2009 2009

1 publication

A Snapshot of the Emerging Tomato Genome Sequence

Author(s): Lukas A Mueller, René Klein Lankhorst, Steven D Tanksley, James J Giovannoni, Ruth White, Julia Vrebalov, Zhangjun Fei, Joyce van Eck, Robert Buels, Adri A Mills, Naama Menda, Isaak Y Tecle, Aureliano Bombarely, Stephen Stack, Suzanne M Royer, Song-Bin Chang, Lindsay A Shearer, Byung Dong Kim, Sung-Hwan Jo, Hur Cheol-Goo, Doil Choi, Chang-Bao Li, Jiuhai Zhao, Hongling Jiang, Yu Geng, Yuanyuan Dai, Huajie Fan, Jinfeng Chen, Fei Lu, Jinfeng Shi, Shouhong Sun, Jianjun Chen, Xiaohua Yang, Chen Lu, Mingsheng Chen, Zhukuan Cheng, Chuanyou Li, Hongqing Ling, Yongbiao Xue, Ying Wang, Graham B Seymour, Gerard J ishop, Glenn Bryan, Jane Rogers, Sarah Sims, Sarah Butcher, Daniel Buchan, James Abbott, Helen Beasley, Christine Nicholson, Clare Riddle, Sean Humphray, Karen McLaren, Saloni Mathur, Shailendra Vyas, Amolkumar U Solanke, Rahul Kumar, Vikrant Gupta, Arun K Sharma, Paramjit Khurana, Jitendra P Khurana, Akhilesh Tyagi, Sarita, Parul Chowdhury, Smriti Shridhar, Debasis Chattopadhyay, Awadhesh Pandit, Pradeep Singh, Ajay Kumar, Rekha Dixit, Archana Singh, Sumera Praveen, Vivek Dalal, Mahavir Yadav, Irfan Ahmad Ghazi, Kishor Gaikwad, Tilak Raj Sharma, Trilochan Mohapatra, Nagendra Kumar Singh, Dóra Szinay, Hans de Jong, Sander Peters, Marjo van Staveren, Erwin Datema, Mark WEJ Fiers, Roeland CHJ van Ham, P Lindhout, Murielle Philippot, Pierre Frasse, Farid Regad, Mohamed Zouine, Mondher Bouzayen, Erika Asamizu, Shusei Sato, Hiroyuki Fukuoka, Satoshi Tabata, Daisuke Shibata, Miguel A Botella, M Perez-Alonso, V Fernandez-Pedrosa, Sonia Osorio, Amparo Mico, Antonio Granell, Zhonghua Zhang, Jun He, Sanwen Huang, Yongchen Du, Dongyu Qu, Longfei Liu, Dongyuan Liu, Jun Wang, Zhibiao Ye, Wencai Yang, Guoping Wang, Alessandro Vezzi, Sara Todesco, Giorgio Valle, Giulia Falcone, Marco Pietrella, Giovanni Giuliano, Silvana Grandillo, Alessandra Traini, Nunzio D'Agostino, Maria Luisa Chiusano, Mara Ercolano, Amalia Barone, Luigi Frusciante, Heiko Schoof, Anika Jöcker, Rémy Bruggmann, Manuel Spannagl, Klaus XF Mayer, Roderic Guigó, Francisco Camara, Stephane Rombauts, Jeffrey A Fawcett, Yves Van de Peer, Sandra Knapp, Dani Zamir, Willem Stiekema show fewer show all Journal: The Plant Genome Volume: 2 Pages: 78-92

2008 2008

2 publications

PABS: an online platform to assist BAC-by-BAC sequencing projects.

Author(s): S Todesco, D Campagna, F Levorin, M D'Angelo, R Schiavon, G Valle, A Vezzi Journal: BioTechniques Volume: 44 Issue: 1 Pages: 60, 62, 64 Pubmed: Pubmed ID 18254380

Structural and functional genomics of tomato.

Author(s): A Barone, ML Chiusano, MR Ercolano, G Giuliano, S Grandillo, L Frusciante Journal: International journal of plant genomics Volume: 2008 Pages: 820274 Pubmed: Pubmed ID 18317508

2007 2007

2 publications

Predicting and testing physical locations of genetically mapped loci on tomato pachytene chromosome 1.

