0000000000000000000000000000000000000000 fa2196202db001a4a744ac0a83f7ac5be37658e6 Thomas Fisher-York <tly2@cornell.edu> 1353017734 -0500	clone: from https://github.com/tomfy/Orthologger
fa2196202db001a4a744ac0a83f7ac5be37658e6 226e3af5a1531089b7329f88253a71b84970e192 Thomas Fisher-York <tly2@cornell.edu> 1353349854 -0500	pull: Fast-forward
226e3af5a1531089b7329f88253a71b84970e192 d4a51de0f2e29808cdeb00c9318b513074f11bbd Thomas Fisher-York <tly2@cornell.edu> 1354567934 -0500	commit: Files with a few ids for testing
d4a51de0f2e29808cdeb00c9318b513074f11bbd b8a1f56c55ee5530047d138c08ce559ee7a6dcc4 Thomas Fisher-York <tly2@cornell.edu> 1354735734 -0500	commit: Urec directory and contents, needed for mindl rerooting.
b8a1f56c55ee5530047d138c08ce559ee7a6dcc4 80a035fc0f3cad54c3ea8efb0f81060212b66e00 Thomas Fisher-York <tly2@cornell.edu> 1354735800 -0500	commit: Files to delete.
80a035fc0f3cad54c3ea8efb0f81060212b66e00 3f30e2b964d7dff9549297d0750db96a402e05d8 Thomas Fisher-York <tly2@cornell.edu> 1354735835 -0500	commit: Deleted.
3f30e2b964d7dff9549297d0750db96a402e05d8 8d9edfc2975bff7bbba6b1dd8005643f547d0d26 Thomas Fisher-York <tly2@cornell.edu> 1354735923 -0500	commit: Changes in default input files.
8d9edfc2975bff7bbba6b1dd8005643f547d0d26 6bf34983d15ba33feb2abff884e365bade1c8c75 Thomas Fisher-York <tly2@cornell.edu> 1354735966 -0500	commit: New, bigger, default species tree.
6bf34983d15ba33feb2abff884e365bade1c8c75 19766eb4867dd939a0744144258492b9ff5b42a4 Thomas Fisher-York <tly2@cornell.edu> 1354736185 -0500	commit: Bigger default species tree.
19766eb4867dd939a0744144258492b9ff5b42a4 4e6c06657f7a0ce6da51a1f4ec351581c2b3b7ce Thomas Fisher-York <tly2@cornell.edu> 1354818252 -0500	commit: small cluster file and corresponding fasta for testing.
4e6c06657f7a0ce6da51a1f4ec351581c2b3b7ce 1d737c572b73ef83ec8217a4b3b83c8deacb25ea Thomas Fisher-York <tly2@cornell.edu> 1354823044 -0500	commit: Totally new README file for scripts in Orthologger
1d737c572b73ef83ec8217a4b3b83c8deacb25ea 65f26ec4ac2ae4380351f85da8299269b295e88b Thomas Fisher-York <tly2@cornell.edu> 1354823156 -0500	commit: Improved usage help when invoked with no arguments.
65f26ec4ac2ae4380351f85da8299269b295e88b 3c64b19e3cd5e0d3c2d24cfe9c4ad4abe9ee7d28 Thomas Fisher-York <tly2@cornell.edu> 1354823234 -0500	commit: Changed default input filenames
3c64b19e3cd5e0d3c2d24cfe9c4ad4abe9ee7d28 8683bf2613b3ed433073bfe7ad42c6d32ae4e503 Thomas Fisher-York <tly2@cornell.edu> 1354910164 -0500	commit: Added a bit more.
8683bf2613b3ed433073bfe7ad42c6d32ae4e503 664bf36f689a207a8cc6181c144a6b7101089b03 Thomas Fisher-York <tly2@cornell.edu> 1354913269 -0500	commit: Initial commit.
664bf36f689a207a8cc6181c144a6b7101089b03 f58b69be9dc1bdfcf2e6b7af47b0bf80f7effe88 Thomas Fisher-York <tly2@cornell.edu> 1354913337 -0500	commit: Added comment.
