product CDS hypothetical protein:2429010 reverse MW:9605 2528992 2524136 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02296 product CDS NAD-specific glutamate dehydrogenase , large form:2428576 forward MW:182096 2529358 2529717 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02297 product CDS: hypothetical protein 2422995:2423354 reverse MW:12932 2529765 2530514 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02298 product CDS 2-pyrone-4,6-dicarboxylic acid hydrolase, putative:2422947 reverse MW:27260 2530720 2531679 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02299 product CDS MoxR-like ATPase in aerotolerance operon:2421992 reverse MW:35444 2531684 2532628 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02300 product CDS hypothetical protein 2420084:2421028 reverse MW:36053 2532625 2533119 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02301 product CDS: hypothetical protein 2419593:2420087 reverse MW:18318 2533112 2534170 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02302 product CDS BatA (Bacteroides aerotolerance operon):2419600 reverse MW:38994 2534167 2535885 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02303 product CDS TPR domain protein in aerotolerance operon:2418545 reverse MW:63448 2535882 2537537 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02304 product CDS BatD:2416830 reverse MW:59946 2535882 2535950 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2537580 2538824 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02305 product CDS Exonuclease SbcD:2415132 reverse MW:45871 2538821 2542465 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02306 product CDS Exonuclease SbcC:2413891 reverse MW:137010 2542912 2542730 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02307 product CDS: hypothetical protein 2409800:2409982 forward MW:6460 2542912 2542838 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 2544261 2543089 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02308 product CDS 3-carboxymuconate cyclase:2409623 forward MW:42598 2544261 2544193 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2544625 2544341 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02309 product CDS: hypothetical protein 2408087:2408371 forward MW:10409 2545817 2544825 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02310 product CDS SUGAR TRANSPORTER:2407887 forward MW:36415 2547211 2545904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02311 product CDS Major facilitator family transporter:2406808 forward MW:47618 2547425 2549167 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02312 product CDS L-arabonate dehydratase:2405287 reverse MW:62278 2549282 2549995 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02313 product CDS Transcriptional regulator of the arabinose operon in Shewanella, GntR family:2403430 reverse MW:26480 2550332 2550931 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02314 product CDS: hypothetical protein 1270199:1270711 forward MW:18789 2550922 2551029 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02315 product CDS hypothetical protein:4910655 reverse MW:34675 2551046 2551486 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02316 product CDS: hypothetical protein 1272716:1272955 forward MW:8640 2554225 2551835 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02317 product CDS: transport protein 2398487:2400877 forward MW:87438 2555281 2554253 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02318 product CDS: BNR repeat protein 2397431:2398459 forward MW:36629 2555281 2555201 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 2556883 2555528 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02319 product CDS: hypothetical protein 2395829:2397184 forward MW:51061 2558561 2557404 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02320 product CDS Glutathionylspermidine synthase family protein:2395308 forward MW:43637 2559322 2558573 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02321 product CDS: hypothetical protein 2393390:2394139 forward MW:25845 2559322 2559263 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 2559775 2559350 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02322 product CDS surface protein:2393362 forward MW:14811 2560445 2559789 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02323 product CDS: hypothetical protein 2392267:2392923 forward MW:24079 2561467 2560442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02324 product CDS Putative potassium channel protein:2392270 forward MW:36654 2562112 2561555 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02325 product CDS Rhomboid family protein:2391157 forward MW:19836 2562850 2562143 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02326 product CDS Putative alpha helical protein:2390569 forward MW:25181 2563530 2562877 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02327 product CDS Putative cytoplasmic protein:2389835 forward MW:24199 2566455 2563789 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02328 product CDS Membrane alanine aminopeptidase N:2388923 forward MW:99191 2567268 2566468 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02329 product CDS: hypothetical protein 2385444:2386244 forward MW:29733 2567558 2567298 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02330 product CDS: hypothetical protein 2385154:2385414 forward MW:9694 2568459 2567587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02331 product CDS GlpG protein (membrane protein of glp regulon):2385125 forward MW:31996 2569427 2568456 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02332 product CDS Diadenosine tetraphosphatase/threonine protein phosphatases:2384256 forward MW:36607 2570317 2569427 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02333 product CDS NAD kinase:2383285 forward MW:32255 2570560 2570772 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02334 product CDS: hypothetical protein 2381940:2382152 reverse MW:8070 2570959 2571252 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02335 product CDS: hypothetical protein 2381460:2381660 reverse MW:7250 2572412 2571345 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02336 product CDS FOG: GGDEF domain:2381367 forward MW:38935 2572809 2573792 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02337 product CDS: hypothetical protein 2378920:2379903 reverse MW:36949 2575038 2573758 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02338 product CDS Arsenic efflux pump protein:2378954 forward MW:45694 2576246 2575038 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02339 product CDS fosmidomycin resistance protein:2377674 forward MW:42726 2578147 2576810 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02340 product CDS major facilitator family transporter:2375902 forward MW:48702 2579149 2578295 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02341 product CDS 1-aminocyclopropane-1-carboxylate deaminase:2374417 forward MW:33509 2581304 2579265 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02342 product CDS 2,4-dienoyl-CoA reductase [NADPH]:2373447 forward MW:72942 2581510 2582643 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02343 product CDS Hydrolase, carbon-nitrogen family:2371202 reverse MW:41412 2582646 2583686 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02344 product CDS Transcriptional regulator, AraC family:2370066 reverse MW:38781 2584020 2584093 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02345 product P9 2584134 2584247 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02346 product CDS hypothetical protein:2368578 reverse MW:3894 2584244 2585767 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02347 product CDS Threonine dehydratase biosynthetic:6137357 forward MW:32232 2586815 2585991 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02348 product CDS lipoprotein, putative:5539350 reverse MW:28935 2586815 2586729 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 2587126 2587050 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02349 product tRNA-Asp(gtc) 2587317 2587241 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02350 product tRNA-Asp(gtc) 2587461 2587386 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02351 product tRNA-Val(tac) 2588441 2587623 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02352 product CDS Oxidoreductase, short chain dehydrogenase/reductase family:5540976 reverse MW:28701 2589649 2588438 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02353 product CDS O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48):5542184 reverse MW:43275 2591178 2589670 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02354 product CDS Amidophosphoribosyltransferase:5543713 reverse MW:55663 2591778 2591191 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02355 product CDS Colicin V production protein:5544313 reverse MW:20882 2592547 2591897 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02356 product CDS DedD protein:5545082 reverse MW:22669 2593835 2592531 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02357 product CDS Dihydrofolate synthase / Folylpolyglutamate synthase (EC 6.3.2.17):5546268 reverse MW:43251 2594752 2593832 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02358 product CDS Acetyl-coenzyme A carboxyl transferase beta chain:5547287 reverse MW:33534 2595625 2595005 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02359 product CDS Phosphoribosylanthranilate isomerase:5548160 reverse MW:21874 2596540 2595686 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02360 product CDS tRNA pseudouridine synthase A:5549075 reverse MW:31839 2599514 2596671 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02361 product CDS Probable type IV pilus assembly FimV-related transmembrane protein:5552049 reverse MW:99504 2599514 2599440 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 2600637 2599624 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02362 product CDS Aspartate-semialdehyde dehydrogenase:5553172 reverse MW:35396 2601283 2600723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02363 product CDS: Proteophosphoglycan precursor (Fragment) 5553258:5553818 reverse MW:20983 2601905 2601303 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02364 product CDS lipoprotein, putative:5554506 reverse MW:24840 2601905 2601846 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 2602691 2602032 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02365 product CDS Transcriptional regulator, TetR family:5555226 reverse MW:25715 2603464 2602811 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02366 product CDS Putative threonine efflux protein:5555999 reverse MW:23101 2603554 2603749 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02367 product P16 2604579 2603794 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02368 product CDS Putative deoxyribonuclease YcfH:5557114 reverse MW:28734 2604950 2604594 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02369 product CDS Type IV pilus biogenesis protein PilZ:5557485 reverse MW:12832 2605971 2604985 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02370 product CDS DNA polymerase III delta prime subunit:5558506 reverse MW:36125 2606380 2605964 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02371 product CDS Thymidylate kinase:5558867 reverse MW:13604 2606404 2607237 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02372 product CDS deoxynucleotide monophosphate kinase, putative:5559772 forward MW:34635 2607240 2609450 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02373 product CDS hypothetical protein:5561985 forward MW:86762 2609440 2611482 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02374 product CDS site-specific recombinase, phage integrase family:5564017 forward MW:78007 2611479 2612474 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02375 product CDS: hypothetical protein 5564014:5565009 forward MW:37130 2612474 2613754 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02376 product CDS hypothetical protein:5566289 forward MW:49754 2613807 2614358 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02377 product hypothetical protein 2615089 2616090 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02378 product CDS hypothetical protein:5568625 forward MW:36437 2616375 2616479 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02379 product hypothetical protein 2616548 2617141 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02380 product hypothetical protein 2617998 2617414 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02381 product CDS hypothetical protein:5571124 reverse MW:43372 2618594 2617995 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02382 product CDS hypothetical protein:5571124 reverse MW:43372 2619599 2619381 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02383 product hypothetical protein 2620113 2621297 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02384 product hypothetical protein 2621366 2622388 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02385 product CDS ISPsy4, transposase:6120546 reverse MW:37529 2622385 2623194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02386 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 2623680 2623300 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02387 product CDS hypothetical protein:3467034 forward MW:6204 2624213 2623770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02388 product CDS hypothetical protein:4784167 reverse MW:10497 2624649 2624254 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02389 product CDS hypothetical protein:3466080 forward MW:4266 2624810 2625280 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02390 product CDS hypothetical protein:4785396 forward MW:7170 2625708 2629190 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02391 product CDS hypothetical protein:3464890 reverse MW:142983 2630110 2629751 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02392 product CDS Thymidylate kinase:3460583 forward MW:12777 2631269 2630130 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02393 product CDS: protein YceG like 3459065:3460204 forward MW:41995 2632088 2631273 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02394 product CDS Aminodeoxychorismate lyase:3459061 forward MW:26904 2633332 2632088 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02395 product CDS 3-oxoacyl-[acyl-carrier-protein] synthase, KASII:3458246 forward MW:43181 2633682 2633446 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02396 product CDS Acyl carrier protein:3456888 forward MW:8613 2634618 2633875 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02397 product CDS 3-oxoacyl-[acyl-carrier protein] reductase:3456459 forward MW:25794 2635572 2634634 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02398 product CDS Malonyl CoA-acyl carrier protein transacylase:3455700 forward MW:30723 2636711 2635689 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02399 product CDS Phosphate:acyl-ACP acyltransferase PlsX:3454645 forward MW:35444 2636898 2636716 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02400 product CDS LSU ribosomal protein L32p:3453618 forward MW:6770 2637439 2636912 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02401 product CDS protein, clustered with ribosomal protein L32p 3452895:3453422 forward MW:19294 2637546 2638124 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02402 product CDS Maf-like protein:3452788 reverse MW:20941 2639175 2638177 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02403 product CDS Periplasmic serine proteases (ClpP class):3452157 forward MW:36423 2639861 2639199 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02404 product CDS Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C:3451135 forward MW:24542 2640819 2639851 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02405 product CDS Ribosomal large subunit pseudouridine synthase C ## LSU Psi955, and Psi2580 3449527:3450483 forward MW:35489 2641227 2641515 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02406 product rne-II 2641525 2644863 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02407 product CDS Ribonuclease E:3448800 reverse MW:121793 2645044 2645229 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02408 product hypothetical protein 2646165 2645146 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02409 product CDS UDP-N-acetylenolpyruvoylglucosamine reductase:3445188 forward MW:37184 2646964 2646200 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02410 product CDS 3-deoxy-manno-octulosonate cytidylyltransferase:3444134 forward MW:27569 2647146 2646961 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02411 note CDS UPF0434 protein YcaR 3443188:3443373 forward MW:6615 product hypothetical protein 2648159 2647164 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02412 product CDS Tetraacyldisaccharide 4'-kinase:3443170 forward MW:36385 2648590 2648159 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02413 product CDS Biopolymer transport protein ExbD/TolR:3442175 forward MW:15593 2649315 2648587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02414 product CDS MotA/TolQ/ExbB proton channel family protein:3441747 forward MW:24225 2651563 2649347 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02415 product CDS DNA internalization-related competence protein ComEC/Rec2:3440987 forward MW:80717 2651801 2652682 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02416 product CDS VgrG protein:3438533 reverse MW:33080 2652624 2653829 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02417 product CDS: hypothetical protein 3436505:3437260 reverse MW:28306 2653826 2654725 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02418 product CDS: hypothetical protein 3435609:3436508 reverse MW:33248 2655547 2654759 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02419 product CDS ABC-type multidrug transport system, permease component:3435575 forward MW:29090 2656476 2655544 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02420 product CDS ABC-type multidrug transport system, ATPase component:3434790 forward MW:34357 2657267 2656644 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02421 product CDS Uncharacterized glutathione S-transferase-like protein:3433690 forward MW:23279 2657443 2659890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02422 product CDS Butyryl-CoA dehydrogenase:3432891 reverse MW:88947 2659967 2660377 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02423 product CDS: hypothetical protein 3429957:3430367 reverse MW:15749 2660571 2661425 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02424 product CDS Pirin:3429763 reverse MW:31347 2664197 2661528 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02425 product CDS Pyruvate dehydrogenase E1 component:3428806 forward MW:99501 2664342 2664794 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02426 product CDS Transcriptional regulator, MarR family:3425992 reverse MW:17112 2665900 2664797 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02427 product CDS Pyruvate dehydrogenase E1 component beta subunit:3425537 forward MW:39931 2666191 2666934 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02428 product CDS N-3-oxohexanoyl-L-homoserine lactone quorum-sensing transcriptional activator:3424144 reverse MW:28331 2667600 2666866 CDS EC_number 2.3.1.184 gene esaI inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P54656 locus_tag NYT1canu_02429 product Acyl-homoserine-lactone synthase 2667820 2669016 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02430 product CDS Aspartate/tyrosine/aromatic aminotransferase:3422515 reverse MW:45439 2669009 2669542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02431 product CDS: hypothetical protein 3420793:3421311 reverse MW:19851 2669532 2670347 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02432 product CDS Dihydrodipicolinate synthase family:3420803 reverse MW:30050 2670347 2671204 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02433 product CDS: hypothetical protein 3419131:3419988 reverse MW:32732 2671188 2671424 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02434 note CDS conserved domain protein 3418911:3419147 reverse MW:9059 product hypothetical protein 2672668 2671487 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02435 product CDS Patatin:3418848 forward MW:40673 2673633 2672701 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02436 product CDS Lipid A biosynthesis lauroyl acyltransferase:3417634 forward MW:35704 2673808 2674494 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02437 product CDS Septum site-determining protein MinC:3416581 reverse MW:26426 2674724 2675536 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02438 product CDS Septum site-determining protein MinD:3415611 reverse MW:29401 2675536 2675790 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02439 product CDS Cell division topological specificity factor MinE:3414799 reverse MW:9676 2675881 2676516 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02440 product CDS Ribosomal large subunit pseudouridine synthase A:3414454 reverse MW:23804 2676888 2678177 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02441 product CDS Aspartyl aminopeptidase:3413447 reverse MW:46788 2678954 2678235 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02442 product CDS Transcriptional regulator, GntR family:3412100 forward MW:27457 2679312 2680379 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02443 product CDS ABC-type Fe3+ transport system, periplasmic component:3410963 reverse MW:36452 2679312 2679380 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2680458 2681264 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02444 product CDS: hypothetical protein 3409071:3409877 reverse MW:30139 2681261 2682103 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02445 product CDS ABC transporter permease protein:3409074 reverse MW:31194 2682090 2682887 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02446 product CDS Thiamin ABC transporter, transmembrane component:3408245 reverse MW:29475 2682889 2683878 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02447 product CDS ABC-type spermidine/putrescine transport systems, ATPase components:3407446 reverse MW:36570 2683953 2684606 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02448 product CDS Phosphoserine phosphatase:3406382 reverse MW:24104 2685587 2684625 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02449 product CDS Oxidoreductase, zinc-binding:3405710 forward MW:33689 2685726 2687807 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02450 product CDS Periplasmic protease:3404642 reverse MW:78625 2685726 2685809 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 2687942 2689714 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02451 product CDS EAL domain/GGDEF domain protein:3402393 reverse MW:66167 2690277 2689906 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02452 product CDS: hypothetical protein 3400058:3400429 forward MW:13839 2690615 2690274 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02453 product CDS Transcriptional regulator, Cro/CI family:3400061 forward MW:11980 2691168 2690716 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02454 note CDS DUF1232 domain-containing protein 3399167:3399619 forward MW:16760 product hypothetical protein 2692327 2691557 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02455 product CDS FKBP-type peptidyl-prolyl cis-trans isomerase fklB:3398778 forward MW:26713 2692327 2692271 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 2693949 2692534 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02456 product CDS: hypothetical protein 3396386:3397801 forward MW:52427 2694214 2694729 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02457 product CDS: hypothetical protein 3395606:3396121 reverse MW:18356 2694214 2694324 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 37 product putative signal peptide 2695191 2694802 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02458 product CDS glyoxalase, putative:3395533 forward MW:14569 2696438 2695248 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02459 product CDS L-carnitine dehydratase/bile acid-inducible protein F:3395087 forward MW:43196 2696956 2696561 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02460 product CDS: hypothetical protein 3393379:3393774 forward MW:14048 2696956 2696888 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2697394 2697318 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02461 product tRNA-Asp(gtc) 2697490 2697415 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02462 product tRNA-Val(tac) 2697662 2698582 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02463 product CDS DNA recombination-dependent growth factor C:3392673 reverse MW:34295 2698671 2699618 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02464 product CDS Sodium-dependent transporter:3391664 reverse MW:33822 2700207 2700097 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02465 product hypothetical protein 2702130 2700256 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02466 product CDS Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase / Acyl-[acyl-carrier-protein]synthetase (EC 6.2.1.20):3390079 forward MW:69065 2702374 2703729 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02467 product CDS Sensory box histidine kinase/response regulator:3387961 reverse MW:127347 2703766 2705847 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02468 product CDS Sensory box histidine kinase/response regulator:3387961 reverse MW:127347 2706841 2705903 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02469 product CDS Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO:3384432 forward MW:35811 2707993 2707019 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02470 product CDS Cysteine synthase:3383316 forward MW:34370 2708121 2709191 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02471 product CDS: hypothetical protein 3381144:3382214 reverse MW:40305 2709529 2710374 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02472 product CDS ATPase associated with various cellular activities, AAA_5:3380806 reverse MW:32207 2710414 2711592 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02473 product CDS Thioredoxin reductase:3379921 reverse MW:45561 2711794 2712510 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02474 product CDS: hypothetical protein 3377825:3378541 reverse MW:27334 2713067 2712543 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02475 product CDS: hypothetical protein 3377268:3377792 forward MW:19965 2713902 2713114 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02476 product CDS Glutamine amidotransferase, class-II:3377221 forward MW:29220 2714455 2713979 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02477 product CDS Permeases of the major facilitator superfamily:3376356 forward MW:17970 2714588 2716645 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02478 product CDS Protease II:3375747 reverse MW:76469 2716730 2717206 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02479 product CDS transcriptional regulator, Crp/Fnr family:3373605 reverse MW:17028 2717272 2717646 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02480 product CDS putative cytoplasmic protein:3373063 reverse MW:14205 2717942 2719711 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02481 product CDS Multicopper oxidase:3372363 reverse MW:64820 2719708 2720592 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02482 product CDS Copper resistance protein B:3370612 reverse MW:31096 2719708 2719812 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 35 product putative signal peptide 2720665 2721162 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02483 product CDS RNA methyltransferase, TrmH family:3369670 reverse MW:18170 2721271 2721651 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02484 product CDS: hypothetical protein 3368684:3369064 reverse MW:13283 2722105 2721656 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02485 product CDS YcgN (Fragment):3368679 forward MW:17146 2722317 2722910 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02486 product CDS Nitroreductase family protein:3368018 reverse MW:22076 2723918 2722986 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02487 product CDS D-3-phosphoglycerate dehydrogenase:3367349 forward MW:34179 2724282 2723989 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02488 product CDS Protein YcgL:3366346 forward MW:11300 2725412 2724279 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02489 product CDS Ribonuclease D:3366056 forward MW:42499 2727261 2725618 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02490 product CDS membrane protein, putative:3364717 forward MW:60850 2729185 2727494 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02491 product CDS NAD-dependent malic enzyme:3362841 forward MW:62122 2729980 2729498 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02492 product CDS Gas vesicle protein:3360837 forward MW:17492 2730630 2730220 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02493 product CDS DNA polymerase, beta domain protein region:3360115 forward MW:14947 2731256 2730741 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02494 product CDS: hypothetical protein 3359418:3359594 forward MW:6284 2731786 2731505 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02495 product CDS ISPsy5, Orf1:3358830 forward MW:10965 2732457 2732239 CDS gene csp inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:O54310 locus_tag NYT1canu_02496 product Cold shock-like protein 2733641 2732460 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02497 product CDS retron reverse transcriptase:3357875 forward MW:45516 2734466 2734377 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02498 product tRNA-Ser(cga) 2735268 2734558 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02499 product CDS Phosphoribosylaminoimidazole-succinocarboxamide synthase:3355777 forward MW:26921 2736055 2735297 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02500 product CDS Metal-dependent hydrolases of the beta-lactamase superfamily I:3355038 forward MW:27520 2737174 2736056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02501 product CDS: Probable transmembrane protein 3353161:3354279 forward MW:40485 2738071 2737193 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02502 product CDS Dihydrodipicolinate synthase:3353142 forward MW:31221 2738397 2738960 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02503 product CDS Glycine cleavage system transcriptional antiactivator GcvR:3351875 reverse MW:18434 2738970 2739443 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02504 product CDS Thiol peroxidase, Bcp-type:3351365 reverse MW:17462 2740580 2739510 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02505 product CDS Putative permease PerM (= YfgO):3350825 forward MW:39305 2740864 2740613 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02506 product CDS SirA-like:3349722 forward MW:9142 2741005 2742438 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02507 product CDS Exported zinc metalloprotease YfgC precursor:3349330 reverse MW:53221 2741005 2741070 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2743598 2742540 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02508 product CDS Quinolinate synthetase:3347795 forward MW:38753 2744005 2745603 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02509 product CDS Polygalacturonase:3346330 reverse MW:55435 2744005 2744109 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 35 product putative signal peptide 2746536 2745727 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02510 product hypothetical protein 2747421 2746891 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02511 product CDS L-lysine permease:5514802 forward MW:22148 2748270 2747848 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02512 product CDS N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157):3342487 forward MW:14403 2748951 2749811 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02513 product CDS Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like:3341387 reverse MW:31365 2749813 2750568 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02514 product hypothetical protein 2750565 2751266 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02515 product CDS: hypothetical protein in PFGI-1-like cluster 5998591:5999289 forward MW:25968 2751266 2752612 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02516 product CDS Replicative DNA helicase in PFGI-1-like cluster:3339069 reverse MW:49343 2752609 2752950 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02517 product CDS: hypothetical protein 3337385:3337726 reverse MW:12327 2752952 2753359 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02518 product hypothetical protein 2753356 2753601 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02519 product CDS: hypothetical protein in PFGI-1-like cluster 6002274:6002510 forward MW:8467 2753591 2753854 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02520 product CDS Alginate biosynthesis transcriptional activator:3336744 reverse MW:9621 2753857 2755605 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02521 product CDS Protein with ParB-like nuclease domain in PFGI-1-like cluster:3336478 reverse MW:64248 2755642 2756379 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02522 product CDS: hypothetical protein in PFGI-1-like cluster 3333956:3334693 reverse MW:27590 2756385 2757746 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02523 product CDS: hypothetical protein in PFGI-1-like cluster 6005270:6006622 forward MW:49109 2757743 2758408 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02524 product hypothetical protein 2758478 2759257 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02525 product CDS: hypothetical protein in PFGI-1-like cluster 3331077:3331856 reverse MW:28828 2759410 2759838 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02526 product CDS Integrase regulator R:3330924 reverse MW:15985 2759840 2760295 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02527 product CDS Single-stranded DNA-binding protein in PFGI-1-like cluster:3330494 reverse MW:16941 2760495 2760737 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02528 product CDS hypothetical protein:3329713 reverse MW:4203 2761919 2762995 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02529 product CDS hypothetical protein in PFGI-1-like cluster:3329228 reverse MW:71256 2762998 2764950 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02530 product CDS: Superfamily II DNA/RNA helicases, SNF2 family 906457:909213 forward MW:104515 2765829 2765062 CDS EC_number 3.4.22.- gene avrRpt2 inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:Q6LAD6 locus_tag NYT1canu_02531 product Cysteine protease avirulence protein AvrRpt2 2766133 2767278 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02532 product CDS Conjugative transfer protein PilL in PFGI-1-like cluster:5958956 reverse MW:40284 2766133 2766195 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 2767275 2769011 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02533 product CDS Conjugative transfer protein PilN in PFGI-1-like cluster:5957478 reverse MW:48247 2767275 2767352 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 2769013 2770371 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02534 product CDS Conjugative transfer protein PilO in PFGI-1-like cluster:5955932 reverse MW:43830 2770361 2770969 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02535 product CDS Conjugative transfer protein PilP in PFGI-1-like cluster:5954677 reverse MW:19010 2770361 2770441 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 2770966 2772597 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02536 product CDS Conjugative transfer ATPase PilQ in PFGI-1-like cluster:5954123 reverse MW:59143 2772587 2773678 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02537 product CDS Conjugative transfer protein PilR in PFGI-1-like cluster:5952277 reverse MW:31968 2773715 2774239 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02538 product CDS Conjugative transfer protein PilS in PFGI-1-like cluster:5951374 reverse MW:17998 2774242 2775174 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02539 product CDS Conjugative transfer ATPase PilU in PFGI-1-like cluster:5950847 reverse MW:33529 2775171 2776541 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02540 product CDS Conjugative transfer pilus-tip adhesin protein PilV in PFGI-1-like cluster:5949918 reverse MW:47674 2776572 2777012 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02541 product hypothetical protein 2777170 2777081 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02542 product hypothetical protein 2778525 2777569 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02543 product CDS Tyrosine recombinase XerC:5947520 forward MW:34884 2779072 2778686 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02544 product CDS: hypothetical protein 5946017:5946403 forward MW:14148 2780108 2779617 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02545 product CDS hypothetical protein:397822 forward MW:17303 2780716 2781843 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02546 note CDS conserved hypothetical protein 5943246:5944373 reverse MW:40507 product hypothetical protein 2780716 2780778 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 2784783 2782747 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02547 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):6072827 forward MW:68814 2786596 2785070 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02548 product CDS Transposase:6070504 forward MW:56928 2787015 2786680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02549 product CDS ISPpu14, transposase Orf2:6068894 forward MW:12279 2787344 2787012 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02550 note CDS Conserved domain protein 6068230:6068562 forward MW:12118 product hypothetical protein 2788857 2787877 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02551 product CDS Aldo-keto reductase:5985300 forward MW:35739 2788990 2789883 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02552 product CDS Transcriptional regulator:3294831 forward MW:33037 2790124 2790345 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02553 product hypothetical protein 2791334 2790372 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02554 product CDS Tyrosine recombinase XerC:5982805 forward MW:35257 2791967 2792929 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02555 product CDS ATP-binding region, ATPase-like:5981210 reverse MW:35946 2792940 2793284 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02556 product hypothetical protein 2793286 2793849 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02557 product hypothetical protein 2794029 2796050 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02558 product CDS DNA topoisomerase III:5809915 reverse MW:73593 2796860 2797126 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02559 product hypothetical protein 2797197 2797346 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02560 product radC 2797476 2798027 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02561 product hypothetical protein 2798005 2798156 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02562 product radC 2798238 2798606 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02563 product hypothetical protein 2798688 2798841 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02564 product radC 2798973 2799548 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02565 product CDS: Periplasmic protein TonB, links inner and outer membranes 5973630:5974205 reverse MW:20232 2800611 2799802 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02566 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 2801630 2800608 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02567 product CDS ISPsy4, transposase:6120546 reverse MW:37529 2801818 2802111 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02568 product hypothetical protein 2802222 2802557 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02569 product CDS: hypothetical protein 5884416:5884751 reverse MW:12759 2802658 2803269 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02570 product CDS: Hypothetical protein 5883704:5884315 reverse MW:22637 2803352 2803876 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02571 product CDS: Hypothetical protein 5883097:5883621 reverse MW:19719 2803942 2804541 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02572 product CDS: Hypothetical protein 5882432:5883031 reverse MW:22627 2804572 2806023 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02573 product CDS: Plasmid related protein 5880950:5882401 reverse MW:54535 2806133 2808391 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02574 product CDS Superfamily II DNA/RNA helicases, SNF2 family:5880840 reverse MW:83968 2808469 2808756 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02575 product hypothetical protein 2808939 2809649 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02576 product CDS Methyl-accepting chemotaxis protein:5878034 reverse MW:25525 2809658 2810404 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02577 product CDS probable exported protein 5876569:5877315 reverse MW:27672 2809658 2809735 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 2810389 2810946 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02578 product CDS Soluble lytic murein transglycosylase proteins (some contain LysM/invasin domains):5876269 reverse MW:8747 2810389 2810454 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2810943 2811449 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02579 product CDS: hypothetical protein 5875524:5876030 reverse MW:18129 2810943 2811005 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 2811460 2813619 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02580 product CDS Type IV secretory pathway, VirD4 components:5875513 reverse MW:80350 2813665 2814414 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02581 product CDS putative membrane protein:5873308 reverse MW:28023 2814424 2815887 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02582 product CDS putative DNA helicase:5872495 reverse MW:53057 2815897 2816229 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02583 product CDS Aconitase B:5871076 reverse MW:12347 2816351 2816671 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02584 product CDS Candidate type III effector Hop protein:5870664 reverse MW:13116 2816351 2816416 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2816668 2816907 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02585 product CDS: hypothetical protein 5870066:5870305 reverse MW:8602 2816928 2817296 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02586 product CDS: hypothetical protein 5869677:5870045 reverse MW:13011 2816928 2817029 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 34 product putative signal peptide 2817312 2817704 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02587 product CDS: hypothetical protein 5869269:5869661 reverse MW:14266 2817701 2818369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02588 product CDS Possible exported protein:5664472 reverse MW:25185 2818366 2819289 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02589 product CDS: hypothetical protein 5662884:5663807 reverse MW:33427 2819279 2820766 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02590 product CDS putative exported protein:5867694 reverse MW:52161 2820744 2821205 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02591 product CDS putative lipoprotein:5866115 reverse MW:12918 2821205 2824213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02592 product CDS Type IV secretory pathway, VirB4 components:5660965 reverse MW:111082 2824210 2824509 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02593 product CDS: hypothetical protein 6125086:6125376 forward MW:10858 2824506 2825189 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02594 product CDS Protein-disulfide isomerase:5657715 reverse MW:25219 2825190 2825771 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02595 product hypothetical protein 2829760 2826002 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02596 product CDS hypothetical protein:6011305 reverse MW:139791 2830267 2831682 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02597 product CDS: hypothetical protein 6011812:6013227 forward MW:51763 2832209 2833141 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02598 product hypothetical protein 2833435 2833908 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02599 product CDS: hypothetical protein 5653691:5654122 reverse MW:15762 2833435 2833530 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 2833905 2834843 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02600 product CDS: hypothetical protein 5652756:5653694 reverse MW:33419 2833905 2833976 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 2834864 2836231 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02601 product CDS: hypothetical protein 5651368:5652759 reverse MW:48484 2834864 2834932 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 2836234 2836608 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02602 product CDS hypothetical protein:5651365 reverse MW:15003 2836605 2838143 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02603 product CDS putative membrane protein:6051345 reverse MW:55645 2838587 2838195 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02604 product CDS hypothetical protein:6049755 forward MW:10975 2840090 2838810 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02605 product CDS Error-prone, lesion bypass DNA polymerase V (UmuC):6049140 forward MW:47467 2840511 2840077 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02606 product CDS Error-prone repair protein UmuD:6047873 forward MW:15719 2840627 2841319 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02607 product CDS Gifsy-2 prophage protein:5416734 forward MW:26317 2841748 2841659 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02608 product hypothetical protein 2841846 2843663 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02609 product CDS Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,:5645428 reverse MW:60511 2843660 2844226 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02610 product CDS Integrase:2872946 reverse MW:22002 2844223 2845092 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02611 product CDS Integrase:2872383 reverse MW:32341 2845495 2845419 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02612 product tRNA-Pro(tgg) 2845666 2845591 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02613 product tRNA-Lys(ttt) 2846419 2845730 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02614 product CDS Queuosine Biosynthesis QueC ATPase:2870876 forward MW:24280 2847068 2846421 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02615 product CDS Queuosine Biosynthesis QueE Radical SAM:2870185 forward MW:24026 2847866 2847240 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02616 product CDS TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain:2869366 forward MW:26326 2848565 2848065 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02617 product CDS 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor:2868541 forward MW:17734 2848565 2848485 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 2849919 2848618 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02618 product CDS tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins:2867988 forward MW:45844 2849919 2849854 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2850986 2849916 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02619 product CDS TolA protein:2866690 forward MW:38573 2851450 2850986 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02620 product CDS Tol biopolymer transport system, TolR protein:2865620 forward MW:16736 2852160 2851465 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02621 product CDS MotA/TolQ/ExbB proton channel family protein:2865141 forward MW:25266 2852617 2852150 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02622 product CDS 4-hydroxybenzoyl-CoA thioesterase family active site:2864456 forward MW:17597 2852749 2852621 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02623 product CDS: hypothetical protein 2863857:2863985 forward MW:4663 2853813 2852752 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02624 product CDS Holliday junction DNA helicase RuvB:2863854 forward MW:38925 2854422 2853814 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02625 product CDS Holliday junction DNA helicase RuvA:2862792 forward MW:22100 2855055 2854531 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02626 product CDS Crossover junction endodeoxyribonuclease RuvC:2862075 forward MW:18443 2855932 2855186 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02627 product CDS: hypothetical protein 2860674:2861420 forward MW:26551 2857822 2856047 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02628 product CDS Aspartyl-tRNA synthetase @ Aspartyl-tRNA(Asn) synthetase (EC 6.1.1.23) ## unambiguous:2860559 forward MW:66353 2858451 2858107 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02629 product CDS: hypothetical protein 2858242:2858499 forward MW:9407 2859284 2858811 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02630 product CDS Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase:2857795 forward MW:17773 2859752 2860360 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02631 product CDS Cold shock protein CspC:2856854 reverse MW:21961 2860648 2860442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02632 product CDS slyX protein, putative:2856164 forward MW:8144 2861076 2860645 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02633 product CDS Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases:2855961 forward MW:16366 2861993 2863339 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02634 product CDS Outer membrane porin, OprD family:2854614 reverse MW:48242 2861993 2862064 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 2863516 2865231 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02635 product CDS Prolyl-tRNA synthetase ## Bacterial type:2853091 reverse MW:63033 2865298 2866254 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02636 product CDS lipoprotein, putative:2851309 reverse MW:35873 2867351 2866290 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02637 product CDS DNA polymerase IV:2850317 forward MW:40139 2867611 2867687 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02638 product tRNA-Met(cat) 2867880 2867956 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02639 product tRNA-Met(cat) 2868307 2870949 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02640 product CDS membrane protein, putative:2848300 reverse MW:96397 2870949 2872283 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02641 product CDS Type IV secretory pathway, VirJ component:2845658 reverse MW:48068 2874273 2872378 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02642 product CDS Kup system potassium uptake protein:2844229 forward MW:68479 2874597 2875685 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02643 product CDS Catalase:2842010 reverse MW:39360 2876036 2877379 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02644 product CDS Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase:2840616 reverse MW:51268 2877481 2877921 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02645 product CDS Histone acetyltransferase HPA2:2839126 reverse MW:16653 2878015 2878725 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02646 product CDS S4 domain protein:2838628 reverse MW:27569 2878807 2879268 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02647 product CDS: hypothetical protein 2837339:2837800 reverse MW:17464 2879255 2879974 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02648 note CDS COG1720: Uncharacterized conserved protein 2836633:2837352 reverse MW:26530 product hypothetical protein 2880833 2880054 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02649 product CDS Ferredoxin--NADP(+) reductase:2836553 forward MW:29683 2880957 2881883 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02650 product CDS LysR family transcriptional regulator 2834724:2835623 reverse MW:33315 2882250 2881885 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02651 product CDS Diacylglycerol kinase:2834722 forward MW:12825 2882981 2882334 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02652 product CDS DNA-binding response regulator, LuxR family:2834273 forward MW:23336 2883943 2883233 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02653 product CDS Putative cytoplasmic protein:2833374 forward MW:26922 2884148 2884564 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02654 product CDS Putative NADPH-quinone reductase (modulator of drug activity B):2832459 reverse MW:15311 2884148 2884213 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2884764 2885885 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02655 product CDS Decarboxylase family protein:2831843 reverse MW:42339 2886312 2885890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02656 product CDS Regulatory protein RecX:2830717 forward MW:16221 2887427 2886363 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02657 product CDS RecA protein:2830244 forward MW:37670 2888021 2887521 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02658 note CDS C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 2828586:2829086 forward MW:17162 product hypothetical protein 2888451 2891078 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02659 product CDS DNA mismatch repair protein MutS:2828069 reverse MW:94172 2891325 2891648 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02660 product CDS 4Fe-4S ferredoxin, iron-sulfur binding:2825282 reverse MW:12017 2891842 2891711 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02661 product PrrB_RsmZ 2893197 2892190 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02662 product CDS RNA polymerase sigma factor RpoS:2824417 forward MW:37999 2894168 2893302 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02663 product CDS Lipoprotein NlpD:2823308 forward MW:30408 2895051 2894374 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02664 product CDS Protein-L-isoaspartate O-methyltransferase:2822236 forward MW:23407 2895800 2895051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02665 product CDS 5-nucleotidase SurE:2821559 forward MW:26773 2896846 2895788 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02666 product CDS tRNA pseudouridine 13 synthase:2820822 forward MW:38835 2897316 2896843 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02667 product CDS 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase:2819767 forward MW:16749 2898215 2897370 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02668 product CDS S-formylglutathione hydrolase:2819240 forward MW:32729 2899424 2898312 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02669 product CDS S-(hydroxymethyl)glutathione dehydrogenase:2818298 forward MW:39233 2899529 2900425 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02670 product CDS Transcriptional regulator, LysR family, in formaldehyde detoxification operon:2817081 reverse MW:33941 2901142 2900432 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02671 product CDS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase:2816178 forward MW:25907 2901434 2901156 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02672 product CDS Cell division protein FtsB:2815454 forward MW:10499 2902910 2901624 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02673 product CDS Enolase:2814986 forward MW:45623 2903894 2903049 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02674 product CDS 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase:2813561 forward MW:30947 2905540 2903909 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02675 product CDS CTP synthase:2812701 forward MW:59737 2907171 2905804 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02676 product CDS tRNA(Ile)-lysidine synthetase:2810806 forward MW:49344 2908240 2907293 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02677 product CDS Acetyl-coenzyme A carboxyl transferase alpha chain:2809317 forward MW:34975 2911890 2908369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02678 product CDS DNA polymerase III alpha subunit:2808241 forward MW:131183 2912611 2911958 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02679 product CDS Ribonuclease HII:2804652 forward MW:23089 2913765 2912623 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02680 product CDS Lipid-A-disaccharide synthase:2803987 forward MW:41656 2914544 2913768 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02681 product CDS Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase:2802842 forward MW:27981 2914981 2914541 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02682 product CDS (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase:2802069 forward MW:16713 2916146 2915091 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02683 product CDS UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase:2801519 forward MW:36781 2916652 2916149 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02684 product CDS Outer membrane protein H precursor:2800461 forward MW:18867 2916652 2916587 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 2919085 2916698 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02685 product CDS Outer membrane protein assembly factor YaeT precursor:2799912 forward MW:87505 2919085 2919023 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 2920525 2919173 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02686 product CDS Membrane-associated zinc metalloprotease:2797437 forward MW:47858 2921833 2920643 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02687 product CDS 1-deoxy-D-xylulose 5-phosphate reductoisomerase:2795967 forward MW:42134 2922645 2921830 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02688 product CDS Phosphatidate cytidylyltransferase:2794780 forward MW:29179 2923400 2922645 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02689 product CDS Undecaprenyl pyrophosphate synthetase:2793965 forward MW:26094 2923974 2923417 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02690 product CDS Ribosome recycling factor:2793193 forward MW:20455 2924714 2923971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02691 product CDS Uridylate kinase:2792639 forward MW:26583 2925783 2924920 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02692 product CDS Translation elongation factor Ts:2791690 forward MW:30582 2926717 2925974 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02693 product CDS SSU ribosomal protein S2p (SAe):2790636 forward MW:27201 2926835 2926739 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_02694 product t44 2927030 2927812 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02695 product CDS Methionine aminopeptidase:2789580 reverse MW:28729 2927879 2930575 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02696 product CDS [Protein-PII] uridylyltransferase:2788731 reverse MW:102739 2930678 2931871 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02697 product CDS N-succinyl-L,L-diaminopimelate aminotransferase alternative:2785932 reverse MW:43744 2931983 2932816 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02698 product CDS Transcription-repair coupling factor (superfamily II helicase):2784627 reverse MW:30957 2933143 2932913 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02699 product CDS: hypothetical protein 2783467:2783697 forward MW:9040 2933334 2933723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02700 product CDS: a glutathione-dependent thiol reductase 2782887:2783276 reverse MW:14717 2933771 2934805 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02701 product CDS 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase:2782839 reverse MW:36120 2934866 2936071 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02702 product CDS Cysteine desulfurase CsdA-CsdE , main protein CsdA:2781744 reverse MW:43251 2936068 2936475 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02703 product CDS Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE:2780542 reverse MW:14962 2937296 2936466 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02704 product CDS HesA/MoeB/ThiF family protein related to EC-YgdL:2780144 forward MW:29740 2937495 2940023 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02705 product CDS probable glucosyl transferase:2779115 reverse MW:95420 2940123 2941274 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02706 product CDS N-succinyl-L,L-diaminopimelate desuccinylase:2776487 reverse MW:41110 2941274 2942083 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02707 product CDS Ribosomal RNA large subunit methyltransferase A:2775336 reverse MW:30135 2942103 2942480 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02708 product CDS: hypothetical protein 2774130:2774507 reverse MW:14003 2942672 2945173 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02709 product CDS Glycerol-3-phosphate acyltransferase:2773911 reverse MW:93734 2945285 2945635 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02710 product CDS Lipoprotein-related protein:2771325 reverse MW:12929 2945843 2946532 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02711 product CDS: hypothetical protein 2770078:2770767 reverse MW:23841 2945843 2945914 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 2946843 2946971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02712 product CDS: hypothetical protein 2769639:2769767 reverse MW:4728 2947782 2946973 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02713 product CDS SAM-dependent methyltransferase:2769637 forward MW:29122 2947879 2948502 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02714 product CDS Periplasmic protein TonB, links inner and outer membranes:2768731 reverse MW:22911 2949319 2948630 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02715 product CDS extensin-like protein:2767987 forward MW:25438 2950330 2949461 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02716 note CDS COG1801: Uncharacterized conserved protein 2766287:2767156 forward MW:32854 product hypothetical protein 2950638 2950327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02717 product CDS hypothetical protein:2766290 forward MW:7643 2951536 2950862 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02718 product CDS Inactive of metal-dependent proteases, putative molecular chaperone:2765755 forward MW:23905 2952271 2951624 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02719 product CDS Adenylate kinase:2764993 forward MW:23276 2955187 2952551 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02720 product CDS Phosphoenolpyruvate carboxylase:2764066 forward MW:97673 2955566 2955979 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02721 product CDS: hypothetical protein 2760638:2761051 reverse MW:14666 2956038 2956820 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02722 product CDS Outer membrane lipoprotein omp16 precursor:2760579 reverse MW:28401 2956038 2956094 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 2957217 2956897 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02723 product CDS Putative lipoprotein in cluster with 2759418:2759720 forward MW:10738 2958110 2957214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02724 product CDS Hydrolase of the alpha/beta superfamily in cluster with 2758507:2759403 forward MW:32952 2959638 2958361 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02725 product CDS: hypothetical protein 2756979:2758256 forward MW:47827 2960505 2959780 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02726 product CDS Transcriptional regulator, TetR family:2756837 forward MW:27203 2962085 2960583 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02727 product CDS Lysyl-tRNA synthetase (class II):2756034 forward MW:57003 2963069 2962155 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02728 product CDS Peptide chain release factor 2; programmed frameshift-containing:2754462 forward MW:33892 2964362 2963358 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02729 product CDS diguanylate cyclase (GGDEF domain) with PAS/PAC sensor:2753259 forward MW:36926 2965418 2964408 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02730 product CDS Chemotaxis response regulator protein-glutamate methylesterase group 3 operon:2752209 forward MW:36315 2967796 2965415 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02731 product CDS Sensor histidine kinase/response regulator:2751202 forward MW:86580 2968482 2967793 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02732 product CDS Chemotaxis signal transduction protein:2748824 forward MW:25230 2969762 2968482 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02733 product CDS probable protein methyltransferase:2748135 forward MW:46195 2970295 2969759 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02734 product CDS Chemotaxis signal transduction protein:2746858 forward MW:19986 2971925 2970303 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02735 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):2746314 forward MW:58872 2972195 2978149 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02736 product CDS Leucine-rich repeat (LRR) protein:2744422 reverse MW:223077 2978953 2978207 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02737 product CDS putative membrane protein:2738410 forward MW:26094 2979247 2981334 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02738 product CDS Signal transduction histidine kinase:2737370 reverse MW:75998 2982504 2981398 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02739 product CDS NADH:flavin oxidoreductases, Old Yellow Enzyme family:2735219 forward MW:40645 2984328 2982619 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02740 product CDS Single-stranded-DNA-specific exonuclease RecJ:2733998 forward MW:62269 2984944 2984402 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02741 product CDS YaeQ protein:2732215 forward MW:20733 2985239 2986117 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02742 product CDS NAD(FAD)-utilizing enzyme possibly involved in translation:2731339 reverse MW:31289 2985239 2985325 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 2986586 2986290 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02743 product CDS: hypothetical protein 2730031:2730327 forward MW:10581 2986874 2987536 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02744 product CDS DNA-binding response regulator, LuxR family:2729743 reverse MW:23757 2988840 2987509 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02745 product CDS Response regulator/EAL domain protein:2729108 forward MW:45979 2992563 2988922 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02746 product CDS Signal transduction histidine kinase:2727695 forward MW:132016 2994093 2992684 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02747 product CDS Threonine synthase:2723933 forward MW:51830 2995502 2994198 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02748 product CDS Homoserine dehydrogenase:2722419 forward MW:46204 2996389 2995649 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02749 product CDS Thiol:disulfide interchange protein DsbC:2720968 forward MW:26557 2996389 2996315 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 2997431 2996535 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02750 product CDS Tyrosine recombinase XerD:2720082 forward MW:33616 2997885 2997535 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02751 product CDS LSU ribosomal protein L19p:2719082 forward MW:12969 2998682 2997930 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02752 product CDS tRNA (Guanine37-N1) -methyltransferase:2718687 forward MW:28030 2999227 2998688 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02753 product CDS 16S rRNA processing protein RimM:2717929 forward MW:20159 2999490 2999233 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02754 product CDS SSU ribosomal protein S16p:2717384 forward MW:9594 3001114 2999738 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02755 product CDS Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1):2716879 forward MW:49351 3001330 3002142 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02756 product CDS: CcsA-related protein 2714475:2715371 reverse MW:32770 3002149 3003402 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02757 product CDS CBS domain protein:2714468 reverse MW:46702 3003533 3004843 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02758 product CDS Permeases of the major facilitator superfamily:2713084 reverse MW:46332 3006109 3004928 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02759 product CDS Phosphoribosylglycinamide formyltransferase 2:2711689 forward MW:42357 3006680 3006213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02760 product CDS Putative preQ0 