Author(s): SB Chang, LK Anderson, JD Sherman, SM Royer, SM Stack Journal: Genetics Volume: 176 Issue: 4 Pages: 2131-8 Pubmed: Pubmed ID 17565940

Estimation of nuclear DNA content of plants by flow cytometry

Author(s): K Arumuganathan, E Earle Journal: Plant Molecular Biology Reporter Volume: 9 Pages: 208-218

2006 2006

3 publications

Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.

Author(s): S Kahlau, S Aspinall, JC Gray, R Bock Journal: Journal of molecular evolution Volume: 63 Issue: 2 Pages: 194-207 Pubmed: Pubmed ID 16830097

TOPAAS, a tomato and potato assembly assistance system for selection and finishing of bacterial artificial chromosomes.

Author(s): SA Peters, JC van Haarst, TP Jesse, D Woltinge, K Jansen, T Hesselink, MJ van Staveren, MH Abma-Henkens, RM Klein-Lankhorst Journal: Plant physiology Volume: 140 Issue: 3 Pages: 805-17 Pubmed: Pubmed ID 16524981

Euchromatin and pericentromeric heterochromatin: comparative composition in the tomato genome.

Author(s): Y Wang, X Tang, Z Cheng, L Mueller, J Giovannoni, SD Tanksley Journal: Genetics Volume: 172 Issue: 4 Pages: 2529-40 Pubmed: Pubmed ID 16489216

2005 2005

2 publications

Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.

Author(s): Y Wang, RS van der Hoeven, R Nielsen, LA Mueller, SD Tanksley Journal: TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik Volume: 112 Issue: 1 Pages: 72-84 Pubmed: Pubmed ID 16208505

The SOL Genomics Network: a comparative resource for Solanaceae biology and beyond.

Author(s): LA Mueller, TH Solow, N Taylor, B Skwarecki, R Buels, J Binns, C Lin, MH Wright, R Ahrens, Y Wang, EV Herbst, ER Keyder, N Menda, D Zamir, SD Tanksley show fewer show all Journal: Plant physiology Volume: 138 Issue: 3 Pages: 1310-7 Pubmed: Pubmed ID 16010005

2000 2000

1 publication

A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing.

Author(s): MA Budiman, L Mao, TC Wood, RA Wing Journal: Genome research Volume: 10 Issue: 1 Pages: 129-36 Pubmed: Pubmed ID 10645957

1999 1999

2 publications

Long tomato microsatellites are predominantly associated with centromeric regions.

Author(s): T Areshchenkova, MW Ganal Journal: Genome / National Research Council Canada = Génome / Conseil national de recherches Canada Volume: 42 Issue: 3 Pages: 536-44 Pubmed: Pubmed ID 10382301

Localization of single- and low-copy sequences on tomato synaptonemal complex spreads using fluorescence in situ hybridization (FISH).

Author(s): DG Peterson, NL Lapitan, SM Stack Journal: Genetics Volume: 152 Issue: 1 Pages: 427-39 Pubmed: Pubmed ID 10224272

1996 1996

3 publications

DNA content of heterochromatin and euchromatin in tomato (Lycopersicon esculentum) pachytene chromosomes.

Author(s): DG Peterson, SM Stack, HJ Price, JS Johnston Journal: Genome / National Research Council Canada = Génome / Conseil national de recherches Canada Volume: 39 Issue: 1 Pages: 77-82 Pubmed: Pubmed ID 18469880

High resolution physical mapping of 45S (5.8S, 18S and 25S) rDNA gene loci in the tomato genome using a combination of karyotyping and FISH of pachytene chromosomes.

Author(s): J Xu, ED Earle Journal: Chromosoma Volume: 104 Issue: 8 Pages: 545-50 Pubmed: Pubmed ID 8662247

Preparation of tomato meiotic pachytene and mitotic metaphase chromosomes suitable for fluorescence in situ hybridization (FISH).

Author(s): XB Zhong, J Hans de Jong, P Zabel Journal: Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology Volume: 4 Issue: 1 Pages: 24-8 Pubmed: Pubmed ID 8653264

1995 1995

1 publication

Two-dimensional spreads of synaptonemal complexes from solanaceous plants. VI. High-resolution recombination nodule map for tomato (Lycopersicon esculentum).

Author(s): JD Sherman, SM Stack Journal: Genetics Volume: 141 Issue: 2 Pages: 683-708 Pubmed: Pubmed ID 8647403