Clone hba-318c22

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Clone
Clone name
hba-318c22
LE_HBa0318C22
C03HBa0318C22
P318C22
Clone type
BAC
Contamination
none
Estimated length
88,526
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this? 
Plausible matches Additional Info
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 3 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 3
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Chinese Academy of Sciences
Full Sequence
114,286 bp
C03HBa0318C22.1
EU124741.2 (GenBank)
[View]
[Download fasta]
[Download full submission] (212.52 MB)
End Sequences
None
Warnings
  • poor correspondence with in vitro restriction fragments
    (match score below 0.7)
FTP
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (16)
2788, 2788, 2957, 2957, 3309, 4173, 4173, 4365, 4549, 5650, 6514, 6717, 7116, 8325, 9645, 12500
HindIII in silico (35)
1249, 1330, 1349, 1358, 1417, 1465, 1492, 1546, 1615, 1624, 1690, 1770, 1903, 1978, 2199, 2225, 2249, 2551, 2667, 2755, 3186, 3412, 3432, 3438, 3452, 3502, 3512, 3537, 3709, 4290, 4295, 5291, 7233, 7340, 8426
Fragment Lengths Match Score
0.61
Annotations  
Browse
LE_HBa0318C22 has no browsable sequence annotations
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