transporter:2710404 forward MW:16950 3007653 3007435 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02761 product CDS: hypothetical protein 5905957:5906175 reverse MW:7960 3008177 3007653 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02762 product CDS carbonic anhydrase, family 3:5906699 reverse MW:18465 3008832 3008236 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02763 product CDS Hypothetical nudix hydrolase YeaB:5907354 reverse MW:22298 3008983 3009534 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02764 product CDS MutT/nudix family protein:5908056 forward MW:20805 3009594 3010157 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02765 product CDS lipoprotein, putative:5908679 forward MW:21359 3009594 3009650 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 3010607 3010296 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02766 product CDS: Hypothetical protein 5908818:5909129 reverse MW:11433 3014509 3010613 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02767 product CDS Phosphoribosylformylglycinamidine synthase, synthetase subunit / Phosphoribosylformylglycinamidine synthase,glutamine amidotransferase subunit (EC 6.3.5.3):5913031 reverse MW:140676 3014788 3016215 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02768 product CDS Transglycosylase, Slt family:5914737 forward MW:53153 3016721 3016212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02769 product CDS tRNA-specific adenosine-34 deaminase:5915243 reverse MW:18165 3018094 3016721 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02770 product CDS Multicopper oxidase:5916616 reverse MW:50607 3021146 3018423 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02771 product CDS DNA helicase:5919653 reverse MW:101486 3022226 3023215 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02772 product CDS dipeptidase, putative:5921737 forward MW:35823 3023640 3023825 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02773 product hypothetical protein 3023837 3025132 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02774 product CDS Levansucrase:5923654 forward MW:47646 3025311 3025192 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02775 product CDS hypothetical protein:5923833 reverse MW:4619 3025352 3026533 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02776 product hypothetical protein 3027214 3026957 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02777 product hypothetical protein 3029061 3027484 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02778 product CDS GMP synthase [glutamine-hydrolyzing]:5377698 reverse MW:58144 3030654 3029185 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02779 product CDS Inosine-5'-monophosphate dehydrogenase:5379291 reverse MW:51969 3031297 3030749 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02780 product CDS ABC-type sugar transport systems, ATPase components:5379934 reverse MW:20648 3031549 3031373 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02781 product CDS: hypothetical protein 5380010:5380180 reverse MW:5862 3031576 3032967 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02782 product CDS Exodeoxyribonuclease VII large subunit:5381604 forward MW:51676 3032974 3033798 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02783 product CDS Membrane proteins related to metalloendopeptidases:5382435 forward MW:29390 3032974 3033033 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 3034179 3035849 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02784 product CDS 2-isopropylmalate synthase:5384486 forward MW:61576 3036221 3037090 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02785 product CDS Carboxyphosphonoenolpyruvate phosphonomutase:5385727 forward MW:31321 3037649 3037206 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02786 product CDS: hypothetical protein 5385843:5386286 reverse MW:14787 3038500 3037709 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02787 product CDS Possible hydrolase:5387137 reverse MW:29728 3039636 3038488 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02788 product CDS Methionine aminotransferase, PLP-dependent:5388273 reverse MW:42473 3041218 3039749 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02789 product CDS GTP-binding protein EngA:5389855 reverse MW:54863 3042510 3041356 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02790 product CDS Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO,and NlpB):5391147 reverse MW:40981 3043144 3042503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02791 product CDS protein @ FIG001046: putative membrane protein 5391140:5391781 reverse MW:22719 3044472 3043183 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02792 product CDS Histidyl-tRNA synthetase:5393109 reverse MW:47823 3045604 3044495 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02793 product CDS 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase:5394241 reverse MW:39764 3046603 3045608 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02794 product CDS: putative membrane protein 5394245:5395240 reverse MW:34559 3047361 3046603 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02795 product CDS Type IV pilus biogenesis protein PilF:5395998 reverse MW:28971 3047361 3047296 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 3048536 3047388 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02796 product CDS Ribosomal RNA large subunit methyltransferase N:5397173 reverse MW:42332 3048995 3048570 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02797 product CDS Nucleoside diphosphate kinase:5397632 reverse MW:14951 3049292 3049092 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02798 product CDS Believed to be involved in assembly of Fe-S clusters:5397929 reverse MW:7525 3049648 3049307 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02799 product CDS Ferredoxin, 2Fe-2S:5398285 reverse MW:12265 3051514 3049652 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02800 product CDS Chaperone protein HscA:5400169 reverse MW:66879 3052080 3051559 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02801 product CDS Chaperone protein HscB:5400717 reverse MW:20129 3052415 3052092 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02802 product CDS Iron binding protein IscA for iron-sulfur cluster assembly:5401052 reverse MW:11515 3052843 3052457 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02803 product CDS Iron-sulfur cluster assembly scaffold protein IscU:5401480 reverse MW:13865 3054140 3052926 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02804 product CDS Cysteine desulfurase , IscS subfamily:5402777 reverse MW:44354 3054676 3054185 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02805 product CDS Iron-sulfur cluster regulator IscR:5403283 reverse MW:16690 3055612 3054836 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02806 product CDS Serine acetyltransferase:5404249 reverse MW:27970 3056385 3055612 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02807 product CDS tRNA:Cm32/Um32 methyltransferase:5405022 reverse MW:28030 3056601 3057416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02808 product CDS Inositol-1-monophosphatase:5406053 forward MW:29563 3058023 3057484 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02809 product CDS probable exported protein 5406121:5406618 reverse MW:17139 3058023 3057952 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3059043 3058132 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02810 product CDS Protein-export membrane protein SecF (TC 3.A.5.1.1):5407680 reverse MW:32959 3060921 3059053 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02811 product CDS Protein-export membrane protein SecD (TC 3.A.5.1.1):5409558 reverse MW:67433 3061319 3060984 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02812 product CDS Preprotein translocase subunit YajC (TC 3.A.5.1.1):5409956 reverse MW:11825 3062506 3061373 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02813 product CDS tRNA-guanine transglycosylase:5411143 reverse MW:41713 3063567 3062503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02814 product CDS S-adenosylmethionine:tRNA ribosyltransferase-isomerase:5412204 reverse MW:38715 3063685 3063769 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_02815 product tRNA-Leu(caa) 3063848 3064453 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02816 product hypothetical protein 3065533 3064520 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02817 product CDS Error-prone, lesion bypass DNA polymerase V (UmuC):5414170 reverse MW:37447 3065987 3066400 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02818 product hypothetical protein 3065987 3066058 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3066904 3066614 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02819 product CDS Error-prone, lesion bypass DNA polymerase V (UmuC):5415496 reverse MW:8981 3067277 3066846 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02820 product CDS Error-prone repair protein UmuD:6047873 forward MW:15719 3067399 3068097 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02821 product CDS Gifsy-2 prophage protein:5416734 forward MW:26317 3068210 3068704 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02822 product CDS Uncharacterized protein ImpD:5417341 forward MW:17724 3069047 3068769 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02823 product CDS hypothetical protein:4154032 reverse MW:9885 3069697 3069053 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02824 product CDS: hypothetical protein 5048229:5048447 reverse MW:8425 3070585 3069791 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02825 product CDS Site-specific DNA methylase:5419222 reverse MW:30567 3071308 3070763 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02826 product CDS: Lytic enzyme 5419400:5419945 reverse MW:20158 3071410 3072219 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02827 product CDS hypothetical protein:5420856 forward MW:29884 3073390 3072347 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02828 product CDS: Phage tail protein D 5420984:5421463 reverse MW:17612 3073688 3073482 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02829 product CDS P2-like prophage tail protein X:6134815 reverse MW:7448 3074508 3073663 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02830 product CDS Phage protein U:6135365 reverse MW:20743 3076953 3074518 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02831 product CDS tail tape meausure protein:6133883 forward MW:13974 3077268 3076978 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02832 product hypothetical protein 3077709 3077407 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02833 product CDS: hypothetical protein 6083744:6084046 reverse MW:10947 3078234 3077725 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02834 product CDS Major tail tube protein:6084571 reverse MW:18480 3079410 3078247 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02835 product CDS Phage tail sheath monomer:6085609 reverse MW:37149 3080046 3079504 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02836 product CDS tail fiber assembly domain protein:6107130 reverse MW:20009 3082124 3080055 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02837 product CDS Phage tail fiber protein:6109208 reverse MW:73195 3082726 3082121 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02838 product hypothetical protein 3083609 3082728 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02839 product CDS Baseplate assembly protein J:1813248 reverse MW:31747 3083932 3083606 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02840 product CDS Baseplate assembly protein W:1813571 reverse MW:12038 3084214 3083936 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02841 product CDS: hypothetical protein 1813575:1813853 reverse MW:9672 3084820 3084257 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02842 product CDS Baseplate assembly protein V:1814459 reverse MW:19492 3085347 3084820 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02843 product CDS: hypothetical protein 1814459:1814986 reverse MW:19592 3085996 3085340 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02844 product CDS: hypothetical protein 1814979:1815635 reverse MW:24391 3086307 3085993 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02845 product CDS: hypothetical protein 1815632:1815946 reverse MW:11382 3087305 3086310 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02846 product CDS elements of external origin; phage-related functions and prophages:1816944 reverse MW:36061 3087735 3087391 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02847 product CDS: hypothetical protein 1817030:1817374 reverse MW:11959 3088883 3087732 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02848 product CDS Prophage Clp protease-like protein:1818522 reverse MW:40845 3090361 3088880 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02849 product CDS: hypothetical protein 1818519:1819946 reverse MW:53134 3090564 3090358 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02850 product CDS: hypothetical protein 1819997:1820203 reverse MW:7613 3092596 3090566 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02851 product CDS Phage terminase, large subunit:1822235 reverse MW:76034 3093170 3092601 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02852 product CDS: hypothetical protein 1822240:1822809 reverse MW:20921 3093573 3093397 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02853 product CDS: hypothetical protein 1823036:1823212 reverse MW:6509 3093931 3093545 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02854 note CDS Conserved domain protein 1823184:1823570 reverse MW:13801 product hypothetical protein 3094251 3093928 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02855 product CDS holin:1823890 reverse MW:11761 3095137 3094778 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02856 product CDS: hypothetical protein 1824417:1824776 reverse MW:13253 3097349 3095130 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02857 product CDS DNA primase domain protein:1826988 reverse MW:83063 3098077 3097559 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02858 product CDS: hypothetical protein 1827198:1827716 reverse MW:18978 3098721 3099407 CDS EC_number 3.4.21.88 gene lexA inference ab initio prediction:Prodigal:2.6 inference protein motif:HAMAP:MF_00015 locus_tag NYT1canu_02859 product LexA repressor 3099484 3099660 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02860 product CDS hypothetical protein:1829299 forward MW:6260 3099657 3100232 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02861 product CDS: hypothetical protein 1829296:1829871 forward MW:21064 3100241 3100525 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02862 product CDS: hypothetical protein 1830012:1830164 forward MW:5736 3100666 3100758 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02863 product hypothetical protein 3100755 3101078 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02864 product CDS transcriptional regulator, putative:1830717 forward MW:12134 3101129 3101548 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02865 product CDS: hypothetical protein 1831029:1831187 forward MW:5790 3101545 3102246 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02866 product hypothetical protein 3102243 3103391 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02867 product CDS Phage-related protein:1833030 forward MW:42752 3103388 3104392 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02868 product CDS Phage-related protein:1834031 forward MW:37274 3104389 3104712 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02869 product hypothetical protein 3105873 3104881 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02870 product CDS hypothetical protein:1835512 reverse MW:36440 3106787 3105954 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02871 product CDS putative integrase/recombinase:1836591 reverse MW:37471 3107295 3107705 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02872 product CDS: hypothetical protein 1836769:1837344 forward MW:21335 3108171 3108566 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02873 product CDS type III chaperone protein ShcF:1838205 forward MW:14936 3108729 3109376 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02874 product CDS type III effector HopF2:1839015 forward MW:8336 3110180 3109437 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02875 product CDS Putative lipoprotein:1839819 reverse MW:27626 3111631 3111146 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02876 product CDS hypothetical protein:1841270 reverse MW:17838 3112653 3111706 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02877 product CDS hypothetical protein:1841809 reverse MW:17229 3113859 3112900 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02878 product CDS type III effector HopPtoB1:1843207 reverse MW:24376 3116279 3113937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02879 product CDS Large exoproteins involved in heme utilization or adhesion:1845918 reverse MW:81024 3116920 3116366 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02880 product CDS RNA polymerase sigma factor RpoE:1846487 reverse MW:18536 3117164 3118270 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02881 product CDS type III secretion protein HrpJ:1847909 forward MW:40714 3118270 3120357 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02882 product CDS Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV):1849996 forward MW:76378 3120391 3121383 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02883 product CDS type III secretion protein HrpQ:1851022 forward MW:35905 3121380 3122729 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02884 product CDS Type III secretion cytoplasmic ATP synthase:1852368 forward MW:48336 3122732 3123178 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02885 product CDS type III secretion protein HrpO:1852817 forward MW:17513 3123185 3123754 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02886 product CDS type III secretion protein HrpP:1853393 forward MW:20123 3123751 3124467 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02887 product CDS type III secretion protein HrcQa:1854106 forward MW:26014 3124457 3124870 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02888 product CDS Flagellar motor switch protein FliN:1854509 forward MW:15253 3124867 3125520 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02889 product CDS Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components):1855159 forward MW:24130 3125528 3125794 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02890 product CDS Type III secretion inner membrane protein (YscS,homologous to flagellar export components):1855433 forward MW:9423 3125795 3126589 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02891 product CDS Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components):1856228 forward MW:28283 3126586 3127665 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02892 product CDS Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components):1857304 forward MW:39832 3128569 3128210 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02893 product CDS negative regulator of hrp expression HrpV:1858208 reverse MW:13912 3128775 3128572 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02894 product hypothetical protein 3128775 3128713 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 3130871 3128772 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02895 product CDS Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG):1860510 reverse MW:76732 3131304 3130873 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02896 product CDS type III secretion protein HrpG:1860943 reverse MW:15417 3131515 3131291 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02897 product CDS HrpF:1861154 reverse MW:8010 3132191 3131610 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02898 product CDS type III secretion protein HrpE:1861830 reverse MW:21310 3132757 3132227 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02899 product CDS type III secretion protein HrpD:1862396 reverse MW:20157 3133560 3132754 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02900 product CDS Type III secretion bridge between inner and outermembrane lipoprotein (yscJ,HrcJ,EscJ, PscJ):1863199 reverse MW:29166 3133560 3133495 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 3133943 3133569 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02901 product CDS type III secretion protein HrpB(Pto):1863582 reverse MW:13174 3135101 3133971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02902 product CDS type III helper protein HrpZ(Pto):1864740 reverse MW:36897 3135498 3135157 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02903 product CDS: hypothetical protein 1864796:1865137 reverse MW:11360 3136500 3135592 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02904 product CDS type III transcriptional regulator HrpS:1866139 reverse MW:33343 3137490 3136546 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02905 product CDS Pathogenicity locus probable regulatory protein hrpR:1867054 reverse MW:31951 3140055 3138568 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02906 product CDS Membrane-bound lytic murein transglycosylase D precursor:1869694 reverse MW:54235 3140276 3145579 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02907 product CDS avirulence protein AvrE(Pto):1875218 forward MW:192066 3146017 3145628 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02908 product CDS avirulence protein AvrF:1875656 reverse MW:14368 3147723 3146095 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02909 product CDS: hypothetical protein 1875734:1877362 reverse MW:57167 3148233 3147769 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02910 product CDS: hypothetical protein 1877408:1877872 reverse MW:16241 3148724 3148230 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02911 product CDS Dihydrodipicolinate synthase/N-acetylneuraminate lyase:1878393 reverse MW:19068 3149030 3150307 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02912 product CDS HrpW protein:1879946 forward MW:42893 3151851 3150391 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02913 product CDS: hypothetical protein 1880030:1881400 reverse MW:47436 3152223 3153167 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02914 note CDS conserved effector locus protein 1881862:1882806 forward MW:35230 product hypothetical protein 3153803 3153234 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02915 product hypothetical protein 3153803 3153720 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 3153923 3154966 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02916 product CDS hypothetical protein:1884605 forward MW:44990 3153923 3153976 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 18 product putative signal peptide 3155015 3155221 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02917 product hypothetical protein 3155160 3155321 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02918 product CDS: hypothetical protein 1884799:1884960 forward MW:5774 3155704 3155405 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02919 product CDS Glutathione S-transferase:1885343 reverse MW:11006 3156031 3155816 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02920 product CDS Glutathione S-transferase:1885670 reverse MW:8056 3156537 3156121 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02921 product CDS: hypothetical protein 1885760:1886176 reverse MW:15726 3156635 3156534 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02922 product hypothetical protein 3156699 3158120 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02923 product CDS Permeases of the major facilitator superfamily:1887759 forward MW:50915 3158162 3158557 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02924 product CDS Glyoxalase family protein:1888196 forward MW:14979 3158770 3160587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02925 product CDS Allophanate hydrolase:1890226 forward MW:63952 3160602 3161711 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02926 product CDS Bmp family protein:1891350 forward MW:39357 3161721 3162833 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02927 product CDS ABC transporter, permease protein:1892472 forward MW:38325 3162826 3163746 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02928 product CDS ABC transporter, permease protein:1893385 forward MW:31730 3163771 3164787 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02929 product CDS Formamidase amiF:1894426 forward MW:37255 3164793 3165479 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02930 product CDS Isochorismatase:1895118 forward MW:24704 3165482 3167017 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02931 product CDS Sugar ABC transporter, ATP-binding protein:1896656 forward MW:55652 3167014 3167691 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02932 product CDS Isochorismatase:1897330 forward MW:24262 3167691 3168086 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02933 product CDS: hypothetical protein 1897330:1897725 forward MW:14795 3168083 3168769 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02934 product CDS Transcriptional regulator, GntR family:1898408 forward MW:27005 3169031 3169327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02935 product CDS: hypothetical protein 1898670:1898966 forward MW:10704 3169031 3169093 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 3169353 3170555 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02936 product CDS: hypothetical protein 1898992:1900194 forward MW:45045 3170543 3176011 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02937 product CDS Superfamily I DNA and RNA helicases and helicase subunits:1905650 forward MW:204735 3176387 3178522 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02938 product CDS sensory box/GGDEF domain/EAL domain protein:1908161 forward MW:84598 3179920 3178550 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02939 product CDS Gluconate transporter family protein:1909559 reverse MW:47352 3180284 3181561 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02940 product CDS FOG: PAS/PAC domain:1911200 forward MW:46900 3182560 3181583 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02941 product CDS Gluconolactonase:1912199 reverse MW:35055 3182560 3182510 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 17 product putative signal peptide 3183189 3182617 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02942 product CDS: hypothetical protein 1912256:1912828 reverse MW:20229 3183189 3183118 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3185034 3183295 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02943 product CDS Xaa-His dipeptidase:1914673 reverse MW:62737 3185034 3184951 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 3185331 3186311 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02944 note CDS conserved domain protein 1914970:1915950 forward MW:35974 product hypothetical protein 3186379 3187347 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02945 product CDS: hypothetical protein 1916018:1916986 forward MW:36550 3187663 3188382 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02946 product CDS Carbonic anhydrase:1918021 forward MW:25386 3187663 3187761 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 33 product putative signal peptide 3188580 3189767 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02947 product CDS Permeases of the major facilitator superfamily:1919406 forward MW:42604 3190434 3189835 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02948 product CDS Superoxide dismutase [Cu-Zn] precursor:1920073 reverse MW:20461 3191605 3190595 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02949 product CDS Alcohol dehydrogenase:1921244 reverse MW:35765 3191970 3191662 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02950 product CDS Transcriptional regulator, ArsR family:1921597 reverse MW:11035 3192132 3192923 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02951 product CDS Cyclohexadienyl dehydratase (EC 4.2.1.91):1922562 forward MW:29133 3192132 3192200 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 3193043 3194695 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02952 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):1924334 forward MW:58168 3194845 3195840 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02953 product CDS Chromosome segregation ATPases:1925479 forward MW:37191 3196923 3195904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02954 product CDS Branched-chain amino acid aminotransferase:1926562 reverse MW:37038 3197704 3197063 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02955 product CDS acetyltransferase, CysE/LacA/LpxA/NodL family:1927343 reverse MW:23845 3198632 3197748 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02956 product CDS alpha-1,6-rhamnosyltransferase:1928268 reverse MW:33638 3199777 3198890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02957 product CDS Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB:1929416 reverse MW:32388 3200120 3199788 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02958 product CDS Cytochrome O ubiquinol oxidase subunit IV:1929714 reverse MW:10773 3200752 3200120 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02959 product CDS Cytochrome O ubiquinol oxidase subunit III:1930391 reverse MW:23123 3202768 3200756 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02960 product CDS Cytochrome O ubiquinol oxidase subunit I:1932407 reverse MW:74481 3203713 3202772 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02961 product CDS Cytochrome O ubiquinol oxidase subunit II:1933301 reverse MW:32505 3204688 3204179 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02962 product CDS Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation:1934327 reverse MW:18213 3205331 3206227 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02963 product CDS Chemotaxis protein CheV:1935866 forward MW:33849 3206182 3206763 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02964 product CDS Acetyltransferase, GNAT family:1936402 forward MW:17414 3206878 3207630 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02965 product CDS: hypothetical protein 1936571:1937269 forward MW:25451 3208975 3207977 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02966 product CDS probable exported protein 1937616:1938614 reverse MW:36089 3208975 3208895 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 3209759 3208977 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02967 product CDS Sigma-fimbriae chaperone protein:1939398 reverse MW:28775 3209759 3209685 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 3212326 3209756 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02968 product CDS Outer membrane usher protein FIMD:1941869 reverse MW:88637 3213171 3212458 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02969 product CDS Probable pilin chaperone:1942849 reverse MW:27272 3213858 3213274 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02970 product CDS Fimbrial protein precursor:1943497 reverse MW:19732 3213858 3213784 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 3214548 3214171 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02971 product CDS: hypothetical protein 1943810:1944199 reverse MW:13580 3214841 3216007 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02972 product CDS Probable Co/Zn/Cd efflux system membrane fusion protein:1945646 forward MW:41579 3216004 3219108 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02973 product CDS Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA:1948747 forward MW:110794 3219119 3219796 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02974 product CDS DNA-binding heavy metal response regulator:1949435 forward MW:25202 3219786 3221150 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02975 product CDS Heavy metal sensor histidine kinase:1950789 forward MW:50241 3221354 3222862 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02976 product CDS GGDEF domain protein:1952501 forward MW:53658 3223433 3222957 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02977 product CDS: hypothetical protein 1952596:1953072 reverse MW:17140 3223578 3223892 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02978 product CDS: hypothetical protein 1953229:1953531 forward MW:11521 3224023 3223868 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_02979 product hypothetical protein 3224697 3224023 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02980 product CDS 4-Hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14):1954336 reverse MW:23876 3225437 3224724 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02981 product CDS 6-phosphogluconolactonase , eukaryotic type:1955076 reverse MW:25046 3226893 3225424 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02982 product CDS Glucose-6-phosphate 1-dehydrogenase:1956532 reverse MW:55468 3227112 3227978 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02983 product CDS Phosphogluconate repressor HexR, RpiR family:1957617 forward MW:31365 3229268 3228393 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02984 product CDS Aldose 1-epimerase:1958907 reverse MW:32813 3230743 3229382 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02985 product CDS Glucose-selective porin OprB:1960382 reverse MW:50288 3230743 3230642 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 34 product putative signal peptide 3232037 3230877 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02986 product CDS Glucose ABC transporter, ATP-binding subunit:1961676 reverse MW:42139 3232885 3232040 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02987 product CDS Glucose ABC transport system, inner membrane component 2:1962524 reverse MW:30559 3233786 3232878 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02988 product CDS Glucose ABC transport system, inner membrane component 1:1963425 reverse MW:33653 3235177 3233891 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02989 product CDS Glucose ABC transport system, periplasmic sugar-binding protein:1964816 reverse MW:45681 3235177 3235106 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3236755 3235349 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02990 product CDS Integral membrane sensor signal transduction histidine kinase , glucose catabolism cluster:1966487 reverse MW:55642 3237554 3236817 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02991 product CDS DNA-binding response regulator GltR, controls specific porins for the entry of glucose:1967193 reverse MW:27651 3238570 3237605 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02992 product CDS Glucokinase:1968209 reverse MW:34314 3240393 3238567 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02993 product CDS Phosphogluconate dehydratase:1970032 reverse MW:65390 3240613 3241614 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02994 product CDS NAD-dependent glyceraldehyde-3-phosphate dehydrogenase:1971253 forward MW:36260 3241693 3242256 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02995 product CDS RNA polymerase sigma-70 factor, ECF subfamily:1971895 forward MW:19225 3242324 3243289 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02996 product CDS Sigma factor regulatory protein, FecR/PupR family:1972928 forward MW:35359 3243410 3245983 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02997 product CDS TonB-dependent hemin , ferrichrome receptor:1975622 forward MW:93881 3243410 3243520 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 37 product putative signal peptide 3246114 3246728 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02998 product CDS Heme oxygenase HemO, associated with heme uptake:1976367 forward MW:22113 3246725 3247183 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_02999 note CDS Hypothetical protein DUF454 1976364:1976822 forward MW:16985 product hypothetical protein 3247288 3247644 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03000 product CDS Acetyl-CoA carboxylase alpha subunit:1977283 forward MW:13613 3247934 3249442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03001 product CDS probable transcriptional regulator:1979081 forward MW:54829 3249614 3251344 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03002 product CDS Signal transduction histidine kinase:1980983 forward MW:63961 3251329 3251718 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03003 product CDS FOG: CheY-like receiver:1981357 forward MW:14256 3251728 3253845 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03004 product CDS Sensory box/GGDEF family protein:1983484 forward MW:78281 3254150 3254533 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03005 product CDS Glycine cleavage system H protein:1984172 forward MW:13842 3254544 3257408 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03006 product CDS Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein):1987047 forward MW:103637 3257476 3258600 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03007 product CDS Aminomethyltransferase (glycine cleavage system T protein):1988239 forward MW:40407 3258852 3259273 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03008 product cspA 3259004 3259216 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03009 product CDS Cold shock protein CspA:1988855 forward MW:7670 3260404 3259343 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03010 product CDS: Predicted Permease 1988982:1990043 reverse MW:38664 3261518 3260391 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03011 product CDS: Predicted permease 1990030:1991157 reverse MW:41556 3261837 3263327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03012 product CDS Cytosol aminopeptidase PepA:1992966 forward MW:52349 3263386 3263814 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03013 product CDS DNA polymerase III chi subunit:1993453 forward MW:16203 3263822 3264247 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03014 product CDS: hypothetical protein 1993461:1993886 forward MW:15780 3264447 3264343 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03015 product CDS YD repeat protein:1994140 reverse MW:5964 3264615 3267461 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03016 product CDS Valyl-tRNA synthetase:1997100 forward MW:107068 3267525 3268550 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03017 product CDS Ribosomal RNA large subunit methyltransferase F:1998189 forward MW:36009 3269275 3268679 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03018 product CDS Transposase:6130746 forward MW:30021 3270030 3269515 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03019 product CDS ISPsy8, transposase OrfA:6129910 forward MW:19998 3270702 3270421 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03020 product CDS DNA-binding protein HU form N:605536 reverse MW:9801 3271095 3272096 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03021 product CDS Nucleoid-associated protein:606930 forward MW:37369 3272103 3272453 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03022 product CDS Glutaredoxin NrdH:607287 forward MW:13174 3273568 3272636 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03023 product CDS Glutathione S-transferase:608402 reverse MW:33951 3273950 3273633 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03024 product CDS Endo/excinuclease domain protein:608784 reverse MW:11484 3274434 3273943 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03025 product CDS Ketosteroid isomerase-related protein:609268 reverse MW:18550 3275737 3274508 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03026 product CDS Cyanate MFS transporter:610496 reverse MW:40148 3276670 3275906 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03027 product CDS ABC-type polar amino acid transport system, ATPase component:611504 reverse MW:28883 3277778 3276681 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03028 product CDS Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4):612612 reverse MW:40556 3278970 3277789 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03029 product CDS Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4):613804 reverse MW:43187 3280069 3279041 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03030 product CDS Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4):614903 reverse MW:36698 3280069 3279992 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 3280554 3281213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03031 product CDS phospholipase/carboxylesterase family protein:616047 forward MW:24194 3281329 3282789 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03032 product CDS ATP-dependent RNA helicase RhlB:617623 forward MW:53516 3283532 3282870 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03033 product CDS lipoprotein, putative:618366 reverse MW:22900 3283532 3283458 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 3283900 3283529 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03034 product CDS Probable lipoprotein:618740 reverse MW:13833 3284611 3283928 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03035 product CDS CsgG family protein:619505 reverse MW:26572 3284611 3284519 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 3285287 3284841 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03036 product CDS Molybdenum cofactor biosynthesis protein MoaE; Molybdopterin converting factor subunit 2:620121 reverse MW:16446 3285535 3285290 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03037 product CDS Molybdenum cofactor biosynthesis protein MoaD; Molybdopterin converting factor subunit 1:620369 reverse MW:9271 3286017 3285532 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03038 product CDS Molybdenum cofactor biosynthesis protein MoaC:620851 reverse MW:16845 3287609 3286215 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03039 product CDS Predicted ATPase related to phosphate starvation-inducible protein PhoH:622436 reverse MW:51934 3289082 3287904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03040 product CDS polysaccharide deacetylase family protein:623891 reverse MW:44032 3289082 3289026 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 3289273 3290052 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03041 note CDS UPF0246 protein YaaA 624100:624879 forward MW:29472 product hypothetical protein 3290863 3292179 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03042 product CDS GDP-mannose 6-dehydrogenase:627006 forward MW:47740 3292282 3293763 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03043 product CDS Alginate biosynthesis protein Alg8:628590 forward MW:55977 3293804 3294976 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03044 product CDS Alginate biosynthesis protein alg44:629803 forward MW:41816 3294979 3296391 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03045 product CDS Alginate biosynthesis protein AlgK precursor:631218 forward MW:51171 3296388 3297869 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03046 product CDS outer membrane protein AlgE:632696 forward MW:54957 3296388 3296465 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 3297896 3299506 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03047 product CDS Poly(beta-D-mannuronate) C5 epimerase precursor:634333 forward MW:59543 3297896 3298006 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 37 product putative signal peptide 3299503 3300960 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03048 product CDS Alginate biosynthesis protein AlgX:635787 forward MW:53396 3299503 3299604 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 34 product putative signal peptide 3300969 3302105 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03049 product CDS Alginate lyase precursor:636932 forward MW:42500 3300969 3301055 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 3302292 3303848 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03050 product CDS Probable poly(beta-D-mannuronate) O-acetylase:638675 forward MW:58606 3303859 3305034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03051 product CDS alginate biosynthesis protein AlgJ:639861 forward MW:42969 3305047 3305715 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03052 product CDS alginate o-acetyltransferase AlgF:640542 forward MW:23319 3305047 3305151 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 35 product putative signal peptide 3305843 3307294 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03053 product CDS Mannose-6-phosphate isomerase / Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22):642121 forward MW:53563 3310168 3307400 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03054 product CDS Rhs family protein:644995 reverse MW:103280 3313192 3310472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03055 product CDS Rhs family protein:648019 reverse MW:101245 3313397 3313861 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03056 product CDS Permeases of the drug/metabolite transporter (DMT) superfamily:648688 forward MW:16990 3313878 3314696 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03057 product CDS Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases):649523 forward MW:28736 3314962 3314768 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03058 product CDS Fusaric acid resistance protein fusE:649789 reverse MW:7116 3316957 3316328 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03059 product CDS L-lysine permease:5514802 forward MW:22148 3317413 3317952 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03060 product CDS: hypothetical protein 5652756:5653694 reverse MW:33419 3318793 3317933 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03061 product CDS Fusaric acid resistance protein fusE:653620 reverse MW:32077 3319019 3318819 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03062 product CDS Na+-dependent transporters of the SNF family:653846 reverse MW:7672 3321195 3319009 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03063 product CDS: hypothetical protein 653836:656022 reverse MW:81033 3322688 3321192 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03064 product CDS Outer membrane protein:657515 reverse MW:53607 3322873 3323820 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03065 product CDS Putative transcriptional regulator LYSR-type:658647 forward MW:34460 3323908 3324882 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03066 product CDS Glyoxylate reductase / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81);2-ketoaldonate reductase, broad specificity (EC 1.1.1.215)(EC 1.1.1.-):659709 forward MW:36630 3325836 3324934 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03067 product CDS Permease of the drug/metabolite transporter (DMT) superfamily:660663 reverse MW:32578 3325973 3326848 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03068 product CDS Transcriptional regulator, AraC family:661675 forward MW:32555 3327169 3326837 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03069 product CDS: iron uptake protein 661664:661996 reverse MW:11916 3328734 3327169 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03070 product CDS: iron-regulated membrane protein 661996:663561 reverse MW:57655 3329075 3328731 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03071 product CDS: iron uptake protein 663558:663902 reverse MW:12215 3329127 3329780 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03072 product CDS RNA polymerase sigma-70 factor, ECF subfamily:664607 forward MW:18778 3329777 3330754 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03073 product CDS Fe2+-dicitrate sensor, membrane component:665581 forward MW:35373 3331282 3333630 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03074 product CDS Iron(III) dicitrate transport protein FecA:668457 forward MW:85393 3331282 3331395 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 38 product putative signal peptide 3336282 3333781 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03075 product CDS Ferrichrome-iron receptor:671109 reverse MW:90301 3336282 3336202 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 3336531 3336959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03076 product CDS ribosomal subunit interface protein, putative:671786 forward MW:15977 3338013 3337051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03077 product CDS regulatory protein, putative:672810 reverse MW:33889 3338552 3338010 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03078 product CDS Sigma factor, ECF subfamily:673379 reverse MW:20323 3338717 3339049 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03079 product CDS: hypothetical protein 673544:673876 forward MW:11990 3339294 3339626 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03080 product CDS lipoprotein, putative:674453 forward MW:10316 3340183 3339695 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03081 product CDS: hypothetical protein 674522:674974 reverse MW:16232 3340611 3340877 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03082 product CDS: hypothetical protein 675438:675704 forward MW:9742 3341582 3342832 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03083 product CDS UDP-N-acetylglucosamine 2-epimerase:677659 forward MW:46183 3343000 3345213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03084 product CDS: hypothetical protein 677827:680040 forward MW:78309 3343000 3343095 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 3345226 3347346 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03085 product CDS bacteriophage N4 adsorption protein B:682173 forward MW:81551 3347343 3349307 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03086 product CDS FOG: TPR repeat:684134 forward MW:72448 3347343 3347414 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3349339 3350211 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03087 product CDS: hypothetical protein 684166:685038 forward MW:31728 3350294 3351097 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03088 product CDS Protein sirB1:685924 forward MW:30341 3351866 3351309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03089 product CDS: hypothetical protein 686136:686681 reverse MW:20447 3352973 3352062 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03090 product CDS Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases):687800 reverse MW:32041 3353538 3353086 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03091 product CDS Hypothetical flavoprotein YqcA (clustered with tRNA pseudouridine synthase C):688365 reverse MW:15832 3353726 3354331 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03092 product CDS: hypothetical protein 688553:689158 forward MW:23345 3354483 3355055 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03093 product CDS putative membrane protein:689882 forward MW:21321 3355161 3356000 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03094 product CDS FolM Alternative dihydrofolate reductase 1:690827 forward MW:29740 3356022 3356585 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03095 product CDS GTP cyclohydrolase I type 1:691412 forward MW:20914 3356585 3356956 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03096 product CDS Dihydroneopterin triphosphate epimerase:691783 forward MW:13961 3357000 3357296 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03097 note CDS protein of unknown function DUF1244 691827:692123 forward MW:11353 product hypothetical protein 3357289 3357630 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03098 product CDS Type III effector HopPmaJ:692457 forward MW:12130 3358823 3357861 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03099 product CDS Thioredoxin reductase:693650 reverse MW:33823 3359181 3359942 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03100 product CDS Sulfate transport system protein cysZ:694769 forward MW:28487 3360128 3360472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03101 note CDS Conserved domain protein 694955:695299 forward MW:12475 product hypothetical protein 3361166 3360570 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03102 product CDS membrane protein, putative:695993 reverse MW:21713 3361485 3361784 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03103 product CDS: hypothetical protein 696312:696611 forward MW:11008 3361864 3363075 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03104 product CDS Glycosyl transferase, group 1 family protein:697902 forward MW:45073 3364147 3363044 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03105 product CDS 2,4-dienoyl-CoA reductase [NADPH]:698974 reverse MW:40052 3364818 3364330 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03106 product CDS Glutathione peroxidase family protein:699645 reverse MW:17689 3365187 3364948 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03107 product CDS FKBP-type peptidyl-prolyl cis-trans isomerase SlyD:700260 reverse MW:16866 3365433 3365263 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03108 product CDS FKBP-type peptidyl-prolyl cis-trans isomerase SlyD:700260 reverse MW:16866 3365831 3367921 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03109 product CDS Phosphate acetyltransferase:702748 forward MW:75312 3367986 3368891 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03110 product CDS Acyltransferase family protein:703718 forward MW:34972 3369683 3368994 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03111 product CDS Outer membrane protein:704510 reverse MW:23783 3369683 3369612 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3370723 3369797 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03112 product CDS Branched-chain amino acid ABC transporter, permease protein:705550 reverse MW:32468 3371844 3370723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03113 product CDS Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1):706617 reverse MW:38784 3373348 3371837 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03114 product CDS Sugar ABC transporter, ATP-binding protein:708175 reverse MW:54130 3374436 3373345 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03115 product CDS Bmp family protein:709263 reverse MW:38838 3374436 3374362 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 3375398 3374670 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03116 product CDS Transcriptional regulator RutR of pyrimidine catabolism (TetR family):710219 reverse MW:27013 3375658 3376740 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03117 product CDS Predicted monooxygenase RutA in novel pyrimidine catabolism pathway:711567 forward MW:39486 3376740 3377480 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03118 product CDS Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway:712307 forward MW:26591 3377491 3377874 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03119 product CDS Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway:712701 forward MW:13688 3377932 3378711 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03120 product CDS Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway:713538 forward MW:28595 3378724 3379266 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03121 product CDS Predicted flavin reductase RutF in novel pyrimidine catabolism pathway:714093 forward MW:18867 3379566 3380753 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03122 product CDS HDIG domain protein:715580 forward MW:43667 3383503 3380771 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03123 product CDS Transcriptional regulator, LuxR family:718330 reverse MW:101960 3385125 3383755 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03124 product CDS: hypothetical protein 718582:719952 reverse MW:50699 3385125 3385045 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 3387085 3385148 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03125 product CDS: hypothetical protein 719975:721912 reverse MW:69862 3387085 3386996 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 3389077 3387395 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03126 product CDS Medium-chain-fatty-acid--CoA ligase:723904 reverse MW:62404 3389900 3389268 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03127 product CDS L-lysine permease:724727 reverse MW:22232 3390137 3391135 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03128 product CDS Ribosomal RNA small subunit methyltransferase C:725962 forward MW:36019 3391175 3391368 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03129 product yybP-ykoY 3391382 3391966 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03130 product CDS Probable transmembrane protein:726793 forward MW:20747 3392841 3392023 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03131 product CDS Zn-dependent protease with chaperone function:727668 reverse MW:29221 3392841 3392776 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 3393654 3393025 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03132 product CDS: hypothetical protein 727852:728481 reverse MW:23259 3393654 3393607 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 16 product putative signal peptide 3393943 3393683 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03133 product CDS: hypothetical protein 728510:728770 reverse MW:9267 3394125 3393943 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03134 product CDS Restriction endonuclease:728952 reverse MW:6831 3394232 3395395 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03135 product CDS Glycerol-3-phosphate O-acyltransferase:730222 forward MW:43566 3395702 3395908 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03136 product CDS: hypothetical protein 730529:730735 forward MW:7872 3396570 3395989 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03137 product CDS lipoprotein, putative:731397 reverse MW:20385 3396570 3396499 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3396799 3397032 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03138 product CDS: hypothetical protein 731626:731859 forward MW:8808 3397752 3399260 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03139 product CDS Malate:quinone oxidoreductase:734087 forward MW:54756 3400275 3399343 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03140 product CDS Homocysteine S-methyltransferase:735066 reverse MW:31533 3400350 3401171 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03141 product CDS Amino acid ABC transporter, periplasmic amino acid-binding protein:735998 forward MW:29977 3400350 3400418 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 3401168 3402001 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03142 product CDS Amino acid ABC transporter, permease protein:736828 forward MW:30528 3402472 3402185 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03143 product CDS Aminopeptidase N:737299 reverse MW:11138 3403033 3402539 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03144 product CDS: hypothetical protein 737366:737860 reverse MW:18144 3403033 3402971 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 3403657 3403100 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03145 product CDS Hypoxanthine-guanine phosphoribosyltransferase:738484 reverse MW:20663 3403865 3404503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03146 product CDS Uracil phosphoribosyltransferase:739330 forward MW:22936 3404508 3405785 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03147 product CDS Uracil permease:740612 forward MW:44570 3406917 3405895 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03148 product CDS Ferrochelatase, protoheme ferro-lyase:741744 reverse MW:38414 3407843 3406941 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03149 product CDS Cell division inhibitor:742670 reverse MW:33042 3408131 3409117 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03150 product CDS: Amine oxidase, flavin-containing 742958:743944 forward MW:35839 3409114 3409329 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03151 product CDS: hypothetical protein 743941:744156 forward MW:8480 3409618 3410580 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03152 note CDS COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA 744496:745407 forward MW:34062 product hypothetical protein 3410586 3411494 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03153 product CDS Transcriptional regulator, MerR family, associated with photolyase:746321 forward MW:33843 3411504 3412952 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03154 product CDS Deoxyribodipyrimidine photolyase:747779 forward MW:54705 3412945 3413367 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03155 product CDS: Putative transcriptional regulator 747772:748194 forward MW:16400 3413364 3414152 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03156 product CDS Oxidoreductase, short-chain dehydrogenase/reductase family:748979 forward MW:28691 3414149 3415396 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03157 product CDS: Amine oxidase, flavin-containing 748976:750223 forward MW:46432 3415393 3416193 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03158 product CDS: Hypothetical protein 750220:751020 forward MW:30292 3416180 3417448 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03159 product CDS S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase:752275 forward MW:47469 3417441 3417944 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03160 product CDS: Hypothetical protein 752256:752771 forward MW:18349 3418052 3418273 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03161 product CDS: hypothetical protein 752879:753100 forward MW:8337 3419111 3418593 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03162 product CDS Lipid A 3-O-deacylase:753938 reverse MW:19086 3419111 3419040 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3420067 3419231 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03163 product CDS Glutamate racemase:754885 reverse MW:29604 3420830 3420051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03164 product CDS Molybdopterin biosynthesis protein MoeB:755648 reverse MW:27039 3421648 3420815 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03165 product CDS Methylase of polypeptide chain release factors:756475 reverse MW:30441 3422731 3421649 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03166 product CDS Peptide chain release factor 1:757558 reverse MW:40040 3424005 3422728 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03167 product CDS Glutamyl-tRNA reductase:758832 reverse MW:46089 3424289 3425959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03168 product CDS: TPR domain protein 759116:760786 forward MW:62228 3425964 3426581 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03169 product CDS Outer membrane lipoprotein LolB precursor:761408 forward MW:22902 3425964 3426050 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 3426578 3427432 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03170 product CDS 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase:762259 forward MW:30497 3427471 3427545 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03171 product tRNA-Gln(ttg) 3427600 3428532 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03172 product CDS Ribose-phosphate pyrophosphokinase:763359 forward MW:33802 3428670 3429281 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03173 product CDS LSU ribosomal protein L25p:764108 forward MW:21682 3429446 3430030 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03174 product CDS Peptidyl-tRNA hydrolase:764857 forward MW:20933 3430052 3431152 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03175 product CDS GTP-binding and nucleic acid-binding protein YchF:765979 forward MW:40006 3431379 3432533 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03176 product CDS dTDP-glucose 4,6-dehydratase:767360 forward MW:40314 3432533 3433438 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03177 product CDS dTDP-4-dehydrorhamnose reductase:768265 forward MW:32759 3433435 3434325 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03178 product CDS Glucose-1-phosphate thymidylyltransferase:769152 forward MW:32783 3434367 3435296 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03179 product CDS Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase:770123 forward MW:33733 3435882 3435691 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03180 product hypothetical protein 3435967 3436512 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03181 product CDS dTDP-4-dehydrorhamnose 3,5-epimerase:771339 forward MW:20494 3436512 3437339 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03182 product CDS O-antigen export system permease protein RfbD:772166 forward MW:27424 3437329 3438693 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03183 product CDS Teichoic acid export ATP-binding protein TagH:773520 forward MW:49950 3438686 3443443 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03184 product CDS Glycosyl transferase, group 2 family protein:778270 forward MW:176923 3443507 3445375 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03185 product CDS: hypothetical protein 778334:780202 forward MW:67924 3445390 3446493 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03186 product CDS UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase:781320 forward MW:39389 3446496 3447440 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03187 product CDS Glycosyltransferase:782267 forward MW:35607 3447427 3448377 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03188 product CDS Bifunctional acetyl transferase/isomerase:783204 forward MW:34544 3448385 3448789 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03189 product CDS sugar translocase:783616 forward MW:15406 3450939 3448885 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03190 product CDS Glycosyl transferase, group 2 family protein:785766 reverse MW:77346 3452523 3451714 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03191 product CDS glycosyl transferase, group 1:787947 reverse MW:52245 3453511 3452498 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03192 product hypothetical protein 3455221 3454322 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03193 product CDS Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase:788951 reverse MW:33789 3457569 3455512 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03194 product CDS Methyl-accepting chemotaxis protein:791401 reverse MW:77447 3457913 3459034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03195 product CDS DnaJ domain protein:792764 forward MW:43851 3459152 3459228 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03196 product tRNA-Met(cat) 3459663 3459830 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03197 product CDS Integrase:793560 forward MW:11755 3460114 3460356 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03198 product hypothetical protein 3460515 3460847 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03199 product CDS: hypothetical protein 794245:794577 forward MW:11733 3460515 3460571 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 3461020 3462165 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03200 product CDS DNA-binding protein, putative:795895 forward MW:43665 3462152 3462628 CDS EC_number 3.1.-.