Clone hba-325d7
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Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg977 : [coherent], 13 members:
LE_HBa0026C01, C07HBa0028C05, LE_HBa0034K06, LE_HBa0086F12, LE_HBa0191N02, C07HBa0229N08, LE_HBa0247D07, LE_HBa0279M04, LE_HBa0286G23, LE_HBa0314J24, LE_HBa0319G10, C07HBa0325D07, C07HBa0328B07
Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
Conflicted matches
None
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Marker matches - BLAST |
Marker matches - manual |
Physical map (from marker matches) |
FISH map |
FISH images |
SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
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644-01 1 | Composite | Fluorescence | Phase | 41.3% |
644-04 1 | Composite | Fluorescence | Phase | 41.7% |
644-11 1 | Composite | Fluorescence | Phase | 43.9% |
644-16 1 | Composite | Fluorescence | Phase | 38.6% |
644-18 1 | Composite | Fluorescence | Phase | 43.6% |
644-19 1 | Composite | Fluorescence | Phase | 42.1% |
644-23a 1 | Composite | Fluorescence | Phase | 48.3% |
644-23b 1 | Composite | Fluorescence | Phase | 44.7% |
644-24 1 | Composite | Fluorescence | Phase | 46.9% |
644-29 1 | Composite | Fluorescence | Phase | 45.1% |
644-37 1 | Composite | Fluorescence | Phase | 41.3% |
644-38 1 | Composite | Fluorescence | Phase | 45.0% |
644-45 1 | Composite | Fluorescence | Phase | 49.6% |
644-48 1 | Composite | Fluorescence | Phase | 48.8% |
644-49 1 | Composite | Fluorescence | Phase | 42.7% |
644-52 1 | Composite | Fluorescence | Phase | 40.0% |
Mean±sd | 44.0%±3.2% |
Given an estimated length of 5.8µm for chromosome 7P and the mean percentage above, this BAC is approximately 2.6µm±0.2µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
IL Mapping |
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This clone is being sequenced by the Chromosome 7 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 7
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HTGS phase
2 - fragmented, ordered
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Sequencing Status
complete
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Sequencing Organization
Uploaded by account 'france'
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Full Sequence
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End Sequences
None
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Warnings
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FTP | ||
Chromosome Assembly
this clone is not part of a chromosome assembly
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Restriction Fragments
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Browse
LE_HBa0325D07 has no browsable sequence annotations
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