- gene vapC inference ab initio prediction:Prodigal:2.6 inference protein motif:HAMAP:MF_00265 locus_tag NYT1canu_03201 product tRNA(fMet)-specific endonuclease VapC 3463872 3462754 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03202 product CDS ISPsy5, transposase:797602 reverse MW:42248 3464286 3463888 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03203 product CDS ISPsy5, transposase:798016 reverse MW:14933 3464662 3464303 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03204 product CDS ISPsy5, Orf1:798392 reverse MW:14293 3464835 3465446 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03205 product CDS hypothetical protein:799176 forward MW:14173 3464835 3464888 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 18 product putative signal peptide 3465567 3465830 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03206 product CDS hypothetical protein:799560 forward MW:9638 3465567 3465641 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 3467839 3465959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03207 product CDS Methyl-accepting chemotaxis protein:801569 reverse MW:66844 3468197 3470119 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03208 product CDS Methyl-accepting chemotaxis protein:803849 forward MW:69352 3470283 3470522 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03209 product CDS: hypothetical protein 804013:804252 forward MW:8748 3470522 3470932 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03210 product CDS: hypothetical protein 804264:804662 forward MW:14763 3471748 3470984 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03211 product CDS 2-deoxy-D-gluconate 3-dehydrogenase:805478 reverse MW:26635 3472214 3473482 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03212 product CDS PhaK-like protein:807212 forward MW:46483 3473661 3474488 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03213 product CDS UDP-glucose 4-epimerase:808218 forward MW:30646 3474545 3475429 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03214 product CDS gluconolactonase family protein:809159 forward MW:31979 3475486 3476511 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03215 product CDS TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein:810241 forward MW:37545 3475486 3475560 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 3476575 3477102 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03216 product CDS TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter:810832 forward MW:19289 3477103 3478383 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03217 product CDS TRAP-type C4-dicarboxylate transport system, large permease component:812113 forward MW:45196 3478467 3479438 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03218 product CDS membrane protein, putative:813168 forward MW:34375 3479413 3480294 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03219 product CDS Aldose 1-epimerase:814024 forward MW:32274 3480408 3480638 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03220 product CDS VapB protein (antitoxin to VapC):814368 forward MW:8593 3480638 3481042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03221 product CDS VapC toxin protein:814772 forward MW:14814 3481792 3481226 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03222 product CDS: hypothetical protein 814956:815096 reverse MW:4647 3482030 3482638 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03223 product CDS RNA polymerase sigma-70 factor:816368 forward MW:18772 3482638 3483300 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03224 product CDS: hypothetical protein 816368:817030 forward MW:24236 3484578 3483322 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03225 product CDS 5-Enolpyruvylshikimate-3-phosphate synthase:818281 reverse MW:42693 3485156 3484674 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03226 product CDS diguanylate cyclase (GGDEF domain) with PAS/PAC sensor:818886 reverse MW:18409 3486164 3485160 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03227 product CDS Chemotaxis protein CheC -- inhibitor of MCP methylation:819894 reverse MW:35737 3486294 3486175 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03228 product CDS hypothetical protein:820024 reverse MW:4452 3486455 3486904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03229 product CDS putative phosphatase/kinase:820634 forward MW:16863 3486901 3487362 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03230 product CDS: hypothetical protein 820631:821092 forward MW:16837 3487595 3489643 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03231 product CDS Colicin:823373 forward MW:73499 3489645 3489917 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03232 product hypothetical protein 3491167 3490016 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03233 product CDS cell morphology protein:824897 reverse MW:40992 3492594 3491179 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03234 product CDS Probable poly(beta-D-mannuronate) O-acetylase:826324 reverse MW:52730 3493287 3492613 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03235 product CDS cell morphology protein:827017 reverse MW:23111 3493287 3493219 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 3493949 3493284 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03236 product CDS Cell morphology protein:827628 reverse MW:21337 3497861 3493965 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03237 product CDS Cellulose synthase operon protein C:831591 reverse MW:140256 3497861 3497790 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3499048 3497837 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03238 product CDS Endoglucanase precursor:832778 reverse MW:44389 3499048 3498959 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 3501307 3499052 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03239 product CDS Cyclic di-GMP binding protein precursor:834896 reverse MW:76560 3501307 3501197 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 37 product putative signal peptide 3503541 3501322 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03240 product CDS Cellulose synthase catalytic subunit [UDP-forming]:837271 reverse MW:82483 3504677 3503538 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03241 product CDS Cellulose synthase, putative:838407 reverse MW:40588 3506150 3504960 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03242 product CDS Membrane-bound lytic murein transglycosylase A precursor:839892 reverse MW:42636 3506150 3506079 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3507498 3506230 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03243 product CDS Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases:841228 reverse MW:46534 3507498 3507406 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 3508212 3507562 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03244 product CDS MotA/TolQ/ExbB proton channel family protein:841942 reverse MW:23506 3510521 3508239 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03245 product CDS TonB-dependent receptor:844251 reverse MW:83783 3510521 3510453 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 3511318 3510542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03246 product CDS Ferric siderophore transport system, periplasmic binding protein TonB:845048 reverse MW:27806 3511725 3511318 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03247 product CDS Biopolymer transport protein ExbD/TolR:845455 reverse MW:14816 3511925 3512488 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03248 product CDS Acetyltransferase, GNAT family:846218 forward MW:20747 3512485 3514056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03249 product CDS Phosphodiesterase/alkaline phosphatase D:847786 forward MW:57801 3514211 3514837 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03250 product CDS Nicotinamidase family protein YcaC:848567 forward MW:22963 3515174 3514641 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03251 product hypothetical protein 3516809 3515421 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03252 product CDS FOG: PAS/PAC domain:850464 reverse MW:47984 3516966 3517925 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03253 product CDS NAD-dependent epimerase/dehydratase:851655 forward MW:34635 3519049 3518003 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03254 product CDS GDP-mannose 4,6 dehydratase:852779 reverse MW:39073 3519393 3520589 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03255 product CDS GGDEF domain protein:854319 forward MW:44323 3520665 3521102 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03256 product CDS GCN5-related N-acetyltransferase:854832 forward MW:16747 3522751 3521111 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03257 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):856481 reverse MW:57818 3523030 3525045 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03258 product CDS: hypothetical protein 856760:858775 forward MW:75670 3525132 3525851 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03259 product CDS Phosphatidylcholine synthase:859581 forward MW:26680 3527137 3525914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03260 product CDS major facilitator family transporter:860867 reverse MW:42756 3527857 3527483 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03261 product CDS Alkylphosphonate utilization operon protein PhnA:861554 reverse MW:12098 3528076 3530079 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03262 product CDS O-antigen acetylase:863809 forward MW:73460 3530155 3530814 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03263 product CDS HD domain protein:864544 forward MW:26444 3530922 3532595 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03264 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):866325 forward MW:57360 3533246 3532608 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03265 product CDS Carbonic anhydrase:866976 reverse MW:24121 3533481 3533888 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03266 product CDS Phosphotransferase system, HPr-related proteins:867618 forward MW:14798 3534353 3533898 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03267 product CDS Ribosomal-protein-S18p-alanine acetyltransferase:868083 reverse MW:17407 3535149 3534346 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03268 product CDS Periplasmic protein TonB, links inner and outer membranes:868879 reverse MW:29282 3535295 3536572 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03269 product CDS: hypothetical protein 869025:870302 forward MW:49058 3536562 3537269 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03270 product CDS: hypothetical protein 870292:870999 forward MW:26970 3537266 3540085 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03271 product CDS Chromosome segregation ATPases:873815 forward MW:105510 3540305 3540144 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03272 product CDS hypothetical protein:874035 reverse MW:6193 3540519 3540410 rRNA locus_tag NYT1canu_03273 product 5S ribosomal RNA score 2.4e-13 3543571 3540682 rRNA locus_tag NYT1canu_03274 product 23S ribosomal RNA score 0 3543892 3543817 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03275 product tRNA-Ala(tgc) 3544013 3543937 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03276 product tRNA-Ile(gat) 3545644 3544111 rRNA locus_tag NYT1canu_03277 product 16S ribosomal RNA score 0 3546779 3546147 CDS gene msrQ inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P76343 locus_tag NYT1canu_03278 product Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ 3547792 3546779 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03279 product CDS Putative sulfite oxidase subunit YedY:3861603 reverse MW:37953 3548708 3547857 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03280 product CDS CDP-diacylglycerol--serine O-phosphatidyltransferase:3862519 reverse MW:30278 3549869 3548853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03281 product CDS Ketol-acid reductoisomerase:3863680 reverse MW:36384 3550408 3549917 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03282 product CDS Acetolactate synthase small subunit:3864219 reverse MW:17782 3552135 3550411 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03283 product CDS Acetolactate synthase large subunit:3865946 reverse MW:62638 3552533 3552949 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03284 product CDS Glycosyltransferase:3866760 forward MW:15296 3552533 3552589 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 3553288 3552959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03285 product CDS Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C):3867099 reverse MW:12599 3554028 3553288 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03286 product CDS FOG: TPR repeat:3867839 reverse MW:25156 3556367 3554046 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03287 product CDS Multimodular transpeptidase-transglycosylase (EC 3.4.-.-):3870103 reverse MW:81882 3556498 3558036 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03288 product CDS: hypothetical protein 3870309:3871847 forward MW:56854 3558138 3558482 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03289 product CDS: hypothetical protein 3871949:3872293 forward MW:12795 3558692 3558838 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03290 product PrrF 3559642 3558863 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03291 product CDS Deoxyribose-phosphate aldolase:3873453 reverse MW:27700 3559859 3560191 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03292 product CDS Rieske 2Fe-2S family protein:3874002 forward MW:12101 3560927 3560214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03293 product CDS Sugar/maltose fermentation stimulation protein:3874738 reverse MW:26440 3562099 3560927 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03294 product CDS Aspartate/tyrosine/aromatic aminotransferase:3875910 reverse MW:42740 3562449 3562889 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03295 product CDS C4-type zinc finger protein, DksA/TraR family:3876700 forward MW:16997 3563410 3564297 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03296 product CDS glutamyl-Q-tRNA synthetase:3878108 forward MW:33236 3564396 3564572 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03297 product CDS: hypothetical protein 3878207:3878383 forward MW:6969 3564556 3567510 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03298 product CDS Two-component sensor CbrA: intrcellular carbon:nitrogen balance:3881321 forward MW:108063 3567533 3568969 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03299 product CDS Two-component sensor CbrB: intrcellular carbon:nitrogen balance:3882780 forward MW:52738 3569168 3569556 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03300 product CrcZ 3569670 3571073 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03301 product CDS Poly(A) polymerase:3884884 forward MW:53693 3571066 3571572 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03302 product CDS 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase:3885383 forward MW:18433 3571801 3572601 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03303 product CDS 3-methyl-2-oxobutanoate hydroxymethyltransferase:3886412 forward MW:28066 3572598 3573449 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03304 product CDS Pantoate--beta-alanine ligase:3887260 forward MW:30663 3573692 3575356 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03305 product CDS Glucose-6-phosphate isomerase:3889167 forward MW:61517 3575605 3576471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03306 product CDS: hypothetical protein 3889416:3890282 forward MW:31761 3576611 3577789 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03307 product CDS 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase (EC 2.3.1.9):3891600 forward MW:40351 3579565 3577811 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03308 product CDS PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component (EC 2.7.1.69)3891622:3893376 reverse MW:60149 3580519 3579578 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03309 product CDS 1-phosphofructokinase:3894330 reverse MW:32757 3583386 3580519 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03310 product CDS Phosphoenolpyruvate-protein phosphotransferase of PTS system / Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component(EC 2.7.1.69):3897197 reverse MW:101843 3583741 3584736 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03311 product CDS Fructose repressor FruR, LacI family:3898547 forward MW:36332 3584733 3585536 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03312 product CDS Putative deoxyribonuclease YjjV:3899347 forward MW:30227 3586520 3585684 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03313 product CDS AmpE protein:3900331 reverse MW:30919 3587084 3586536 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03314 product CDS N-acetylmuramoyl-L-alanine amidase AmpD:3900895 reverse MW:20166 3589650 3587395 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03315 product CDS Thymidine phosphorylase:3903461 reverse MW:84156 3590004 3590852 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03316 product CDS Quinolinate phosphoribosyltransferase [decarboxylating]:3904663 forward MW:30216 3590898 3591968 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03317 note CDS DUF124 domain-containing protein 3904709:3905779 forward MW:37518 product hypothetical protein 3592029 3593270 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03318 product CDS tellurium resistance protein, putative:3907081 forward MW:45231 3594118 3593540 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03319 product CDS Tellurium resistance protein TerD:3907929 reverse MW:20249 3594731 3594156 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03320 product CDS Tellurium resistance protein TerD:3908542 reverse MW:20507 3595793 3594759 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03321 product CDS Integral membrane protein TerC:3909604 reverse MW:37857 3596269 3595820 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03322 product CDS Tellurite resistance protein TerB:3910080 reverse MW:16502 3597550 3596321 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03323 product CDS Tellurium resistance protein TerA:3911313 reverse MW:41748 3598140 3597547 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03324 product CDS Tellurium resistance protein TerD:3911957 reverse MW:21033 3598934 3598188 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03325 product CDS Hydrolase, HAD-superfamily, subfamily IB:3912751 reverse MW:27825 3599885 3598935 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03326 product CDS Citrate lyase beta subunit:3913702 reverse MW:34385 3600979 3599885 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03327 product CDS putative ATP/GTP-binding protein protein:3914796 reverse MW:39650 3601730 3600972 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03328 product CDS orf; Unknown function:3915547 reverse MW:27962 3602856 3601723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03329 product CDS: Adenine/guanine phosphoribosyltransferases-binding proteins 3915540:3916673 reverse MW:40618 3604071 3602923 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03330 note CDS Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 3916740:3917888 reverse MW:40794 product hypothetical protein 3605124 3604126 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03331 product CDS Carbamoylphosphate synthase large subunit (split gene in MJ):3918941 reverse MW:36390 3605245 3605790 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03332 product CDS: hypothetical protein 3919092:3919607 forward MW:19480 3606242 3605835 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03333 product CDS hypothetical protein:3919795 reverse MW:5538 3606931 3606239 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03334 product CDS: hypothetical protein 3920056:3920643 reverse MW:21866 3607792 3607172 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03335 product CDS Glutathione S-transferase:3921609 reverse MW:22270 3607951 3608307 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03336 product CDS Transcriptional regulator, HxlR family:3922124 forward MW:12985 3609019 3608588 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03337 product CDS Type IV pilin PilA:3922836 reverse MW:14498 3609248 3610942 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03338 product CDS Type IV fimbrial assembly, ATPase PilB:3924759 forward MW:62414 3610945 3612162 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03339 product CDS Type IV fimbrial assembly protein PilC:3925979 forward MW:44163 3612164 3613036 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03340 product CDS Leader peptidase (Prepilin peptidase) / N-methyltransferase (EC 2.1.1.-):3926853 forward MW:31995 3613033 3613656 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03341 product CDS Dephospho-CoA kinase:3927473 forward MW:23176 3613653 3613862 CDS gene yacG inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P0A8H8 locus_tag NYT1canu_03342 product DNA gyrase inhibitor YacG 3614652 3615281 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03343 product CDS: hypothetical protein 3928469:3929098 forward MW:24258 3615278 3615811 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03344 product CDS MOSC domain protein:3929628 forward MW:19866 3616028 3617326 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03345 product CDS NADH dehydrogenase:3931143 forward MW:46473 3617754 3618968 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03346 product CDS Methyl-accepting chemotaxis protein:3932785 forward MW:43648 3618978 3619346 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03347 product CDS Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY:3933163 forward MW:12991 3619373 3619663 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03348 product CDS STAS domain protein:3933480 forward MW:10221 3619710 3621815 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03349 product CDS Signal transduction histidine kinase CheA:3935629 forward MW:75464 3621844 3623499 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03350 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):3937313 forward MW:59129 3623536 3624075 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03351 product CDS Positive regulator of CheA protein activity (CheW):3937889 forward MW:19168 3624085 3624894 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03352 product CDS Chemotaxis protein methyltransferase CheR:3938708 forward MW:30692 3624891 3625397 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03353 product CDS Chemotaxis protein CheD:3939211 forward MW:19160 3625387 3626463 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03354 product CDS Chemotaxis response regulator protein-glutamate methylesterase CheB:3940277 forward MW:37994 3627708 3626497 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03355 product CDS: hypothetical protein 3940311:3941300 reverse MW:36747 3628680 3627877 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03356 product CDS virulence protein, putative:3942494 reverse MW:29494 3630115 3628847 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03357 product CDS Endoglucanase:3943428 reverse MW:26461 3632324 3630219 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03358 product CDS type III effector HopAG1:3946138 reverse MW:77025 3632575 3632324 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03359 product hypothetical protein 3633108 3633365 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03360 note CDS conserved domain protein 3946922:3947179 forward MW:9144 product hypothetical protein 3634994 3633381 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03361 product CDS Sensor histidine kinase/response regulator:3948808 reverse MW:59347 3635268 3635891 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03362 product CDS DNA-binding response regulator, LuxR family:3949705 forward MW:20591 3636265 3637923 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03363 product CDS sensor histidine kinase/response regulator:3951737 forward MW:59215 3638153 3638659 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03364 product CDS: hypothetical protein 3952033:3952473 forward MW:15467 3639284 3638784 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03365 product CDS lipoprotein, putative:3953098 reverse MW:18152 3639284 3639231 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 18 product putative signal peptide 3640732 3639464 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03366 product CDS Long-chain fatty acid transport protein:3954546 reverse MW:44851 3640732 3640673 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 3641077 3644127 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03367 product CDS: hypothetical protein 3954972:3957941 forward MW:102241 3641077 3641151 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 3644387 3644229 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03368 product CDS: hypothetical protein 3958043:3958201 reverse MW:5865 3646146 3644569 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03369 product CDS Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein):3960059 reverse MW:61296 3646314 3647588 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03370 product CDS Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE:3961402 forward MW:46294 3646314 3646391 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 3647610 3648572 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03371 product CDS Maltose/maltodextrin ABC transporter, permease protein MalF:3962386 forward MW:35951 3648569 3649411 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03372 product CDS Maltose/maltodextrin ABC transporter, permease protein MalG:3963225 forward MW:30605 3649439 3650584 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03373 product CDS Maltose/maltodextrin transport ATP-binding protein MalK:3964398 forward MW:41358 3650581 3652083 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03374 product CDS Sucrose-6-phosphate hydrolase:3965897 forward MW:56139 3652164 3653156 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03375 product CDS Sucrose specific transcriptional regulator CscR, LacI family:3966970 forward MW:36633 3659101 3653228 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03376 product CDS Transducer protein car:3972774 reverse MW:205545 3659423 3659956 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03377 product CDS: hypothetical protein 3973237:3973770 forward MW:20697 3661082 3660414 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03378 product CDS Glutathione S-transferase:3921609 reverse MW:22270 3661918 3662958 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03379 product CDS hypothetical protein:3976669 forward MW:39119 3662973 3663662 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03380 product CDS hypothetical protein:3977373 forward MW:16576 3663679 3664482 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03381 product CDS hypothetical protein:3978193 forward MW:20328 3664508 3665587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03382 product CDS Aspartate aminotransferase:3979298 forward MW:40364 3665607 3666566 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03383 product CDS N-acetyl-gamma-glutamyl-phosphate reductase:3980277 forward MW:34883 3666569 3667426 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03384 product CDS Diaminopimelate epimerase:3981137 forward MW:30785 3667419 3667943 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03385 product CDS hypothetical protein:3981654 forward MW:7255 3668579 3668022 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03386 product CDS DNA-binding HTH domain-containing proteins:254513 forward MW:8396 3668728 3668636 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03387 product hypothetical protein 3669069 3669593 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03388 product CDS Type IV secretory pathway, VirB4 components:6125080 forward MW:17082 3669590 3669889 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03389 product CDS: hypothetical protein 6125086:6125376 forward MW:10858 3669886 3670569 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03390 product CDS Protein-disulfide isomerase:5657715 reverse MW:25219 3671603 3672031 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03391 product CDS type III chaperone ShcO1:6044912 reverse MW:15502 3672280 3673152 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03392 product CDS type III effector HopO1-1:232953 reverse MW:20098 3673149 3674297 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03393 product CDS type III effector HopT1-1:6043366 reverse MW:41540 3675097 3674834 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03394 product hypothetical protein 3676401 3675463 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03395 product CDS Putative lipoprotein:1839819 reverse MW:27626 3676401 3676321 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 3676921 3677049 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03396 product CDS Resolvase:6122547 forward MW:19625 3677070 3677198 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03397 product hypothetical protein 3678182 3677289 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03398 product CDS esterase/lipase/thioesterase family protein:6064320 reverse MW:32155 3678554 3678757 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03399 product CDS Rhs family protein:6064895 forward MW:7610 3680309 3678777 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03400 product CDS ISPsy5, transposase:6066228 reverse MW:49639 3680685 3680326 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03401 product CDS ISPsy5, Orf1:6066822 reverse MW:14173 3681190 3680939 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03402 product hypothetical protein 3681207 3681680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03403 product CDS: hypothetical protein 5653691:5654122 reverse MW:15762 3681207 3681302 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 3681677 3682615 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03404 product CDS: hypothetical protein 5652756:5653694 reverse MW:33419 3681677 3681748 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3682636 3683565 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03405 product CDS: hypothetical protein 5651368:5652759 reverse MW:48484 3682636 3682704 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 3684191 3684757 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03406 product hypothetical protein 3685409 3686065 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03407 product hypothetical protein 3687085 3686168 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03408 product CDS site-specific recombinase, phage integrase family:6094273 forward MW:8337 3687106 3687960 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03409 product CDS Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,:5645428 reverse MW:60511 3688387 3688311 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03410 product tRNA-Pro(tgg) 3688623 3689483 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03411 product CDS Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like:5998594 forward MW:31355 3689483 3690178 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03412 product CDS: hypothetical protein in PFGI-1-like cluster 5998591:5999289 forward MW:25968 3690178 3691524 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03413 product CDS Replicative DNA helicase in PFGI-1-like cluster:6000635 forward MW:49289 3691521 3692111 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03414 product hypothetical protein 3692422 3692751 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03415 product CDS: hypothetical protein 6001650:6001862 forward MW:7990 3692753 3693157 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03416 product hypothetical protein 3693154 3693399 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03417 product CDS: hypothetical protein in PFGI-1-like cluster 6002274:6002510 forward MW:8467 3693389 3693652 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03418 product CDS Arc-like DNA binding:6002763 forward MW:9686 3693655 3695379 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03419 product CDS Protein with ParB-like nuclease domain in PFGI-1-like cluster:6004490 forward MW:60183 3695416 3696153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03420 product CDS: hypothetical protein in PFGI-1-like cluster 6004527:6005264 forward MW:27570 3696159 3697511 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03421 product CDS: hypothetical protein in PFGI-1-like cluster 6005270:6006622 forward MW:49109 3697508 3698698 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03422 product hypothetical protein 3698713 3699492 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03423 product CDS: hypothetical protein in PFGI-1-like cluster 6077802:6078581 forward MW:28817 3699489 3700052 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03424 product CDS Integrase regulator R:6079141 forward MW:20606 3700058 3700891 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03425 product CDS: Uncharacterized phage-encoded protein 6079147:6079980 forward MW:30422 3700903 3701364 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03426 product CDS Single-stranded DNA-binding protein in PFGI-1-like cluster:6080453 forward MW:17220 3701860 3701693 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03427 product CDS hypothetical protein:6080946 reverse MW:6432 3703453 3702644 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03428 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 3704472 3703450 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03429 product CDS ISPsy4, transposase:6120546 reverse MW:37529 3704979 3705503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03430 product CDS hypothetical protein in PFGI-1-like cluster:6101388 forward MW:18985 3705538 3706035 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03431 product CDS hypothetical protein in PFGI-1-like cluster:6101920 forward MW:18739 3706038 3707990 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03432 product CDS DNA/RNA helicase in PFGI-1-like cluster:5815856 reverse MW:5313 3708482 3708348 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03433 product hypothetical protein 3708550 3711270 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03434 product CDS Avirulence A protein:5815150 reverse MW:100532 3711758 3712831 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03435 product CDS Transposase:5811915 reverse MW:39326 3713093 3713662 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03436 product CDS Conjugative transfer protein PilL in PFGI-1-like cluster:5810607 reverse MW:20603 3713093 3713155 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 3713785 3715806 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03437 product CDS DNA topoisomerase III:5809915 reverse MW:73593 3716600 3716748 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03438 product radC 3716879 3717466 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03439 product CDS hypothetical protein:5806410 reverse MW:6720 3717418 3717569 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03440 product radC 3717651 3718019 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03441 product hypothetical protein 3718101 3718254 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03442 product radC 3718321 3718539 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03443 product CDS hypothetical protein:5805379 reverse MW:7943 3718637 3719212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03444 product CDS: Periplasmic protein TonB, links inner and outer membranes 5804488:5805063 reverse MW:20331 3719699 3720034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03445 product CDS: hypothetical protein 5803666:5804001 reverse MW:12711 3720135 3720746 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03446 product CDS: Hypothetical protein 5802954:5803565 reverse MW:22504 3720873 3721472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03447 product CDS: Hypothetical protein 5802228:5802827 reverse MW:22808 3721503 3722954 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03448 product CDS: Plasmid related protein 5800746:5802197 reverse MW:54404 3723058 3725316 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03449 product CDS Superfamily II DNA/RNA helicases, SNF2 family:5800642 reverse MW:84287 3726677 3725760 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03450 product hypothetical protein 3728260 3726674 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03451 product CDS XamI DNA methyltransferase:5797026 forward MW:57685 3728445 3728257 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03452 product CDS plasmid-related protein:5795443 forward MW:6510 3728738 3728541 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03453 product CDS hypothetical protein:5795159 forward MW:7445 3730000 3731295 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03454 product CDS Levansucrase:5793700 reverse MW:47745 3731474 3731355 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03455 product CDS hypothetical protein:5792345 forward MW:4632 3731515 3732693 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03456 product hypothetical protein 3733715 3732612 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03457 product CDS ISPsy19, transposase:6133168 forward MW:41651 3733842 3734819 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03458 product CDS IS1479 transposase 6015788:6016804 forward MW:38512 3735296 3736000 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03459 product CDS Methyl-accepting chemotaxis protein:6017985 forward MW:25271 3736009 3736755 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03460 product CDS probable exported protein 6017994:6018740 forward MW:27655 3736009 3736086 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 3736740 3737297 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03461 product CDS Soluble lytic murein transglycosylase proteins (some contain LysM/invasin domains):5876269 reverse MW:8747 3736740 3736805 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 3737294 3737800 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03462 product CDS: hypothetical protein 5875524:5876030 reverse MW:18129 3737294 3737356 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 3737812 3739971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03463 product CDS Type IV secretory pathway, VirD4 components:6021956 forward MW:80139 3740011 3740769 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03464 product CDS putative membrane protein:5873308 reverse MW:28023 3740779 3742191 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03465 product CDS putative DNA helicase:5872495 reverse MW:53057 3743010 3742201 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03466 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 3744029 3743007 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03467 product CDS ISPsy4, transposase:6120546 reverse MW:37529 3744693 3744442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03468 product CDS: Type II secretory pathway, component ExeA (predicted ATPase) 6140298:6140492 reverse MW:7175 3744793 3746136 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03469 product CDS candidate type III effector HolPtoQ:6075160 forward MW:48881 3748057 3746252 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03470 product CDS: hypothetical protein 6075276:6076496 reverse MW:43034 3748822 3750072 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03471 product CDS putative transposase:5941457 reverse MW:46763 3751451 3750207 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03472 product CDS: hypothetical protein 5671481:5672725 forward MW:46412 3752757 3751504 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03473 product CDS nikkomycin biosynthesis domain protein:5671428 forward MW:46572 3753944 3752844 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03474 product CDS Unknown, probable amidinotransferase:5670088 forward MW:42629 3754757 3754605 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03475 product CDS: hypothetical protein 5668175:5668327 forward MW:5821 3755204 3754890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03476 product CDS: hypothetical protein 5667806:5668042 forward MW:8281 3756182 3755247 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03477 product CDS: hypothetical protein 5666750:5667685 forward MW:33486 3756612 3756986 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03478 product CDS Aconitase B:5666278 reverse MW:12364 3757066 3757431 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03479 product CDS Candidate type III effector Hop protein:5665800 reverse MW:10841 3757066 3757176 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 37 product putative signal peptide 3757428 3757667 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03480 product CDS: hypothetical protein 5665265:5665504 reverse MW:8432 3757687 3758055 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03481 product CDS: hypothetical protein 5664877:5665245 reverse MW:12933 3757687 3757788 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 34 product putative signal peptide 3758071 3758463 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03482 product CDS: hypothetical protein 5664469:5664861 reverse MW:14410 3758460 3759128 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03483 product CDS Possible exported protein:5664472 reverse MW:25185 3759125 3760048 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03484 product CDS: hypothetical protein 5662884:5663807 reverse MW:33427 3759125 3759202 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 3760038 3761534 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03485 product CDS putative exported protein:5662894 reverse MW:52759 3761512 3761967 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03486 product CDS putative lipoprotein:5661312 reverse MW:12875 3761967 3764924 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03487 product CDS Type IV secretory pathway, VirB4 components:5660965 reverse MW:111082 3764921 3765220 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03488 product CDS: hypothetical protein 5657712:5658002 reverse MW:10847 3765217 3765915 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03489 product CDS Protein-disulfide isomerase:5657715 reverse MW:25219 3765912 3766124 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03490 product hypothetical protein 3766226 3766771 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03491 product CDS: hypothetical protein 5946017:5946403 forward MW:14148 3767681 3767127 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03492 product hypothetical protein 3768261 3767722 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03493 product CDS hypothetical protein:5655210 forward MW:8505 3768521 3768279 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03494 product CDS hypothetical protein:5654653 forward MW:6503 3768765 3769241 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03495 product CDS: hypothetical protein 5653691:5654122 reverse MW:15762 3768765 3768863 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 33 product putative signal peptide 3769238 3770176 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03496 product CDS: hypothetical protein 5652756:5653694 reverse MW:33419 3769238 3769309 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3770197 3771564 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03497 product CDS: hypothetical protein 5651368:5652759 reverse MW:48484 3770197 3770265 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 3771567 3771965 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03498 product CDS hypothetical protein:5651365 reverse MW:15003 3771962 3773500 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03499 product CDS putative membrane protein:5650970 reverse MW:56061 3773972 3773577 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03500 product CDS hypothetical protein:5649355 forward MW:14531 3776495 3774174 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03501 product CDS Effector protein hopW1-1 (Type III effector hopPmaA):5648758 forward MW:87411 3777246 3778136 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03502 product CDS Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,:5645428 reverse MW:60511 3778180 3779202 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03503 product CDS ISPsy4, transposase:6120546 reverse MW:37529 3779199 3780008 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03504 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 3780045 3781133 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03505 product CDS Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,:5645428 reverse MW:60511 3781130 3782584 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03506 product CDS Integrase:5643770 reverse MW:55388 3782974 3782898 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03507 product tRNA-Pro(tgg) 3783210 3784070 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03508 product CDS Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like:5998594 forward MW:31355 3784128 3785474 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03509 product CDS Replicative DNA helicase in PFGI-1-like cluster:6000635 forward MW:49289 3785471 3786061 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03510 product hypothetical protein 3786372 3786701 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03511 product CDS: hypothetical protein 6001650:6001862 forward MW:7990 3786703 3787107 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03512 product hypothetical protein 3787104 3787349 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03513 product CDS: hypothetical protein in PFGI-1-like cluster 6002274:6002510 forward MW:8467 3787339 3787602 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03514 product CDS Arc-like DNA binding:6002763 forward MW:9686 3787605 3789329 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03515 product CDS Protein with ParB-like nuclease domain in PFGI-1-like cluster:6004490 forward MW:60183 3789366 3790103 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03516 product CDS: hypothetical protein in PFGI-1-like cluster 6004527:6005264 forward MW:27570 3790109 3791461 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03517 product CDS: hypothetical protein in PFGI-1-like cluster 6005270:6006622 forward MW:49109 3791516 3792814 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03518 product hypothetical protein 3792807 3793586 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03519 product CDS: hypothetical protein in PFGI-1-like cluster 6077802:6078581 forward MW:28817 3793583 3794146 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03520 product CDS Integrase regulator R:6079141 forward MW:20606 3794152 3794985 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03521 product CDS: Uncharacterized phage-encoded protein 6079147:6079980 forward MW:30422 3794997 3795458 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03522 product CDS Single-stranded DNA-binding protein in PFGI-1-like cluster:6080453 forward MW:17220 3795664 3795906 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03523 product CDS hypothetical protein:3329713 reverse MW:4203 3796274 3797629 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03524 product CDS hypothetical protein in PFGI-1-like cluster:3329228 reverse MW:71256 3797664 3798161 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03525 product CDS hypothetical protein in PFGI-1-like cluster:6101920 forward MW:18739 3798164 3800116 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03526 product CDS: Superfamily II DNA/RNA helicases, SNF2 family 906457:909213 forward MW:104515 3800342 3800923 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03527 product CDS Conjugative transfer protein PilL in PFGI-1-like cluster:5810607 reverse MW:20603 3800342 3800404 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 3800924 3801028 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03528 product hypothetical protein 3801390 3801572 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03529 product hypothetical protein 3801572 3802303 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03530 product CDS: hypothetical protein 5288207:5289103 forward MW:32964 3803603 3802626 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03531 product CDS IS1479 transposase 6015788:6016804 forward MW:38512 3804157 3806178 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03532 product CDS DNA topoisomerase III:5809915 reverse MW:73593 3806972 3807120 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03533 product radC 3807251 3807784 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03534 product hypothetical protein 3807764 3807910 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03535 product radC 3807992 3808360 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03536 product hypothetical protein 3808444 3808597 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03537 product radC 3808664 3808882 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03538 product CDS hypothetical protein:5805379 reverse MW:7943 3808980 3809555 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03539 product CDS: Periplasmic protein TonB, links inner and outer membranes 5804488:5805063 reverse MW:20331 3809621 3809776 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03540 product hypothetical protein 3809847 3810134 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03541 product hypothetical protein 3810251 3810586 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03542 product CDS: hypothetical protein 5803666:5804001 reverse MW:12711 3810687 3811298 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03543 product CDS: Hypothetical protein 5802954:5803565 reverse MW:22504 3811423 3812022 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03544 product CDS: Hypothetical protein 5802228:5802827 reverse MW:22808 3812052 3813503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03545 product CDS: Plasmid related protein 5800746:5802197 reverse MW:54404 3813607 3815865 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03546 product CDS Superfamily II DNA/RNA helicases, SNF2 family:5800642 reverse MW:84287 3817475 3815967 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03547 product hypothetical protein 3817785 3817904 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03548 product hypothetical protein 3818088 3818525 CDS EC_number 3.1.-.- gene vsr inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P09184 locus_tag NYT1canu_03549 product Very short patch repair protein 3819519 3818464 CDS EC_number 2.1.1.37 gene ydiO inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:O34939 locus_tag NYT1canu_03550 product putative BsuMI modification methylase subunit YdiO 3820746 3819748 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03551 product hypothetical protein 3821047 3821748 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03552 product CDS Methyl-accepting chemotaxis protein:5878034 reverse MW:25525 3821757 3822503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03553 product CDS probable exported protein 6017994:6018740 forward MW:27655 3821757 3821834 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 3822488 3823045 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03554 product CDS Soluble lytic murein transglycosylase proteins (some contain LysM/invasin domains):5876269 reverse MW:8747 3822488 3822553 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 3823042 3823548 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03555 product CDS: hypothetical protein 5875524:5876030 reverse MW:18129 3823042 3823104 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 3823560 3825719 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03556 product CDS Type IV secretory pathway, VirD4 components:6021956 forward MW:80139 3825759 3826517 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03557 product CDS putative membrane protein:5873308 reverse MW:28023 3826527 3827978 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03558 product CDS putative DNA helicase:5872495 reverse MW:53057 3828174 3829190 CDS EC_number 3.1.3.48 gene hopD2 inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:Q79LY0 locus_tag NYT1canu_03559 product Effector protein hopD2 3829997 3829566 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03560 product hypothetical protein 3830167 3830499 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03561 product CDS Aconitase B:5666278 reverse MW:12364 3830579 3830944 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03562 product CDS Candidate type III effector Hop protein:5665800 reverse MW:10841 3830579 3830689 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 37 product putative signal peptide 3830941 3831180 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03563 product CDS: hypothetical protein 5665265:5665504 reverse MW:8432 3831200 3831568 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03564 product CDS: hypothetical protein 5664877:5665245 reverse MW:12933 3831200 3831301 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 34 product putative signal peptide 3831584 3831976 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03565 product CDS: hypothetical protein 5664469:5664861 reverse MW:14410 3831973 3832641 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03566 product CDS Possible exported protein:5664472 reverse MW:25185 3832638 3833561 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03567 product CDS: hypothetical protein 5662884:5663807 reverse MW:33427 3833551 3835047 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03568 product CDS putative exported protein:5662894 reverse MW:52759 3835025 3835486 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03569 product CDS putative lipoprotein:5661312 reverse MW:12875 3835486 3838443 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03570 product CDS Type IV secretory pathway, VirB4 components:5660965 reverse MW:111082 3838440 3838739 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03571 product CDS: hypothetical protein 5657712:5658002 reverse MW:10847 3838736 3839422 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03572 product CDS Protein-disulfide isomerase:5657715 reverse MW:25219 3839956 3839468 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03573 product hypothetical protein 3840648 3840235 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03574 product CDS C4-type zinc finger protein, DksA/TraR family:5938749 reverse MW:7313 3841067 3840684 CDS gene csrA_1 inference ab initio prediction:Prodigal:2.6 inference protein motif:HAMAP:MF_00167 locus_tag NYT1canu_03575 product Carbon storage regulator 3842596 3841415 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03576 product hypothetical protein 3844706 3842589 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03577 product hypothetical protein 3847554 3844768 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03578 product hypothetical protein 3847995 3848471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03579 product CDS: hypothetical protein 5653691:5654122 reverse MW:15762 3847995 3848093 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 33 product putative signal peptide 3848468 3849406 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03580 product CDS: hypothetical protein 5652756:5653694 reverse MW:33419 3848468 3848539 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3849427 3850797 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03581 product CDS: hypothetical protein 5651368:5652759 reverse MW:48484 3849427 3849498 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3850800 3851168 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03582 product CDS hypothetical protein:5651365 reverse MW:15003 3851165 3852703 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03583 product CDS putative membrane protein:5650970 reverse MW:56061 3853186 3852767 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03584 product CDS hypothetical protein:5649355 forward MW:14531 3853798 3853409 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03585 product hypothetical protein 3853809 3855722 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03586 product CDS Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,:5645428 reverse MW:60511 3855719 3857158 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03587 product CDS Integrase:5643770 reverse MW:55388 3857587 3857511 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03588 product tRNA-Pro(tgg) 3857758 3857683 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03589 product tRNA-Lys(ttt) 3857840 3857764 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03590 product tRNA-Pro(tgg) 3857945 3857870 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03591 product tRNA-Asn(gtt) 3860812 3858248 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03592 product CDS ClpB protein:4857486 reverse MW:93045 3861712 3860984 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03593 note CDS COG1496: Uncharacterized conserved protein 4857715:4858443 reverse MW:25965 product hypothetical protein 3862671 3861709 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03594 product CDS Ribosomal large subunit pseudouridine synthase D(Pseudouridine synthase) (Uracil hydrolyase):4859360 reverse MW:33933 3862821 3863843 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03595 product CDS Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB):4860574 forward MW:38380 3863890 3864216 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03596 product CDS: hypothetical protein 4860723:4860947 forward MW:8409 3864206 3865801 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03597 product CDS Two-component sensor PilS:4862532 forward MW:58306 3865804 3867144 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03598 product CDS Type IV fimbriae expression regulatory protein PilR:4863875 forward MW:49944 3867450 3868067 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03599 product CDS Transcriptional regulator, TetR family:4864798 forward MW:23187 3868149 3869264 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03600 product CDS Membrane-fusion protein:4865995 forward MW:39231 3868149 3868220 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3869261 3872371 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03601 product CDS AcrB/AcrD/AcrF family protein:4869102 forward MW:112753 3873114 3872368 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03602 product CDS NADP oxidoreductase, coenzyme F420-dependent:4869845 reverse MW:25845 3873596 3873153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03603 product CDS Organic hydroperoxide resistance transcriptional regulator:4870249 reverse MW:13513 3874830 3873727 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03604 product CDS Glycine oxidase ThiO:4871561 reverse MW:39329 3875260 3874859 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03605 product CDS Type IV pilus biogenesis protein PilE:4871952 reverse MW:12692 3878475 3875272 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03606 product CDS Type IV fimbrial biogenesis protein PilY1:4874849 reverse MW:100777 3878968 3878462 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03607 product CDS Type IV fimbrial biogenesis protein PilX:4875698 reverse MW:17690 3879687 3878980 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03608 product CDS Type IV fimbrial biogenesis protein PilW:4876417 reverse MW:25465 3880199 3879684 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03609 product CDS Type IV fimbrial biogenesis protein PilV:4876896 reverse MW:16316 3880672 3880199 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03610 product CDS type 4 fimbrial biogenesis protein FimU:4877402 reverse MW:16380 3880804 3881304 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03611 product CDS Type IV fimbrial biogenesis protein FimT:4878034 forward MW:18167 3882258 3881311 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03612 product CDS 4-hydroxy-3-methylbut-2-enyl diphosphate reductase:4878988 reverse MW:34384 3882818 3882342 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03613 product CDS FKBP-type peptidyl-prolyl cis-trans isomerase slpA:4879548 reverse MW:17222 3883332 3882811 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03614 product CDS Lipoprotein signal peptidase:4880062 reverse MW:19319 3886156 3883325 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03615 product CDS Isoleucyl-tRNA synthetase:4882838 reverse MW:104055 3887103 3886177 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03616 product CDS Riboflavin kinase / FMN adenylyltransferase (EC 2.7.7.2):4883833 reverse MW:33864 3888774 3887236 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03617 product CDS Proposed peptidoglycan lipid II flippase MurJ:4885504 reverse MW:56375 3889025 3889303 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03618 product CDS SSU ribosomal protein S20p:4886033 forward MW:9979 3889978 3889508 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03619 note CDS Conserved uncharacterized protein CreA 4886238:4886708 reverse MW:17016 product hypothetical protein 3889978 3889916 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 3891122 3890004 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03620 product CDS Glutamate 5-kinase:4887852 reverse MW:39770 3892436 3891213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03621 product CDS: GTP-binding protein Obg 4887943:4889166 reverse MW:44689 3892928 3892653 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03622 product CDS LSU ribosomal protein L27p:4889658 reverse MW:9746 3893272 3892961 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03623 product CDS LSU ribosomal protein L21p:4890002 reverse MW:11516 3893512 3894480 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03624 product CDS Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29):4891210 forward MW:35342 3895317 3894553 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03625 product CDS membrane protein, putative:4892047 reverse MW:26374 3896452 3895352 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03626 product CDS Selenophosphate-dependent tRNA 2-selenouridine synthase:4893182 reverse MW:41081 3897486 3896452 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03627 product CDS Selenide,water dikinase:4894216 reverse MW:36214 3897723 3898574 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03628 product CDS Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1):4895304 forward MW:30772 3897723 3897794 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3898571 3899368 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03629 product CDS Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1):4896098 forward MW:28732 3899329 3900189 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03630 product CDS Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1):4896919 forward MW:29398 3900186 3900953 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03631 product CDS Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1):4897683 forward MW:27149 3902761 3901034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03632 product CDS Gamma-glutamyltranspeptidase:4899491 reverse MW:61262 3902761 3902687 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 3903051 3903818 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03633 product CDS DNA-binding response regulator:4900548 forward MW:28523 3903815 3905194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03634 product CDS sensor histidine kinase:4901924 forward MW:50356 3907335 3905365 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03635 product CDS TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins:4904065 reverse MW:72663 3907335 3907249 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 3908340 3907450 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03636 product CDS 3-hydroxyisobutyrate dehydrogenase:4905070 reverse MW:30400 3909901 3908375 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03637 product CDS Methylmalonate-semialdehyde dehydrogenase:4906631 reverse MW:54084 3910059 3911003 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03638 product CDS Transcriptional regulator, LysR family:4907733 forward MW:37129 3911150 3911674 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03639 product CDS ISPsy5, transposase:4908404 forward MW:19515 3912277 3911840 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03640 product CDS: hypothetical protein 1272716:1272955 forward MW:8640 3913925 3912999 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03641 product CDS hypothetical protein:4910655 reverse MW:34675 3914515 3913931 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03642 product CDS: hypothetical protein 1270199:1270711 forward MW:18789 3915032 3917098 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03643 product CDS VgrG protein:4913828 forward MW:76920 3917095 3917646 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03644 product CDS hypothetical protein:4914376 forward MW:21210 3917643 3921428 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03645 product CDS hypothetical protein:4918158 forward MW:137933 3921421 3922479 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03646 note CDS Conserved domain protein 4918784:4919209 forward MW:16900 product hypothetical protein 3924798 3922705 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03647 product CDS Exodeoxyribonuclease V alpha chain ## RecD:4921528 reverse MW:76686 3928487 3924795 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03648 product CDS Exodeoxyribonuclease V beta chain ## RecB:4925217 reverse MW:137658 3931960 3928484 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03649 product CDS Exodeoxyribonuclease V gamma chain ## RecC:4928690 reverse MW:130274 3932267 3932158 rRNA locus_tag NYT1canu_03650 product 5S ribosomal RNA score 1.9e-12 3935318 3932429 rRNA locus_tag NYT1canu_03651 product 23S ribosomal RNA score 0 3935639 3935564 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03652 product tRNA-Ala(tgc) 3935760 3935684 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03653 product tRNA-Ile(gat) 3937392 3935858 rRNA locus_tag NYT1canu_03654 product 16S ribosomal RNA score 0 3939480 3937987 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03655 product CDS Methylmalonate-semialdehyde dehydrogenase:3026355 forward MW:54552 3940920 3939574 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03656 product CDS Omega-amino acid--pyruvate aminotransferase:3024768 forward MW:48611 3941048 3941968 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03657 product CDS LysR family transcriptional regulator 3022374:3023294 reverse MW:33902 3942154 3943551 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03658 product CDS Xanthine permease:3022188 reverse MW:48798 3943650 3944306 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03659 product CDS Transcriptional regulator, TetR family:3020692 reverse MW:24594 3944339 3944932 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03660 product CDS: protein co-occurring with transport systems 3019410:3020003 reverse MW:21511 3945456 3947009 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03661 product CDS Sugar ABC transporter, ATP-binding protein:3018940 reverse MW:57396 3947021 3948121 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03662 product CDS probable permease of ABC transporter:3017321 reverse MW:39341 3948121 3949047 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03663 product CDS ABC transporter, permease protein:3016224 reverse MW:32659 3949334 3950023 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03664 product CDS Probable short-chain dehydrogenase:3015008 reverse MW:24370 3950147 3951502 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03665 product CDS Chlorohydrolase/deaminase family protein:3014195 reverse MW:48779 3952766 3951669 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03666 product CDS Calcium/proton antiporter:3012673 forward MW:39010 3953013 3953933 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03667 product CDS Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1):3011329 reverse MW:32840 3953013 3953087 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 3953949 3954923 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03668 product CDS Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1):3010408 reverse MW:33836 3954920 3955888 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03669 product CDS Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1):3009422 reverse MW:33575 3955892 3956683 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03670 product CDS Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1):3008450 reverse MW:28336 3956913 3958007 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03671 product CDS bmp family protein:3007429 reverse MW:39471 3956913 3957008 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 3958085 3959050 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03672 product CDS 2-Oxobutyrate oxidase, putative:3006257 reverse MW:36200 3959129 3960082 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03673 product CDS Adenosine deaminase:3005213 reverse MW:36118 3961079 3960387 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03674 product CDS Transcriptional regulator, ArsR family:3003955 forward MW:24723 3962439 3961516 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03675 product CDS Transcriptional regulator, LysR family:3002826 forward MW:33968 3962552 3963565 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03676 product CDS Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) ; Similar to arginate lyase:3001826 reverse MW:38108 3964814 3963618 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03677 product CDS Multidrug resistance transporter, Bcr/CflA family:3000724 forward MW:41893 3965158 3964961 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03678 product CDS Copper chaperone:2999381 forward MW:6930 3965305 3965685 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03679 product CDS: hypothetical protein 2998657:2999037 reverse MW:13765 3965305 3965376 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3965755 3967953 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03680 product CDS Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.5); Copper-translocating P-type ATPase(EC 3.6.3.4):2998587 reverse MW:77338 3967950 3968351 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03681 product CDS Cu(I)-responsive transcriptional regulator:2996392 reverse MW:14819 3969367 3968471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03682 product CDS: hypothetical protein 2994975:2995871 forward MW:33013 3969811 3970839 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03683 product CDS Sodium/bile acid symporter family:2994627 reverse MW:40357 3972244 3970847 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03684 product CDS: hypothetical protein 2992098:2993495 forward MW:51846 3972555 3972277 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03685 product CDS: hypothetical protein 2991787:2992065 forward MW:10226 3973965 3972688 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03686 product CDS 3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase (EC 2.3.1.9):2991654 forward MW:45407 3974074 3975429 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03687 product CDS 3-oxoacyl-[acyl-carrier protein] reductase:2990268 reverse MW:47883 3975460 3976317 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03688 product CDS Acyl dehydratase:2988885 reverse MW:31510 3976432 3976737 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03689 product CDS: hypothetical protein 2987605:2987910 reverse MW:11807 3976734 3977483 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03690 product CDS 3-demethylubiquinone-9 3-methyltransferase:2987608 reverse MW:28379 3977503 3978141 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03691 product CDS lipoprotein, putative:2986839 reverse MW:23007 3977503 3977568 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 3978171 3978734 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03692 product CDS lipoprotein, putative:2986171 reverse MW:21261 3978171 3978236 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 3979454 3978864 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03693 note CDS Uncharacterized protein, similar to the N-terminal domain of Lon protease 2984888:2985478 forward MW:21842 product hypothetical protein 3980184 3979468 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03694 product CDS LrgA-associated membrane protein LrgB:2984874 forward MW:24904 3980543 3980181 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03695 product CDS Antiholin-like protein LrgA:2984161 forward MW:13309 3980741 3981196 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03696 product CDS MaoC-like domain protein:2983601 reverse MW:16691 3981337 3983064 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03697 product CDS MORN repeat family protein:2983005 reverse MW:62311 3983092 3983733 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03698 product CDS Oxidoreductase:2981250 reverse MW:23299 3984068 3983772 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03699 product CDS lipoprotein, putative:2980570 forward MW:9296 3984068 3983997 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 3984678 3984049 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03700 product CDS 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX:2980293 forward MW:22671 3986024 3984675 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03701 product CDS UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase:2979667 forward MW:48156 3986250 3987770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03702 product CDS Aldehyde dehydrogenase:2978092 reverse MW:54822 3988066 3989460 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03703 product CDS Ethanolamine ammonia-lyase heavy chain:2976276 reverse MW:50407 3989472 3990320 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03704 product CDS Ethanolamine ammonia-lyase light chain:2974870 reverse MW:30392 3990404 3990862 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03705 product CDS Histone acetyltransferase HPA2:2973938 reverse MW:17771 3991055 3991702 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03706 product CDS DedA protein:2973287 reverse MW:23515 3991706 3992515 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03707 product CDS Inner membrane protein:2972636 reverse MW:30942 3992626 3993153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03708 product CDS Inorganic pyrophosphatase:2971716 reverse MW:19445 3993512 3994243 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03709 product CDS Transcriptional regulator:2970830 reverse MW:27500 3994827 3994546 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03710 product CDS: hypothetical protein 2969515:2969796 forward MW:10262 3994993 3994817 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03711 product CDS: hypothetical protein 2969373:2969525 forward MW:5677 3995396 3994974 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03712 product CDS: hypothetical protein 2969104:2969307 forward MW:7482 3995526 3995798 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03713 product CDS DNA-binding protein:2968815 reverse MW:9818 3996672 3995821 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03714 product CDS: hypothetical protein 2967669:2968520 forward MW:31188 3998963 3996672 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03715 product CDS autotransporter, putative:2967669 forward MW:79380 3998963 3998889 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4000185 3999142 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03716 product CDS WavE lipopolysaccharide synthesis superfamily:2965199 forward MW:34813 4000844 4000239 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03717 product CDS: hypothetical protein 2963497:2964102 forward MW:22979 4002616 4000841 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03718 product CDS: hypothetical protein 2961725:2963500 forward MW:66438 4002940 4002620 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03719 note CDS Conserved domain protein 2961401:2961721 forward MW:11545 product hypothetical protein 4003659 4002937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03720 product CDS Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)2960673:2961404 forward MW:27369 4004303 4003665 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03721 product CDS Hydrolase in polyol utilization gene cluster, haloacid dehalogenase-like family:2960676 forward MW:23698 4004925 4004311 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03722 product CDS: hypothetical protein 2959416:2960030 forward MW:23170 4005688 4004927 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03723 product CDS Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)2958653:2959414 forward MW:27187 4006474 4005770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03724 product CDS O-antigen ABC transporter, ATP-binding protein:2958571 forward MW:26136 4007247 4006471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03725 product CDS O-antigen export system, permease protein:2957870 forward MW:28708 4007575 4008417 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03726 product CDS Glutathione S-transferase:2956766 reverse MW:31442 4008619 4009638 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03727 product CDS Putative cytoplasmic protein:2955722 reverse MW:39011 4009708 4010874 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03728 product CDS Cystathionine beta-lyase:2954633 reverse MW:42084 4010978 4011223 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03729 product CDS Exodeoxyribonuclease VII small subunit:2953363 reverse MW:9093 4011220 4012107 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03730 product CDS Octaprenyl-diphosphate synthase / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29):2953121 reverse MW:31255 4012270 4014165 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03731 product CDS 1-deoxy-D-xylulose 5-phosphate synthase:2952071 reverse MW:68050 4014682 4014266 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03732 product CDS Permeases of the major facilitator superfamily:2950075 forward MW:14936 4015296 4014679 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03733 product CDS GTP cyclohydrolase II:2949662 forward MW:22087 4016396 4015434 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03734 product CDS Thiamine-monophosphate kinase:2948907 forward MW:33050 4016910 4016413 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03735 product CDS Transcription termination protein NusB:2947928 forward MW:18672 4017383 4016907 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03736 product CDS 6,7-dimethyl-8-ribityllumazine synthase:2947434 forward MW:16520 4018603 4017512 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03737 product CDS 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II:2946829 forward MW:39651 4019283 4018621 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03738 product CDS Riboflavin synthase alpha chain:2945720 forward MW:23433 4020467 4019331 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03739 product CDS Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase(EC 1.1.1.193):2945010 forward MW:40044 4020970 4020473 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03740 product CDS Ribonucleotide reductase transcriptional regulator NrdR:2943868 forward MW:18924 4021114 4021563 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03741 product CDS lipoprotein, putative:2943227 reverse MW:15729 4021114 4021200 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 4021560 4022213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03742 note CDS Conserved domain protein 2942128:2942781 reverse MW:24084 product hypothetical protein 4022386 4023258 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03743 product CDS: Thioredoxin domain-containing protein EC-YbbN 2941083:2941955 reverse MW:31916 4023669 4023313 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03744 product CDS: hypothetical protein 2940672:2941028 forward MW:12593 4024167 4023745 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03745 product CDS: hypothetical protein 2940174:2940596 forward MW:16033 4024471 4025058 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03746 product CDS Predicted zinc-binding protein:2939870 reverse MW:21087 4024471 4024533 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 4025128 4025838 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03747 product CDS Methionine ABC transporter ATP-binding protein:2939213 reverse MW:25704 4025840 4027105 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03748 product CDS ABC-type antimicrobial peptide transport system, permease component:2938501 reverse MW:46237 4027114 4027638 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03749 product CDS: hypothetical protein 2936703:2937227 reverse MW:19118 4027114 4027173 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 4027742 4028428 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03750 product CDS Outer membrane protein W precursor:2936599 reverse MW:24444 4027742 4027813 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 4029528 4028599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03751 product CDS UDP-glucose 4-epimerase:2935742 forward MW:33454 4030405 4029521 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03752 product CDS dTDP-4-dehydrorhamnose reductase:2934820 forward MW:31939 4032870 4030564 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03753 product CDS Potassium efflux system KefA protein / Small-conductance mechanosensitive channel:2933777 forward MW:82374 4032870 4032796 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4033126 4033944 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03754 product CDS Non-heme chloroperoxidase:2931215 reverse MW:29946 4034113 4034916 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03755 product CDS Ferric siderophore transport system, periplasmic binding protein TonB:2930228 reverse MW:27944 4034927 4035619 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03756 product CDS MotA/TolQ/ExbB proton channel family protein:2929414 reverse MW:25166 4035621 4036025 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03757 product CDS Biopolymer transport protein ExbD/TolR:2928720 reverse MW:14154 4036096 4038402 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03758 product CDS TonB-dependent receptor:2928245 reverse MW:83469 4036096 4036203 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 36 product putative signal peptide 4038528 4038331 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03759 product hypothetical protein 4038570 4038809 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03760 product CDS hypothetical protein:2925771 reverse MW:8978 4039504 4039085 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03761 product hypothetical protein 4039504 4039442 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 4039928 4040647 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03762 product CDS: hypothetical protein 2923694:2924413 reverse MW:26347 4040822 4041592 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03763 product CDS Cell-cell signaling protein, C-factor:2923519 reverse MW:27475 4041987 4041745 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03764 product hypothetical protein 4042201 4042719 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03765 product hypothetical protein 4043882 4042752 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03766 product CDS N-acetylglucosamine kinase bacterial type predicted / Transcriptional regulator:2921589 forward MW:41469 4044048 4045484 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03767 product CDS Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3):2920293 reverse MW:52129 4044048 4044116 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4045481 4046374 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03768 product CDS SN-glycerol-3-phosphate transport system permease protein UgpA (TC 3.A.1.1.3):2918860 reverse MW:32357 4046371 4047264 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03769 product CDS SN-glycerol-3-phosphate transport system permease protein UgpE (TC 3.A.1.1.3):2917970 reverse MW:32576 4047261 4048367 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03770 product CDS SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3):2917080 reverse MW:40151 4048374 4049135 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03771 product CDS Glycerophosphoryl diester phosphodiesterase:2915904 reverse MW:25270 4049132 4049875 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03772 product CDS Inositol-1-monophosphatase:2915209 reverse MW:26707 4050671 4049994 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03773 product CDS Fatty acid desaturase:2914347 forward MW:25823 4050937 4051236 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03774 product CDS: hypothetical protein 2913105:2913404 reverse MW:11282 4052021 4051452 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03775 product CDS Single-stranded DNA-binding protein:2912889 forward MW:18019 4053425 4052031 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03776 product CDS Putative transport protein:2912310 forward MW:48899 4053555 4056389 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03777 product CDS Excinuclease ABC subunit A:2910786 reverse MW:104357 4056947 4056483 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03778 product CDS Bacterioferritin:2907858 forward MW:17993 4057596 4057210 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03779 product CDS LSU ribosomal protein L17p:2907131 forward MW:14527 4058639 4057638 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03780 product CDS DNA-directed RNA polymerase alpha subunit:2906703 forward MW:36674 4059282 4058662 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03781 product CDS SSU ribosomal protein S4p (S9e):2905679 forward MW:23076 4059690 4059301 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03782 product CDS SSU ribosomal protein S11p (S14e):2905040 forward MW:13615 4060077 4059721 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03783 product CDS SSU ribosomal protein S13p (S18e):2904620 forward MW:13369 4060140 4060045 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03784 product Alpha_RBS 4061687 4060353 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03785 product CDS Preprotein translocase secY subunit (TC 3.A.5.1.1):2903988 forward MW:47913 4062122 4061688 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03786 product CDS LSU ribosomal protein L15p (L27Ae):2902653 forward MW:15166 4062302 4062126 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03787 product CDS LSU ribosomal protein L30p (L7e):2902215 forward MW:6557 4062805 4062305 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03788 product CDS SSU ribosomal protein S5p (S2e):2902036 forward MW:17732 4063159 4062809 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03789 product CDS LSU ribosomal protein L18p (L5e):2901532 forward MW:12603 4063703 4063170 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03790 product CDS LSU ribosomal protein L6p (L9e):2901171 forward MW:19278 4064108 4063716 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03791 product CDS SSU ribosomal protein S8p (S15Ae):2900625 forward MW:11949 4064628 4064323 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03792 product CDS SSU ribosomal protein S14p (S29e) ## Zinc-independent:2900018 forward MW:11473 4065181 4064642 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03793 product CDS LSU ribosomal protein L5p (L11e):2899699 forward MW:17490 4065516 4065202 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03794 product CDS LSU ribosomal protein L24p (L26e):2899139 forward MW:11287 4065896 4065528 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03795 product CDS LSU ribosomal protein L14p (L23e):2898813 forward MW:13410 4066186 4065920 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03796 product CDS SSU ribosomal protein S17p (S11e):2898421 forward MW:10096 4066380 4066189 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03797 product CDS LSU ribosomal protein L29p (L35e):2898152 forward MW:7172 4066793 4066380 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03798 product CDS LSU ribosomal protein L16p (L10e):2897961 forward MW:15430 4067492 4066806 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03799 product CDS SSU ribosomal protein S3p (S3e):2897535 forward MW:25753 4067838 4067506 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03800 product CDS LSU ribosomal protein L22p (L17e):2896835 forward MW:8914 4068127 4067852 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03801 product CDS SSU ribosomal protein S19p (S15e):2896489 forward MW:10275 4068968 4068144 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03802 product CDS LSU ribosomal protein L2p (L8e):2896197 forward MW:29750 4069282 4068983 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03803 product CDS LSU ribosomal protein L23p (L23Ae):2895358 forward MW:10944 4069881 4069279 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03804 product CDS LSU ribosomal protein L4p (L1e):2895062 forward MW:21941 4070529 4069894 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03805 product CDS LSU ribosomal protein L3p (L3e):2894447 forward MW:22607 4070922 4070611 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03806 product CDS SSU ribosomal protein S10p (S20e):2893730 forward MW:11766 4072257 4071064 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03807 product CDS Translation elongation factor Tu:2893277 forward MW:43333 4074394 4072289 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03808 product CDS Translation elongation factor G:2892052 forward MW:77171 4074895 4074425 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03809 product CDS SSU ribosomal protein S7p (S5e):2889916 forward MW:17665 4075389 4075018 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03810 product CDS SSU ribosomal protein S12p (S23e):2889323 forward MW:13725 4075523 4075389 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03811 product rpsL_psuedo 4079786 4075587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03812 product CDS DNA-directed RNA polymerase beta' subunit:2888754 forward MW:154718 4083924 4079851 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03813 product CDS DNA-directed RNA polymerase beta subunit:2884490 forward MW:150990 4084140 4084075 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03814 product P26 4084511 4084146 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03815 product CDS LSU ribosomal protein L7/L12 (P1/P2):2880195 forward MW:12420 4085091 4084591 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03816 product CDS LSU ribosomal protein L10p (P0):2879750 forward MW:17540 4085092 4085282 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03817 product P27 4085989 4085294 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03818 product CDS LSU ribosomal protein L1p (L10Ae):2879047 forward MW:24178 4086420 4085989 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03819 product CDS LSU ribosomal protein L11p (L12e):2878352 forward MW:14882 4087072 4086539 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03820 product CDS Transcription antitermination protein NusG:2877802 forward MW:17787 4087450 4087082 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03821 product CDS Preprotein translocase subunit SecE (TC 3.A.5.1.1):2877259 forward MW:13267 4087572 4087497 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03822 product tRNA-Trp(cca) 4087813 4087738 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03823 product tRNA-Thr(ggt) 4087913 4087840 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03824 product tRNA-Gly(tcc) 4088022 4087938 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03825 product tRNA-Tyr(gta) 4088594 4088166 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03826 product CDS: hypothetical protein 2875747:2876175 forward MW:16415 4089351 4088602 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03827 product CDS Pantothenate kinase type III, CoaX-like:2875739 forward MW:26599 4090087 4089341 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03828 product CDS Biotin-protein ligase / Biotin operon repressor:2875000 forward MW:23728 4090557 4090448 rRNA locus_tag NYT1canu_03829 product 5S ribosomal RNA score 2.4e-13 4093608 4090719 rRNA locus_tag NYT1canu_03830 product 23S ribosomal RNA score 0 4093929 4093854 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03831 product tRNA-Ala(tgc) 4094050 4093974 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03832 product tRNA-Ile(gat) 4095681 4094148 rRNA locus_tag NYT1canu_03833 product 16S ribosomal RNA score 0 4097402 4096191 CDS EC_number 6.1.1.1 gene tyrS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P41256 locus_tag NYT1canu_03834 product Tyrosine--tRNA ligase 4097604 4099028 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03835 product CDS Cell wall endopeptidase, family M23/M37:1137158 forward MW:51571 4099032 4100126 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03836 product CDS Anhydro-N-acetylmuramic acid kinase:1138256 forward MW:39549 4100540 4100190 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03837 product CDS probable iron binding protein from the HesB_IscA_SufA family:1138670 reverse MW:12518 4101765 4100731 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03838 product CDS N-acetyl-gamma-glutamyl-phosphate reductase:1139895 reverse MW:36727 4101899 4102327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03839 product CDS Hypothetical membrane protein, possible involvement in cytochrome functioning/assembly:1140457 forward MW:16599 4102426 4103358 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03840 product CDS: hypothetical protein 1140556:1141488 forward MW:33634 4103412 4104188 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03841 product CDS Oxidoreductase, short chain dehydrogenase/reductase family:1142318 forward MW:28189 4104293 4104631 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03842 product CDS Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical):1142761 forward MW:12683 4104753 4105400 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03843 product CDS 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase:1143530 forward MW:23656 4106255 4105461 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03844 product CDS S-adenosylmethionine decarboxylase proenzyme , prokaryotic class 1A:1144385 reverse MW:30115 4106920 4106498 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03845 product CDS OsmC/Ohr family protein:1145050 reverse MW:15218 4107130 4107774 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03846 product CDS Cyclic AMP receptor protein:1145904 forward MW:24087 4108481 4107786 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03847 product CDS Lipoate-protein ligase A:1146611 reverse MW:25323 4109352 4108516 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03848 product CDS Indole-3-glycerol phosphate synthase:1147482 reverse MW:30197 4110410 4109349 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03849 product CDS Anthranilate phosphoribosyltransferase:1148540 reverse MW:37639 4111019 4110420 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03850 product CDS Anthranilate synthase, amidotransferase component @ Para-aminobenzoate synthase, amidotransferase component(EC 2.6.1.85):1149149 reverse MW:21661 4111940 4111431 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03851 product CDS: hypothetical protein 1149561:1150070 reverse MW:18369 4112482 4111937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03852 product CDS: Lytic enzyme 1150067:1150612 reverse MW:19899 4113648 4112590 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03853 product CDS tail fiber assembly domain protein:1151685 reverse MW:35124 4114465 4113899 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03854 product CDS Putative tail fiber assembly protein p37:1152595 reverse MW:20992 4115933 4114473 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03855 product CDS Prophage long tail fiber protein:1154063 reverse MW:51801 4116543 4115944 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03856 product CDS: Prophage tail protein 1154074:1154673 reverse MW:22388 4117571 4116531 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03857 product CDS Phage FluMu protein gp47:1155701 reverse MW:37075 4117959 4117561 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03858 product CDS Bacteriophage protein GP46:1156089 reverse MW:15221 4118468 4117956 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03859 product CDS Prophage baseplate assembly protein V:1156598 reverse MW:17854 4119574 4118465 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03860 product CDS: Prophage tail protein 1156595:1157704 reverse MW:40327 4121002 4119578 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03861 product CDS Phage tail/DNA circulation protein:1159132 reverse MW:50282 4123143 4120999 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03862 product CDS Phage tail length tape-measure protein:1161273 reverse MW:74511 4123168 4123263 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03863 product hypothetical protein 4123570 4123274 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03864 product CDS: hypothetical protein 1161404:1161700 reverse MW:10586 4123914 4123567 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03865 product CDS Phage tail tube protein:1162044 reverse MW:12421 4125471 4123975 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03866 product CDS Bacteriophage tail sheath protein:1163601 reverse MW:53237 4125678 4125490 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03867 product CDS Mu-like prophage FluMu protein GP38:1163808 reverse MW:7003 4126265 4125675 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03868 product CDS: IS, phage, Tn; Transposon-related functions 1163805:1164395 reverse MW:21055 4126652 4126311 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03869 product CDS lipoprotein, putative:1164779 reverse MW:12369 4127019 4126630 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03870 product CDS Methyl-accepting chemotaxis protein:1165149 reverse MW:14156 4127775 4127338 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03871 product CDS: hypothetical protein 1165468:1165905 reverse MW:15763 4127872 4128576 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03872 product CDS: Putative cI prophage repressor protein 1166017:1166706 forward MW:25557 4128729 4128977 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03873 product CDS: hypothetical protein 1166859:1167107 forward MW:9055 4129075 4129341 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03874 product CDS transcriptional regulator PrtN, putative:1167471 forward MW:9071 4129448 4131370 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03875 product CDS Phospholipase/lecithinase/hemolysin:1169495 forward MW:69059 4129448 4129522 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4133072 4131591 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03876 product CDS Anthranilate synthase, aminase component:1171197 reverse MW:54269 4133960 4133142 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03877 product CDS Phosphoglycolate phosphatase:1172085 reverse MW:30075 4134631 4133957 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03878 product CDS Ribulose-phosphate 3-epimerase:1172756 reverse MW:24314 4135622 4134801 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03879 product CDS Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1):1173747 reverse MW:29361 4136881 4135634 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03880 product CDS Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1):1175006 reverse MW:45842 4137993 4136959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03881 product CDS ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1):1176118 reverse MW:37601 4137993 4137925 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4139200 4138076 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03882 product CDS Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1):1177325 reverse MW:41198 4140620 4139991 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03883 product CDS DNA-binding response regulator, LuxR family, near polyamine transporter:1178745 reverse MW:22797 4142665 4140617 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03884 product CDS Probable two-component sensor, near polyamine transporter:1180790 reverse MW:76167 4142744 4143730 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03885 product CDS: hypothetical protein 1180869:1181855 forward MW:35166 4142744 4142824 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 4144528 4143761 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03886 product CDS DnaJ-like protein DjlA:1182653 reverse MW:28133 4145200 4144529 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03887 product CDS: nucleotidyltransferase 1182654:1183343 reverse MW:25144 4146306 4145281 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03888 product CDS: Predicted phosphotransferase related to Ser/Thr protein kinases 1183406:1184431 reverse MW:38711 4146436 4149219 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03889 product CDS Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor:1187344 forward MW:104598 4146436 4146537 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 34 product putative signal peptide 4149200 4150522 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03890 product CDS Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA):1188647 forward MW:48377 4149200 4149277 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 4150519 4151508 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03891 product CDS 4-hydroxythreonine-4-phosphate dehydrogenase:1189633 forward MW:35054 4151505 4152311 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03892 product CDS Dimethyladenosine transferase:1190436 forward MW:29963 4152425 4152805 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03893 product CDS ApaG protein:1190930 forward MW:13948 4152805 4153707 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03894 product CDS Bis(5'-nucleosyl)-tetraphosphatase, symmetrical:1191832 forward MW:33566 4153704 4154024 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03895 product CDS Thiosulfate sulfurtransferase GlpE:1192149 forward MW:11607 4154310 4156232 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03896 product CDS Serine protein kinase (prkA protein), P-loop containing:1194357 forward MW:73527 4156354 4157625 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03897 product CDS: hypothetical protein 1194479:1195750 forward MW:48609 4157622 4159184 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03898 product CDS: SpoVR-like protein 1195747:1197309 forward MW:61147 4159282 4160511 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03899 product CDS tRNA nucleotidyltransferase (EC 2.7.7.25):1198636 forward MW:45885 4161305 4160781 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03900 product CDS 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase:1199430 reverse MW:19242 4161649 4161296 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03901 product CDS Dihydroneopterin aldolase:1199774 reverse MW:12969 4161724 4162293 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03902 product CDS Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY:1200418 forward MW:20106 4163371 4162346 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03903 product CDS YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA:1201496 reverse MW:36437 4163569 4163784 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03904 product CDS SSU ribosomal protein S21p:1201909 forward MW:8385 4164254 4166212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03905 product CDS DNA primase:1204337 forward MW:72879 4166280 4168130 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03906 product CDS RNA polymerase sigma factor RpoD:1206255 forward MW:69463 4168387 4170876 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03907 product CDS sensory box/GGDEF domain/EAL domain protein:1209001 forward MW:91734 4170892 4170968 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_03908 product tRNA-Met(cat) 4171096 4171215 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03909 product hypothetical protein 4171682 4171173 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03910 product CDS ISPsy12, transposase OrfB:1209492 reverse MW:7510 4172335 4172027 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03911 product CDS ISPsy12, transposase OrfA:1210460 reverse MW:11819 4172927 4174297 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03912 product CDS metallophosphoesterase:1212422 forward MW:51429 4174290 4175318 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03913 product CDS hypothetical protein:1213443 forward MW:38341 4175315 4176346 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03914 product CDS hypothetical protein:1214471 forward MW:37492 4176343 4177185 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_03915 product hypothetical protein 4177190 4179802 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03916 product CDS hypothetical protein:1217927 forward MW:95725 4181682 4179952 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03917 product CDS hypothetical protein:1220143 reverse MW:78454 4183105 4182728 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03918 note CDS protein of unknown function DUF1311 1220853:1221230 reverse MW:13889 product hypothetical protein 4183105 4183046 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 4183888 4183163 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03919 product CDS N-acetylmuramoyl-L-alanine amidase:1222013 reverse MW:25901 4185206 4184010 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03920 product CDS: hypothetical protein 1222135:1223331 reverse MW:43985 4185457 4185206 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03921 product CDS: hypothetical protein 1223331:1223582 reverse MW:9045 4186213 4185638 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03922 product CDS: hypothetical protein 1223763:1224338 reverse MW:21958 4186677 4186210 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03923 product CDS Excisionase domain protein:1224802 reverse MW:17234 4186979 4187452 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03924 product CDS hypothetical protein:1225577 forward MW:18048 4187498 4188091 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03925 product CDS lipoprotein, putative:1226216 forward MW:21857 4187498 4187566 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4189560 4188262 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03926 product CDS peptidase, M20/M25/M40 family:1227685 reverse MW:46219 4189560 4189501 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 4189807 4190937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03927 product CDS Fic family protein:1229062 forward MW:42295 4192188 4190962 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03928 product CDS: hypothetical protein 1229087:1230313 reverse MW:45699 4192511 4192188 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03929 product CDS DNA-binding protein:1230636 reverse MW:12322 4192821 4193897 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03930 product CDS membrane protein, putative:1232022 forward MW:37187 4193909 4194370 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03931 product CDS Transcriptional regulator, AsnC family:1232495 forward MW:16645 4194522 4196201 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03932 product CDS Lysine 2-monooxygenase:1234326 forward MW:62423 4196219 4197025 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03933 product CDS 5-aminopentanamidase:1235150 forward MW:29482 4197265 4199601 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03934 product CDS Similar to pyrroloquinoline quinone biosynthesis protein F:1237726 forward MW:86139 4199909 4200820 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03935 product CDS Coenzyme PQQ synthesis protein B:1238945 forward MW:33403 4200829 4201584 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03936 product CDS Coenzyme PQQ synthesis protein C:1239709 forward MW:29104 4201581 4201877 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03937 product CDS Coenzyme PQQ synthesis protein D:1240002 forward MW:11347 4201870 4203039 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03938 product CDS Coenzyme PQQ synthesis protein E:1241164 forward MW:43929 4203002 4204834 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03939 product CDS Coenzyme PQQ synthesis protein F:1242959 forward MW:66642 4205037 4204876 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03940 product CDS Stress induced hydrophobic peptide:1243162 reverse MW:5912 4205363 4205242 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_03941 product RsmY 4207230 4205452 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03942 product CDS Acyl-CoA dehydrogenase:1245355 reverse MW:64162 4208698 4207400 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03943 product CDS GGDEF domain protein:1246823 reverse MW:48350 4210960 4209155 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03944 product CDS Acyl-CoA dehydrogenase:1249085 reverse MW:65330 4211605 4211309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03945 product CDS: hypothetical protein 1249434:1249730 reverse MW:10461 4212440 4211760 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03946 product CDS Dethiobiotin synthetase:1250574 reverse MW:23937 4213293 4212472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03947 product CDS Biotin synthesis protein bioC:1251406 reverse MW:29469 4214005 4213274 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03948 product CDS Biotin synthesis protein bioH:1252130 reverse MW:25730 4215188 4213998 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03949 product CDS 8-amino-7-oxononanoate synthase:1253313 reverse MW:42400 4216310 4215252 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03950 product CDS Biotin synthase:1254435 reverse MW:38596 4216401 4217135 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03951 product CDS Competence protein F , phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy:1255260 forward MW:27489 4217327 4218091 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03952 product CDS DNA-binding domain of ModE / Molybdate-binding domain of ModE:1256216 forward MW:27268 4218170 4220089 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03953 product CDS Putative phosphatase:1258214 forward MW:69275 4221061 4220228 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03954 product CDS 3',5'-cyclic-nucleotide phosphodiesterase:1259186 reverse MW:30924 4222117 4221086 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03955 product CDS Maltose maltodextrin transport ATP-binding protein malK:1260242 reverse MW:36992 4222908 4222114 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03956 product CDS ABC transporter permease protein:1261033 reverse MW:28620 4223774 4222905 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03957 product CDS ABC transporter, permease protein:1261899 reverse MW:30422 4224775 4223774 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03958 product CDS ABC-type Fe3+ transport system, periplasmic component:1262900 reverse MW:35913 4224775 4224707 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4225778 4224759 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03959 product CDS transcriptional repressor, LacI family:1263903 reverse MW:37239 4225974 4226948 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03960 product CDS YihE protein, required for LPS synthesis:1265073 forward MW:37198 4227074 4227961 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03961 product CDS Protein rarD:1266086 forward MW:32780 4228321 4228623 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03962 product CDS: hypothetical protein 1266446:1266748 forward MW:11048 4229161 4228643 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03963 product CDS ACT domain protein:1267286 reverse MW:18337 4229484 4231661 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03964 product CDS Malate synthase G:1269786 forward MW:80985 4232074 4232586 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03965 product CDS: hypothetical protein 1270199:1270711 forward MW:18789 4232593 4233519 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03966 product CDS hypothetical protein:4910655 reverse MW:34675 4233516 4233959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03967 product CDS: hypothetical protein 1271821:1272084 forward MW:10032 4234399 4234830 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03968 product CDS: hypothetical protein 1272716:1272955 forward MW:8640 4235180 4239268 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03969 product CDS: hypothetical protein 1273305:1277393 forward MW:149506 4239793 4239347 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03970 product CDS response regulator:1277918 reverse MW:16361 4239990 4241957 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03971 product CDS Predicted signal-transduction protein containing cAMP-binding and CBS domains:1280082 forward MW:73460 4241954 4242667 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03972 product CDS DNA polymerase III epsilon subunit:1280792 forward MW:26778 4243049 4242747 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03973 product CDS: hypothetical protein 1280872:1281174 reverse MW:10855 4243279 4243046 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03974 product CDS: hypothetical protein 1281171:1281404 reverse MW:8212 4243700 4245325 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03975 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):1283450 forward MW:58428 4246593 4245490 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03976 product CDS Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain:1284718 reverse MW:40995 4247377 4248324 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03977 product CDS L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1):1286449 forward MW:34474 4247377 4247442 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4248392 4249237 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03978 product CDS L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1):1287362 forward MW:30446 4249234 4250412 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03979 product CDS L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1):1288537 forward MW:43326 4250669 4251922 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03980 product CDS Serine hydroxymethyltransferase:1290047 forward MW:44889 4251940 4253190 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03981 product CDS Sarcosine oxidase beta subunit:1291315 forward MW:45354 4253206 4253502 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03982 product CDS Sarcosine oxidase delta subunit:1291627 forward MW:11420 4253499 4256519 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03983 product CDS Sarcosine oxidase alpha subunit:1294644 forward MW:109740 4256556 4257188 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03984 product CDS Sarcosine oxidase gamma subunit:1295313 forward MW:22974 4257359 4258216 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03985 product CDS Formyltetrahydrofolate deformylase:1296341 forward MW:32279 4258318 4259517 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03986 product CDS Glutathione-independent formaldehyde dehydrogenase:1297642 forward MW:41816 4260658 4259666 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03987 product CDS YD repeat protein:1298783 reverse MW:36332 4262047 4261082 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03988 product CDS YD repeat protein:1300172 reverse MW:34960 4262278 4262841 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03989 product CDS: hypothetical protein 1300403:1300966 forward MW:18492 4262278 4262346 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4263720 4262821 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03990 product CDS Acyltransferase family protein:1301845 reverse MW:33911 4263914 4264417 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03991 product CDS Ribosomal protein S6 glutaminyl transferase:1302542 forward MW:18541 4263914 4263967 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 18 product putative signal peptide 4265296 4264667 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03992 product CDS Glutathione S-transferase family protein:1303421 reverse MW:23692 4265548 4265366 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03993 product CDS: hypothetical protein 1303491:1303673 reverse MW:6425 4266678 4265545 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03994 product CDS putative iron-regulated membrane protein:1304803 reverse MW:41516 4267791 4266799 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03995 product CDS Transmembrane sensor:1305916 reverse MW:36193 4268306 4267788 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03996 product CDS RNA polymerase sigma-70 factor, ECF subfamily:1306389 reverse MW:18103 4270176 4268470 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03997 product CDS Choline dehydrogenase:1308301 reverse MW:62765 4271789 4270317 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03998 product CDS Betaine aldehyde dehydrogenase:1309914 reverse MW:53174 4272488 4271895 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_03999 product CDS HTH-type transcriptional regulator BetI:1310613 reverse MW:22008 4274212 4272824 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04000 product CDS probable integral membrane protein 1310949:1312337 reverse MW:50579 4275584 4274205 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04001 product CDS probable integral membrane protein 1312330:1313709 reverse MW:50084 4275599 4276222 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04002 product CDS Dihydrofolate reductase:1314347 forward MW:22021 4276413 4277471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04003 product CDS Phosphoserine phosphatase:1315596 forward MW:39486 4276413 4276481 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4278248 4277514 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04004 product CDS tRNA (guanine46-N7-)-methyltransferase:1316373 reverse MW:27569 4279053 4278259 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04005 product CDS Thiazole biosynthesis protein ThiG:1317178 reverse MW:28292 4279305 4279105 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04006 product CDS Sulfur carrier protein ThiS:1317430 reverse MW:7149 4279794 4279414 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04007 product CDS 1317539:1317919 reverse MW:13262 4279875 4280585 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04008 product CDS Monofunctional biosynthetic peptidoglycan transglycosylase:1318710 forward MW:26884 4281660 4280806 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04009 product CDS RNA polymerase sigma factor RpoH:1319785 reverse MW:32586 4282813 4281779 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04010 product CDS Cell division protein FtsX:1320938 reverse MW:37155 4283481 4282810 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04011 product CDS Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1):1321606 reverse MW:24611 4285019 4283478 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04012 product CDS Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1):1323144 reverse MW:54253 4285275 4286627 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04013 product CDS: peptidase, M16 family 1323400:1324752 forward MW:50103 4285275 4285349 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4286624 4288117 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04014 product CDS: Zinc protease 1324749:1326242 forward MW:52339 4286624 4286716 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 4288117 4288701 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04015 product CDS Methyltransferase:1326826 forward MW:21085 4289256 4289549 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04016 product CDS HigA protein (antitoxin to HigB):1327674 forward MW:10835 4289663 4290697 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04017 product CDS Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase:1328822 forward MW:38157 4291562 4290705 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04018 product CDS Thiosulfate sulfurtransferase, rhodanese:1329729 reverse MW:32240 4292278 4291616 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04019 product CDS Transcriptional regulator, TetR family:1330403 reverse MW:25830 4292556 4293983 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04020 product CDS Aldehyde dehydrogenase ; Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68):1332108 forward MW:52476 4294151 4294630 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04021 product CDS Phosphopantetheine adenylyltransferase:1332755 forward MW:17885 4294721 4294972 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04022 product CDS 4Fe-4S ferredoxin, iron-sulfur binding:1333097 forward MW:9391 4295319 4294981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04023 product CDS Cation/multidrug efflux pump:1333444 reverse MW:11245 4295319 4295245 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4296221 4295409 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04024 product CDS Formamidopyrimidine-DNA glycosylase:1334346 reverse MW:30217 4297133 4296267 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04025 product CDS Predicted signal transduction protein:1335258 reverse MW:32018 4297378 4298574 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04026 product CDS LSU methyltransferase RlmI 1335503:1336699 forward MW:43833 4299493 4298747 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04027 product CDS TraX family protein:1337618 reverse MW:27666 4299594 4300634 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04028 product CDS Low-specificity L-threonine aldolase:1338759 forward MW:38087 4300758 4302200 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04029 product CDS TldD family protein, Beta/Gamma-proteobacterial subgroup:1340325 forward MW:51961 4302200 4303525 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04030 product CDS TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup:1341650 forward MW:48883 4303535 4304947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04031 product CDS Permeases of the major facilitator superfamily:1343072 forward MW:50062 4305196 4307889 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04032 product CDS Sensory box/GGDEF family protein:1346014 forward MW:100788 4308040 4308687 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04033 product CDS Peptide methionine sulfoxide reductase MsrA:1346812 forward MW:23288 4309752 4308916 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04034 product CDS Protein involved in catabolism of external DNA:1347877 reverse MW:31809 4309996 4310079 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04035 product C4 4310130 4310360 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04036 product CDS: hypothetical protein 1348255:1348485 forward MW:8474 4310489 4310755 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04037 note CDS conserved domain protein 1348614:1348880 forward MW:9323 product hypothetical protein 4311983 4310883 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04038 product CDS GbcB Glycine betaine demethylase subunit B:1350108 reverse MW:40421 4312281 4313579 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04039 product CDS GbcA Glycine betaine demethylase subunit A:1351704 forward MW:48990 4313782 4315611 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04040 product CDS Chitinase:1353736 forward MW:67507 4316992 4316195 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04041 product CDS Electron transfer flavoprotein, beta subunit:1355117 reverse MW:27714 4318202 4316982 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04042 product CDS Electron transfer flavoprotein, alpha subunit:1356327 reverse MW:43303 4320163 4318202 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04043 product CDS Iron-sulfur cluster-binding protein:1358336 reverse MW:72819 4322353 4320293 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04044 product CDS DgcA Dimethylglycine demethylase subunit A:1360478 reverse MW:75436 4322899 4322369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04045 product CDS: hypothetical protein 1360494:1361024 reverse MW:19699 4323960 4322983 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04046 product CDS Microsomal dipeptidase:1362085 reverse MW:36007 4324189 4324599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04047 product CDS: hypothetical protein 1362314:1362724 forward MW:15057 4324189 4324251 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 4324655 4325074 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04048 product CDS: hypothetical protein 1362780:1363199 forward MW:15047 4326296 4325232 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04049 product CDS Fructose-bisphosphate aldolase class II:1364421 reverse MW:38594 4326736 4326410 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04050 product CDS lipoprotein, putative:1364861 reverse MW:11856 4327056 4326823 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04051 product CDS: hypothetical protein 1364948:1365181 reverse MW:8445 4327056 4326985 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 4328247 4327084 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04052 product CDS Phosphoglycerate kinase:1366372 reverse MW:40326 4329313 4328270 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04053 product CDS D-erythrose-4-phosphate dehydrogenase:1367333 reverse MW:34425 4331454 4329457 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04054 product CDS Transketolase:1369579 reverse MW:72496 4331714 4332709 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04055 product CDS Transcriptional regulator, ArsR family / Methyltransferase fusion:1370834 forward MW:36052 4332730 4333920 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04056 product CDS S-adenosylmethionine synthetase:1372045 forward MW:42587 4334143 4335834 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04057 product CDS DNA ligase:1373959 forward MW:62244 4334143 4334217 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4335875 4336285 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04058 product CDS Protein yqjC precursor:1374410 forward MW:15144 4335875 4335943 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4336740 4336339 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04059 product CDS probable membrane protein 1374464:1374865 reverse MW:14065 4338246 4336855 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04060 product CDS Heavy metal sensor histidine kinase:1376371 reverse MW:52029 4338917 4338243 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04061 product CDS DNA-binding heavy metal response regulator:1377042 reverse MW:25773 4339171 4340397 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04062 product CDS Heavy metal RND efflux outer membrane protein, CzcC family:1378522 forward MW:44320 4339171 4339236 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4340465 4341733 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04063 product CDS Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family:1379858 forward MW:45100 4341758 4344919 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04064 product CDS Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA:1383044 forward MW:113669 4345223 4345810 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04065 product CDS: hypothetical protein 1383348:1383935 forward MW:21495 4345923 4348793 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04066 product CDS Rhs family protein:6106234 reverse MW:12898 4349616 4348858 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04067 product CDS: hypothetical protein 6091714:6093267 reverse MW:54261 4350044 4350292 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04068 product hypothetical protein 4350430 4351164 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04069 product CDS Rhs family protein:5902609 reverse MW:36240 4351142 4351594 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04070 product hypothetical protein 4351924 4352655 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04071 product CDS Rhs family protein:5902609 reverse MW:36240 4352633 4353307 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04072 product CDS Rhs family protein:5902609 reverse MW:36240 4353294 4353866 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04073 product hypothetical protein 4353890 4354108 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04074 product hypothetical protein 4354098 4354298 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04075 product hypothetical protein 4354687 4354872 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04076 product hypothetical protein 4354869 4355141 CDS gene cdi inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P11899 locus_tag NYT1canu_04077 product Colicin-D immunity protein 4355158 4355469 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04078 product hypothetical protein 4355874 4356869 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04079 product CDS Rhs family protein:5902609 reverse MW:36240 4358048 4357071 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04080 product CDS IS1479 transposase 6015788:6016804 forward MW:38512 4360944 4359757 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04081 product CDS: hypothetical protein 5987881:5989068 reverse MW:44516 4362402 4361026 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04082 product CDS MATE efflux family protein:5990526 reverse MW:48234 4363929 4362604 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04083 product CDS Outer membrane porin, OprD family:5992053 reverse MW:48554 4363929 4363864 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4364572 4364351 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04084 product CDS: hypothetical protein 5992475:5992696 reverse MW:7965 4364572 4364504 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4364792 4365121 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04085 product CDS: hypothetical protein 5992916:5993245 forward MW:12238 4364792 4364857 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4365399 4365971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04086 product CDS Na+/H+ antiporter NhaP:5994095 forward MW:20895 4366307 4367875 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04087 product CDS Phage protein:5995999 forward MW:59684 4367959 4368711 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04088 product CDS NAD-dependent protein deacetylase of SIR2 family:5996835 forward MW:6606 4369254 4370276 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04089 product CDS ISPsy4, transposase:6120546 reverse MW:37529 4370273 4371082 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04090 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 4371342 4371115 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04091 product hypothetical protein 4371562 4371918 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04092 product CDS Arsenical resistance operon repressor:5673466 forward MW:13238 4371943 4373226 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04093 product CDS Arsenic efflux pump protein:5674774 forward MW:45551 4373243 4373713 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04094 product CDS Arsenate reductase:5675261 forward MW:16328 4373761 4374474 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04095 product CDS Arsenic resistance protein ArsH:5676022 forward MW:27101 4374495 4374917 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04096 product CDS Arsenate reductase:5676465 forward MW:15626 4374955 4376028 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04097 product CDS monooxygenase, putative:5677576 forward MW:38483 4376028 4377215 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04098 product CDS major facilitator superfamily MFS_1:5678763 forward MW:40887 4377753 4377196 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04099 product CDS phosphinothricin N-acetyltransferase:3803628 forward MW:18089 4378705 4378914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04100 product CDS hypothetical protein:5680462 forward MW:7314 4378705 4378770 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4378997 4380928 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04101 product CDS Multicopper oxidase:5682476 forward MW:71372 4380939 4381880 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04102 product CDS Copper resistance protein B:3370612 reverse MW:31096 4380939 4381028 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 4381954 4382337 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04103 product CDS Copper resistance protein C precursor:5683885 forward MW:13134 4381954 4382031 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 4382340 4383275 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04104 product CDS Copper resistance protein D:5684823 forward MW:32866 4383824 4383324 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04105 product CDS CopG protein:5685312 reverse MW:15672 4383824 4383702 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 41 product putative signal peptide 4384040 4384723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04106 product CDS DNA-binding heavy metal response regulator:2592102 reverse MW:26312 4384720 4386108 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04107 product CDS Heavy metal sensor histidine kinase:5687656 forward MW:50870 4386105 4386551 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04108 product hypothetical protein 4386651 4387907 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04109 product CDS Heavy metal RND efflux outer membrane protein, CzcC family:5689455 forward MW:45264 4386651 4386734 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 4387904 4389388 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04110 product CDS Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family:5690936 forward MW:52535 4389385 4392543 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04111 product CDS Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA:5694091 forward MW:111032 4392540 4392890 CDS gene cusF inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P77214 locus_tag NYT1canu_04112 product Cation efflux system protein CusF 4392540 4392605 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4393497 4393072 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04113 product CDS Bacterial/Archaeal Transporter family protein:5695045 reverse MW:15003 4394137 4393607 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04114 product CDS Inorganic pyrophosphatase:5695685 reverse MW:19506 4395777 4394494 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04115 product CDS Enolase:5697325 reverse MW:46079 4396192 4395851 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04116 product hypothetical protein 4396562 4396296 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04117 product CDS: hypothetical protein 5697844:5698038 reverse MW:6979 4396927 4396604 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04118 product CDS: hypothetical protein 5698152:5698475 reverse MW:11758 4397376 4397011 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04119 product CDS: hypothetical protein 5698559:5698834 reverse MW:10227 4398719 4397373 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04120 product CDS Chloride channel protein:5700267 reverse MW:47931 4399292 4398969 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04121 product CDS: hypothetical protein 5700517:5700840 reverse MW:12305 4399686 4399303 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04122 product CDS Protein crcB:5701234 reverse MW:13337 4400574 4401536 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04123 product hypothetical protein 4401912 4401793 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04124 product CDS hypothetical protein:5703460 reverse MW:4467 4402052 4403074 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04125 product CDS ISPsy4, transposase:6120546 reverse MW:37529 4403071 4403880 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04126 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 4404545 4404180 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04127 product hypothetical protein 4404563 4405006 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04128 product CDS: hypothetical protein 4780724:4780960 forward MW:8942 4404960 4405121 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04129 product hypothetical protein 4406319 4405123 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04130 product CDS hypothetical protein:4782258 reverse MW:44140 4407233 4406361 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04131 product CDS: hypothetical protein 4782315:4783187 reverse MW:32139 4407920 4407531 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04132 product CDS hypothetical protein:3467034 forward MW:6204 4408378 4407923 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04133 product CDS hypothetical protein:4784167 reverse MW:10497 4408829 4408434 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04134 product CDS hypothetical protein:3466080 forward MW:4266 4408987 4409442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04135 product CDS hypothetical protein:4785396 forward MW:7170 4410526 4409486 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04136 product CDS: hypothetical protein 4785440:4786480 reverse MW:39029 4411140 4410616 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04137 product hypothetical protein 4411675 4411199 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04138 product hypothetical protein 4411881 4411672 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04139 product hypothetical protein 4413833 4411938 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04140 product CDS Pathogenesis-related protein:4789787 reverse MW:71093 4416133 4413830 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04141 product CDS: hypothetical protein 4789784:4792075 reverse MW:85396 4416365 4417027 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04142 product hypothetical protein 4417046 4417261 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04143 product hypothetical protein 4417780 4417947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04144 product CDS hypothetical protein:4793901 forward MW:5569 4418042 4420255 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04145 product CDS: hypothetical protein 4793996:4796209 forward MW:82927 4420592 4420407 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04146 product hypothetical protein 4421143 4420592 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04147 product hypothetical protein 4421816 4423228 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04148 product CDS phage integrase:4799181 forward MW:53475 4423228 4425147 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04149 product CDS hypothetical protein:4801100 forward MW:72476 4425147 4426343 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04150 product CDS hypothetical protein:4802296 forward MW:45227 4426733 4427110 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04151 product hypothetical protein 4427107 4427505 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04152 product hypothetical protein 4427973 4428698 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04153 product CDS Na+/H+ antiporter NhaP:4804651 forward MW:26014 4429598 4428699 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04154 product CDS Transcriptional regulator of various polyols utilization, AraC family:4805551 reverse MW:33785 4429880 4431196 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04155 product CDS Various polyols ABC transporter, periplasmic substrate-binding protein:4807149 forward MW:47983 4429880 4429954 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4431236 4432009 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04156 product CDS Multiple polyol-specific dehydrogenase:4807962 forward MW:27151 4432133 4432957 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04157 product CDS Glycerol-3-phosphate regulon repressor:4808910 forward MW:29378 4434878 4433058 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04158 product CDS GTP-binding protein TypA/BipA:4810831 reverse MW:66910 4436475 4435021 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04159 product CDS Thiamine biosynthesis protein thiI:4812428 reverse MW:54356 4436811 4438217 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04160 product CDS Glutamine synthetase type I:4814170 forward MW:48421 4438383 4438796 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04161 product CDS: hypothetical protein 4814306:4814749 forward MW:15907 4438383 4438445 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 4438925 4439482 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04162 product CDS Periplasmic chorismate mutase I precursor:4815435 forward MW:20523 4438925 4438993 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4439561 4440103 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04163 product CDS: hypothetical protein 4815475:4816056 forward MW:21112 4439561 4439617 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 4440100 4440732 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04164 product CDS: hypothetical protein 4816068:4816685 forward MW:22743 4440100 4440171 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 4441016 4442101 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04165 product CDS Nitrogen regulation protein NR(II):4818054 forward MW:39988 4442098 4443534 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04166 product CDS Nitrogen regulation protein NR(I):4819487 forward MW:53136 4444752 4443715 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04167 product CDS Oxidoreductase, aldo/keto reductase family:4820705 reverse MW:38093 4445770 4444835 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04168 product CDS ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components:4821723 reverse MW:33868 4445770 4445702 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4447226 4445901 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04169 product CDS Nitrilotriacetate monooxygenase component A:4823179 reverse MW:47811 4448629 4447262 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04170 product CDS TonB-dependent receptor:4825416 reverse MW:80050 4449529 4448633 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04171 product CDS TonB-dependent receptor:4825416 reverse MW:80050 4449798 4450796 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04172 product CDS Transcriptional regulator, LacI family:4826749 forward MW:37587 4451850 4450900 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04173 product CDS Homoserine kinase:4827803 reverse MW:35423 4452174 4451887 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04174 product CDS: hypothetical protein 4827840:4828127 reverse MW:10715 4452174 4452106 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4452249 4455014 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04175 product CDS DNA polymerase I:4830967 forward MW:100899 4455141 4455258 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04176 product Pseudomon-1 4455895 4455260 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04177 product CDS GTP-binding protein EngB:4831848 reverse MW:23457 4456189 4456833 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04178 product CDS Periplasmic thiol:disulfide interchange protein DsbA:4832786 forward MW:23340 4456189 4456257 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4456843 4457718 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04179 product CDS Endonuclease/exonuclease/phosphatase family protein:4833671 forward MW:32494 4457715 4459748 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04180 product CDS GGDEF domain protein:4835701 forward MW:75468 4459844 4460623 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04181 product CDS N-acetylmuramoyl-L-alanine amidase:4836576 forward MW:29142 4459844 4459909 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4460883 4461161 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04182 product CDS YefM protein (antitoxin to YoeB):4837114 forward MW:10236 4461133 4461435 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04183 product CDS YoeB toxin protein:4837388 forward MW:11327 4463311 4461524 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04184 product CDS Sensory box histidine kinase:4839264 reverse MW:66377 4464668 4463322 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04185 product CDS Alginate biosynthesis transcriptional regulatory protein algB:4840621 reverse MW:49514 4464866 4465705 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04186 note CDS Conserved domain protein 4840819:4841658 forward MW:29480 product hypothetical protein 4464866 4464940 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4465935 4466222 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04187 product CDS: hypothetical protein 4841888:4842175 forward MW:10641 4466282 4466446 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04188 product CDS probable exported protein 4842235:4842399 forward MW:5738 4466449 4466916 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04189 product CDS Inhibitor of vertebrate lysozyme precursor:4842869 forward MW:17296 4466449 4466517 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4468476 4467166 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04190 product CDS Osmolarity sensory histidine kinase EnvZ:4844429 reverse MW:48625 4469380 4468640 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04191 product CDS Two-component system response regulator OmpR:4845333 reverse MW:27276 4469680 4472001 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04192 product CDS Transcription accessory protein (S1 RNA-binding domain):4847954 forward MW:84574 4472001 4472384 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04193 product CDS Uncharacterized protein, possibly involved in aromatic compounds catabolism:4848337 forward MW:13700 4472628 4474217 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04194 product CDS Glutamate--cysteine ligase:4850170 forward MW:60097 4475639 4474341 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04195 product CDS N-acetylglutamate synthase:4851592 reverse MW:47919 4476911 4475763 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04196 product CDS Acetylornithine deacetylase:4852864 reverse MW:41371 4477074 4478441 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04197 product CDS Adenylate cyclase:4854394 forward MW:51937 4479945 4479466 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04198 product CDS Transcriptional regulator, AsnC family:5538198 forward MW:17957 4480071 4480418 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04199 product CDS: hypothetical protein 5537246:5537593 reverse MW:12613 4480529 4482313 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04200 product CDS Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB:5537135 reverse MW:66447 4482453 4482773 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04201 product CDS Ribonucleotide reductase, alpha subunit:5535211 reverse MW:11287 4482453 4482521 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4483241 4482855 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04202 product CDS Glycine cleavage system H protein:5534809 forward MW:13329 4484367 4483285 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04203 product CDS Aminomethyltransferase (glycine cleavage system T protein):5534379 forward MW:39665 4486138 4484522 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04204 product CDS Ferric iron ABC transporter, permease protein:5533142 forward MW:58635 4487348 4486347 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04205 product CDS Ferric iron ABC transporter, iron-binding protein:5531317 forward MW:36532 4487348 4487280 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4488171 4487467 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04206 product CDS transcriptional regulator, Crp/Fnr family:5530197 forward MW:26617 4488256 4488780 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04207 product CDS Predicted membrane protein:5529408 reverse MW:18875 4490023 4489043 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04208 product CDS Sulfate and thiosulfate import ATP-binding protein CysA:5528621 forward MW:36740 4490898 4490026 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04209 product CDS Sulfate transport system permease protein CysW:5527638 forward MW:31475 4491733 4490912 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04210 product CDS Sulfate transport system permease protein CysT:5526752 forward MW:29632 4492844 4491828 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04211 product CDS Sulfate and thiosulfate binding protein CysP:5525836 forward MW:37111 4492844 4492776 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4493173 4492991 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04212 product CDS: hypothetical protein 5524491:5524673 forward MW:6720 4495295 4493364 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04213 product CDS Sensory box/GGDEF domain/EAL domain protein:5524300 forward MW:66571 4495452 4496636 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04214 product CDS Fatty acid desaturase ; Delta-9 fatty acid desaturase (EC 1.14.19.1):5522212 reverse MW:45439 4496770 4497768 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04215 product CDS Sensory box/GGDEF family protein:5520894 reverse MW:37278 4499532 4498144 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04216 product CDS response regulator:5519520 forward MW:48610 4500972 4499692 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04217 product CDS 5-aminovalerate aminotransferase / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)5516692:5517972 forward MW:45002 4501077 4501018 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04218 product gabT 4502598 4501156 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04219 product CDS Glutarate-semialdehyde dehydrogenase ; Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16):5516508 forward MW:51459 4503497 4502862 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04220 product CDS L-lysine permease:5514802 forward MW:22148 4504556 4503540 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04221 product CDS Oxidoreductase:5514124 forward MW:38256 4504978 4505054 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_04222 product tRNA-Arg(ccg) 4505785 4506501 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04223 product CDS hypothetical protein:5511402 reverse MW:9078 4506579 4507022 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04224 product hypothetical protein 4507696 4509612 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04225 product CDS hypothetical protein:5509968 reverse MW:69952 4510227 4510562 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04226 product CDS hypothetical protein:5507365 reverse MW:9707 4510227 4510283 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 4510720 4511484 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04227 product CDS Permeases of the major facilitator superfamily:5506944 reverse MW:26698 4511668 4512033 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04228 product CDS MvaT-like transcriptional regulator:5505996 reverse MW:13832 4512318 4513181 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04229 product CDS Methionine aminopeptidase:5505346 reverse MW:30811 4513402 4513758 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04230 product CDS hypothetical protein:5504133 reverse MW:7657 4513775 4514215 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04231 product CDS Integral membrane protein:5503697 reverse MW:8736 4514501 4514316 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04232 product CDS hypothetical protein:5503348 forward MW:6407 4514501 4514406 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 4515760 4514885 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04233 product hypothetical protein 4517116 4516013 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04234 product CDS ISPsy19, transposase:6133168 forward MW:41651 4517738 4517151 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04235 product CDS Anthranilate synthase, amidotransferase component @ Para-aminobenzoate synthase, amidotransferase component(EC 2.6.1.85):1149149 reverse MW:21661 4519210 4517735 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04236 product CDS Anthranilate synthase, aminase component:5423526 reverse MW:54725 4519615 4519514 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04237 product hypothetical protein 4519920 4520594 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04238 product CDS HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1:5424910 forward MW:24643 4520830 4521963 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04239 product CDS DNA-binding protein:5426279 forward MW:41935 4522254 4522000 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04240 product CDS: hypothetical protein 5426316:5426570 reverse MW:8893 4522808 4522338 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04241 product CDS Transcriptional regulator, AsnC family:5427124 reverse MW:17258 4523204 4524358 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04242 product CDS Cysteine desulfurase:5428674 forward MW:40543 4525538 4526359 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04243 product CDS Ferric siderophore transport system, periplasmic binding protein TonB:5430675 forward MW:28560 4526410 4527117 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04244 product CDS MotA/TolQ/ExbB proton channel family protein:5431433 forward MW:25258 4527117 4527518 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04245 product CDS Biopolymer transport protein ExbD/TolR:5431834 forward MW:14493 4527618 4530443 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04246 product CDS TonB-dependent receptor:5434759 forward MW:100877 4530588 4532471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04247 product CDS ABC transporter, periplasmic substrate-binding protein:5436787 forward MW:70759 4530588 4530668 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 4532473 4533540 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04248 product CDS Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1):5437856 forward MW:38730 4533540 4534562 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04249 product CDS Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1):5438878 forward MW:37745 4534564 4536147 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04250 product CDS Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1):5440463 forward MW:58583 4537672 4536176 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04251 product CDS Methyl-accepting chemotaxis protein:5441988 reverse MW:53475 4538214 4538606 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04252 product CDS Transposase:5442916 forward MW:8070 4539123 4538635 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04253 product CDS Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system:5443433 reverse MW:18496 4539845 4539171 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04254 product CDS: hypothetical protein 5443481:5444155 reverse MW:25405 4541213 4539909 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04255 product CDS Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase:5445523 reverse MW:46677 4541498 4542427 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04256 product CDS D-3-phosphoglycerate dehydrogenase:5446737 forward MW:34275 4544147 4542690 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04257 product CDS Succinate-semialdehyde dehydrogenase [NADP+]:5448457 reverse MW:51989 4545419 4544262 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04258 product CDS Acetylornithine deacetylase:5449729 reverse MW:42075 4546570 4545416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04259 product CDS Glycine/D-amino acid oxidases (deaminating):5450880 reverse MW:42049 4547976 4546567 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04260 product CDS Opine oxidase subunit A:5452286 reverse MW:49983 4548266 4547955 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04261 product CDS: hypothetical protein 5452265:5452576 reverse MW:11446 4550104 4548263 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04262 product CDS ATPase components of various ABC-type transport systems, contain duplicated ATPase:5454414 reverse MW:66148 4550984 4550106 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04263 product CDS peptide ABC transporter, permease protein:5455294 reverse MW:31176 4551937 4550981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04264 product CDS Peptide ABC transporter, permease protein:5456247 reverse MW:33693 4553606 4551969 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04265 product CDS ABC-type dipeptide transport system, periplasmic component:5457916 reverse MW:59323 4554993 4553698 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04266 product CDS FAD dependent oxidoreductase:5459282 reverse MW:45881 4555707 4555039 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04267 product CDS Haloacid dehalogenase, type II:5460017 reverse MW:25266 4556068 4555817 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04268 product hypothetical protein 4556241 4557098 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04269 product CDS Histone acetyltransferase HPA2:5461408 forward MW:30834 4557259 4557972 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04270 product CDS Predicted enzyme of the cupin superfamily:5462282 forward MW:25370 4558421 4558870 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04271 product hypothetical protein 4558421 4558495 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4558999 4559706 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04272 product CDS: hypothetical protein 6100122:6100418 reverse MW:11101 4560308 4559805 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04273 product CDS Histone acetyltransferase HPA2:6100023 forward MW:18533 4560873 4561682 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04274 product hypothetical protein 4561679 4562446 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04275 product hypothetical protein 4562713 4562486 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04276 product CDS Phosphoenolpyruvate carboxykinase [ATP]:6097342 forward MW:7858 4563112 4563819 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04277 product CDS: hypothetical protein 6100122:6100418 reverse MW:11101 4563820 4564530 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04278 product CDS: hypothetical protein 4548267:4548977 reverse MW:26489 4564537 4564758 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04279 product hypothetical protein 4564921 4565373 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04280 product hypothetical protein 4566025 4565675 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04281 product CDS StbE replicon stabilization toxin:4547122 forward MW:13110 4566289 4566038 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04282 product CDS StbD replicon stabilization protein (antitoxin to StbE):4546759 forward MW:9474 4568131 4566587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04283 product CDS Phosphoenolpyruvate carboxykinase [ATP]:4546210 forward MW:55809 4569212 4568310 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04284 product CDS 33 kDa chaperonin (Heat shock protein 33) (HSP33):4544487 forward MW:33178 4569780 4569373 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04285 note CDS Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 4543017:4543424 forward MW:15455 product hypothetical protein 4569948 4570730 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04286 product CDS EAL domain protein:4542861 reverse MW:29640 4570747 4571223 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04287 product CDS hypothetical protein sometimes fused to ribosomal protein S6 glutaminyl transferase:4542050 reverse MW:17507 4571220 4572125 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04288 product CDS Ribosomal protein S6 glutaminyl transferase:4541577 reverse MW:32679 4572578 4573909 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04289 product CDS Proton/glutamate symport protein @ Proton/aspartate symport protein:4540219 reverse MW:47686 4574003 4574278 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04290 product CDS: hypothetical protein 4538519:4538794 reverse MW:10264 4574495 4574743 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04291 product CDS DNA-binding protein inhibitor Id-2-related protein:4538302 reverse MW:8647 4574926 4577772 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04292 product CDS Adenylate cyclase:4537871 reverse MW:108340 4578314 4577907 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04293 product CDS Regulator of nucleoside diphosphate kinase:4534890 forward MW:14550 4578448 4578344 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04294 product rnk_pseudo 4579023 4578691 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04295 product CDS Frataxin CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly:4534106 forward MW:12414 4579230 4579376 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04296 product CDS Lipoprotein LppL-related protein:4533567 reverse MW:5135 4579230 4579292 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 4579386 4580633 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04297 product CDS Diaminopimelate decarboxylase:4533411 reverse MW:45267 4580638 4581468 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04298 product CDS Diaminopimelate epimerase:4532159 reverse MW:30280 4581482 4582216 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04299 note CDS Protein of unknown function DUF484 4530581:4531315 reverse MW:27029 product hypothetical protein 4582246 4583118 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04300 product CDS Tyrosine recombinase XerC:4530578 reverse MW:33771 4583111 4583803 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04301 product CDS 2-haloalkanoic acid dehalogenase:4529686 reverse MW:25511 4584210 4583878 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04302 product CDS: hypothetical protein 4528587:4528919 forward MW:11652 4584761 4584309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04303 note CDS Uncharacterized conserved protein 4528036:4528488 forward MW:16702 product hypothetical protein 4586314 4584977 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04304 product CDS Ammonium transporter:4527820 forward MW:45962 4586314 4586243 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 4586688 4586350 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04305 product CDS Nitrogen regulatory protein P-II:4526447 forward MW:12330 4587108 4587389 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04306 product CDS: hypothetical protein 4525408:4525689 reverse MW:10171 4587728 4587423 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04307 product CDS virulence-associated protein, putative:4525374 forward MW:11158 4589158 4588265 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04308 product CDS Transcriptional activator protein LysR:4524532 forward MW:34194 4589355 4590638 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04309 product CDS L-lysine 6-monooxygenase:4523442 reverse MW:47679 4590638 4591513 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04310 product CDS Permease of the drug/metabolite transporter (DMT) superfamily:4522159 reverse MW:31333 4591515 4592753 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04311 product CDS Diaminopimelate decarboxylase:4521282 reverse MW:45356 4592941 4593564 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04312 product CDS: hypothetical protein 4519233:4519856 reverse MW:22417 4592941 4593021 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 4593892 4593581 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04313 product CDS hypothetical protein:4519216 forward MW:9731 4593925 4595418 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04314 product CDS MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein:4518872 reverse MW:53041 4595536 4596399 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04315 product CDS putative type III effector HolPtoY:4517261 reverse MW:31116 4597899 4596592 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04316 product CDS Uncharacterized transporter, similarity to citrate transporter:4516205 forward MW:46422 4598199 4598597 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04317 product CDS Gfa-like protein:4514604 reverse MW:14900 4600221 4598824 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04318 product CDS HD-GYP domain (HD superfamily hydrolase):4513973 forward MW:51321 4602383 4600308 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04319 product CDS ATP-dependent DNA helicase RecG:4512489 forward MW:76184 4601309 4601547 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04320 product Ysr141 4603318 4602395 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04321 product CDS Hydrogen peroxide-inducible genes activator:4510402 forward MW:33593 4604157 4603411 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04322 product CDS Ferric siderophore transport system, periplasmic binding protein TonB:4509386 forward MW:26826 4604579 4604154 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04323 product CDS Biopolymer transport protein ExbD/TolR:4508643 forward MW:15309 4605539 4604583 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04324 product CDS MotA/TolQ/ExbB proton channel family protein:4508214 forward MW:26222 4605539 4605423 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 39 product putative signal peptide 4605750 4606598 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04325 product CDS Nucleoside-diphosphate-sugar epimerases:4507047 reverse MW:30556 4607384 4606647 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04326 product CDS lipoprotein, putative:4506150 forward MW:26372 4607384 4607322 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 4607819 4607439 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04327 product CDS Putative translation initiation inhibitor, yjgF family:4505358 forward MW:13373 4609950 4607845 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04328 product CDS GTP pyrophosphokinase , (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase(EC 3.1.7.2):4504952 forward MW:76351 4610274 4610011 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04329 product CDS DNA-directed RNA polymerase omega subunit:4502786 forward MW:9710 4611066 4610422 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04330 product CDS Guanylate kinase:4502375 forward MW:24318 4611943 4611080 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04331 product CDS Protein YicC:4501717 forward MW:31870 4612264 4612986 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04332 product CDS Ribonuclease PH:4500533 reverse MW:25693 4613006 4613374 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04333 product CDS: hypothetical protein 4499423:4499791 reverse MW:13695 4614223 4613444 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04334 product CDS Exodeoxyribonuclease III:4499353 forward MW:29825 4614306 4614947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04335 product CDS Orotate phosphoribosyltransferase:4498491 reverse MW:23170 4614958 4615590 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04336 product CDS: hypothetical protein 4497207:4497788 reverse MW:20983 4616747 4615842 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04337 product CDS Acetylglutamate kinase:4496955 forward MW:31935 4619361 4616776 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04338 product CDS Phosphomannomutase / Phosphoglucomutase (EC 5.4.2.2):4496021 forward MW:92037 4619871 4619416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04339 product CDS Deoxyuridine 5'-triphosphate nucleotidohydrolase:4493381 forward MW:16084 4621125 4619878 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04340 product CDS Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5):4492919 forward MW:43104 4621222 4621896 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04341 product CDS DNA repair protein RadC:4491575 reverse MW:24917 4623537 4621951 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04342 product CDS Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2):4490846 forward MW:58078 4623537 4623472 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4623901 4624134 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04343 product CDS LSU ribosomal protein L28p:4488860 reverse MW:7691 4624146 4624301 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04344 product CDS LSU ribosomal protein L33p:4488651 reverse MW:5974 4624774 4624409 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04345 product CDS: hypothetical protein 4488023:4488388 forward MW:13575 4625013 4626506 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04346 product CDS Aldehyde dehydrogenase:4487784 reverse MW:52729 4626820 4626569 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04347 product CDS: hypothetical protein 4485977:4486228 forward MW:8708 4626933 4627337 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04348 product CDS Major facilitator family transporter:4485864 reverse MW:14080 4627307 4628068 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04349 product CDS Major facilitator family transporter:4485490 reverse MW:26542 4629501 4628065 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04350 product CDS Cardiolipin synthetase:4484732 forward MW:55704 4629548 4629688 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04351 product CDS: hypothetical protein 4483109:4483249 reverse MW:5328 4631139 4629718 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04352 product CDS Transcriptional regulator, GntR family domain / Aspartate aminotransferase:4483079 forward MW:52579 4631315 4631566 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04353 product CDS: hypothetical protein 4481231:4481371 reverse MW:5649 4632885 4631572 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04354 product CDS FAD dependent oxidoreductase:4481225 forward MW:47439 4632937 4633344 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04355 product CDS: hypothetical protein 4479453:4479806 reverse MW:13184 4633847 4633359 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04356 product CDS Transcriptional regulator, AsnC family:4479438 forward MW:18641 4634004 4635305 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04357 product CDS D-amino acid dehydrogenase small subunit:4478793 reverse MW:46981 4635277 4635630 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04358 product CDS Endoribonuclease L-PSP:4477520 reverse MW:12885 4635710 4636783 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04359 product CDS Alanine racemase:4477087 reverse MW:38825 4636859 4637458 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04360 product CDS DNA-binding protein:4475887 reverse MW:19832 4637483 4637806 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04361 product CDS Cytochrome c5:4475314 reverse MW:11033 4637483 4637554 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 4637903 4639834 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04362 product CDS Acetyl-CoA hydrolase:4474894 reverse MW:71460 4640731 4639913 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04363 product CDS membrane protein, putative:4472884 forward MW:27721 4641977 4640724 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04364 product CDS: FAD-dependent pyridine nucleotide-disulphide oxidoreductase 4470820:4472073 forward MW:45162 4642889 4642005 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04365 product CDS Zn-dependent hydrolases, including glyoxylases:4470792 forward MW:32621 4643153 4644472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04366 product CDS sigma-54 dependent transcriptional regulator:4469644 reverse MW:48626 4644934 4649184 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04367 product CDS Rhs family protein:5902609 reverse MW:36240 4649194 4649451 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04368 product hypothetical protein 4650069 4650416 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04369 product hypothetical protein 4652000 4651431 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04370 product CDS Xanthine phosphoribosyltransferase:5606542 forward MW:20070 4654064 4652055 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04371 product CDS ATP-dependent DNA helicase Rep:5605918 forward MW:75294 4654270 4655934 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04372 product CDS GGDEF domain/EAL domain protein:5603703 reverse MW:62001 4657331 4655949 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04373 product CDS Na+-driven multidrug efflux pump:5602024 forward MW:48872 4657488 4658408 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04374 product CDS Transcriptional regulator, LysR family:5600485 reverse MW:34691 4658592 4660568 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04375 product CDS Methyl-accepting chemotaxis protein:5599381 reverse MW:70089 4660862 4662514 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04376 product CDS Na/Pi cotransporter family protein:5597138 reverse MW:60572 4662572 4663951 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04377 product CDS Metalloprotease, insulinase family:5595401 reverse MW:51560 4662572 4662628 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 4664048 4665217 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04378 product CDS membrane protein, putative:5593925 reverse MW:43067 4666463 4665222 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04379 product CDS Fused spore maturation proteins A and B:5592751 forward MW:43744 4668521 4667127 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04380 product CDS Argininosuccinate lyase:5590846 forward MW:51816 4668656 4669738 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04381 product CDS Autolysin sensor kinase:5589317 reverse MW:39982 4669735 4670481 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04382 product CDS Autolysis response regulater LytR:5588238 reverse MW:27834 4670704 4671645 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04383 product CDS Porphobilinogen deaminase:5587269 reverse MW:33465 4671642 4672418 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04384 product CDS Uroporphyrinogen-III synthase:5586331 reverse MW:27921 4672469 4673590 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04385 product CDS Homolog of E. coli HemX protein:5585504 reverse MW:40935 4673587 4674831 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04386 product CDS Homolog of E. coli HemY protein:5584386 reverse MW:46723 4675046 4675573 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04387 product CDS Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation:5582927 reverse MW:19057 4675046 4675144 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 33 product putative signal peptide 4675748 4676221 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04388 product CDS Regulator of sigma D:5582225 reverse MW:17735 4676980 4676306 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04389 product CDS Macrophage infectivity potentiator:5581667 forward MW:24243 4676980 4676924 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 4677197 4678153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04390 product CDS alginate regulatory protein AlgR3:5580776 reverse MW:31545 4678638 4678150 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04391 product CDS: hypothetical protein 5579335:5579823 forward MW:17862 4678640 4680595 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04392 product CDS Glutathione-regulated potassium-efflux system ATP-binding protein:5579333 reverse MW:72565 4680612 4681205 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04393 product CDS Small-conductance mechanosensitive channel:5577361 reverse MW:21371 4681272 4681904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04394 product CDS Homoserine/homoserine lactone efflux protein:5576701 reverse MW:22572 4682085 4683983 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04395 product CDS Cytochrome c family protein:5575888 reverse MW:67233 4682085 4682162 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 4685237 4684164 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04396 product CDS Transposase:6131950 forward MW:39389 4685380 4685610 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04397 product CDS: hypothetical protein 1998374:1998604 forward MW:9102 4686002 4685715 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04398 product CDS: hypothetical protein 1998709:1998996 reverse MW:10340 4688116 4685999 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04399 product CDS Oligopeptidase A:2001044 reverse MW:75472 4688163 4688708 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04400 product CDS carbonic anhydrase, family 3:2001702 forward MW:19468 4688736 4688921 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04401 product hypothetical protein 4689904 4688849 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04402 product CDS PUTATIVE ZINC PROTEASE PROTEIN:2002898 reverse MW:40206 4690085 4690516 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04403 product CDS: hypothetical protein 2003079:2003510 forward MW:15198 4690693 4692429 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04404 product CDS Oligopeptide transporter, OPT family:2005423 forward MW:60626 4692743 4693420 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04405 product CDS hypothetical protein:2006414 forward MW:6256 4693544 4693873 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04406 product CDS lipoprotein, putative:2006867 forward MW:16184 4694107 4693874 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04407 product CDS: hypothetical protein 2006868:2007101 reverse MW:8437 4694107 4694048 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 4694656 4694225 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04408 product CDS Osmotically inducible protein C:2007650 reverse MW:14821 4694867 4695868 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04409 product CDS Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-dependent oxidoreductases:2008862 forward MW:36562 4695963 4695865 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04410 product hypothetical protein 4696247 4696023 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04411 product CDS: hypothetical protein 2009017:2009241 reverse MW:7643 4696247 4696188 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 4696612 4696397 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04412 product CDS: hypothetical protein 2009391:2009606 reverse MW:7816 4696780 4697106 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04413 product CDS: hypothetical protein 2009774:2010100 forward MW:11797 4698063 4697107 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04414 product CDS trpBA operon transcriptional activator:2011057 reverse MW:34765 4698143 4699372 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04415 product CDS Tryptophan synthase beta chain:2012366 forward MW:44547 4699369 4700181 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04416 product CDS Tryptophan synthase alpha chain:2013175 forward MW:28459 4700308 4700811 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04417 product CDS CigR (Putative inner membrane protein):2013805 forward MW:18056 4700308 4700382 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4701821 4700997 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04418 product CDS Alpha/beta hydrolase fold:2014815 reverse MW:29854 4702366 4702034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04419 product CDS Aromatic ring-cleaving dioxygenase:2015360 reverse MW:12351 4702775 4703131 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04420 product hypothetical protein 4704090 4703140 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04421 product CDS Transcriptional regulator, LysR family:2017084 reverse MW:35271 4704205 4705710 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04422 product CDS Choline-sulfatase:2018704 forward MW:56776 4705747 4706673 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04423 product CDS L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1):2019667 forward MW:33309 4705747 4705815 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4706837 4707154 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04424 note CDS Methylmalonyl-CoA mutase, N-terminal domain/subunit 2019831:2020148 forward MW:11007 product hypothetical protein 4706837 4706902 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4707226 4708794 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04425 product CDS Sulfate permease:2021788 forward MW:56612 4709722 4708898 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04426 product CDS Shikimate 5-dehydrogenase I alpha:2022716 reverse MW:29181 4710636 4709722 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04427 product CDS Coproporphyrinogen III oxidase, aerobic:2023630 reverse MW:34501 4710806 4711783 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04428 product CDS Quinone oxidoreductase:2024777 forward MW:34317 4712348 4711791 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04429 product CDS YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA:2025342 reverse MW:20536 4713502 4712387 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04430 product CDS Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake:2026496 reverse MW:38956 4714651 4713626 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04431 product CDS Uncharacterized protein with LysM domain, 2026620:2027645 reverse MW:37631 4714651 4714592 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 4714777 4715283 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04432 product CDS Peptide deformylase:2028277 forward MW:19185 4715344 4716288 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04433 product CDS Methionyl-tRNA formyltransferase:2029282 forward MW:34552 4716285 4717631 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04434 product CDS Ribosomal RNA small subunit methyltransferase B:2030625 forward MW:48466 4717628 4719001 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04435 product CDS Trk system potassium uptake protein TrkA:2031995 forward MW:49682 4719144 4721498 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04436 product CDS Putative formate dehydrogenase oxidoreductase protein:2034492 forward MW:86476 4722468 4721581 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04437 product CDS Lipid A biosynthesis lauroyl acyltransferase:2035438 reverse MW:31781 4723057 4722506 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04438 product CDS DNA-3-methyladenine glycosylase:2035985 reverse MW:18190 4723077 4724084 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04439 product CDS Glycyl-tRNA synthetase alpha chain:2037078 forward MW:35970 4724081 4726135 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04440 product CDS Glycyl-tRNA synthetase beta chain:2039129 forward MW:74796 4726149 4726700 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04441 product CDS D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase ; Histidinol-phosphatase (EC 3.1.3.15):2039694 forward MW:19492 4726758 4727528 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04442 product CDS 1-acyl-sn-glycerol-3-phosphate acyltransferase:2040522 forward MW:28672 4728348 4727698 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04443 product CDS putative Transcriptional regulatory protein, AraC/XylS family:2041264 reverse MW:21858 4728442 4729767 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04444 product CDS: hypothetical protein 2041361:2042761 forward MW:51868 4732407 4729990 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04445 product CDS DNA gyrase subunit B:2045323 reverse MW:87280 4733515 4732412 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04446 product CDS DNA recombination and repair protein RecF:2046509 reverse MW:41584 4734641 4733538 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04447 product CDS DNA polymerase III beta subunit:2047635 reverse MW:40724 4736215 4734680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04448 product CDS Chromosomal replication initiator protein DnaA:2049203 reverse MW:56907 4736799 4736933 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04449 product CDS LSU ribosomal protein L34p:2049927 forward MW:5124 4736980 4737351 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04450 product CDS Ribonuclease P protein component:2050345 forward MW:13908 4737344 4737589 CDS gene yidD inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P0A8C8 locus_tag NYT1canu_04451 product Putative membrane protein insertion efficiency factor 4737592 4739280 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04452 product CDS Inner membrane protein translocase component YidC, long form:2052274 forward MW:61839 4739359 4740729 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04453 product CDS GTPase and tRNA-U34 5-formylation enzyme TrmE:2053723 forward MW:48743 4741309 4743201 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04454 product CDS tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA:2056195 forward MW:69207 4743198 4743842 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04455 product CDS rRNA small subunit methyltransferase, glucose inhibited division protein GidB:2056836 forward MW:23534 4743861 4744652 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04456 product CDS Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj:2057646 forward MW:28793 4744662 4745534 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04457 product CDS Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J:2058528 forward MW:32017 4745681 4746088 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04458 product CDS ATP synthase protein I:2059082 forward MW:14928 4746105 4746974 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04459 product CDS ATP synthase A chain:2059968 forward MW:31791 4747113 4747370 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04460 product CDS ATP synthase C chain:2060364 forward MW:8608 4747428 4747898 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04461 product CDS ATP synthase B chain:2060892 forward MW:16939 4747911 4748447 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04462 product CDS ATP synthase delta chain:2061441 forward MW:19341 4748469 4750013 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04463 product CDS ATP synthase alpha chain:2063007 forward MW:55324 4750064 4750924 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04464 product CDS ATP synthase gamma chain:2063918 forward MW:31378 4750952 4752331 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04465 product CDS ATP synthase beta chain:2065325 forward MW:49492 4752376 4752801 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04466 product CDS ATP synthase epsilon chain:2065795 forward MW:14761 4753020 4754294 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04467 product CDS N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157):2067288 forward MW:47062 4754631 4755398 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04468 product CDS Transcriptional regulator of glmS gene, DeoR family:2068392 forward MW:28154 4755408 4757243 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04469 product CDS Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]:2070237 forward MW:66399 4758252 4757542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04470 product CDS ABC transporter, ATP-binding protein:2070904 reverse MW:13527 4758281 4759066 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04471 product hypothetical protein 4759292 4759474 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04472 product hypothetical protein 4759591 4759719 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04473 product hypothetical protein 4760891 4759683 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04474 product CDS Transposase:6127383 reverse MW:45840 4761174 4760893 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04475 product hypothetical protein 4762293 4761880 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04476 product CDS lactoylglutathione lyase:2073521 reverse MW:15358 4763419 4762460 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04477 product CDS Methylase of polypeptide chain release factors:2074647 reverse MW:34979 4764867 4763416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04478 product CDS: hypothetical protein 2074644:2076140 reverse MW:56014 4765438 4765292 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04479 product CDS hypothetical protein:2076666 reverse MW:5495 4765742 4765545 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04480 product CDS: hypothetical protein 2076773:2076970 reverse MW:7146 4766711 4765830 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04481 product CDS Mn-containing catalase:2077939 reverse MW:31564 4767136 4767360 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04482 product CDS: hypothetical protein 2078364:2078588 forward MW:8512 4767789 4769819 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04483 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):2081047 forward MW:72774 4769996 4771918 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04484 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):2083146 forward MW:67425 4772569 4774323 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04485 product CDS ABC-type anion transport system, duplicated permease component:2085689 forward MW:64154 4774355 4775659 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04486 product CDS ABC transporter, ATP-binding protein:2087025 forward MW:48229 4775709 4776776 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04487 product CDS Sensor histidine kinase:2088142 forward MW:36213 4776776 4777414 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04488 product CDS DNA-binding response regulator, LuxR family:2088780 forward MW:23325 4779442 4777556 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04489 product CDS O-antigen acetylase:2090808 reverse MW:69742 4780809 4779502 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04490 product CDS: hypothetical protein 2090868:2092175 reverse MW:49067 4780809 4780720 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 4782112 4780811 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04491 product CDS membrane protein, putative:2093478 reverse MW:47174 4784329 4782710 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04492 product CDS Glucans biosynthesis protein D precursor:2095695 reverse MW:60575 4784329 4784264 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4785660 4784731 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04493 product CDS Phosphatidate cytidylyltransferase:2097026 reverse MW:34308 4786280 4785660 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04494 product CDS 1-acyl-sn-glycerol-3-phosphate acyltransferase:2097646 reverse MW:23017 4786744 4786289 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04495 product CDS: hypothetical protein 2097655:2098089 reverse MW:16031 4788123 4786768 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04496 product CDS Ser/Thr and Tyr protein phosphatase (dual specificity):2099489 reverse MW:51019 4789877 4788120 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04497 product CDS Putative lipase in cluster with Phosphatidate cytidylyltransferase:2101243 reverse MW:65625 4790527 4789910 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04498 product CDS CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase:2101893 reverse MW:22277 4790870 4792816 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04499 product CDS Membrane protease subunits, stomatin/prohibitin homologs:2104182 forward MW:69156 4792828 4793865 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04500 note CDS HflC protein paralog among fluorescent psuedomonads 2104194:2105231 forward MW:37512 product hypothetical protein 4793862 4794932 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04501 product CDS Membrane protease subunits, stomatin/prohibitin homologs:2106298 forward MW:38221 4794929 4796854 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04502 product CDS Probable cadmium-transporting ATPase:2108220 forward MW:66841 4797184 4797747 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04503 product hypothetical protein 4799201 4797762 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04504 product CDS Cardiolipin synthetase:2110167 reverse MW:53550 4799374 4799895 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04505 product CDS: hypothetical protein 2110340:2110861 forward MW:18972 4799374 4799433 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 4800094 4801317 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04506 product CDS N-acetylmuramoyl-L-alanine amidase:2112283 forward MW:43432 4801721 4801323 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04507 product CDS Glutamine synthetase adenylyltransferase:2112687 reverse MW:14121 4801721 4801647 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4801863 4803074 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04508 product CDS Putative metal chaperone, involved in Zn homeostasis, GTPase of family 2112829:2114040 forward MW:45350 4803074 4803724 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04509 product CDS: hypothetical protein 2114040:2114690 forward MW:23941 4804102 4803731 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04510 product CDS NADH:ubiquinone oxidoreductase 49 kD subunit 7:2115068 reverse MW:13594 4804102 4804028 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4804155 4805126 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04511 product CDS Putative metal chaperone, involved in Zn homeostasis, GTPase of family 2115121:2116092 forward MW:34938 4805567 4805175 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04512 product CDS: hypothetical protein 2116141:2116533 reverse MW:14978 4805686 4806552 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04513 product CDS Pyridoxal kinase:2117518 forward MW:31032 4807084 4806599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04514 product CDS cytosolic long-chain acyl-CoA thioester hydrolase family protein:2118023 reverse MW:17238 4807377 4809140 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04515 product CDS Sodium/hydrogen exchanger family protein:2120106 forward MW:65266 4809587 4809180 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04516 product CDS: hypothetical protein 2120146:2120553 reverse MW:15593 4810560 4809718 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04517 product CDS putative membrane protein:2121526 reverse MW:30297 4810560 4810489 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 4812968 4810785 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04518 product CDS ATP-dependent DNA helicase UvrD/PcrA:2123934 reverse MW:81534 4813289 4814155 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04519 product CDS Phosphogluconate repressor HexR, RpiR family:2125121 forward MW:30991 4814263 4814484 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04520 product CDS: hypothetical protein 2125229:2125450 forward MW:8600 4815388 4814438 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04521 product CDS LysR family transcriptional regulator 2125404:2126354 reverse MW:35861 4815603 4817018 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04522 product CDS Pyruvate carboxyl transferase subunit A:2127984 forward MW:51875 4817121 4818929 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04523 product CDS Pyruvate carboxyl transferase subunit B:2129895 forward MW:65569 4820005 4819337 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04524 product CDS Acetyltransferase, GNAT family:2130971 reverse MW:25423 4820467 4820021 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04525 product CDS acetyltransferase, GNAT family:2131433 reverse MW:16896 4821102 4820464 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04526 product CDS Transcriptional regulator:2132068 reverse MW:23579 4821193 4822755 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04527 product CDS Transcriptional regulator, GntR family domain / Aspartate aminotransferase:2133721 forward MW:56968 4822810 4824021 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04528 product CDS: hypothetical protein 2133776:2134987 forward MW:42115 4824169 4825041 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04529 product CDS probable membrane protein 2135120:2136007 forward MW:33339 4826109 4825105 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04530 product CDS L-asparaginase:2137075 reverse MW:35241 4827590 4826139 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04531 product CDS sodium/alanine transporter:2138439 reverse MW:47562 4829297 4827873 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04532 product CDS Aspartate ammonia-lyase:2140263 reverse MW:51205 4829592 4830503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04533 product CDS Transcriptional regulator:2141469 forward MW:33289 4831171 4830539 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04534 product CDS: hypothetical protein 2141505:2142137 reverse MW:23953 4831171 4831100 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 4832059 4831427 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04535 product CDS: hypothetical protein 2142393:2143025 reverse MW:23317 4832392 4832883 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04536 product CDS Phosphoribosylaminoimidazole carboxylase catalytic subunit:2143849 forward MW:16880 4832893 4833975 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04537 product CDS Phosphoribosylaminoimidazole carboxylase ATPase subunit:2144941 forward MW:38689 4834263 4834508 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04538 product CDS: hypothetical protein 2145229:2145474 forward MW:8250 4834592 4835125 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04539 product CDS lipoprotein, putative:2146091 forward MW:19385 4834592 4834648 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 4836062 4835151 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04540 product CDS Aldose 1-epimerase:2147028 reverse MW:33716 4836554 4836153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04541 product CDS cytosolic long-chain acyl-CoA thioester hydrolase family protein:2147520 reverse MW:14479 4836985 4838274 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04542 product CDS major facilitator family transporter:2149240 forward MW:46133 4838444 4839442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04543 product CDS Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1):2150408 forward MW:34998 4838444 4838518 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 4839571 4841856 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04544 product CDS Phosphate transport system permease protein PstC (TC 3.A.1.7.1):2152822 forward MW:84009 4841868 4843541 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04545 product CDS Phosphate transport system permease protein PstA (TC 3.A.1.7.1):2154507 forward MW:60741 4843608 4844441 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04546 product CDS Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1):2155407 forward MW:31191 4844512 4845273 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04547 product CDS Phosphate transport system regulatory protein PhoU:2156239 forward MW:28798 4845476 4846369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04548 product CDS response regulator:2157335 forward MW:32272 4846593 4849034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04549 product CDS Permeases of the major facilitator superfamily:2160000 forward MW:88822 4849140 4851245 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04550 product CDS Permeases of the major facilitator superfamily:2162211 forward MW:80328 4851406 4852308 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04551 product CDS peptidase, M23/M37 family:2163274 forward MW:32290 4851406 4851468 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 4853736 4852396 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04552 product CDS Hemolysins containing CBS domains:2164702 reverse MW:50061 4855122 4853836 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04553 product CDS Phosphate regulon sensor protein PhoR (SphS):2166124 reverse MW:49852 4855908 4855219 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04554 product CDS Phosphate regulon transcriptional regulatory protein PhoB (SphR):2166874 reverse MW:25599 4856967 4856077 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04555 product CDS 4-hydroxybenzoate polyprenyltransferase:2167933 reverse MW:32938 4857527 4856967 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04556 product CDS Chorismate--pyruvate lyase:2168493 reverse MW:20786 4857715 4857882 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04557 product CDS Rubredoxin:2168848 forward MW:6178 4857931 4859079 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04558 product CDS Rubredoxin-NAD(+) reductase:2170045 forward MW:40169 4859268 4859543 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04559 product CDS DNA-binding protein HU-alpha:2170509 forward MW:9806 4859793 4860236 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04560 product CDS: hypothetical protein 2170774:2171202 forward MW:14269 4859793 4859861 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4860409 4860786 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04561 product CDS Superfamily II DNA and RNA helicases:2171752 forward MW:14218 4862748 4860787 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04562 product CDS: hypothetical protein 2171753:2173714 reverse MW:73302 4862748 4862680 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4863068 4862745 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04563 product CDS: hypothetical protein 2173711:2174034 reverse MW:11128 4863068 4863000 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 4863412 4863107 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04564 product CDS Holliday junction resolvasome, helicase subunit:2174378 reverse MW:10594 4863412 4863341 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 4863817 4863500 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04565 product CDS Outer membrane receptor proteins, mostly Fe transport:2174783 reverse MW:10773 4863817 4863752 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4864348 4864133 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04566 product CDS: hypothetical protein 2175099:2175314 reverse MW:8268 4866162 4864669 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04567 product CDS Acetyl-CoA hydrolase:2177128 reverse MW:54011 4867796 4866342 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04568 product CDS NAD(P) transhydrogenase subunit beta:2178762 reverse MW:50424 4868116 4867793 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04569 product CDS NAD(P) transhydrogenase alpha subunit:2179082 reverse MW:11406 4869248 4868127 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04570 product CDS NAD(P) transhydrogenase alpha subunit:2180214 reverse MW:38925 4870593 4869673 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04571 product CDS transcriptional regulator, LysR family:2181559 reverse MW:34382 4870749 4871930 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04572 product CDS Glutaryl-CoA dehydrogenase:2182896 forward MW:43169 4871943 4873163 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04573 product CDS L-carnitine dehydratase/bile acid-inducible protein F:2184129 forward MW:43077 4873753 4875286 rRNA locus_tag NYT1canu_04574 product 16S ribosomal RNA score 0 4875384 4875460 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_04575 product tRNA-Ile(gat) 4875505 4875580 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_04576 product tRNA-Ala(tgc) 4875826 4878715 rRNA locus_tag NYT1canu_04577 product 23S ribosomal RNA score 0 4878877 4878986 rRNA locus_tag NYT1canu_04578 product 5S ribosomal RNA score 2.4e-13 4879100 4879209 rRNA locus_tag NYT1canu_04579 product 5S ribosomal RNA score 2.7e-13 4879865 4879389 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04580 product CDS: hypothetical protein 5885633:5886109 reverse MW:16949 4883345 4879899 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04581 product CDS Non-ribosomal peptide synthetase modules:5889589 reverse MW:127252 4884289 4883342 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04582 product CDS: hypothetical protein 5889586:5890533 reverse MW:35906 4885108 4884332 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04583 product CDS PROBABLE REMNANT OF A TRANSPOSASE GENE PROTEIN:5891352 reverse MW:29157 4886651 4885914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04584 product CDS Predicted regulator PutR for proline utilization, GntR family:5892895 reverse MW:27430 4887978 4886971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04585 product CDS Oxidoreductase, aldo/keto reductase family:5894222 reverse MW:37093 4888688 4887999 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04586 product CDS HAD-superfamily hydrolase:5894932 reverse MW:25174 4888843 4890324 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04587 product CDS GTP-binding protein:5896568 forward MW:53201 4890583 4890915 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04588 product CDS: hypothetical protein 5896827:5897159 forward MW:12230 4891098 4891568 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04589 product CDS Cell division inhibitor:5897812 forward MW:17566 4891561 4894005 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04590 product CDS Phosphoenolpyruvate synthase / Pyruvate phosphate dikinase:5900249 forward MW:90689 4894515 4894087 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04591 product CDS probable membrane protein 5900331:5900759 reverse MW:15932 4894748 4894859 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04592 product rsmX 4895443 4894892 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04593 product CDS: hypothetical protein 5901136:5901687 reverse MW:21189 4896365 4895436 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04594 product CDS Rhs family protein:5902609 reverse MW:36240 4896378 4896890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04595 product CDS: hypothetical protein 6091714:6093267 reverse MW:54261 4897417 4896977 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04596 product hypothetical protein 4897852 4897421 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04597 product hypothetical protein 4898123 4897860 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04598 product hypothetical protein 4898691 4898392 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04599 product CDS Rhs family protein:5904935 reverse MW:10983 4899231 4898905 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04600 product hypothetical protein 4903431 4899241 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04601 product CDS Rhs family protein:5902609 reverse MW:36240 4903899 4903435 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04602 product CDS putative cytoplasmic protein:4549777 reverse MW:17297 4904512 4903931 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04603 product CDS: hypothetical protein 4549809:4550390 reverse MW:21407 4906373 4904514 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04604 product CDS VgrG protein:4552251 reverse MW:69485 4907030 4908388 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04605 product CDS: hypothetical protein 4552908:4554266 forward MW:48594 4908385 4908663 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04606 product hypothetical protein 4909214 4909525 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04607 product hypothetical protein 4909715 4909978 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04608 product hypothetical protein 4910063 4911172 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04609 product CDS ADP-ribosylglycohydrolase family protein:4557050 forward MW:40462 4911248 4911802 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04610 product CDS: hypothetical protein 4557126:4557680 forward MW:20028 4911806 4912153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04611 product CDS hypothetical protein:4558031 forward MW:9881 4912391 4912191 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04612 product CDS: hypothetical protein 4558069:4558269 reverse MW:7879 4913324 4913163 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04613 product hypothetical protein 4913936 4913511 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04614 product CDS putative membrane protein:4559814 reverse MW:16292 4915210 4914113 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04615 product CDS Uncharacterized protein ImpA:4561088 reverse MW:40028 4915822 4915304 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04616 product CDS Uncharacterized protein ImpD:4561700 reverse MW:18271 4918469 4915977 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04617 product CDS OmpA domain protein:4564347 reverse MW:94206 4919389 4918466 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04618 note CDS Uncharacterized protein conserved in bacteria 4564344:4565267 reverse MW:34731 product hypothetical protein 4923341 4919421 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04619 product CDS putative membrane protein:4569219 reverse MW:144163 4924085 4923372 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04620 note CDS Uncharacterized protein conserved in bacteria 4569250:4569963 reverse MW:26784 product hypothetical protein 4925425 4924082 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04621 product CDS Uncharacterized protein ImpJ/VasE:4571303 reverse MW:50519 4926177 4925422 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04622 product CDS Probable lipoprotein:4572055 reverse MW:27550 4926177 4926079 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 33 product putative signal peptide 4928805 4926202 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04623 product CDS ClpB protein:4574683 reverse MW:95112 4929749 4928802 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04624 product CDS Uncharacterized protein ImpH/VasB:4575627 reverse MW:36142 4931668 4929836 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04625 product CDS Protein ImpG/VasA:4577546 reverse MW:69763 4932150 4931668 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04626 product CDS Uncharacterized protein ImpF:4578028 reverse MW:18117 4933680 4932178 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04627 product CDS Uncharacterized protein ImpC:4579558 reverse MW:56093 4934228 4933695 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04628 product CDS Uncharacterized protein ImpB:4580106 reverse MW:20095 4935047 4934298 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04629 product CDS: hypothetical protein 4580176:4580925 reverse MW:28603 4935200 4935337 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04630 product hypothetical protein 4935755 4937404 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04631 product CDS Zn-dependent protease with chaperone function:4583282 forward MW:59697 4937398 4937919 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04632 product CDS Zn-dependent protease with chaperone function:4583797 forward MW:19396 4938075 4937962 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04633 product rsmX 4938367 4938254 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04634 product rsmX 4939351 4938539 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04635 product CDS: hypothetical protein 4584417:4585121 reverse MW:25719 4939532 4941460 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04636 product CDS ATP-dependent DNA helicase, RecQ family:4587337 forward MW:72539 4941983 4941519 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04637 product CDS: hypothetical protein 4587396:4587860 reverse MW:15048 4941886 4942252 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04638 product P34 4941983 4941921 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 4944528 4942192 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04639 product CDS Putative formate dehydrogenase oxidoreductase protein:4590405 reverse MW:85930 4945361 4944525 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04640 product CDS Formate dehydrogenase chain D:4591238 reverse MW:29870 4946345 4945464 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04641 product CDS transcriptional regulator, LysR family:4592222 reverse MW:32634 4946497 4946937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04642 product CDS: hypothetical protein 4592374:4592814 forward MW:15865 4947641 4946979 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04643 product CDS: putative hydrolase 4592856:4593518 reverse MW:25417 4947740 4948306 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04644 product CDS ADP compounds hydrolase NudE:4594183 forward MW:20845 4948303 4949145 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04645 product CDS 3'(2'),5'-bisphosphate nucleotidase:4595022 forward MW:30057 4950005 4949529 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04646 product CDS Histone acetyltransferase HPA2:4595882 reverse MW:18022 4951377 4949992 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04647 product CDS C4-dicarboxylate transport transcriptional regulatory protein:4597254 reverse MW:50454 4953188 4951374 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04648 product CDS Signal transduction histidine kinase regulating C4-dicarboxylate transport system:4599065 reverse MW:67207 4953898 4953353 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04649 product CDS dTDP-4-dehydrorhamnose 3,5-epimerase:4599775 reverse MW:20436 4955133 4953979 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04650 product CDS dTDP-glucose 4,6-dehydratase:4600977 reverse MW:41962 4955272 4958184 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04651 product CDS aminotransferase, class III:4604061 forward MW:106136 4958493 4959371 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04652 product CDS N-carbamoylputrescine amidase (3.5.1.53):4605248 forward MW:32798 4959377 4960483 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04653 product CDS Agmatine deiminase:4606359 forward MW:22926 4960703 4960909 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04654 product CDS: hypothetical protein 4606579:4606785 forward MW:7783 4961139 4962413 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04655 product CDS Outer membrane porin, OprD family:4608289 forward MW:46322 4961139 4961204 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 4962983 4962453 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04656 product CDS: hypothetical protein 4608329:4608859 reverse MW:20132 4963397 4963780 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04657 product CDS Acetyltransferase, GNAT family:4609656 forward MW:17151 4963956 4964195 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04658 product CDS RelB protein (antitoxin to RelE):4610071 forward MW:8955 4964185 4964475 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04659 product CDS RelE antibacterial toxin protein:4610351 forward MW:8682 4965439 4964702 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04660 product CDS: hypothetical protein 4610578:4611315 reverse MW:25875 4965794 4966135 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04661 product CDS: hypothetical protein 4611670:4612011 forward MW:12961 4966213 4966827 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04662 product CDS phosphoglycerate mutase family protein:4612703 forward MW:22631 4967513 4966884 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04663 product CDS FMN-dependent NADH-azoreductase:4613389 reverse MW:22901 4969667 4967928 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04664 product CDS Urea carboxylase without Allophanate hydrolase 2 domains:4615543 reverse MW:61813 4971283 4969664 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04665 product CDS Allophanate hydrolase 2 subunit 1 / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54):4617159 reverse MW:56955 4972099 4971293 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04666 product CDS hypothetical protein possibly connected to lactam utilization and allophanate hydrolase:4617975 reverse MW:28925 4972866 4972096 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04667 product CDS Lactam utilization protein LamB:4618742 reverse MW:27033 4974133 4972901 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04668 product CDS: hypothetical protein 4618777:4619946 reverse MW:40479 4974390 4975055 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04669 product CDS Transcriptional regulator, GntR family:4620931 forward MW:22297 4976663 4975602 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04670 product CDS hypothetical protein:4622539 reverse MW:40557 4978587 4976734 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04671 product CDS: hypothetical protein 4622610:4624463 reverse MW:70872 4979054 4978584 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04672 product hypothetical protein 4980259 4979051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04673 product CDS hypothetical protein:4626135 reverse MW:47033 4981276 4981143 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04674 product radC 4981933 4982181 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04675 product hypothetical protein 4983136 4982327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04676 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 4984155 4983133 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04677 product CDS ISPsy4, transposase:6120546 reverse MW:37529 4984534 4984382 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04678 product hypothetical protein 4985748 4984663 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04679 product CDS phage integrase, putative:4380206 reverse MW:47588 4986652 4987146 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04680 product hypothetical protein 4987536 4987279 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04681 product hypothetical protein 4988690 4987542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04682 product CDS prophage PSPPH06, site-specific recombinase, phage integrase family:5818910 reverse MW:43804 4988893 4988687 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04683 product hypothetical protein 4989159 4988890 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04684 product hypothetical protein 4989516 4989226 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04685 product CDS hypothetical protein:5819736 reverse MW:10180 4989808 4989566 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04686 product CDS transcriptional regulator PrtN, putative:5820028 reverse MW:8919 4990179 4989805 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04687 product hypothetical protein 4990451 4990176 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04688 product CDS hypothetical protein:5820671 reverse MW:10112 4991034 4990462 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04689 product CDS deoxynucleotide monophosphate kinase, putative:5821254 reverse MW:20933 4991595 4991302 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04690 product CDS: hypothetical protein 4316356:4316607 forward MW:9341 4992453 4991737 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04691 product CDS Transcriptional regulator:2970830 reverse MW:27500 4992554 4992781 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04692 product CDS hypothetical protein:4383541 reverse MW:8799 4993006 4993494 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04693 product CDS hypothetical protein:5823713 forward MW:17344 4993487 4993693 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04694 product hypothetical protein 4993690 4996383 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04695 product CDS hypothetical protein:5826602 forward MW:90458 4996712 4997209 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04696 product CDS hypothetical protein:5827428 forward MW:17927 4997454 4997768 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04697 product CDS holin:5827987 forward MW:11777 4997765 4998151 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04698 note CDS Conserved domain protein 5827984:5828370 forward MW:13792 product hypothetical protein 4998456 4998977 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04699 product CDS Phage DNA packaging protein, Nu1 subunit of terminase:5829196 forward MW:19489 4999021 5000910 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04700 product CDS Phage terminase, large subunit:5831129 forward MW:70382 5000921 5001136 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04701 product CDS: hypothetical protein 5831140:5831355 forward MW:8278 5001139 5002740 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04702 product CDS Portal protein:5832959 forward MW:58668 5002743 5003975 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04703 product CDS Periplasmic serine proteases (ClpP class):5834194 forward MW:42261 5003989 5004339 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04704 product CDS hypothetical protein:5834558 forward MW:9724 5004352 5005380 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04705 product CDS: hypothetical protein 5834571:5835599 forward MW:37838 5005382 5005603 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04706 product CDS: hypothetical protein 5835601:5835822 forward MW:7619 5005606 5005920 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04707 product CDS: hypothetical protein 5835825:5836139 forward MW:11338 5005917 5006573 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04708 product CDS: hypothetical protein 5836136:5836792 forward MW:24459 5006566 5007093 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04709 product CDS: hypothetical protein 5836785:5837312 forward MW:19446 5007093 5007656 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04710 product CDS Baseplate assembly protein V:5837875 forward MW:19518 5007699 5007977 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04711 product CDS: hypothetical protein 5837918:5838196 forward MW:9696 5007981 5008307 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04712 product CDS Baseplate assembly protein W:5838526 forward MW:12050 5008304 5009185 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04713 product CDS Baseplate assembly protein J:5839404 forward MW:31873 5009187 5009792 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04714 product hypothetical protein 5009789 5011858 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04715 product CDS Phage tail fiber protein:6109208 reverse MW:73195 5011867 5012409 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04716 product CDS tail fiber assembly domain protein:6107130 reverse MW:20009 5012503 5013666 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04717 product CDS Phage tail sheath monomer:6089533 reverse MW:37109 5013679 5014188 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04718 product CDS Major tail tube protein:6088495 reverse MW:18454 5014205 5014507 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04719 product CDS: hypothetical protein 6087667:6087969 reverse MW:10972 5014646 5017384 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04720 product CDS tail tape meausure protein:6133883 forward MW:13974 5017394 5018239 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04721 product CDS Phage protein U:6135365 reverse MW:20743 5018214 5018420 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04722 product CDS P2-like prophage tail protein X:6136148 forward MW:7469 5018512 5019555 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04723 product CDS: Phage tail protein D 5420984:5421463 reverse MW:17612 5019594 5020142 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04724 product CDS: Lytic enzyme 5049960:5050508 reverse MW:20101 5020341 5021135 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04725 product CDS Site-specific DNA methylase:5049761 reverse MW:30608 5021229 5021873 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04726 product CDS: hypothetical protein 5048229:5048447 reverse MW:8425 5021879 5022157 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04727 product CDS hypothetical protein:4154032 reverse MW:9885 5022716 5022222 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04728 product CDS Uncharacterized protein ImpD:5417341 forward MW:17724 5024487 5022865 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04729 product CDS Type I restriction-modification system, DNA-methyltransferase subunit M:5047237 forward MW:61168 5025683 5024484 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04730 product CDS Anticodon nuclease:5045618 forward MW:45233 5026954 5025680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04731 product CDS Type I restriction-modification system, specificity subunit S:5044422 forward MW:48148 5029952 5026944 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04732 product CDS Type I restriction-modification system, restriction subunit R:5043158 forward MW:115074 5030623 5030548 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_04733 product tRNA-Thr(tgt) 5030728 5030970 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04734 product CDS: hypothetical protein 5039132:5039326 reverse MW:6231 5030728 5030823 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 5031383 5032396 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04735 product CDS DnaJ domain protein:5038719 reverse MW:36375 5032793 5032878 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04736 product C4 5032924 5033238 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04737 product CDS: hypothetical protein 5036864:5037178 reverse MW:11600 5034751 5033534 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04738 product CDS SAM-dependent methyltransferases:5036568 forward MW:47357 5035496 5034807 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04739 product CDS Amino acid ABC transporter, permease protein:5035295 forward MW:25532 5036188 5035493 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04740 product CDS Arginine ABC transporter, permease protein ArtQ:5034609 forward MW:23082 5037019 5036255 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04741 product CDS Amino acid ABC transporter, periplasmic amino acid-binding protein:5033847 forward MW:28234 5037019 5036948 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 5037807 5037034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04742 product CDS amino acid ABC transporter, ATP-binding protein:5033068 forward MW:28376 5038332 5039723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04743 product CDS transport permease protein of gamma-aminobutyrate:5031770 reverse MW:49522 5040256 5039771 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04744 product CDS: hypothetical protein 5029846:5030331 forward MW:18185 5041321 5040380 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04745 product CDS type III effector HopPsyA(Pto):5029722 forward MW:34508 5041522 5041358 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04746 product CDS type III effector HopPsyA(Pto):5028744 forward MW:6069 5041950 5041567 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04747 product CDS type III chaperone protein ShcA:5028535 forward MW:14339 5043471 5042125 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04748 product CDS Methyl-accepting chemotaxis protein:5027977 forward MW:48933 5044061 5043783 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04749 product CDS lipoprotein, putative:5026319 forward MW:9835 5044061 5044005 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 5044591 5044217 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04750 product CDS hypothetical protein:5025885 forward MW:8850 5044815 5044588 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04751 product CDS: hypothetical protein 5025287:5025514 forward MW:7986 5045100 5045025 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_04752 product tRNA-Phe(gaa) 5045474 5045202 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04753 product CDS: Probable Fe(2+)-trafficking protein YggX 5024628:5024900 forward MW:10621 5046538 5045471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04754 product CDS A/G-specific adenine glycosylase:5024631 forward MW:39951 5048849 5046624 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04755 product CDS A/G-specific adenine glycosylase:5023478 forward MW:80075 5049351 5051012 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04756 product CDS Oxalate/formate antiporter:5020751 reverse MW:58779 5051250 5052449 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04757 product CDS Biosynthetic Aromatic amino acid aminotransferase alpha @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57):5018853 reverse MW:43527 5052542 5053135 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04758 product CDS Imidazoleglycerol-phosphate dehydratase:5017561 reverse MW:21930 5053135 5053773 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04759 product CDS Imidazole glycerol phosphate synthase amidotransferase subunit:5016968 reverse MW:23575 5053760 5054038 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04760 product CDS: hypothetical protein 5016065:5016325 reverse MW:10116 5054144 5054881 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04761 product CDS Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase:5015959 reverse MW:25876 5054901 5055671 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04762 product CDS Imidazole glycerol phosphate synthase cyclase subunit:5015202 reverse MW:27070 5055858 5056613 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04763 product CDS ABC-type amino acid transport, signal transduction systems, periplasmic component/domain:5014245 reverse MW:28170 5055858 5055926 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 5058150 5056618 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04764 product CDS Trypsin domain protein:5013485 forward MW:54458 5058150 5058046 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 35 product putative signal peptide 5060159 5058333 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04765 product CDS: hypothetical protein 5009878:5011770 forward MW:68685 5061194 5060412 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04766 product CDS Possible divergent polysaccharide deacetylase:5009691 forward MW:28367 5061194 5061135 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 5062535 5061198 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04767 product CDS Carboxyl-terminal protease:5008905 forward MW:46827 5062535 5062458 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 5063891 5062569 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04768 product CDS Peptidase M23B precursor:5007534 forward MW:49062 5063891 5063832 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 5065576 5064044 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04769 product CDS 2,3-bisphosphoglycerate-independent phosphoglycerate mutase:5006059 forward MW:55575 5065733 5066146 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04770 product CDS: Rhodanese-related sulfurtransferase 5003957:5004370 reverse MW:14740 5066143 5066400 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04771 product CDS Glutaredoxin 3 (Grx3):5003960 reverse MW:9400 5066441 5066935 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04772 product CDS Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state):5003662 reverse MW:18178 5067459 5067004 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04773 product CDS tRNA (cytosine34-2'-O-)-methyltransferase:5003099 forward MW:16851 5067485 5067898 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04774 product CDS: hypothetical protein 5002205:5002558 reverse MW:13164 5069102 5068245 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04775 product CDS Taurine transport system permease protein tauC BUT NOT:5001858 forward MW:30600 5069884 5069099 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04776 product CDS Taurine transport ATP-binding protein tauB BUT NOT:5001004 forward MW:28223 5070890 5069913 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04777 product CDS Taurine-binding periplasmic protein TauA:5000190 forward MW:34486 5070890 5070816 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5071647 5072993 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04778 product CDS Outer membrane porin, OprD family:4998456 reverse MW:48482 5071647 5071712 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5073163 5073801 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04779 product CDS Alkyl hydroperoxide reductase subunit C-like protein:4996940 reverse MW:23964 5074253 5075218 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04780 product CDS Alkanesulfonates-binding protein:4995850 reverse MW:34614 5074253 5074339 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 5075247 5076044 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04781 product CDS Alkanesulfonates transport system permease protein:4994856 reverse MW:28437 5076041 5076853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04782 product CDS Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB:4994062 reverse MW:29418 5076879 5077094 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04783 product CDS Organosulfonate utilization protein SsuF:4993224 reverse MW:7628 5077229 5078371 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04784 product CDS YD repeat protein:4992874 reverse MW:41494 5079007 5078375 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04785 product CDS Transcriptional regulator, TetR family:4991728 forward MW:23383 5081013 5079637 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04786 product CDS glutamine synthetase family protein:5841490 reverse MW:51035 5081285 5081106 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04787 product P1 5081609 5082967 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04788 product CDS glutamine synthetase family protein:5843444 forward MW:51110 5083037 5084404 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04789 product CDS Omega-amino acid--pyruvate aminotransferase:5844881 forward MW:50190 5084535 5085632 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04790 product CDS Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2):5846109 forward MW:39641 5084535 5084606 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 5085804 5086898 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04791 product CDS Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2):5847375 forward MW:39763 5085804 5085878 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5086954 5088096 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04792 product CDS Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2):5848573 forward MW:42478 5088093 5089013 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04793 product CDS Putrescine transport system permease protein PotH (TC 3.A.1.11.2):5849490 forward MW:34191 5089010 5089891 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04794 product CDS Putrescine transport system permease protein PotI (TC 3.A.1.11.2):5850368 forward MW:32085 5092577 5090190 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04795 product CDS Protein related to penicillin acylase:5853054 reverse MW:88015 5092851 5093792 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04796 product CDS Lysophospholipase:5854269 forward MW:34723 5093980 5093789 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04797 product CDS: hypothetical protein 5854266:5854457 reverse MW:6887 5094789 5094031 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04798 product CDS: hypothetical protein 5854508:5855266 reverse MW:27345 5094789 5094733 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 5094931 5095566 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04799 product CDS oxidoreductase, 2OG-Fe(II) oxygenase family:5856043 forward MW:24115 5095704 5096141 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04800 product CDS ATPases of the AAA+ class:5856618 forward MW:15288 5095704 5095775 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 5097543 5096314 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04801 product CDS D-3-phosphoglycerate dehydrogenase:5858020 reverse MW:44305 5097680 5099098 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04802 product CDS D-2-hydroxyglutarate dehydrogenase:5859575 forward MW:51280 5099166 5099831 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04803 product CDS Fumarylacetoacetate hydrolase family protein:5860308 forward MW:23607 5100015 5100947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04804 product CDS Outer membrane protein:5861424 forward MW:34988 5101058 5101963 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04805 product CDS Outer membrane protein:5862440 forward MW:33386 5102680 5102009 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04806 product CDS Ribose 5-phosphate isomerase A:5863157 reverse MW:23252 5102858 5104372 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04807 product CDS Threonine dehydratase biosynthetic:6137357 forward MW:32232 5105029 5105457 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04808 product CDS Predicted integral membrane protein:5282136 forward MW:15524 5106127 5105471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04809 product CDS Phosphoserine phosphatase:5282806 reverse MW:24792 5106270 5106749 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04810 product CDS Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase:5283428 forward MW:18839 5106771 5109050 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04811 product CDS: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated 5283450:5285729 forward MW:83320 5109114 5109269 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04812 product hypothetical protein 5109414 5110226 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04813 product CDS Prolipoprotein diacylglyceryl transferase:5286905 forward MW:30143 5110279 5111250 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04814 product CDS Thymidylate synthase:5287929 forward MW:36752 5111327 5111524 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04815 product CDS: hypothetical protein 5288006:5288203 forward MW:7296 5111528 5112424 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04816 product CDS: hypothetical protein 5288207:5289103 forward MW:32964 5112892 5112446 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04817 product CDS Cd(II)/Pb(II)-responsive transcriptional regulator:5289571 reverse MW:16729 5112978 5115236 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04818 product CDS Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.5); Copper-translocating P-type ATPase(EC 3.6.3.4):5291699 forward MW:72608 5116187 5115387 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04819 product CDS N-formylglutamate deformylase:5292865 reverse MW:29990 5117406 5116201 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04820 product CDS Imidazolonepropionase:5294084 reverse MW:43156 5118798 5117422 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04821 product CDS Histidine transport protein (permease):5295476 reverse MW:49372 5120448 5118901 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04822 product CDS Histidine ammonia-lyase:5297126 reverse MW:54617 5122044 5120503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04823 product CDS Histidine ammonia-lyase:5298722 reverse MW:54664 5122887 5122057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04824 product CDS Histidine ABC transporter, ATP-binding protein (TC 3.A.1):5299565 reverse MW:30688 5123735 5122884 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04825 product CDS Histidine ABC transporter, permease protein (TC 3.A.1):5300413 reverse MW:30851 5124777 5123809 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04826 product CDS Histidine ABC transporter, histidine-binding protein (TC 3.A.1):5301455 reverse MW:35125 5124777 5124700 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 5126587 5124890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04827 product CDS Urocanate hydratase:5303286 reverse MW:62591 5127199 5129193 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04828 product CDS High-affinity choline uptake protein BetT:5305871 forward MW:71896 5130312 5129377 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04829 product CDS Zinc ABC transporter, periplasmic-binding protein ZnuA:5306990 reverse MW:33685 5130380 5130862 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04830 product CDS Zinc uptake regulation protein ZUR:5307540 forward MW:15398 5130862 5131656 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04831 product CDS Zinc ABC transporter, ATP-binding protein ZnuC:5308334 forward MW:28645 5131649 5132437 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04832 product CDS Zinc ABC transporter, inner membrane permease protein ZnuB:5309115 forward MW:27445 5132476 5133192 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04833 product CDS lipoprotein, putative:5309870 forward MW:25919 5132476 5132550 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5135543 5133393 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04834 product CDS Catalase:5312221 reverse MW:78747 5135758 5136858 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04835 product CDS Methionine ABC transporter ATP-binding protein:5313536 forward MW:36810 5136858 5137532 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04836 product CDS Methionine ABC transporter permease protein:5314210 forward MW:24214 5137585 5138358 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04837 product CDS Methionine ABC transporter substrate-binding protein:5315036 forward MW:27792 5137585 5137641 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 5139129 5138497 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04838 product CDS Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone:5315807 reverse MW:22728 5139681 5139193 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04839 product CDS Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1:5316359 reverse MW:18280 5139985 5140635 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04840 product CDS: hypothetical protein 5316663:5317313 forward MW:24097 5142276 5140744 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04841 product CDS Sulfate transporter family protein in cluster with carbonic anhydrase:5318954 reverse MW:53352 5143120 5142380 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04842 product CDS Carbonic anhydrase:5319798 reverse MW:26747 5144385 5143327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04843 product CDS Radical SAM domain protein:5321063 reverse MW:39110 5145166 5144498 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04844 product CDS Sigma cross-reacting protein 27A:5321844 reverse MW:23200 5146035 5145373 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04845 product CDS DedA family protein:5322698 reverse MW:24038 5146267 5147277 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04846 product CDS Porphobilinogen synthase:5323955 forward MW:36878 5147294 5149504 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04847 product CDS Polyphosphate kinase:5326182 forward MW:82693 5150993 5149491 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04848 product CDS Exopolyphosphatase:5327671 reverse MW:56249 5151502 5150996 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04849 product CDS: hypothetical protein 2083293:2083730 forward MW:16957 5152618 5151884 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04850 product CDS amino acid ABC transporter, ATP-binding protein:5704364 reverse MW:26721 5153252 5152605 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04851 product CDS Putative amino acid ABC transporter, permease protein:5704998 reverse MW:23509 5153917 5153252 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04852 product CDS amino acid ABC transporter, permease protein:5705663 reverse MW:24500 5154732 5153947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04853 product CDS ABC-type amino acid transport/signal transduction systems, periplasmic component/domain:5706478 reverse MW:28045 5154732 5154655 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 5154983 5155687 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04854 product CDS Transcriptional regulator, GntR family:5707433 forward MW:25293 5155809 5156138 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04855 product CDS Thioredoxin:5707884 forward MW:11718 5156214 5156313 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04856 product Pseudomon-Rho 5156370 5157629 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04857 product CDS Transcription termination factor Rho:5709375 forward MW:47030 5157758 5159224 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04858 product CDS 3-polyprenyl-4-hydroxybenzoate carboxy-lyase:5710970 forward MW:54593 5159224 5160192 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04859 product CDS 2-polyprenylphenol hydroxylase oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like:5711938 forward MW:35284 5160400 5161068 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04860 product CDS ChaC-related protein:5712814 forward MW:24943 5162418 5161069 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04861 product CDS Glycerol-3-phosphate transporter:5714164 reverse MW:50047 5162693 5163349 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04862 product CDS Periplasmic protein TonB, links inner and outer membranes:5715095 forward MW:24072 5162693 5162749 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 5163346 5163981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04863 product CDS Periplasmic protein TonB, links inner and outer membranes:5715727 forward MW:23926 5164840 5164079 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04864 product CDS: hypothetical protein 5715825:5716322 reverse MW:18716 5165159 5164890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04865 product CDS Colicin immunity protein:5716905 reverse MW:10132 5166802 5165156 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04866 product CDS pyocin/colicin protein, putative:5718548 reverse MW:59935 5167071 5166937 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04867 product hypothetical protein 5168633 5167647 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04868 product CDS Putative Zn-dependent oxidoreductase 5719393:5720379 reverse MW:34478 5168764 5169171 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04869 product CDS flagellar protein FliL, putative:5720917 forward MW:14795 5168764 5168817 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 18 product putative signal peptide 5169628 5169179 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04870 note CDS Protein of unknown function DUF55 5720925:5721374 reverse MW:16824 product hypothetical protein 5169822 5169974 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04871 product CDS: hypothetical protein 5721568:5721720 forward MW:5649 5170632 5170021 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04872 product CDS 5-formyltetrahydrofolate cyclo-ligase:5722378 reverse MW:23789 5170905 5170727 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_04873 product 6S 5171265 5170936 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04874 product CDS: hypothetical protein 5722682:5723011 reverse MW:11931 5171471 5171262 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04875 product CDS: hypothetical protein 5723008:5723217 reverse MW:8114 5171622 5172176 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04876 note CDS FIG001590: Putative conserved exported protein precursor 5723368:5723922 forward MW:19719 product hypothetical protein 5172252 5173586 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04877 product CDS Xaa-Pro aminopeptidase:5725332 forward MW:49582 5173583 5174770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04878 product CDS 2-octaprenyl-6-methoxyphenol hydroxylase:5726516 forward MW:43203 5174822 5176051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04879 product CDS 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase:5727797 forward MW:44897 5177147 5176155 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04880 product CDS Transcriptional regulator, AraC family:5728893 reverse MW:36685 5177752 5179062 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04881 product CDS Hexuronate transporter:5730808 forward MW:45834 5179278 5179859 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04882 product CDS: hypothetical protein 5731024:5731605 forward MW:21835 5179942 5180892 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04883 product CDS Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR:5732638 forward MW:34486 5181063 5181845 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04884 product CDS Methionine ABC transporter substrate-binding protein:5733591 forward MW:28044 5181063 5181128 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5183574 5182336 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04885 product CDS Secretory lipase precursor:3027715 reverse MW:43531 5183574 5183494 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 5184304 5183687 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04886 product CDS: hypothetical protein 3027828:3027965 reverse MW:5045 5185028 5184297 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04887 product hypothetical protein 5185685 5185041 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04888 product CDS: hypothetical protein 3029182:3029826 reverse MW:22997 5189146 5186048 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04889 product CDS Autotransporter:3033287 reverse MW:107311 5189146 5189066 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 5189364 5190260 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04890 product CDS Alpha-ketoglutarate-dependent taurine dioxygenase:3034401 forward MW:33553 5190277 5191137 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04891 product CDS Taurine transport ATP-binding protein TauB:3035278 forward MW:31912 5191229 5192095 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04892 product CDS Taurine transport system permease protein TauC:3036236 forward MW:31777 5192134 5193153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04893 product CDS Taurine-binding periplasmic protein TauA:3037294 forward MW:36935 5192134 5192226 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 5193442 5194209 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04894 product CDS YD repeat protein:3038350 forward MW:27050 5194320 5195354 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04895 product CDS YD repeat protein:3039495 forward MW:37024 5195621 5196739 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04896 product CDS Efflux transporter, RND family, MFP subunit:3040880 forward MW:39405 5195621 5195686 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5196736 5197806 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04897 product CDS Efflux membrane fusion protein, RND family:3041947 forward MW:38694 5197803 5200904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04898 product CDS RND efflux transporter:3045045 forward MW:113909 5201786 5201163 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04899 product CDS SAM-dependent methyltransferases:3045927 reverse MW:23499 5202482 5201838 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04900 product CDS Methionine ABC transporter permease protein:3046623 reverse MW:23095 5203602 5202472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04901 product CDS Methionine ABC transporter ATP-binding protein:3047743 reverse MW:41365 5204387 5203599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04902 product CDS Methionine ABC transporter substrate-binding protein:3048528 reverse MW:28614 5204387 5204328 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 5205857 5204499 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04903 product CDS Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-dependent oxidoreductases:3049998 reverse MW:50940 5207062 5205857 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04904 product CDS Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme:3051203 reverse MW:43153 5208410 5207088 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04905 product CDS Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme:3052401 reverse MW:42402 5209523 5208804 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04906 product CDS: hypothetical protein 3052945:3053664 reverse MW:26409 5210840 5210097 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04907 product CDS Cystine ABC transporter, ATP-binding protein:3054981 reverse MW:27278 5211512 5210844 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04908 product CDS Cystine ABC transporter, permease protein:3055653 reverse MW:24710 5212315 5211509 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04909 product CDS Cystine ABC transporter, periplasmic cystine-binding protein FliY:3056456 reverse MW:29022 5212315 5212226 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 5213534 5212536 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04910 product CDS D-cysteine desulfhydrase:3057674 reverse MW:35462 5213731 5214684 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04911 product CDS Serine acetyltransferase:3058824 forward MW:34239 5215405 5214698 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04912 product CDS Probable transmembrane protein:3059545 reverse MW:25664 5215968 5215402 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04913 product CDS DNA-directed RNA polymerase specialized sigma subunit, sigma24-like:3060069 reverse MW:19746 5215970 5216098 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04914 product hypothetical protein 5216607 5216074 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04915 product CDS: hypothetical protein 3060214:3060747 reverse MW:18491 5216607 5216530 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 5217887 5216712 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04916 product CDS Na+/H+ antiporter NhaA type:3062027 reverse MW:40940 5218534 5217914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04917 note CDS Conserved hypothetical protein (perhaps related to histidine degradation) 3062054:3062674 reverse MW:22276 product hypothetical protein 5219280 5218531 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04918 product CDS Histidine utilization repressor:3063381 reverse MW:26539 5219444 5220808 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04919 product CDS Formiminoglutamic iminohydrolase:3064948 forward MW:49954 5221567 5221025 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04920 product CDS Outer membrane lipoprotein Blc:3065743 reverse MW:21850 5221780 5221607 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04921 product CDS lipoprotein, putative:3066001 reverse MW:8874 5222880 5221777 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04922 product CDS ISPsy19, transposase:6133168 forward MW:41651 5223042 5222929 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04923 product CDS lipoprotein, putative:3066001 reverse MW:8874 5224308 5223298 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04924 product CDS Fructose-1,6-bisphosphatase, type I:3067267 reverse MW:37134 5225791 5224442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04925 product CDS Probable transmembrane protein:3068750 reverse MW:48334 5225791 5225735 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 5228636 5225817 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04926 product CDS: hypothetical protein 3068776:3071595 reverse MW:101349 5231409 5228959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04927 product CDS Glycogen phosphorylase:3074368 reverse MW:91986 5231689 5232660 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04928 product CDS Proline iminopeptidase:3075619 forward MW:36509 5232703 5233140 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04929 product CDS D-tyrosyl-tRNA(Tyr) deacylase:3076099 forward MW:15435 5233406 5235331 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04930 product CDS Glucans biosynthesis protein G precursor:3078290 forward MW:68218 5233406 5233519 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 38 product putative signal peptide 5235324 5237903 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04931 product CDS Glucans biosynthesis glucosyltransferase H:3080862 forward MW:96018 5240130 5238187 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04932 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):3083089 reverse MW:70525 5242249 5240333 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04933 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):3085208 reverse MW:68468 5243046 5242339 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04934 product CDS Ribosomal RNA small subunit methyltransferase E:3086005 reverse MW:26307 5243843 5243043 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04935 product CDS Twin-arginine translocation protein TatC:3086802 reverse MW:29874 5244301 5243840 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04936 product CDS Twin-arginine translocation protein TatB:3087260 reverse MW:16399 5244581 5244306 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04937 product CDS Twin-arginine translocation protein TatA:3087540 reverse MW:10083 5244958 5244626 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04938 product CDS Phosphoribosyl-ATP pyrophosphatase:3087917 reverse MW:11936 5245353 5244961 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04939 product CDS Phosphoribosyl-AMP cyclohydrolase:3088312 reverse MW:14908 5247040 5245421 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04940 product CDS Ubiquinone biosynthesis monooxygenase UbiB:3089999 reverse MW:62236 5247660 5247037 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04941 product CDS Protein YigP clustered with ubiquinone biosynthetic genes:3090619 reverse MW:22745 5248430 5247660 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04942 product CDS Ubiquinone/menaquinone biosynthesis methyltransferase UbiE:3091389 reverse MW:28409 5248575 5248853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04943 product CDS: hypothetical protein 3091534:3091812 forward MW:10158 5248957 5249403 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04944 product CDS polyhydroxyalkanoate granule-associated protein PhaI:3092362 forward MW:16363 5249441 5250214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04945 product CDS Polyhydroxyalkanoate granule-associated protein PhaF:3093173 forward MW:26584 5250354 5250100 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04946 product hypothetical protein 5251099 5250485 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04947 product CDS Transcriptional regulator PhaD:3094058 reverse MW:23277 5252838 5251147 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04948 product CDS Polyhydroxyalkanoic acid synthase:3095797 reverse MW:62977 5253846 5252989 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04949 product CDS Poly(3-hydroxyalkanoate) depolymerase:3096805 reverse MW:31721 5255579 5253900 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04950 product CDS Polyhydroxyalkanoic acid synthase:3098538 reverse MW:62594 5256256 5255885 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04951 note CDS COG3536: Uncharacterized protein conserved in bacteria 3098844:3099215 reverse MW:13825 product hypothetical protein 5257699 5256362 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04952 product CDS ATP-dependent hsl protease ATP-binding subunit HslU:3100658 reverse MW:49882 5258295 5257765 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04953 product CDS ATP-dependent protease HslV:3101254 reverse MW:18808 5259145 5258450 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04954 product CDS Cell division protein FtsN:3102104 reverse MW:24546 5260883 5259147 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04955 product CDS Arginyl-tRNA synthetase:3103842 reverse MW:63625 5263200 5260981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04956 product CDS Helicase PriA essential for oriC/DnaA-independent DNA replication:3106159 reverse MW:81845 5263369 5263596 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04957 product CDS LSU ribosomal protein L31p:3106555 forward MW:8153 5263667 5264410 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04958 product CDS Thermonuclease family protein:3107369 forward MW:28678 5264581 5265849 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04959 product CDS NADP-dependent malic enzyme:3108808 forward MW:45136 5268495 5266051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04960 product CDS Multimodular transpeptidase-transglycosylase (EC 3.4.-.-):3111454 reverse MW:89337 5268702 5269766 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04961 product CDS Type IV pilus biogenesis protein PilM:3112725 forward MW:38086 5269766 5270392 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04962 product CDS Type IV pilus biogenesis protein PilN:3113351 forward MW:22741 5270389 5271012 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04963 product CDS Type IV pilus biogenesis protein PilO:3113971 forward MW:23204 5271009 5271536 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04964 product CDS Type IV pilus biogenesis protein PilP:3114495 forward MW:18569 5271554 5273689 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04965 product CDS Type IV pilus biogenesis protein PilQ:3116648 forward MW:75626 5273721 5274212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04966 product CDS Shikimate kinase I:3117171 forward MW:18164 5274331 5275434 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04967 product CDS 3-dehydroquinate synthase:3118393 forward MW:39951 5275445 5277070 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04968 product CDS DamX, an inner membrane protein involved in bile resistance:3120029 forward MW:56075 5277430 5281875 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04969 product CDS Glutamate synthase [NADPH] large chain:3124834 forward MW:162377 5281998 5283416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04970 product CDS Glutamate synthase [NADPH] small chain:3126375 forward MW:51804 5283574 5285133 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04971 product CDS amidase family protein:3128092 forward MW:55163 5283574 5283639 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5285279 5288527 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04972 product CDS: hypothetical protein 3128238:3131486 forward MW:120189 5288658 5289722 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04973 product CDS Uroporphyrinogen III decarboxylase:3132681 forward MW:38711 5291264 5289750 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04974 product CDS N-acyl-D-amino-acid deacylase:3134223 reverse MW:54105 5292128 5291268 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04975 product CDS Transcriptional regulator, RpiR family:3135087 reverse MW:30883 5293478 5292129 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04976 product CDS Gluconate transporter family protein:3136437 reverse MW:47065 5293579 5293851 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_04977 product hypothetical protein 5293986 5293777 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04978 note CDS Conserved domain protein 3136736:3136945 reverse MW:7633 product hypothetical protein 5294245 5294093 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04979 note CDS Conserved domain protein 3137052:3137204 reverse MW:5940 product hypothetical protein 5294358 5294242 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04980 product CDS Putative ATP binding protein SugR:3137317 reverse MW:4276 5295511 5294327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04981 product CDS Putative ATP binding protein SugR:3137612 reverse MW:11850 5296845 5295589 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04982 product CDS Permeases of the major facilitator superfamily:3139804 reverse MW:44400 5296962 5297855 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04983 product CDS LysR family transcriptional regulator YnfL:3140814 forward MW:32497 5299119 5297893 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04984 product CDS: 3-oxoacyl-[ACP] synthase 3140852:3142078 reverse MW:43749 5299847 5299119 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04985 product CDS 3-oxoacyl-[ACP] reductase:3142806 reverse MW:25872 5300299 5299844 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04986 product CDS 3-hydroxydecanoyl-[ACP] dehydratase:3143258 reverse MW:16300 5301492 5300296 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04987 product CDS 3-oxoacyl-[ACP] synthase FabV like:3144451 reverse MW:41524 5301971 5301489 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04988 product CDS: Lipoprotein 3144448:3144930 reverse MW:18436 5301971 5301912 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 5302702 5301968 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04989 product CDS: SAM-dependent methyltransferases 3144927:3145646 reverse MW:27197 5303946 5302699 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04990 product CDS: FAD-binding protein 3145658:3146905 reverse MW:45884 5305105 5303933 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04991 product CDS: cation/hydrogen antiporter 3146892:3148064 reverse MW:42842 5307465 5305102 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04992 product CDS: membrane protein, exporter 3148061:3150424 reverse MW:84601 5308063 5307449 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04993 product CDS: Putative transmembrane protein 3150408:3151022 reverse MW:22817 5308063 5307995 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 5308485 5308060 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04994 product CDS: 4-hydroxybenzoyl-CoA thioesterase domain protein 3151019:3151444 reverse MW:16291 5310022 5308475 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04995 product CDS Putative histidine ammonia-lyase protein:3152981 reverse MW:56083 5310950 5310003 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04996 product CDS Lysophospholipid acyltransferase:3153909 reverse MW:36170 5311681 5310947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04997 product CDS: Glycosyl transferase 3153906:3154640 reverse MW:27648 5313365 5311674 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04998 product CDS: Acyl-CoA synthetase, AMP-(fatty) acid ligase / (3R)-hydroxymyristoyl-[ACP] dehydratase 3154633:3156315 reverse MW:61814 5313912 5313367 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_04999 product CDS: hypothetical protein 3156326:3156871 reverse MW:20136 5314163 5313909 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05000 product CDS Acyl carrier protein (ACP2):3157122 reverse MW:9666 5314433 5314173 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05001 product CDS Acyl carrier protein (ACP1):3157392 reverse MW:9272 5315220 5314408 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05002 product CDS: 1-acyl-sn-glycerol-3-phosphate acyltransferase 3157367:3158179 reverse MW:29992 5315942 5315196 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05003 product CDS 3-oxoacyl-[ACP] synthase:3158874 reverse MW:26683 5316221 5317000 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05004 product CDS Chromosome (plasmid) partitioning protein ParA:3159959 forward MW:29120 5317466 5317074 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05005 product CDS: hypothetical protein 3160033:3160425 reverse MW:13828 5317719 5319395 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05006 product CDS Malonate decarboxylase alpha subunit:3162354 forward MW:61393 5319395 5320282 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05007 product CDS Triphosphoribosyl-dephospho-CoA synthetase:3163241 forward MW:30841 5320284 5320583 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05008 product CDS Malonate decarboxylase delta subunit:3163542 forward MW:10680 5320576 5321427 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05009 product CDS Malonate decarboxylase beta subunit:3164386 forward MW:29978 5321424 5322224 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05010 product CDS Malonate decarboxylase gamma subunit:3165183 forward MW:28378 5322221 5322856 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05011 product CDS Phosphoribosyl-dephospho-CoA transferase:3165815 forward MW:22984 5322853 5323788 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05012 product CDS Malonyl CoA acyl carrier protein transacylase:3166747 forward MW:33002 5323858 5324283 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05013 product CDS Malonate transporter, MadL subunit:3167242 forward MW:14413 5324285 5325049 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05014 product CDS Malonate transporter, MadM subunit:3168008 forward MW:25979 5325986 5325060 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05015 product CDS Malonate utilization transcriptional regulator:3168945 reverse MW:34660 5326109 5326723 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05016 product CDS: Predicted membrane protein hemolysin III 3169068:3169682 forward MW:22541 5327342 5326860 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05017 product hypothetical protein 5327720 5327535 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05018 product hypothetical protein 5328146 5328631 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05019 product hypothetical protein 5329185 5329460 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05020 product CDS hypothetical protein:3172419 forward MW:9938 5329955 5330827 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05021 product CDS hypothetical protein:3173786 forward MW:37279 5330824 5331441 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05022 product CDS peptiodase; papain:3174400 forward MW:21435 5331438 5332277 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05023 product CDS hypothetical protein:3175236 forward MW:23721 5332926 5332249 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05024 product hypothetical protein 5333519 5332926 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05025 product hypothetical protein 5334489 5333680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05026 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 5335508 5334486 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05027 product CDS ISPsy4, transposase:6120546 reverse MW:37529 5336120 5335563 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05028 product hypothetical protein 5336614 5336814 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05029 product hypothetical protein 5336858 5338291 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05030 product CDS Putative ATP-binding protein:5761657 reverse MW:54354 5338278 5338907 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05031 product hypothetical protein 5340412 5339252 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05032 product CDS hypothetical protein:5759263 forward MW:43941 5341289 5340753 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05033 product CDS Deoxycytidine deaminase-like protein:5757762 forward MW:14135 5341999 5341286 CDS EC_number 3.5.4.13 gene dcd_1 inference ab initio prediction:Prodigal:2.6 inference protein motif:HAMAP:MF_00146 locus_tag NYT1canu_05034 product Deoxycytidine triphosphate deaminase 5342533 5342000 CDS EC_number 3.5.4.13 gene dcd_2 inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:Q9KFV3 locus_tag NYT1canu_05035 product dCTP deaminase 5344052 5343333 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05036 product CDS Ribosomal RNA small subunit methyltransferase E:5755182 forward MW:26435 5345575 5344169 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05037 product CDS Adenosylmethionine-8-amino-7-oxononanoate aminotransferase:5754346 forward MW:52627 5345786 5347663 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05038 product CDS Monoamine oxidase:5752729 reverse MW:66859 5345786 5345857 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 5347999 5348547 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05039 product CDS Cytochrome B561:5750516 reverse MW:20137 5348575 5349153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05040 product CDS Protein yceI precursor:5749940 reverse MW:20632 5348575 5348646 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 5351297 5349408 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05041 product CDS ATP-dependent RNA helicase RhlE:5749107 forward MW:68091 5352453 5351608 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05042 product CDS 5,10-methylenetetrahydrofolate reductase:5746907 forward MW:31430 5354052 5352643 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05043 product CDS Adenosylhomocysteinase:5745872 forward MW:51349 5354185 5354076 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05044 product SAH_riboswitch 5354406 5354801 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05045 product CDS cytosolic long-chain acyl-CoA thioester hydrolase family protein:5744109 reverse MW:14938 5355855 5355070 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05046 product CDS Hydroxypyruvate isomerase:5743445 forward MW:29086 5357335 5355878 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05047 product CDS Putative transport protein:5742637 forward MW:50266 5358109 5357471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05048 product CDS Ribulose-5-phosphate 4-epimerase and aldolases:5741044 forward MW:23193 5359398 5358109 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05049 product CDS Predicted pyridoxine biosynthesis protein (probably from glycolaldehide):5740406 forward MW:44398 5360314 5359409 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05050 product CDS D-beta-hydroxybutyrate dehydrogenase:5739106 forward MW:31081 5361011 5360556 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05051 product CDS: hypothetical protein 5737504:5737959 forward MW:17165 5362391 5361183 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05052 product CDS Uncharacterized PLP-dependent aminotransferase YfdZ:5737332 forward MW:44790 5362730 5364577 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05053 product CDS Dihydroxy-acid dehydratase:5735785 reverse MW:65995 5364919 5367477 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05054 product CDS VgrG protein:6111889 forward MW:93616 5367477 5369501 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05055 product CDS: Putative transmembrane protein 5328199:5330148 forward MW:72236 5369498 5371162 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05056 product CDS: hypothetical protein 5330784:5331809 forward MW:37859 5371247 5371582 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05057 product CDS: hypothetical protein 4098327:4098641 forward MW:10905 5372093 5371770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05058 product CDS Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific:5332740 reverse MW:11450 5373317 5372103 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05059 product CDS Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB:5333964 reverse MW:45008 5373907 5373314 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05060 product CDS Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific):5334554 reverse MW:21108 5374561 5373941 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05061 product CDS Methionine biosynthesis protein MetW:5335208 reverse MW:23489 5375708 5374569 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05062 product CDS Homoserine O-acetyltransferase:5336355 reverse MW:41749 5376591 5376001 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05063 product CDS Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock):5337238 reverse MW:21633 5377435 5376617 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05064 product CDS Pyrroline-5-carboxylate reductase:5338082 reverse MW:28059 5378174 5377488 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05065 product CDS Hypothetical protein YggS, proline synthase co-transcribed bacterial PROSC:5338821 reverse MW:24452 5378230 5379264 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05066 product CDS Twitching motility protein PilT:5339911 forward MW:37976 5380058 5379381 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05067 product CDS NLP/P60 family protein:5340663 reverse MW:23054 5380058 5379993 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5380309 5380713 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05068 product CDS: hypothetical protein 5340956:5341360 forward MW:15486 5382171 5380900 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05069 product CDS Dihydroorotase:5342818 reverse MW:43990 5383172 5382168 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05070 product CDS Aspartate carbamoyltransferase:5343819 reverse MW:36382 5383697 5383185 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05071 product CDS Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR:5344344 reverse MW:18456 5384483 5384043 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05072 product CDS Putative Holliday junction resolvase:5345027 reverse MW:15947 5385055 5384483 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05073 note CDS UPF0301 protein YqgE 5345027:5345599 reverse MW:20522 product hypothetical protein 5386033 5385131 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05074 product CDS TonB protein:5346568 reverse MW:32884 5387242 5386283 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05075 product CDS Glutathione synthetase:5347762 reverse MW:34481 5387487 5387897 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05076 product CDS twitching motility protein PilG:5348441 forward MW:14943 5387944 5388309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05077 product CDS twitching motility protein PilH:5348853 forward MW:13325 5388324 5388863 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05078 product CDS type IV pili signal transduction protein PilI:5349407 forward MW:20468 5388896 5390938 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05079 product CDS type IV pilus biogenesis protein PilJ:5351482 forward MW:73142 5390986 5396949 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05080 product CDS Sensor histidine kinase/response regulator:5357493 forward MW:218732 5396942 5397412 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05081 product CDS Chemotaxis signal transduction protein:5357956 forward MW:16738 5399084 5397621 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05082 product CDS Selenoprotein O and cysteine-containing homologs:5359628 reverse MW:55134 5399888 5399214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05083 product CDS Transcriptional regulator, GntR family:5360432 reverse MW:24764 5400268 5400579 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05084 product hypothetical protein 5400844 5401131 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05085 product CDS: hypothetical protein 5361409:5361675 forward MW:9951 5404587 5401198 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05086 product CDS Potassium efflux system KefA protein / Small-conductance mechanosensitive channel:5365131 reverse MW:125562 5404587 5404513 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5406368 5404626 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05087 product CDS Na(+)/H(+) antiporter:5366912 reverse MW:61374 5406619 5409747 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05088 product CDS Mannosyltransferase OCH1:5370291 forward MW:117022 5409884 5412505 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05089 note CDS Conserved domain protein 5370401:5373049 forward MW:98294 product hypothetical protein 5414330 5412528 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05090 product CDS Acyl-CoA dehydrogenase:5374874 reverse MW:66307 5415129 5414533 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05091 product CDS Transposase:6130746 forward MW:30021 5415884 5415369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05092 product CDS ISPsy8, transposase OrfA:6129910 forward MW:19998 5419976 5416023 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05093 product CDS Transcriptional repressor of PutA and PutP / Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12):1388003 reverse MW:142780 5420427 5421914 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05094 product CDS Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter:1389941 forward MW:52770 5422682 5422011 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05095 product CDS lyase, putative:1390709 reverse MW:25203 5422997 5425135 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05096 product CDS Sensory box/GGDEF family protein:1393162 forward MW:79234 5425168 5425692 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05097 product CDS: Predicted metal-dependent hydrolase 1393195:1393719 forward MW:20001 5425749 5426045 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05098 product CDS: hypothetical protein 1393776:1394072 forward MW:11041 5426568 5426110 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05099 product CDS Acetyltransferase:1394595 reverse MW:17411 5426794 5427549 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05100 product CDS ABC-type amino acid transport/signal transduction systems, periplasmic component/domain:1395576 forward MW:28243 5426794 5426859 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5429710 5427512 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05101 product CDS: hypothetical protein 1395539:1397701 reverse MW:79870 5431072 5429846 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05102 product CDS: hypothetical protein 1397873:1399051 reverse MW:42704 5432580 5431201 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05103 product CDS ATP-dependent RNA helicase DbpA:1400565 reverse MW:48415 5434589 5432943 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05104 product CDS Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex:1402616 reverse MW:56375 5437377 5434732 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05105 product CDS Pyruvate dehydrogenase E1 component:1405404 reverse MW:99265 5437762 5440719 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05106 product CDS Glutamate-ammonia-ligase adenylyltransferase:1408746 forward MW:110593 5440849 5441883 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05107 product CDS ADP-heptose--lipooligosaccharide heptosyltransferase II:1409910 forward MW:36672 5441886 5442950 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05108 product CDS Lipopolysaccharide heptosyltransferase I:1410977 forward MW:39301 5442950 5444071 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05109 product CDS UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG:1412098 forward MW:42143 5444071 5444877 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05110 product CDS Lipopolysaccharide core biosynthesis protein WaaP , heptosyl-I-kinase:1412904 forward MW:30639 5444877 5445611 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05111 product CDS Heptose kinase WapQ, eukaryotic type:1413638 forward MW:28593 5445608 5446369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05112 product CDS InaA protein:1414396 forward MW:28850 5446400 5447845 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05113 product CDS Serine/threonine protein kinase:1415872 forward MW:54121 5453986 5447861 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05114 product CDS Aconitase A:1422013 reverse MW:227266 5454289 5456046 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05115 product CDS Carbamoyltransferase in large core OS assembly cluster:1424073 forward MW:65489 5456030 5457160 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05116 product CDS Glycosyl transferase in large core OS assembly cluster:1425187 forward MW:41440 5457160 5458056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05117 product CDS Probable transcription regulator Mig-14:1426083 forward MW:33619 5458026 5459462 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05118 product CDS Hypothetical protein in large core OS assembly cluster 1426053:1427489 forward MW:53837 5459493 5460449 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05119 product CDS Glycosyltransferase in large core OS assembly cluster:1428476 forward MW:36911 5460484 5461254 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05120 product CDS: hypothetical protein 1428508:1429281 forward MW:29846 5461244 5462419 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05121 product CDS Oligosaccharide repeat unit polymerase Wzy; O-antigen ligase:1430446 forward MW:43789 5463099 5462461 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05122 product CDS Oligosaccharide repeat unit polymerase Wzy; O-antigen ligase:1431126 reverse MW:24212 5463412 5465214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05123 product CDS Lipid A export ATP-binding/permease protein MsbA:1433241 forward MW:65734 5465339 5466763 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05124 product CDS ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase:1434790 forward MW:49815 5467794 5466838 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05125 product CDS Cation transport ATPase:1435821 reverse MW:36338 5468646 5467831 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05126 product CDS OXIDOREDUCTASE, ALDO/KETO REDUCTASE FAMILY:1436673 reverse MW:29262 5469818 5468643 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05127 product CDS Oxidoreductase, FAD-binding:1437845 reverse MW:41918 5470199 5469867 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05128 product CDS Ethidium bromide-methyl viologen resistance protein EmrE:1438226 reverse MW:11698 5470268 5471548 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05129 product CDS 3-deoxy-D-manno-octulosonic-acid transferase:1439575 forward MW:46973 5473108 5471669 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05130 product CDS Type I secretion outer membrane protein, TolC precursor:1441135 reverse MW:52850 5473108 5473043 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5473271 5473375 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05131 product TPP 5473532 5475421 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05132 product CDS Thiamin biosynthesis protein ThiC:1443448 forward MW:69571 5475548 5476837 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05133 product CDS Predicted hydroxymethylpyrimidine transporter CytX:1444864 forward MW:45041 5477552 5476806 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05134 product CDS lipoprotein, putative:1445579 reverse MW:27378 5477552 5477481 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 5477731 5478378 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05135 product CDS ADP-ribose pyrophosphatase:1446405 forward MW:24198 5478369 5478821 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05136 product CDS Putative cytoplasmic protein:1446848 forward MW:16711 5479062 5480435 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05137 product CDS: hypothetical protein 1447089:1448462 forward MW:49849 5480432 5480878 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05138 product CDS hypothetical protein:1448905 forward MW:16966 5481070 5481456 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05139 product CDS: hypothetical protein 1449097:1449483 forward MW:14142 5481544 5482350 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05140 product CDS 3',5'-cyclic-nucleotide phosphodiesterase:1450377 forward MW:29171 5482438 5483055 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05141 product CDS Putative esterase, 1450465:1451082 forward MW:22660 5483145 5485049 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05142 product CDS Topoisomerase IV subunit B:1453076 forward MW:69489 5485049 5486038 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05143 product CDS: hypothetical protein 1453076:1454065 forward MW:36139 5486035 5486568 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05144 product CDS Transporter:1454595 forward MW:18958 5486579 5488834 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05145 product CDS Topoisomerase IV subunit A:1456861 forward MW:82785 5489018 5489713 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05146 product CDS lipoprotein, putative:1457740 forward MW:25440 5491602 5490061 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05147 product CDS HAMP domain protein:1459629 reverse MW:56559 5491691 5492947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05148 product CDS Phosphoserine phosphatase:1460974 forward MW:43823 5494771 5492984 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05149 product CDS Molecular chaperone:1462798 reverse MW:66723 5496864 5495023 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05150 product CDS Thiosulfate sulfurtransferase, rhodanese / Phosphatidylserine decarboxylase (EC 4.1.1.65):1464891 reverse MW:66606 5498445 5496910 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05151 product CDS hypothetical protein:1466472 reverse MW:57252 5498652 5499503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05152 product CDS Flagellar motor rotation protein MotA:1467530 forward MW:30394 5499507 5500532 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05153 product CDS Flagellar motor rotation protein MotB:1468559 forward MW:36986 5501629 5500598 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05154 product CDS Ribosome small subunit-stimulated GTPase EngC:1469656 reverse MW:37445 5501738 5502274 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05155 product CDS 3'-to-5' oligoribonuclease (orn):1470301 forward MW:20489 5502371 5502982 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05156 product CDS putative membrane protein:1471009 forward MW:22334 5504170 5503082 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05157 product CDS Iron-sulfur cluster-binding protein:1472143 reverse MW:38682 5504234 5505724 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05158 product CDS YjeF protein, function unknown:1473751 forward MW:50715 5505712 5506182 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05159 product CDS ATPase YjeE, predicted to have essential role in cell wall biosynthesis:1474209 forward MW:16973 5506203 5507612 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05160 product CDS N-acetylmuramoyl-L-alanine amidase:1475639 forward MW:50067 5506203 5506268 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5507612 5509549 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05161 product CDS DNA mismatch repair protein MutL:1477576 forward MW:71001 5509550 5510521 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05162 product CDS tRNA delta(2)-isopentenylpyrophosphate transferase:1478548 forward MW:35391 5510614 5510874 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05163 product CDS RNA-binding protein Hfq:1478901 forward MW:9353 5510887 5512188 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05164 product CDS GTP-binding protein HflX:1480215 forward MW:48694 5512285 5513472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05165 product CDS HflK protein:1481499 forward MW:43479 5513472 5514341 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05166 product CDS HflC protein:1482368 forward MW:33012 5514610 5515797 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05167 product CDS ATP phosphoribosyltransferase regulatory subunit:1483824 forward MW:42784 5515852 5517144 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05168 product CDS Adenylosuccinate synthetase:1485171 forward MW:47004 5517317 5519251 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05169 product CDS Methyl-accepting chemotaxis protein:1487278 forward MW:67964 5519442 5519356 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_05170 product tRNA-Leu(cag) 5519689 5519603 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_05171 product tRNA-Leu(cag) 5519915 5522548 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05172 product CDS 3'-to-5' exoribonuclease RNase R:1490575 forward MW:97669 5522545 5523306 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05173 product CDS 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB:1491333 forward MW:27284 5523522 5523947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05174 product CDS SSU ribosomal protein S6p:1491974 forward MW:16343 5523976 5524206 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05175 product CDS SSU ribosomal protein S18p:1492233 forward MW:8917 5524246 5525142 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05176 product CDS: hypothetical protein 1492273:1493169 forward MW:32267 5525162 5525608 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05177 product CDS LSU ribosomal protein L9p:1493635 forward MW:15470 5525732 5527126 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05178 product CDS Replicative DNA helicase:1495153 forward MW:51399 5527247 5529562 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05179 product CDS Fe-S OXIDOREDUCTASE (1.8.-.-):1497589 forward MW:86277 5532354 5529610 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05180 product CDS Permeases of the major facilitator superfamily:1500309 reverse MW:98360 5532626 5535904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05181 product CDS Large protein containing transglutaminase-like domain:1503931 forward MW:123418 5535992 5538487 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05182 note CDS Protein containing domains DUF404, DUF407, DUF403 1504019:1506514 forward MW:92765 product hypothetical protein 5538487 5539380 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05183 product CDS Protein containing transglutaminase-like domain, putative cysteine protease:1507407 forward MW:33660 5539537 5539983 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05184 product CDS Azurin:1508010 forward MW:16020 5539537 5539599 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 5541034 5540207 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05185 product CDS NAD synthetase:1509061 reverse MW:29870 5542284 5541061 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05186 product CDS Nicotinate phosphoribosyltransferase:1510311 reverse MW:46555 5543289 5542384 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05187 product CDS Transcriptional regulator, LysR family:1511358 reverse MW:36047 5543782 5544924 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05188 product CDS Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1):1512951 forward MW:40748 5543782 5543865 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 5545087 5546001 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05189 product CDS High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1):1514028 forward MW:32616 5546004 5547317 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05190 product CDS Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1):1515344 forward MW:47163 5547314 5548189 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05191 product CDS Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1):1516216 forward MW:32362 5548186 5548902 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05192 product CDS Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1):1516929 forward MW:26198 5549621 5550385 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05193 product CDS Short chain dehydrogenase:1518412 forward MW:27295 5551594 5550416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05194 product CDS Mannose-6-phosphate isomerase:1519657 reverse MW:44719 5552406 5551834 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05195 product CDS HupE-UreJ family metal transporter:1520433 reverse MW:18913 5552406 5552341 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5553048 5552431 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05196 product CDS Urease accessory protein UreG:1521075 reverse MW:22060 5553743 5553069 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05197 product CDS Urease accessory protein UreF:1521770 reverse MW:24907 5554240 5553740 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05198 product CDS Urease accessory protein UreE:1522267 reverse MW:18847 5555057 5554425 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05199 product CDS Transcriptional regulator, TetR family:1523084 reverse MW:23373 5555279 5557345 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05200 note CDS exported protein, conserved 1523126:1525372 forward MW:81190 product hypothetical protein 5558051 5557512 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05201 product CDS Bacterioferritin:1526081 reverse MW:20291 5558752 5558414 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05202 product CDS Osmotically inducible lipoprotein E precursor:1526779 reverse MW:12635 5559025 5559258 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05203 product CDS: hypothetical protein 1527052:1527285 forward MW:8285 5560136 5559255 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05204 product CDS membrane protein, putative:1528163 reverse MW:31201 5560290 5560580 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05205 product CDS Phosphate starvation-inducible protein psiF precursor:1528607 forward MW:10107 5560290 5560355 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5560769 5561779 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05206 product CDS membrane protein, putative:1529806 forward MW:36598 5563129 5561864 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05207 product CDS Putative heat shock protein YegD:1531156 reverse MW:46407 5563425 5564384 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05208 product CDS DnaJ-class molecular chaperone CbpA:1532411 forward MW:35152 5565550 5564420 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05209 note CDS ATP-binding region, ATPase-like:Histidine kinase A, N-terminal 1532447:1533577 reverse MW:41048 product hypothetical protein 5567443 5565743 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05210 product CDS Urease alpha subunit:1535470 reverse MW:60701 5567011 5567297 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05211 product 5_ureB_sRNA 5567977 5567669 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05212 product CDS Urease beta subunit:1536004 reverse MW:11155 5568507 5567974 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05213 product CDS Tabtoxin resistance protein:1536534 reverse MW:19451 5569060 5568518 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05214 product CDS GCN5-related N-acetyltransferase:1537087 reverse MW:19712 5569373 5569071 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05215 product CDS Urease gamma subunit:1537400 reverse MW:11042 5570304 5569459 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05216 product CDS Urease accessory protein UreD:1538331 reverse MW:31330 5571051 5570353 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05217 product CDS Urea ABC transporter, ATPase protein UrtE:1539078 reverse MW:25571 5572001 5571141 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05218 product CDS Urea ABC transporter, ATPase protein UrtD:1540028 reverse MW:30967 5573062 5571998 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05219 product CDS Urea ABC transporter, permease protein UrtC:1541104 reverse MW:38839 5574666 5573077 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05220 product CDS Urea ABC transporter, permease protein UrtB:1542693 reverse MW:56166 5574666 5574598 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 5576152 5574887 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05221 product CDS Urea ABC transporter, urea binding protein:1544179 reverse MW:46176 5576152 5576069 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 5579877 5576407 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05222 product CDS: hypothetical protein 1544434:1547904 reverse MW:128606 5581502 5580129 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05223 product CDS Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB:1549529 reverse MW:50641 5581945 5581586 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05224 product CDS Putative multicopper oxidases:1550047 reverse MW:15618 5582495 5582034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05225 product CDS Copper metallochaperone, bacterial analog of Cox17 protein:1550522 reverse MW:16841 5582495 5582433 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 5582688 5582527 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05226 product CDS Predicted transcriptional regulator:1550715 reverse MW:5816 5583573 5582833 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05227 product CDS Cobalt-precorrin-6x reductase:1551600 reverse MW:27237 5584682 5583570 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05228 product CDS Cobalt-precorrin-6 synthase, anaerobic:1552709 reverse MW:38660 5585884 5584682 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05229 product CDS Cobalt-precorrin-6y C5-methyltransferase / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating](EC 2.1.1.-):1553911 reverse MW:42685 5585925 5587355 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05230 product CDS Cobalamin biosynthesis protein CobG:1555382 forward MW:46190 5587352 5587978 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05231 product CDS Cobalt-precorrin-8x methylmutase:1556005 forward MW:22036 5587975 5588709 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05232 product CDS Cobalt-precorrin-2 C20-methyltransferase:1556736 forward MW:26610 5588709 5590412 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05233 product CDS Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase:1558439 forward MW:60082 5590778 5591587 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05234 product CDS: hypothetical protein 1558805:1559614 forward MW:28919 5591646 5592344 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05235 product CDS: hypothetical protein 1559673:1560371 forward MW:25493 5592337 5592972 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05236 product CDS: hypothetical protein 1560364:1560999 forward MW:24049 5593009 5593644 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05237 product CDS: hypothetical protein 1561036:1561671 forward MW:23589 5594247 5593651 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05238 product CDS membrane protein, MarC family:1562274 reverse MW:21542 5597106 5594317 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05239 product CDS Sensor histidine kinase/response regulator:1565133 reverse MW:102658 5597106 5597029 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 5598489 5597194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05240 product CDS Phosphoribosylamine--glycine ligase:1566516 reverse MW:45565 5600292 5598688 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05241 product CDS IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3):1568319 reverse MW:57527 5600695 5600375 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05242 product CDS DNA-binding protein Fis:1568680 reverse MW:10239 5601705 5600692 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05243 product CDS tRNA dihydrouridine synthase B:1569732 reverse MW:36601 5603383 5602022 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05244 product CDS Probable transmembrane protein:1571416 reverse MW:50979 5604286 5603408 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05245 product CDS Ribosomal protein L11 methyltransferase:1572319 reverse MW:31649 5605765 5604422 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05246 product CDS Biotin carboxylase of acetyl-CoA carboxylase:1573798 reverse MW:48573 5606238 5605783 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05247 product CDS Biotin carboxyl carrier protein of acetyl-CoA carboxylase:1574271 reverse MW:16109 5606767 5606315 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05248 product CDS 3-dehydroquinate dehydratase II:1574800 reverse MW:16360 5608681 5606897 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05249 product CDS Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase:1576714 reverse MW:63375 5608681 5608625 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 5609064 5608792 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05250 product CDS: hypothetical protein 1576825:1577097 reverse MW:10054 5609064 5609002 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 5609813 5609061 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05251 product CDS Flp pilus assembly protein TadD, contains TPR repeats:1577846 reverse MW:26912 5610739 5609855 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05252 product CDS Flp pilus assembly protein TadC:1578772 reverse MW:32489 5611628 5610741 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05253 product CDS Flp pilus assembly protein TadB:1579661 reverse MW:32914 5612903 5611647 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05254 product CDS Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily:1580936 reverse MW:46292 5614093 5612903 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05255 product CDS Flp pilus assembly protein CpaE:1582126 reverse MW:43104 5615349 5614090 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05256 product CDS Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly:1583256 reverse MW:39825 5615349 5615263 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 5616329 5615370 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05257 product CDS Flp pilus assembly protein RcpC/CpaB:1584362 reverse MW:34074 5616651 5616857 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05258 product CDS: hypothetical protein 1584684:1584890 forward MW:7370 5616898 5617305 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05259 product CDS Response regulator:1585338 forward MW:15468 5619987 5617639 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05260 product CDS Penicillin-insensitive transglycosylase & transpeptidase PBP-1C:1588020 reverse MW:86334 5620083 5620376 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05261 product CDS Permeases of the major facilitator superfamily:1588409 forward MW:10714 5625584 5620635 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05262 product CDS Alpha-2-macroglobulin:1593617 reverse MW:179553 5625584 5625504 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 5625828 5627168 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05263 product CDS DNA-damage-inducible protein F:1595201 forward MW:48078 5628064 5627162 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05264 product CDS esterase/lipase/thioesterase family protein:6064320 reverse MW:32155 5630252 5628339 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05265 product CDS Biosynthetic arginine decarboxylase:1598284 reverse MW:71379 5630712 5630341 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05266 product CDS Translation initiation factor SUI1-related protein:1598744 reverse MW:12722 5631464 5630922 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05267 product CDS Putative Nudix hydrolase YfcD:1599496 reverse MW:20043 5632543 5631464 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05268 product CDS: hypothetical protein 1599496:1600575 reverse MW:39849 5632850 5634505 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05269 product CDS Probable two-component response regulator:1602537 forward MW:62253 5635294 5634512 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05270 product CDS DNA-binding response regulator, LuxR family:1603326 reverse MW:28720 5635922 5635452 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05271 note CDS Conserved domain protein 1603484:1603957 reverse MW:16833 product hypothetical protein 5635998 5636453 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05272 product CDS Flp pilus assembly protein TadG:1604485 forward MW:16321 5636443 5639211 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05273 product CDS Sensory box histidine kinase:1607243 forward MW:103721 5641226 5639208 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05274 product CDS Probable transmembrane protein:1609258 reverse MW:68148 5642690 5641374 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05275 product CDS PAP2 family protein/DedA family protein:1610722 reverse MW:47056 5643365 5642694 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05276 product CDS DNA-3-methyladenine glycosylase II:1611397 reverse MW:24943 5643648 5644913 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05277 product CDS Gamma-glutamyl phosphate reductase:1612945 forward MW:44936 5644888 5645595 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05278 product CDS Nicotinate-nucleotide adenylyltransferase ## bacterial NadD family:1613627 forward MW:25840 5645656 5646042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05279 product CDS Iojap protein:1614074 forward MW:13912 5646052 5646519 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05280 product CDS LSU methyltransferase RlmH ## ybeA 1614084:1614551 forward MW:17695 5646549 5648444 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05281 product CDS Penicillin-binding protein 2 (PBP-2):1616476 forward MW:70130 5648434 5649579 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05282 product CDS Rod shape-determining protein RodA:1617611 forward MW:41694 5649597 5650604 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05283 product CDS Membrane-bound lytic murein transglycosylase B precursor:1618636 forward MW:37551 5650604 5651632 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05284 product CDS Rare lipoprotein A precursor:1619664 forward MW:36810 5650604 5650693 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 5651874 5653034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05285 product CDS D-alanyl-D-alanine carboxypeptidase:1621066 forward MW:42350 5651874 5651948 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5653089 5653400 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05286 product CDS Proposed lipoate regulatory protein YbeD:1621432 forward MW:10019 5653400 5654056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05287 product CDS Octanoate-[acyl-carrier-protein]-protein-N-octan oyltransferase:1622088 forward MW:23736 5654049 5655056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05288 product CDS Lipoate synthase:1623088 forward MW:37600 5656806 5655469 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05289 product CDS Membrane-bound lytic murein transglycosylase B precursor:335211 forward MW:48144 5656806 5656699 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 36 product putative signal peptide 5657045 5656890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05290 product CDS: hypothetical protein 333635:333790 forward MW:5831 5657417 5657211 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05291 product CDS: hypothetical protein 333263:333469 forward MW:8027 5658459 5657422 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05292 product CDS DNA polymerase III delta subunit:333258 forward MW:37399 5659106 5658501 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05293 product CDS LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B):332179 forward MW:22154 5659106 5659035 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 5661802 5659196 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05294 product CDS Leucyl-tRNA synthetase:331484 forward MW:96955 5662114 5662464 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05295 product CDS: hypothetical protein 328216:328566 reverse MW:12513 5662535 5663305 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05296 product CDS Putative membrane protein:328145 reverse MW:28124 5664877 5663357 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05297 product CDS Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE:327323 forward MW:55983 5665761 5664919 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05298 product CDS Magnesium and cobalt efflux protein CorC:325761 forward MW:31395 5666267 5665767 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05299 product CDS: metal-dependent hydrolase 324413:324913 forward MW:18865 5667282 5666260 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05300 product CDS Phosphate starvation-inducible ATPase PhoH with RNA binding motif:324420 forward MW:38324 5668788 5667460 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05301 product CDS tRNA-i(6)A37 methylthiotransferase:323220 forward MW:49489 5668919 5669245 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05302 product CDS: hypothetical protein 321435:321761 reverse MW:12503 5669836 5669288 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05303 product CDS FOG: TPR repeat, SEL1 subfamily:321392 forward MW:19665 5671415 5670132 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05304 product CDS Glutamate-1-semialdehyde aminotransferase:320548 forward MW:45378 5672238 5671621 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05305 product CDS Thiamin-phosphate pyrophosphorylase:319059 forward MW:22007 5673059 5672262 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05306 product CDS Phosphomethylpyrimidine kinase:318418 forward MW:23252 5673483 5675489 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05307 product CDS Sensor histidine kinase:317197 reverse MW:74362 5673483 5673539 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 5675648 5677111 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05308 product CDS AMP nucleosidase:315032 reverse MW:54530 5677191 5677823 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05309 product CDS Ribosomal large subunit pseudouridine synthase E ## LSU 312857:313489 reverse MW:23684 5678316 5677837 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05310 product CDS Transcriptional regulator, AsnC family:312843 forward MW:18142 5678371 5678621 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05311 product P24 5678724 5679923 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05312 product CDS: hypothetical protein 310757:311248 reverse MW:18381 5678724 5678798 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5680823 5679930 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05313 product CDS Cobalt-zinc-cadmium resistance protein:310750 forward MW:31898 5681258 5680839 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05314 product CDS Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase):309841 forward MW:14764 5682291 5681728 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05315 product CDS RNA:NAD 2'-phosphotransferase:308952 forward MW:20836 5683155 5682406 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05316 product CDS Signal transduction histidine kinase:2612224 forward MW:77719 5684495 5683182 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05317 product CDS FOG: PAS/PAC domain:307498 forward MW:48269 5685780 5684680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05318 product CDS GGDEF domain protein:306000 forward MW:40965 5686670 5685822 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05319 product CDS: hypothetical protein 2433934:2434827 forward MW:34003 5687052 5687978 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05320 product CDS D-galactose 1-dehydrogenase:303628 reverse MW:33569 5688011 5689024 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05321 product CDS Esterase/lipase:302627 reverse MW:35480 5689571 5689032 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05322 product CDS: hypothetical protein 301109:301648 forward MW:19652 5690365 5689691 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05323 product CDS Putative tRNA-m1A22 methylase:300989 forward MW:25111 5690554 5690937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05324 product CDS Putative translation initiation inhibitor, yjgF family:300126 reverse MW:13678 5690987 5691610 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05325 product CDS Uncharacterized glutathione S-transferase-like protein:299693 reverse MW:23518 5691990 5693456 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05326 product CDS DnaJ-class molecular chaperone:298144 reverse MW:32684 5694895 5693555 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05327 product CDS Transcriptional regulator, GntR family domain / Aspartate aminotransferase:297125 forward MW:49830 5695090 5696268 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05328 product CDS: hypothetical protein 294412:295590 reverse MW:41625 5696318 5696746 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05329 product CDS ATP-dependent helicase HrpB:294362 reverse MW:15472 5698116 5696971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05330 product CDS hypothetical protein:293709 forward MW:46483 5699006 5698533 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05331 product CDS Transposase:292147 forward MW:17562 5699577 5699705 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05332 product hypothetical protein 5700679 5699780 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05333 product CDS unnamed protein product:290900 forward MW:33826 5701843 5700800 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05334 product CDS: hypothetical protein 288837:289880 forward MW:38762 5702386 5704920 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05335 product CDS ATP-dependent helicase HrpB:288294 reverse MW:92819 5705097 5705348 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05336 product hypothetical protein 5706098 5705526 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05337 product hypothetical protein 5706664 5706170 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05338 product CDS Uncharacterized protein ImpD:5417341 forward MW:17724 5707804 5708163 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05339 product hypothetical protein 5709320 5709072 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05340 product CDS hypothetical protein:281608 forward MW:9182 5709605 5710597 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05341 product CDS D-alanyl-D-alanine carboxypeptidase:281075 reverse MW:36153 5710731 5711534 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05342 product CDS: hypothetical protein 279146:279949 reverse MW:30564 5712698 5711550 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05343 product CDS endonuclease/exonuclease/phosphatase family protein:279130 forward MW:42943 5713396 5712734 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05344 product CDS: hypothetical protein 277284:277946 forward MW:24751 5713592 5714296 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05345 note CDS Uncharacterized protein conserved in bacteria 276384:277241 reverse MW:29910 product hypothetical protein 5714566 5715042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05346 product CDS: hypothetical protein 275638:276114 reverse MW:17498 5715061 5715675 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05347 product CDS DNA polymerase III alpha subunit:275616 reverse MW:22286 5715790 5717118 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05348 product CDS ATP-dependent RNA helicase 273562:274890 reverse MW:48669 5718477 5717203 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05349 product CDS NAD(FAD)-utilizing dehydrogenases:273477 forward MW:45016 5719448 5718531 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05350 product CDS Deacetylases, including yeast histone deacetylase and acetoin utilization protein:272149 forward MW:34085 5719584 5720153 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05351 product CDS acetyltransferase, GNAT family:271096 reverse MW:21545 5720291 5721160 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05352 product CDS Acyl-CoA thioesterase II:270389 reverse MW:32694 5721157 5721747 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05353 product CDS hydrolase, haloacid dehalogenase-like family:269523 reverse MW:21301 5722905 5721916 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05354 product CDS putative exported protein:268764 forward MW:36834 5722905 5722840 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 5723800 5722910 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05355 product CDS YpfJ protein, zinc metalloprotease superfamily:267770 forward MW:31722 5725220 5723937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05356 product CDS MFS general substrate transporter:266743 forward MW:45237 5726552 5725467 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05357 product CDS tRNA (uracil-5-)-methyltransferase:265213 forward MW:41203 5727844 5726549 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05358 product CDS Xanthine/uracil/thiamine/ascorbate permease family protein:264131 forward MW:44963 5728109 5728639 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05359 product CDS Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT:262595 reverse MW:19730 5728636 5729625 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05360 product CDS Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS:262044 reverse MW:35066 5729622 5731823 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05361 product CDS Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR:261058 reverse MW:79077 5732186 5733625 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05362 product CDS putative Cytochrome bd2, subunit I / Cyanide insensitive terminal oxidase, subunit I:258494 reverse MW:53575 5733629 5734636 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05363 product CDS putative Cytochrome bd2, subunit II / Cyanide insensitive terminal oxidase, subunit II:257051 reverse MW:37136 5734658 5734825 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05364 product CDS Cyanide insensitive terminal oxidase, putative subunit III:256022 reverse MW:6039 5736037 5734913 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05365 product CDS 16S rRNA methylase RsmC:255767 forward MW:40687 5736400 5736167 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05366 product CDS DNA-binding HTH domain-containing proteins:254513 forward MW:8396 5736738 5737514 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05367 product CDS Ferredoxin--NADP(+) reductase:253942 reverse MW:29586 5738160 5737714 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05368 product CDS Large-conductance mechanosensitive channel:252966 forward MW:15617 5738355 5739722 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05369 product CDS DNA repair protein RadA:252325 reverse MW:48840 5740111 5739743 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05370 product CDS: hypothetical protein 250569:250937 forward MW:14038 5740397 5742472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05371 product CDS Carbon starvation protein A:250283 reverse MW:74198 5742500 5742697 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05372 product CDS, Hypothetical small protein yjiX 247983:248180 reverse MW:7596 5742793 5743770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05373 product CDS Putative metal chaperone, involved in Zn homeostasis, GTPase of family 246910:247887 reverse MW:35919 5744367 5743798 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05374 product CDS Membrane associated protein:246882 forward MW:20756 5745765 5744512 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05375 product CDS Serine hydroxymethyltransferase:246168 forward MW:44874 5746053 5748821 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05376 product CDS: hypothetical protein 241859:244627 reverse MW:97498 5752633 5748902 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05377 product CDS Sensory box/GGDEF family protein:241778 forward MW:141135 5753120 5754784 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05378 product CDS ABC transporter, ATP-binding protein:237560 reverse MW:61572 5755334 5754837 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05379 product CDS Transcription elongation factor GreB-related protein:235843 forward MW:18080 5755764 5755411 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05380 product CDS lipoprotein, putative:235269 forward MW:13260 5755764 5755702 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 5755963 5756436 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05381 product CDS type III chaperone ShcO1:234717 reverse MW:17200 5756449 5756817 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05382 product CDS type III effector HopS1:234231 reverse MW:12938 5756830 5757351 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05383 product CDS hypothetical protein:233778 reverse MW:16659 5757652 5758260 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05384 product CDS type III effector HopO1-1:232953 reverse MW:20098 5758266 5759435 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05385 product CDS type III effector HopT1-1:232414 reverse MW:42084 5759782 5760687 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05386 product CDS type III effector HopO1-1:230898 reverse MW:32885 5761261 5761734 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05387 product CDS type III chaperone ShcS2:229419 reverse MW:17049 5761749 5762282 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05388 product CDS type III effector HopS1:234231 reverse MW:12938 5764074 5762221 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05389 product CDS putative outermembrane protein:228459 forward MW:69926 5764074 5764000 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5764625 5764137 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05390 product CDS: hypothetical protein 225986:226543 forward MW:19548 5764625 5764566 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 5764902 5767337 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05391 product CDS ATP-dependent protease La Type II:225778 reverse MW:89686 5767512 5767841 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05392 product CDS: hypothetical protein 222839:223198 reverse MW:13287 5767967 5768455 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05393 product CDS Putative inner membrane protein (Fragment):222713 reverse MW:18411 5768567 5768875 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05394 product CDS: hypothetical protein 221805:222113 reverse MW:11568 5769030 5769647 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05395 product CDS FKBP-type peptidyl-prolyl cis-trans isomerase fklB:221650 reverse MW:21755 5769969 5769727 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05396 product CDS: hypothetical protein 220711:220953 forward MW:9299 5771902 5770319 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05397 product CDS Peptide chain release factor 3:220361 forward MW:59692 5772247 5772960 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05398 product CDS L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1):218433 reverse MW:24757 5772975 5773868 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05399 product CDS Glycine betaine/L-proline ABC transporter, periplasmic substrate- binding protein:217705 reverse MW:33130 5772975 5773037 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 5773882 5774535 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05400 product CDS L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1):216798 reverse MW:22854 5774532 5775689 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05401 product CDS L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1):216148 reverse MW:43108 5778220 5775737 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05402 product CDS: hypothetical protein 212460:214943 forward MW:94258 5778653 5779816 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05403 product CDS Ornithine decarboxylase / Arginine decarboxylase (EC 4.1.1.19):212027 reverse MW:43288 5780097 5781296 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05404 product CDS: hypothetical protein 209384:210583 reverse MW:43984 5781332 5782345 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05405 product CDS: hypothetical protein 208335:209348 reverse MW:37155 5782490 5785015 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05406 product CDS Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB:208190 reverse MW:92576 5786077 5785103 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05407 product CDS Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2):205577 forward MW:35838 5787045 5786077 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05408 product CDS Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2):204603 forward MW:34772 5787967 5787056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05409 product CDS Dipeptide transport system permease protein DppC (TC 3.A.1.5.2):203624 forward MW:32560 5788988 5787978 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05410 product CDS Dipeptide transport system permease protein DppB (TC 3.A.1.5.2):202702 forward MW:36886 5790658 5789063 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05411 product CDS Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2):201617 forward MW:59119 5790658 5790587 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 5792103 5790724 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05412 product CDS Outer membrane porin, OprD family:199956 forward MW:50642 5792103 5792041 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 5793851 5792259 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05413 product CDS Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2):198421 forward MW:59302 5793851 5793783 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 5795803 5794181 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05414 product CDS Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2):196499 forward MW:60492 5795803 5795729 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5797668 5796061 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05415 product CDS Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2):194619 forward MW:59574 5797668 5797594 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5799321 5797765 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05416 note CDS conserved domain protein 191359:192915 forward MW:57945 product hypothetical protein 5800242 5799529 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05417 product CDS probable periplasmic protein 190438:191151 forward MW:25689 5800242 5800168 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5800436 5801695 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05418 product CDS Sensor histidine kinase PrrB (RegB):190244 reverse MW:46459 5801692 5802255 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05419 product CDS Dna binding response regulator PrrA (RegA):188988 reverse MW:20716 5802345 5804078 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05420 product CDS ABC transporter, ATP-binding protein:188335 reverse MW:65519 5804176 5804925 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05421 product CDS Predicted D-glucarate or D-galactorate regulator, GntR family:186441 reverse MW:25355 5805216 5806127 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05422 product CDS 5-dehydro-4-deoxyglucarate dehydratase:185464 reverse MW:32712 5806293 5807678 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05423 product CDS D-galactarate permease:184387 reverse MW:50046 5807689 5809242 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05424 product CDS D-galactarate dehydratase:182991 reverse MW:56114 5809409 5809648 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05425 product CDS: hypothetical protein 181032:181271 reverse MW:8924 5809837 5810031 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05426 note CDS conserved domain protein 180649:180843 reverse MW:6757 product hypothetical protein 5810478 5810278 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05427 product hypothetical protein 5811488 5810703 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05428 product CDS membrane protein, putative:179977 forward MW:27136 5813403 5811580 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05429 product CDS GAF domain/GGDEF domain/EAL domain protein:179100 forward MW:68596 5813742 5813575 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05430 product hypothetical protein 5814268 5813768 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05431 product CDS GAF domain protein:176912 forward MW:18552 5816137 5814512 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05432 product CDS Methyl-accepting chemotaxis protein I (serine chemoreceptor protein):176168 forward MW:57616 5816397 5816218 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05433 product hypothetical protein 5817344 5816394 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05434 product CDS Proline iminopeptidase:174286 forward MW:35160 5818203 5817439 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05435 product CDS Transcriptional regulator ahyR/asaR family:173241 forward MW:28323 5818387 5818542 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05436 product CDS: hypothetical protein 172138:172293 reverse MW:6008 5818542 5819489 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05437 product CDS Putative glutathione transporter, permease component:172138 reverse MW:34573 5819486 5820349 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05438 product CDS Dipeptide transport system permease protein DppC (TC 3.A.1.5.2):171194 reverse MW:31409 5820346 5821350 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05439 product CDS Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1):170334 reverse MW:35819 5821347 5822327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05440 product CDS Peptide ABC transporter, ATP-binding protein:169333 reverse MW:35138 5822377 5823891 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05441 product CDS Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1):168303 reverse MW:56220 5822377 5822457 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 5824050 5825228 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05442 product CDS Na+/H+ antiporter NhaA type:166630 reverse MW:40638 5825277 5825585 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05443 product CDS: hypothetical protein 165095:165403 reverse MW:11181 5825680 5826984 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05444 product CDS methyl-accepting chemotaxis protein, putative:164850 reverse MW:43836 5829332 5827062 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05445 product CDS Catalase / Peroxidase (EC 1.11.1.7):163618 forward MW:82656 5829738 5829854 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05446 product CDS: hypothetical protein 160826:160942 reverse MW:4270 5830390 5829902 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05447 product CDS: hypothetical protein 160503:160778 forward MW:10220 5830390 5830310 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 5830583 5831575 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05448 product CDS Ethanolamine operon regulatory protein:160082 reverse MW:36482 5831644 5832576 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05449 product CDS Protein involved in meta-pathway of phenol degradation:158979 reverse MW:31978 5831644 5831730 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 5832622 5834067 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05450 product CDS Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit:158058 reverse MW:51194 5836251 5835442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05451 product CDS Probable carboxyvinyl-carboxyphosphonate phosphorylmutase:155238 forward MW:28540 5836705 5836325 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05452 product CDS transcriptional regulator, AsnC family:154355 forward MW:18319 5838376 5837093 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05453 product CDS: hypothetical protein 152304:153587 forward MW:45161 5838729 5838523 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05454 product CDS MbtH-like protein:152157 forward MW:7907 5841112 5838761 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05455 product CDS: hypothetical protein 149568:151919 forward MW:86958 5851390 5841149 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05456 product CDS Long-chain-fatty-acid--CoA ligase:149531 forward MW:379630 5856817 5851556 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05457 product CDS Long-chain-fatty-acid--CoA ligase:139124 forward MW:195143 5857830 5856880 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05458 product CDS: hypothetical protein 132850:133800 forward MW:36570 5859077 5858690 tmRNA gene ssrA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_05459 product transfer-messenger RNA, SsrA 5859077 5858690 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05460 product tmRNA 5859472 5859188 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05461 product CDS: hypothetical protein 131208:131492 forward MW:9822 5859472 5859404 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 5860246 5859764 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05462 product CDS tmRNA-binding protein SmpB:130916 forward MW:18397 5860362 5861765 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05463 product CDS Sodium-dependent transporter family protein:130318 reverse MW:50759 5861773 5862207 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05464 product CDS Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W:128907 reverse MW:15888 5862200 5862514 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05465 note CDS UPF0125 protein yfjF 128166:128480 reverse MW:11420 product hypothetical protein 5863101 5862580 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05466 product CDS Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex:128100 forward MW:19072 5863296 5863607 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05467 product CDS Ferric uptake regulation protein FUR:127411 reverse MW:12637 5865360 5863687 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05468 product CDS DNA repair protein RecN:126993 forward MW:61382 5865629 5866192 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05469 product CDS Heat shock protein GrpE:125051 reverse MW:20703 5866303 5868219 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05470 product CDS Chaperone protein DnaK:124377 reverse MW:68713 5868453 5868539 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05471 product gyrA 5868545 5869687 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05472 product CDS Chaperone protein DnaJ:122135 reverse MW:40464 5869710 5870513 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05473 product CDS Dihydrodipicolinate reductase:120970 reverse MW:28197 5870730 5870651 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05474 product P31 5870730 5871866 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05475 product CDS Carbamoyl-phosphate synthase small chain:119950 reverse MW:40651 5872002 5875223 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05476 product CDS Carbamoyl-phosphate synthase large chain:118678 reverse MW:117592 5875220 5875696 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05477 product CDS Transcription elongation factor GreA:115460 reverse MW:17392 5876087 5875776 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05478 product CDS: RNA binding protein 114593:114904 forward MW:11369 5876191 5876841 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05479 product CDS Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E:114489 reverse MW:24187 5877026 5878939 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05480 product CDS Cell division protein FtsH:113645 reverse MW:68933 5878948 5879799 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05481 product CDS Dihydropteroate synthase:111732 reverse MW:29920 5879816 5881159 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05482 product CDS Phosphoglucosamine mutase:110789 reverse MW:45311 5881226 5881981 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05483 product CDS Triosephosphate isomerase:109442 reverse MW:25453 5881938 5882366 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05484 product CDS Preprotein translocase subunit SecG (TC 3.A.5.1.1):108436 reverse MW:4170 5882413 5882498 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_05485 product tRNA-Leu(gag) 5882594 5882670 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_05486 product tRNA-Met(cat) 5882801 5883259 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05487 product CDS: clustered with transcription termination protein NusA 107421:107897 reverse MW:17671 5883319 5884800 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05488 product CDS Transcription termination protein NusA:107361 reverse MW:54415 5884828 5887353 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05489 product CDS Translation initiation factor 2:105852 reverse MW:90544 5887513 5887929 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05490 product CDS Ribosome-binding factor A:103167 reverse MW:15448 5887933 5888850 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05491 product CDS tRNA pseudouridine synthase B ## tRNA Psi55:102747 reverse MW:33519 5888957 5889065 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05492 product S15 5889009 5889278 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05493 product CDS SSU ribosomal protein S15p (S13e):101671 reverse MW:10000 5889454 5891559 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05494 product CDS Polyribonucleotide nucleotidyltransferase:101226 reverse MW:74895 5891848 5892201 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05495 product CDS Osmotically inducible protein OsmY:98832 reverse MW:12066 5891848 5891922 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5892730 5892356 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05496 product CDS: hypothetical protein 97950:98324 forward MW:13759 5895698 5892690 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05497 product CDS putative exported protein:97990 forward MW:108715 5896794 5895778 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05498 product CDS Methyltransferase:94902 forward MW:37273 5896943 5898526 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05499 product CDS Phosphodiesterase/alkaline phosphatase D:93737 reverse MW:59022 5898631 5899581 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05500 product CDS membrane protein, putative:92049 reverse MW:33524 5899951 5899568 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05501 product CDS 4-carboxymuconolactone decarboxylase:91112 forward MW:13894 5901014 5899983 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05502 product CDS K+-dependent Na+/Ca+ exchanger related-protein:90697 forward MW:36018 5901449 5901081 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05503 product CDS Rare lipoprotein A:89599 forward MW:13266 5901449 5901387 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 5903011 5901548 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05504 product CDS Aspartyl-tRNA(Asn) amidotransferase subunit B @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)87669:89132 forward MW:53508 5904473 5903022 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05505 product CDS Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)86207:87658 forward MW:51929 5904775 5904488 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05506 product CDS Aspartyl-tRNA(Asn) amidotransferase subunit C @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)85905:86192 forward MW:10503 5904982 5906019 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05507 product CDS Rod shape-determining protein MreB:85698 reverse MW:37004 5906277 5907329 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05508 product CDS Rod shape-determining protein MreC:84430 reverse MW:38463 5907322 5907813 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05509 product CDS Rod shape-determining protein MreD:83358 reverse MW:18498 5907881 5908483 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05510 product CDS Septum formation protein Maf:82799 reverse MW:21168 5908480 5909937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05511 product CDS Cytoplasmic axial filament protein CafA and Ribonuclease G:82200 reverse MW:54677 5910119 5913934 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05512 product CDS: Possible exported protein 76746:80561 reverse MW:137283 5913983 5914828 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05513 product CDS: Predicted amidohydrolase 75852:76697 reverse MW:30371 5914831 5916270 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05514 product CDS TldD protein, part of proposed TldE/TldD proteolytic complex (PMID) 74410:75849 reverse MW:50331 5916840 5916319 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05515 product CDS: Putative alpha helix protein 73840:74361 forward MW:20137 5916948 5918294 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05516 product CDS TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex (PMID) 72386:73744 reverse MW:48420 5918599 5918994 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05517 product CDS FagA protein:72081 reverse MW:15307 5918987 5920363 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05518 product CDS Fumarate hydratase class II:71693 reverse MW:48802 5920396 5920857 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05519 product CDS FOG: TPR repeat:70284 reverse MW:17379 5920858 5921469 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05520 product CDS Manganese superoxide dismutase:69822 reverse MW:22686 5921497 5921625 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05521 product CDS: hypothetical protein 69055:69183 reverse MW:4703 5921912 5921640 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05522 product CDS Phosphocarrier protein, nitrogen regulation associated:69040 forward MW:9736 5922786 5921929 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05523 product CDS: Hypothetical ATP-binding protein 67894:68751 forward MW:32215 5923253 5922789 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05524 product CDS PTS system nitrogen-specific IIA component, PtsN:67891 forward MW:14961 5923573 5923265 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05525 product CDS Ribosome hibernation protein YhbH:67415 forward MW:11579 5925117 5923648 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05526 product CDS RNA polymerase sigma-54 factor RpoN:67032 forward MW:51536 5926049 5925324 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05527 product CDS Lipopolysaccharide ABC transporter, ATP-binding protein LptB:65356 forward MW:26528 5926598 5926050 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05528 product CDS LptA, protein essential for LPS transport across the periplasm:64630 forward MW:19693 5926598 5926524 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 5927157 5926585 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05529 product CDS Uncharacterized protein YrbK clustered with lipopolysaccharide transporters:64095 forward MW:19579 5927705 5927166 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05530 product CDS 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase:63514 forward MW:19465 5928679 5927705 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05531 product CDS Arabinose 5-phosphate isomerase:62975 forward MW:34441 5928984 5929793 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05532 product CDS Uncharacterized ABC transporter, ATP-binding protein YrbF:61696 reverse MW:29475 5929793 5930590 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05533 product CDS Uncharacterized ABC transporter, permease component YrbE:60887 reverse MW:28347 5930590 5931057 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05534 product CDS Uncharacterized ABC transporter, periplasmic component YrbD:60090 reverse MW:16349 5931087 5931737 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05535 product CDS Uncharacterized ABC transporter, auxiliary component YrbC:59593 reverse MW:23897 5931087 5931155 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 5931734 5932039 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05536 product CDS Uncharacterized protein YrbB:58946 reverse MW:10690 5932154 5932393 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05537 product CDS YrbA protein:58526 reverse MW:8902 5932416 5933681 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05538 product CDS UDP-N-acetylglucosamine 1-carboxyvinyltransferase:58264 reverse MW:44998 5933836 5934471 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05539 product CDS ATP phosphoribosyltransferase catalytic subunit:56844 reverse MW:22995 5934596 5935942 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05540 product CDS Histidinol dehydrogenase:56084 reverse MW:48123 5935942 5936994 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05541 product CDS Histidinol-phosphate aminotransferase:54738 reverse MW:38732 5937749 5938201 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05542 product CDS probable membrane protein 52479:52931 reverse MW:17510 5939386 5938226 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05543 product CDS Outer membrane stress sensor protease DegS:52454 forward MW:40928 5939498 5940256 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05544 product CDS: Hypothetical protein 50424:51182 reverse MW:27719 5940410 5941327 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05545 product CDS Sulfate adenylyltransferase subunit 2:50270 reverse MW:35312 5941338 5943236 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05546 product CDS Sulfate adenylyltransferase subunit 1 / Adenylylsulfate kinase (EC 2.7.1.25):49342 reverse MW:69084 5943809 5943366 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05547 product CDS Putative cytochrome d ubiquinol oxidase subunit III (Cytochrome bd-I oxidase subunit III):47314 forward MW:16635 5943949 5944584 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05548 product CDS Alpha/beta hydrolase:46731 reverse MW:22847 5944624 5945973 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05549 product CDS Tryptophanyl-tRNA synthetase:46056 reverse MW:49636 5946036 5947130 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05550 product CDS ATPase, AFG1 family:44644 reverse MW:42159 5948222 5947212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05551 product CDS Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain:43468 forward MW:38283 5948618 5949046 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05552 product CDS LSU ribosomal protein L13p (L13Ae):42062 reverse MW:15863 5949061 5949453 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05553 product CDS SSU ribosomal protein S9p (S16e):41619 reverse MW:14602 5949734 5950351 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05554 product CDS Stringent starvation protein A:40946 reverse MW:23377 5950369 5950782 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05555 product CDS Stringent starvation protein B:40311 reverse MW:14996 5951421 5950843 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05556 product CDS 21 kDa hemolysin precursor:39837 forward MW:18226 5951421 5951341 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 5952011 5951418 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05557 product CDS Phosphoheptose isomerase:39262 forward MW:21347 5952567 5952181 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05558 product CDS Predicted endonuclease distantly related to archaeal Holliday junction resolvase:38499 forward MW:14439 5954378 5952564 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05559 product CDS LppC putative lipoprotein:38116 forward MW:65165 5954378 5954292 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 5954658 5955527 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05560 product CDS rRNA small subunit methyltransferase I:35944 reverse MW:28768 5955613 5955968 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05561 product RNaseP_arch 5955614 5955971 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05562 product RNaseP_bact_a 5955618 5955960 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05563 product RNaseP_bact_b 5956278 5956733 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05564 product CDS Cell division protein MraZ:34402 reverse MW:17166 5956736 5957677 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05565 product CDS rRNA small subunit methyltransferase H:33944 reverse MW:34252 5957674 5957967 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05566 product CDS Cell division protein FtsL:33006 reverse MW:10898 5957964 5959694 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05567 product CDS Cell division protein FtsI [Peptidoglycan synthetase]:32716 reverse MW:63092 5959694 5961157 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05568 product CDS UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase:30986 reverse MW:52197 5961150 5962520 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05569 product CDS UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase:29518 reverse MW:46575 5962520 5963602 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05570 product CDS Phospho-N-acetylmuramoyl-pentapeptide- transferase:28160 reverse MW:39484 5963608 5964954 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05571 product CDS UDP-N-acetylmuramoylalanine--D-glutamate ligase:27072 reverse MW:47981 5964951 5966165 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05572 product CDS Cell division protein FtsW:25729 reverse MW:43968 5966155 5967225 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05573 product CDS UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase:24525 reverse MW:37798 5967218 5968678 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05574 product CDS UDP-N-acetylmuramate--alanine ligase:23462 reverse MW:52672 5968675 5969634 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05575 product CDS D-alanine--D-alanine ligase:22005 reverse MW:34103 5969638 5970507 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05576 product CDS Cell division protein FtsQ:20967 reverse MW:30075 5970522 5971778 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05577 product CDS Cell division protein FtsA:20149 reverse MW:44203 5971866 5973053 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05578 product CDS Cell division protein FtsZ:18814 reverse MW:41550 5973166 5974077 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05579 product CDS UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase:17514 reverse MW:33227 5974668 5974213 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05580 product CDS Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives:16467 forward MW:17140 5974973 5977714 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05581 product CDS Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1):15707 reverse MW:103431 5977826 5979043 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05582 product CDS Glutamate N-acetyltransferase / N-acetylglutamate synthase (EC 2.3.1.1):12854 reverse MW:42304 5979101 5979727 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05583 product CDS Glutathione S-transferase:11579 reverse MW:23507 5979730 5980680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05584 product CDS Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) / Thiamin-phosphate pyrophosphorylase-like protein:10935 reverse MW:33538 5981400 5980822 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05585 product CDS Cob(I)alamin adenosyltransferase PduO 9280:9858 forward MW:20948 5983452 5981416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05586 product CDS Sensory box histidine kinase 7228:9264 forward MW:75879 5984417 5983497 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05587 product CDS 2-dehydropantoate 2-reductase 6263:7183 forward MW:33017 5984587 5985066 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05588 note CDS UPF0234 protein YajQ 5614:6093 reverse MW:17908 product hypothetical protein 5985189 5986019 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05589 product CDS Small-conductance mechanosensitive channel 4661:5491 reverse MW:29732 5986653 5986138 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05590 product CDS: hypothetical protein 4111:4542 forward MW:15775 5986653 5986570 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 5987003 5986734 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05591 product CDS: hypothetical protein 3677:3946 forward MW:9081 5988685 5987000 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05592 product CDS: hypothetical protein 5330784:5331809 forward MW:37859 5990706 5988682 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05593 product CDS: Putative transmembrane protein 49:1998 forward MW:72617 5993264 5990706 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05594 product CDS VgrG protein:6111889 forward MW:93616 5993817 5993503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05595 product CDS: hypothetical protein 4098327:4098641 forward MW:10905 5995396 5993846 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05596 product CDS AmpG permease:4098298 forward MW:56503 5995807 5995451 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05597 product CDS methylated-DNA--protein-cysteine methyltransferase-related protein:4096693 forward MW:12833 5995972 5996979 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05598 product CDS Peptide chain release factor RF-3:4096172 reverse MW:37405 5995972 5996034 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 5997798 5997028 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05599 product CDS Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases):4095116 forward MW:27261 5998105 5998599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05600 product CDS FxsA protein:4094039 reverse MW:18308 5998712 5998822 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05601 product Pseudomon-groES 5998855 5999148 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05602 product CDS Heat shock protein 60 family co-chaperone GroES:4093289 reverse MW:10267 5999198 6000841 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05603 product CDS Heat shock protein 60 family chaperone GroEL:4092946 reverse MW:57142 6001669 6000926 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05604 product CDS PAP2 superfamily protein:4091218 forward MW:27443 6001846 6002529 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05605 product CDS DNA-binding response regulator ColR:4090298 reverse MW:25471 6002519 6003808 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05606 product CDS two-component system sensor protein:4089625 reverse MW:47964 6004009 6004689 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05607 product CDS SAM-dependent methyltransferases:4088135 reverse MW:26344 6004694 6005416 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05608 product CDS InaA protein:4087450 reverse MW:27296 6005413 6005640 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05609 product CDS: hypothetical protein 4086504:4086731 reverse MW:7958 6006762 6005665 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05610 product CDS putative exported protein:4086479 forward MW:40215 6007843 6006779 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05611 product CDS Iron-regulated protein A precursor:4085365 forward MW:38605 6007843 6007763 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 6009331 6007904 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05612 product CDS Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites:4084240 forward MW:51531 6009331 6009242 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 6010986 6009628 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05613 product CDS Iron-regulated protein A precursor:4082516 forward MW:47075 6010986 6010927 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 6013213 6011162 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05614 product CDS GGDEF domain/EAL domain protein:4080982 forward MW:76899 6014181 6013600 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05615 product CDS Superoxide dismutase [Fe]:4078544 forward MW:21364 6014976 6014374 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05616 product CDS Arginine exporter protein ArgO:4077770 forward MW:21339 6015072 6015971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05617 product CDS Chromosome initiation inhibitor:4077072 reverse MW:33138 6016043 6017035 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05618 product CDS Nucleoside-diphosphate-sugar epimerases:4076101 reverse MW:36983 6017119 6017970 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05619 note CDS Conserved domain protein 4074174:4075025 reverse MW:30847 product hypothetical protein 6019110 6018061 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05620 product CDS NADH:flavin oxidoreductases, Old Yellow Enzyme family:4074083 forward MW:37917 6020298 6019132 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05621 product CDS Putative sugar transport protein:4073012 forward MW:39803 6020645 6020331 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05622 product CDS Transcriptional regulator, ArsR family:4071813 forward MW:11738 6020810 6021409 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05623 product CDS Acyl carrier protein phosphodiesterase:4071334 reverse MW:22305 6022173 6021367 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05624 product CDS Phospholipid/glycerol acyltransferase precursor:4070777 forward MW:29485 6022928 6022173 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05625 product CDS Putative hemolysin:4069971 forward MW:28212 6023306 6024412 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05626 product CDS beta-lactamase:4068838 reverse MW:40667 6023306 6023377 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 6024409 6024747 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05627 product CDS: hypothetical protein 4067397:4067735 reverse MW:12542 6024828 6025409 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05628 product CDS: hypothetical protein 4066735:4067316 reverse MW:21152 6024828 6024893 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 6025411 6026568 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05629 product CDS cardiolipin synthase, putative:4066733 reverse MW:44470 6026673 6027158 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05630 product CDS: hypothetical protein 4064986:4065471 reverse MW:18635 6027724 6027290 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05631 product CDS: hypothetical protein 4064420:4064854 forward MW:16159 6028402 6028187 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05632 product CDS Putative cytoplasmic protein USSDB7A:4063957 forward MW:7446 6031328 6028668 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05633 product CDS Putative insecticidal toxin complex:4063476 forward MW:94866 6035655 6031321 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05634 product CDS Putative toxin subunit:4060823 forward MW:161772 6040528 6035675 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05635 product CDS: hypothetical protein 4051616:4056469 forward MW:180313 6043494 6040570 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05636 product CDS: hypothetical protein 4048629:4051574 forward MW:108840 6043753 6046557 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05637 product CDS Putative insecticidal toxin complex:4048391 reverse MW:103388 6048169 6046646 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05638 product CDS Fumarate hydratase class I, aerobic:4045498 forward MW:54882 6048349 6049287 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05639 product CDS 2-polyprenylphenol hydroxylase oxidoreductases:4043795 reverse MW:34305 6050820 6049369 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05640 product CDS Pyruvate kinase:4042775 forward MW:52046 6050997 6051398 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05641 product CDS lipoprotein, putative:4041147 reverse MW:15250 6050997 6051059 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 6051588 6051947 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05642 product CDS: hypothetical protein 4040197:4040556 reverse MW:13449 6053331 6051988 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05643 note CDS POSSIBLE CONSERVED MEMBRANE PROTEIN 4038813:4040156 forward MW:50425 product hypothetical protein 6054377 6053328 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05644 product CDS MoxR-like ATPases:4038816 forward MW:38265 6055594 6054374 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05645 product CDS: hypothetical protein 4036550:4037770 forward MW:46268 6057183 6055591 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05646 product CDS 5'-nucleotidase/2',3'-cyclic phosphodiesterase:4036553 forward MW:60243 6058150 6057170 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05647 product CDS Uncharacterized membrane protein:4034974 forward MW:35818 6058830 6058147 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05648 product CDS INTEGRAL MEMBRANE PROTEIN (Rhomboid family):4033997 forward MW:24825 6059061 6060491 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05649 product CDS Exodeoxyribonuclease I:4033083 reverse MW:54350 6060944 6060564 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05650 product CDS transcriptional regulator MvaT, P16 subunit:4031580 forward MW:14232 6061303 6062154 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05651 product CDS Formyltetrahydrofolate deformylase:4030841 reverse MW:32529 6062233 6062442 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05652 product CDS: hypothetical protein 4029702:4029911 reverse MW:7222 6063970 6062498 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05653 product CDS Low-affinity inorganic phosphate transporter:4029646 forward MW:52640 6064373 6064176 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05654 note CDS Conserved domain protein 4027771:4027968 forward MW:7749 product hypothetical protein 6065230 6066072 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05655 product CDS Pca regulon regulatory protein PcaR:4026914 reverse MW:30864 6066230 6067087 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05656 product CDS 3-oxoadipate CoA-transferase subunit A ; Glutaconate CoA-transferase subunit A (EC 2.8.3.12):4025935 reverse MW:31842 6067087 6067866 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05657 product CDS 3-oxoadipate CoA-transferase subunit B ; Glutaconate CoA-transferase subunit B (EC 2.8.3.12):4025057 reverse MW:27096 6067866 6069065 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05658 product CDS Beta-ketoadipyl CoA thiolase:4024281 reverse MW:41920 6069212 6070513 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05659 product CDS dicarboxylic acid transporter PcaT:4022932 reverse MW:47218 6072049 6070589 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05660 product CDS RND efflux system, outer membrane lipoprotein CmeC:4021555 forward MW:53299 6075180 6072046 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05661 product CDS RND efflux system, inner membrane transporter CmeB:4020098 forward MW:112359 6076344 6075184 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05662 product CDS RND efflux system, membrane fusion protein CmeA:4016960 forward MW:41022 6076344 6076255 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 30 product putative signal peptide 6076599 6077270 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05663 product CDS Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family:4015545 reverse MW:25534 6077549 6077752 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05664 product hypothetical protein 6077733 6078866 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05665 product CDS: hypothetical protein 4013278:4014342 reverse MW:40158 6080394 6078880 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05666 product CDS drug resistance transporter, EmrB/QacA family:4013264 forward MW:53044 6080674 6080504 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05667 product CDS: hypothetical protein 4011470:4011640 forward MW:6109 6080674 6080606 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 6080825 6081064 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05668 product CDS: hypothetical protein 4011080:4011319 reverse MW:8390 6081688 6081065 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05669 product CDS Flavin reductase-like, FMN-binding domain protein:4011079 forward MW:22567 6082189 6081827 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05670 note CDS Conserved domain protein precursor 4009955:4010317 forward MW:11956 product hypothetical protein 6082189 6082124 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 6084017 6082692 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05671 product CDS dicarboxylate MFS transporter:4009452 forward MW:48477 6085846 6084200 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05672 product CDS: hypothetical protein 4006325:4007944 forward MW:61738 6087537 6085843 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05673 product CDS Chaperone protein hscC (Hsc62):4006301 forward MW:63039 6090086 6087705 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05674 product CDS Sensory box histidine kinase/response regulator:4004439 forward MW:83910 6091646 6090312 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05675 product CDS C4-dicarboxylate transport transcriptional regulatory protein:4001832 forward MW:49532 6093410 6091653 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05676 product CDS C4-dicarboxylate transport sensor protein:4000491 forward MW:65181 6095778 6093481 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05677 product CDS Periplasmic beta-glucosidase:3998663 forward MW:83027 6095778 6095716 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 6096078 6096791 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05678 product CDS Beta-propeller domains of methanol dehydrogenase type:3996036 reverse MW:24355 6096078 6096149 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 6096826 6097443 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05679 product CDS: Hypothetical protein 3994701:3995318 reverse MW:22877 6098512 6097304 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05680 product CDS: hypothetical protein 208335:209348 reverse MW:37155 6099738 6098515 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05681 product CDS: hypothetical protein 3992406:3993629 forward MW:45456 6100036 6101256 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05682 product CDS Methyltransferase:3992108 reverse MW:45025 6101391 6102539 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05683 product CDS Alcohol dehydrogenase:3990753 reverse MW:39951 6102564 6103010 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05684 product CDS Acetyltransferase, GNAT family:3989580 reverse MW:16317 6103146 6104411 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05685 product CDS Pectin lyase precursor:3988998 reverse MW:44616 6103146 6103241 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 32 product putative signal peptide 6104540 6104400 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05686 product CDS: hypothetical protein 3987604:3987744 forward MW:5394 6105032 6104592 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05687 product CDS probable membrane protein 3987112:3987552 forward MW:16304 6105920 6105042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05688 product CDS Nickel and cobalt efflux transporter rcnA:3987102 forward MW:31560 6106221 6105928 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05689 product CDS NreA-like protein:3986216 forward MW:11037 6107587 6106415 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05690 product CDS major facilitator family transporter:3985729 forward MW:40986 6108691 6107765 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05691 product CDS: hypothetical protein 3983453:3984379 forward MW:33084 6108814 6109479 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05692 product CDS Transcriptional regulator, LysR family:3521170 reverse MW:33963 6110298 6109489 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05693 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 6111317 6110295 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05694 product CDS ISPsy4, transposase:6120546 reverse MW:37529 6111448 6111705 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05695 product CDS Transcriptional regulator:3506128 reverse MW:33218 6113222 6112437 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05696 product CDS probable short-chain dehydrogenase:4989841 forward MW:28190 6113347 6114009 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05697 product CDS Transcriptional regulator, TetR family:4988844 reverse MW:21326 6114587 6113955 CDS gene intS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:UniProtKB:P37326 locus_tag NYT1canu_05698 product Prophage integrase IntS 6115033 6114695 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05699 product hypothetical protein 6115347 6115274 tRNA inference COORDINATES:profile:Aragorn:1.2 locus_tag NYT1canu_05700 product tRNA-Gly(ccc) 6116390 6115506 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05701 product CDS (R)-3-hydroxydecanoyl-ACP:CoA transacylase PhaG (3-hydroxyacyl-CoA-acyl carrier protein transferase):4986772 forward MW:33065 6117379 6116687 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05702 product CDS Ribosomal small subunit pseudouridine synthase A:4985591 forward MW:26167 6121015 6117680 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05703 product CDS: hypothetical protein 4981299:4984598 forward MW:122021 6122940 6121126 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05704 product CDS Allophanate hydrolase:4981152 forward MW:64272 6126656 6122976 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05705 product CDS Urea carboxylase:4979302 forward MW:132506 6127383 6126766 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05706 product CDS Urea carboxylase-related aminomethyltransferase:4975512 forward MW:22764 6128120 6127395 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05707 product CDS Urea carboxylase-related aminomethyltransferase:4974883 forward MW:26639 6128899 6128117 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05708 product CDS Urea carboxylase-related ABC transporter, ATPase protein:4974161 forward MW:28912 6129711 6128896 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05709 product CDS Urea carboxylase-related ABC transporter, permease protein:4973382 forward MW:29803 6130806 6129739 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05710 product CDS Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein:4972539 forward MW:38166 6130806 6130732 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 25 product putative signal peptide 6130972 6130870 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05711 product ykkC-yxkD 6131379 6131837 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05712 product hypothetical protein 6132021 6132713 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05713 product CDS Uracil-DNA glycosylase, family 1:4970257 reverse MW:25697 6133766 6132732 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05714 product CDS Ammonia monooxygenase:4969546 forward MW:37022 6135273 6133759 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05715 product CDS Tricarboxylate transport membrane protein TctA:4968519 forward MW:53016 6135733 6135275 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05716 product CDS Tricarboxylate transport protein TctB:4967003 forward MW:16579 6136773 6135796 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05717 product CDS Tricarboxylate transport protein TctC:4966482 forward MW:35014 6136773 6136702 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 6137013 6136837 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05718 product hypothetical protein 6137272 6137943 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05719 product CDS Tricarboxylate transport transcriptional regulator TctD:4965165 reverse MW:30287 6137936 6139318 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05720 product CDS Tricarboxylate transport sensor protein TctE:4964342 reverse MW:50540 6140145 6139324 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05721 product CDS HD-GYP domain (HD superfamily hydrolase):4962954 forward MW:30220 6141200 6140259 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05722 product CDS Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress:4962019 forward MW:34099 6141353 6141607 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05723 product CDS YgfY 4960671:4960925 reverse MW:10328 6143640 6142024 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05724 product CDS L-aspartate oxidase:4960254 forward MW:59788 6144139 6144720 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05725 product CDS RNA polymerase sigma-H factor AlgT:4958139 reverse MW:22194 6144754 6145344 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05726 product CDS Sigma factor RpoE negative regulatory protein RseA:4957524 reverse MW:20754 6145353 6146309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05727 product CDS Sigma factor RpoE negative regulatory protein RseB precursor:4956925 reverse MW:34507 6145353 6145418 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 22 product putative signal peptide 6146464 6146207 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05728 product hypothetical protein 6146595 6148034 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05729 product CDS HtrA protease/chaperone protein:4955684 reverse MW:50387 6146595 6146678 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 28 product putative signal peptide 6148206 6150002 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05730 product CDS Translation elongation factor LepA:4954073 reverse MW:66143 6150012 6150866 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05731 product CDS Signal peptidase I:4952267 reverse MW:32058 6150983 6151360 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05732 product CDS: hypothetical protein 4950919:4951260 reverse MW:12955 6151357 6152046 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05733 product CDS Ribonuclease III:4950922 reverse MW:25542 6152039 6152941 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05734 product CDS GTP-binding protein Era:4950240 reverse MW:33878 6153002 6153685 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05735 product CDS DNA recombination and repair protein RecO:4949277 reverse MW:24930 6153748 6154488 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05736 product CDS Pyridoxine 5'-phosphate synthase:4948531 reverse MW:26567 6155456 6154497 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05737 product CDS tRNA (5-methoxyuridine) 34 synthase:4947782 forward MW:36134 6156196 6155453 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05738 product CDS tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase:4946826 forward MW:27383 6156689 6156297 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05739 product CDS lipoprotein, putative:4945982 forward MW:14089 6156689 6156630 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 6159312 6156895 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05740 product CDS ATP-dependent protease La Type I:4945384 forward MW:89384 6159536 6160165 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05741 product CDS Protein containing plastocyanin/azurin family domain:4942785 reverse MW:24012 6160162 6162516 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05742 product CDS diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s):4942117 reverse MW:85515 6162520 6163395 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05743 product CDS Hypothetical protein in Cyanoglobin locus:4939759 reverse MW:31349 6163395 6163817 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05744 product CDS Cyanoglobin; Hemoglobin-like protein HbN:4938884 reverse MW:15565 6163395 6163448 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 18 product putative signal peptide 6165238 6164159 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05745 product CDS transcriptional regulator, GntR family:4938120 forward MW:40414 6165498 6166871 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05746 product CDS Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit:4936781 reverse MW:48193 6166982 6167863 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05747 product CDS Putative polysaccharide deacetylase:4935297 reverse MW:33863 6167891 6169231 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05748 product CDS Putative sugar transporter:4934388 reverse MW:47635 6169242 6170003 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05749 product CDS 3-oxoacyl-[acyl-carrier protein] reductase:4933037 reverse MW:26364 6169242 6169304 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 21 product putative signal peptide 6170035 6170784 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05750 product CDS Oxidoreductase, short chain dehydrogenase/reductase family:4932244 reverse MW:25728 6170807 6171106 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05751 product CDS: hypothetical protein 4931173:4931472 reverse MW:11130 6171103 6172110 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05752 product CDS Putative metal chaperone, involved in Zn homeostasis, GTPase of family 4930169:4931176 reverse MW:36676 6172107 6173303 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05753 product CDS ABC transporter, binding protein:4930172 reverse MW:44495 6176490 6174073 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05754 product CDS Glucose dehydrogenase, PQQ-dependent:4631270 reverse MW:86761 6176934 6177161 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05755 product CDS: hypothetical protein 4631666:4631941 forward MW:10640 6177232 6177891 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05756 product CDS Integral membrane protein:4632671 forward MW:24480 6178680 6177913 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05757 product CDS iron-chelator utilization protein:4633460 reverse MW:28704 6179267 6178677 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05758 product CDS Transcriptional regulator, PadR family:4634056 reverse MW:22165 6182474 6179355 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05759 product CDS Membrane carboxypeptidase (penicillin-binding protein):4637254 reverse MW:116113 6182646 6182449 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05760 product hypothetical protein 6182835 6183740 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05761 product CDS: hypothetical protein 4637615:4638520 forward MW:34280 6182835 6182915 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 6184482 6183793 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05762 product CDS: hypothetical protein 4638573:4639115 reverse MW:20564 6185375 6184662 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05763 product CDS: hypothetical protein 4639442:4640155 reverse MW:27647 6185593 6186246 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05764 product CDS: hypothetical protein 4640373:4641026 forward MW:24244 6185593 6185679 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 29 product putative signal peptide 6186228 6186527 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05765 product CDS: hypothetical protein 4637615:4638520 forward MW:34280 6187241 6186573 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05766 product CDS: hypothetical protein 4641353:4642021 reverse MW:25265 6188467 6187337 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05767 product CDS OpgC protein:4643247 reverse MW:42047 6188762 6189043 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05768 product CDS LSU ribosomal protein L31p:4643823 forward MW:10206 6189195 6190286 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05769 product CDS D-alanine--D-alanine ligase:4645066 forward MW:38869 6190283 6190693 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05770 product CDS Nudix hydrolase family protein 4645063:4645473 forward MW:14753 6191664 6190747 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05771 product CDS Transcriptional activator MetR:4646444 reverse MW:34142 6191771 6194071 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05772 product CDS 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase:4648851 forward MW:85993 6194257 6195249 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05773 product CDS hydrolase, alpha/beta fold family:4650029 forward MW:38469 6194257 6194313 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 6195303 6195950 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05774 product CDS 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain:4650730 forward MW:24109 6197514 6196186 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05775 product CDS Sigma-54 dependent DNA-binding response regulator:4652294 reverse MW:48876 6199456 6197525 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05776 product CDS Signal transduction histidine kinase regulating C4-dicarboxylate transport system:4654236 reverse MW:71338 6200249 6199515 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05777 product CDS Glutamate Aspartate transport ATP-binding protein GltL (TC 3.A.1.3.4):4655029 reverse MW:26877 6200911 6200246 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05778 product CDS Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4):4655691 reverse MW:24197 6201657 6200911 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05779 product CDS Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4):4656437 reverse MW:27618 6202714 6201788 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05780 product CDS Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4):4657494 reverse MW:33449 6202714 6202643 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 24 product putative signal peptide 6204607 6203069 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05781 product CDS Aerobic glycerol-3-phosphate dehydrogenase:4659387 reverse MW:57114 6205826 6205071 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05782 product CDS Glycerol-3-phosphate regulon repressor, DeoR family:4660606 reverse MW:27708 6207442 6205937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05783 product CDS Glycerol kinase:4662222 reverse MW:55835 6208329 6207472 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05784 product CDS Glycerol uptake facilitator protein:4663109 reverse MW:29922 6208681 6209151 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05785 product CDS YbaK family protein:4663931 forward MW:16722 6210230 6209160 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05786 product CDS Ferric iron ABC transporter, ATP-binding protein:4665001 reverse MW:38609 6211147 6210227 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05787 product CDS Ornithine carbamoyltransferase:4665927 reverse MW:34078 6211425 6211318 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05788 product hypothetical protein 6211597 6211890 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05789 product CDS: hypothetical protein 4666461:4666670 forward MW:7838 6212023 6214143 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05790 product CDS Formate dehydrogenase-O, major subunit:4668923 forward MW:77568 6214232 6214558 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05791 product CDS Glutaredoxin-related protein:4669338 forward MW:11692 6215116 6214646 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05792 product CDS Bacterioferritin:4669896 reverse MW:17833 6216397 6215720 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05793 product CDS Ribonuclease T:4671177 reverse MW:24568 6217437 6216394 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05794 product CDS Dihydroorotase:4672151 reverse MW:35639 6217586 6218491 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05795 product CDS Sodium-type flagellar protein motY precursor:4673271 forward MW:33198 6217586 6217645 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 6218612 6219829 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05796 product CDS Argininosuccinate synthase:4674609 forward MW:45412 6221053 6220526 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05797 product CDS: hypothetical protein 4675306:4675833 reverse MW:19108 6222345 6222971 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05798 product CDS DNA-binding response regulator, LuxR family:4677751 forward MW:22960 6223263 6223081 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05799 product CDS Leucyl-tRNA synthetase:4678043 reverse MW:6845 6224008 6223370 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05800 product CDS Endonuclease III:4678788 reverse MW:23808 6224880 6224005 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05801 product CDS Electron transport complex protein RnfB:4679660 reverse MW:31427 6227059 6225011 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05802 product CDS Methionyl-tRNA synthetase:4681839 reverse MW:75609 6227246 6228340 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05803 product CDS Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like:4683120 forward MW:38488 6228817 6228431 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05804 product cspA 6228690 6228481 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05805 product CDS Cold shock protein CspA:4683470 reverse MW:7726 6229010 6229576 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05806 product CDS Deoxycytidine triphosphate deaminase:4684356 forward MW:21247 6229689 6229907 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05807 product CDS: hypothetical protein 4684544:4684687 forward MW:4680 6230645 6229989 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05808 product CDS hypothetical protein:4685425 reverse MW:24237 6233134 6230642 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05809 product CDS: Helicase domain protein 4685422:4687914 reverse MW:91898 6234267 6233503 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05810 product CDS Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1):4689047 reverse MW:28114 6235395 6234277 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05811 product CDS Succinylglutamate desuccinylase/aspartoacylase:4690175 reverse MW:40596 6236118 6235408 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05812 product CDS Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1):4690898 reverse MW:26706 6236843 6236115 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05813 product CDS Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1):4691659 reverse MW:27928 6237707 6236925 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05814 product CDS Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1):4692487 reverse MW:27900 6237707 6237639 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 6239766 6238051 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05815 product CDS ATP-dependent DNA ligase LigC:4694546 reverse MW:64128 6240809 6239763 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05816 product CDS mRNA 3-end processing factor:4695589 reverse MW:38278 6243688 6241214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05817 product CDS Protein related to penicillin acylase:4698468 reverse MW:89971 6243688 6243608 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 6244242 6244042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05818 product CDS Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1):15707 reverse MW:103431 6244418 6245071 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05819 product CDS: Putative cI prophage repressor protein 4699198:4699851 forward MW:23753 6245199 6245450 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05820 product CDS: hypothetical protein 4699979:4700230 forward MW:9695 6245713 6246042 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05821 product CDS Permeases of the major facilitator superfamily:4700822 forward MW:11627 6246557 6246063 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05822 note CDS Conserved secreted protein 4700843:4701337 reverse MW:19043 product hypothetical protein 6246629 6247222 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05823 product CDS: hypothetical protein 4701451:4702002 forward MW:19779 6247335 6249770 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05824 product CDS Ferrichrome-iron receptor:4704550 forward MW:87690 6249975 6250490 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05825 product CDS ISPsy8, transposase OrfA:6129910 forward MW:19998 6250730 6251326 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05826 product CDS Transposase:6130746 forward MW:30021 6251857 6251384 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05827 product CDS GTG start codon:5229825 reverse MW:17169 6252358 6251861 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05828 product CDS: hypothetical protein 5229829:5230326 reverse MW:18595 6252576 6252851 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05829 product CDS: hypothetical protein 5230577:5230819 forward MW:8975 6252844 6253602 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05830 product CDS Collagen pro alpha-chain precursor:5231570 forward MW:25297 6252844 6252897 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 18 product putative signal peptide 6254712 6253681 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05831 product CDS Purine nucleoside permease:5232680 reverse MW:37666 6254712 6254644 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 6255698 6254739 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05832 product CDS Outer membrane protein OmpK:5233666 reverse MW:35440 6255698 6255594 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 35 product putative signal peptide 6256385 6255921 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05833 product CDS Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase:5234353 reverse MW:17044 6256493 6258637 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05834 product CDS ATP-dependent helicase DinG/Rad3:5236605 forward MW:78845 6258748 6259896 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05835 product CDS Esterase A:5237864 forward MW:41187 6260050 6261192 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05836 product CDS OmpA family protein:5239160 forward MW:33701 6261220 6261378 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05837 product hypothetical protein 6261466 6262113 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05838 product CDS Pyridoxamine 5'-phosphate oxidase:5240081 forward MW:24935 6262261 6262725 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05839 product CDS Outer membrane lipoprotein:5240693 forward MW:15784 6262261 6262308 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 16 product putative signal peptide 6264781 6263168 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05840 product CDS NAD(FAD)-utilizing dehydrogenase, 5241136:5242749 reverse MW:58333 6265558 6264878 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05841 product CDS lipoprotein, putative:5243526 reverse MW:24613 6265558 6265478 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 6266544 6265843 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05842 product CDS Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1):5244512 reverse MW:25723 6267312 6266545 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05843 product CDS Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1):5245280 reverse MW:28066 6268574 6267309 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05844 product CDS Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1):5246542 reverse MW:46147 6269494 6268571 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05845 product CDS High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1):5247453 reverse MW:31904 6270844 6269720 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05846 product CDS branched-chain amino acid transport protein BraC:5248803 reverse MW:39532 6270844 6270764 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 27 product putative signal peptide 6271172 6271477 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05847 product CDS: hypothetical protein 5249131:5249436 forward MW:11018 6273891 6271600 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05848 product CDS Sensory box/GGDEF family protein:5251850 reverse MW:84552 6274125 6275534 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05849 product CDS Major facilitator family transporter:5253493 forward MW:50956 6278484 6275638 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05850 product CDS RNA polymerase associated protein RapA:5256443 reverse MW:106626 6278715 6279056 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05851 product CDS Aspartate-semialdehyde dehydrogenase:5257015 forward MW:12688 6279145 6279300 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05852 product CDS: hypothetical protein 5257104:5257259 forward MW:5958 6279414 6279557 misc_RNA inference COORDINATES:profile:Infernal:1.1 locus_tag NYT1canu_05853 product PhrS 6280076 6279579 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05854 product CDS type III helper protein HopPmaH(Pto):5258959 reverse MW:50184 6280833 6280087 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05855 product CDS type III helper protein HopPmaH(Pto):5258959 reverse MW:50184 >Feature tig00000195 454 215 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05856 product CDS DNA-binding protein HU form N:605536 reverse MW:9801 1953 430 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05857 product CDS major replication protein:5610790 reverse MW:48473 2579 2352 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05858 product hypothetical protein 3086 2658 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05859 product CDS Transcriptional regulator, GntR family:5611932 reverse MW:16463 3837 3274 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05860 product CDS hypothetical protein:5612674 reverse MW:21791 4280 3858 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05861 product CDS: hypothetical protein 5612695:5613072 reverse MW:14293 4886 4308 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05862 product CDS: hypothetical protein 5613145:5615433 reverse MW:84895 6595 4883 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05863 product CDS: hypothetical protein 5613145:5615433 reverse MW:84895 7666 6803 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05864 product CDS trbB protein, putative:5616505 reverse MW:39542 7759 7959 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05865 product CDS: hypothetical protein 5616598:5616798 forward MW:7445 7956 8333 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05866 product CDS PIN domain protein:5617172 forward MW:13623 9477 8323 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05867 product CDS trbA protein:5618364 reverse MW:44589 10265 9618 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05868 product CDS exclusion-determining protein, putative:5619104 reverse MW:25019 12455 10314 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05869 product CDS IncI1 plasmid conjugative transfer integral membrane protein TraY:5621294 reverse MW:75619 12455 12387 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 13086 12484 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05870 product CDS traX protein:5621895 reverse MW:21117 14290 13076 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05871 product CDS IncI1 plasmid conjugative transfer protein TraW:5623129 reverse MW:42549 14290 14222 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 14569 14333 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05872 product CDS: hypothetical protein 5623172:5623408 reverse MW:8747 17649 14593 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05873 product CDS IncI1 plasmid conjugative transfer protein TraU:5626488 reverse MW:113066 18235 17624 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05874 product CDS IncI1 plasmid conjugative transfer protein TraT:5627074 reverse MW:22044 18711 18316 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05875 product CDS IncI1 plasmid conjugative transfer protein TraR:5627550 reverse MW:13249 19329 18787 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05876 product CDS IncI1 plasmid conjugative transfer protein TraQ:5628168 reverse MW:18566 20048 19338 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05877 product CDS IncI1 plasmid conjugative transfer protein TraP:5628887 reverse MW:25548 21403 20045 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05878 product CDS IncI1 plasmid conjugative transfer protein TraO:5630242 reverse MW:47876 22467 21409 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05879 product CDS IncI1 plasmid conjugative transfer protein TraN:5631306 reverse MW:36756 22467 22408 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 20 product putative signal peptide 23228 22524 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05880 product CDS IncI1 plasmid conjugative transfer protein TraM:5632070 reverse MW:26261 23578 23225 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05881 product CDS IncI1 plasmid conjugative transfer protein TraL:5632420 reverse MW:12430 23578 23486 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 31 product putative signal peptide 28394 23604 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05882 product CDS: hypothetical protein 5632446:5637071 reverse MW:164965 28679 28398 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05883 product CDS traK protein:5637401 reverse MW:11449 28953 28708 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05884 product CDS: hypothetical protein 5637430:5637675 reverse MW:9016 29574 28990 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05885 product CDS endonuclease:5638209 reverse MW:18130 29815 29567 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05886 product CDS hypothetical protein:5638713 reverse MW:8969 30086 29853 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05887 product CDS hypothetical protein:5638918 reverse MW:6439 31399 30218 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05888 product CDS IncI1 plasmid conjugative transfer protein TraJ, related to pilus biogenesis/retracton protein:5640194 reverse MW:43991 32196 31396 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05889 product CDS IncI1 plasmid conjugative transfer protein TraI:5640760 reverse MW:21493 32666 32193 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05890 product CDS IncI1 plasmid conjugative transfer protein TraH:5641461 reverse MW:16892 32666 32598 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 33194 32703 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05891 product CDS IncI1 plasmid conjugative transfer putative membrane protein PilT:5641893 reverse MW:14545 33194 33138 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 19 product putative signal peptide 33469 33197 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05892 product hypothetical protein 33469 33392 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 26 product putative signal peptide 33696 33487 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05893 product CDS hypothetical protein:5925022 reverse MW:7766 34318 33785 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05894 product CDS transcription antiterminator:5925623 reverse MW:19022 34562 34918 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05895 product hypothetical protein 35113 34937 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05896 product CDS hypothetical protein:5926439 reverse MW:6987 36655 35324 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05897 product CDS Permeases of the major facilitator superfamily:5927981 reverse MW:47569 36961 37827 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05898 product CDS transcriptional regulator, LysR family:5929153 forward MW:32857 38861 38334 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05899 product hypothetical protein 39386 38886 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05900 product CDS Uncharacterized protein ImpD:5930712 reverse MW:17791 39520 40203 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05901 product CDS hypothetical protein:5931529 forward MW:25166 42183 40228 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05902 product CDS relaxase/mobilization nuclease MobA, putative:5933509 reverse MW:75081 42523 42194 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05903 product CDS mobilization protein MobB, putative:5933849 reverse MW:12156 42968 43246 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05904 product CDS mobilization protein MobC, putative:5934572 forward MW:10074 43508 43320 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05905 product hypothetical protein 44402 43725 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05906 product CDS: hypothetical protein 5935051:5935728 reverse MW:25574 44826 44449 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05907 product CDS: hypothetical protein 5935775:5936152 reverse MW:14561 45233 46255 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05908 product CDS ISPsy4, transposase:6120546 reverse MW:37529 46252 47061 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05909 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 47979 48599 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05910 product CDS resolvase, putative:5937957 forward MW:23114 48921 48625 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05911 product CDS hypothetical protein:5938096 reverse MW:4387 49153 48932 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05912 product CDS: hypothetical protein 5938290:5938511 reverse MW:7915 49391 49191 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05913 product CDS C4-type zinc finger protein, DksA/TraR family:5938749 reverse MW:7313 49786 50469 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05914 product CDS ATPases involved in chromosome partitioning:5939827 forward MW:22396 50469 50750 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05915 product hypothetical protein 52099 50849 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05916 product CDS putative transposase:5941457 reverse MW:46763 52484 53173 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05917 product hypothetical protein 53938 53174 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05918 product CDS transposase:6139840 reverse MW:8915 54479 54345 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05919 product hypothetical protein 55375 54566 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05920 product CDS ISPsy4, transposition helper protein:6119548 reverse MW:29732 56394 55372 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05921 product CDS ISPsy4, transposase:6120546 reverse MW:37529 56798 56676 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05922 product hypothetical protein 56983 56765 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05923 product CDS Resolvase:6122547 forward MW:19625 57705 57202 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05924 product CDS hypothetical protein:6143866 forward MW:11291 57898 58152 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05925 product CDS hypothetical protein:6062907 reverse MW:7431 58155 59069 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05926 product CDS hypothetical protein:6062710 reverse MW:34517 60059 59130 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05927 product CDS: hypothetical protein 6060806:6061735 forward MW:33692 61207 60059 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05928 product CDS DNA-cytosine methyltransferase:6060806 forward MW:41683 61583 61984 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05929 product CDS putative TnpA repressor protein:6059243 reverse MW:13244 61987 62214 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05930 product CDS hypothetical protein:6058878 reverse MW:8360 62934 62290 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05931 product CDS stability/partitioning determinant:6058575 forward MW:18841 63239 63646 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05932 product CDS ISPsy21, transposase orfB:6073687 forward MW:15154 63776 65119 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05933 product CDS candidate type III effector HolPtoQ:6075160 forward MW:48881 67040 65235 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05934 product CDS: hypothetical protein 6075276:6076496 reverse MW:43034 68086 67850 CDS gene csrA_2 inference ab initio prediction:Prodigal:2.6 inference protein motif:HAMAP:MF_00167 locus_tag NYT1canu_05935 product Carbon storage regulator 68870 68292 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05936 product CDS hypothetical protein:6025252 reverse MW:14058 69526 68870 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05937 product CDS SanC, putative:6025839 reverse MW:14042 70822 69563 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05938 product CDS Adenosylmethionine-8-amino-7-oxononanoate aminotransferase:6027420 reverse MW:45389 71840 70806 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05939 product CDS: hypothetical protein 6027404:6028438 reverse MW:39193 72778 71858 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05940 product CDS: hypothetical protein 6028456:6029376 reverse MW:33653 73571 72924 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05941 product CDS Alpha-ribazole-5'-phosphate phosphatase:5970545 forward MW:20761 74848 73913 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05942 product CDS AvrD protein:6031446 reverse MW:34388 75755 75123 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05943 product CDS stability/partitioning determinant:6058575 forward MW:18841 76215 75796 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05944 product CDS Plasmid stability protein stbB:6121979 forward MW:15156 76523 76212 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05945 product CDS Plasmid stability protein stbC:6121563 forward MW:4348 77184 77687 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05946 product CDS hypothetical protein:6143866 forward MW:11291 77708 78739 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05947 product CDS transposase:6139840 reverse MW:8915 80454 79756 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05948 product CDS Acetyltransferase, GNAT family:2615679 forward MW:30009 80982 80695 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05949 product CDS DNA-binding protein HU-beta:6117057 forward MW:9860 81193 81474 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05950 product hypothetical protein 81476 82684 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05951 product CDS Transposase:6127383 reverse MW:45840 84299 82986 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05952 product CDS major replication protein:5610790 reverse MW:48473 84925 84698 CDS inference ab initio prediction:Prodigal:2.6 locus_tag NYT1canu_05953 product hypothetical protein 85432 85004 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05954 product CDS Transcriptional regulator, GntR family:5611932 reverse MW:16463 86183 85620 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05955 product CDS hypothetical protein:5612674 reverse MW:21791 86626 86204 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05956 product CDS: hypothetical protein 5612695:5613072 reverse MW:14293 88942 86654 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05957 product CDS: hypothetical protein 5613145:5615433 reverse MW:84895 90014 88929 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05958 product CDS trbB protein, putative:5616505 reverse MW:39542 90107 90307 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05959 product CDS: hypothetical protein 5616598:5616798 forward MW:7445 90304 90681 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05960 product CDS PIN domain protein:5617172 forward MW:13623 91825 90671 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05961 product CDS trbA protein:5618364 reverse MW:44589 92451 91966 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05962 product CDS exclusion-determining protein, putative:5619104 reverse MW:25019 92612 92427 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05963 product CDS exclusion-determining protein, putative:5619104 reverse MW:25019 93032 92661 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05964 product CDS IncI1 plasmid conjugative transfer integral membrane protein TraY:5621294 reverse MW:75619 93739 93458 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05965 product CDS IncI1 plasmid conjugative transfer integral membrane protein TraY:5621294 reverse MW:75619 94205 93756 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05966 product CDS IncI1 plasmid conjugative transfer integral membrane protein TraY:5621294 reverse MW:75619 94395 94174 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05967 product CDS IncI1 plasmid conjugative transfer integral membrane protein TraY:5621294 reverse MW:75619 94798 94343 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05968 product CDS IncI1 plasmid conjugative transfer integral membrane protein TraY:5621294 reverse MW:75619 94798 94730 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide 95429 94827 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05969 product CDS traX protein:5621895 reverse MW:21117 96149 95448 CDS inference ab initio prediction:Prodigal:2.6 inference similar to AA sequence:T1-RAST-proteins.faa:CDS locus_tag NYT1canu_05970 product CDS IncI1 plasmid conjugative transfer protein TraW:5623129 reverse MW:42549 96149 96081 sig_peptide inference ab initio prediction:SignalP:4.1 note predicted cleavage at residue 23 product putative signal peptide