Clone slm-18d2

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Clone
Clone name
slm-18d2
SL_MboI0018D02
C09SLm0018D02
Clone type
BAC
Contamination
none
Estimated length
104,327
Library
Name
Tomato MboI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
MboI
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this?None
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches)Not on Physical Map
FISH mapNot on FISH map
FISH imagesNone
IL Mapping 
Assigned to project
Spain
IL-mapped to chromosome
-
IL-mapped to IL segment
-
IL mapping notes
-
Sequencing  
This clone is being sequenced by the Chromosome 9 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 9
HTGS phase
2 - fragmented, ordered
Sequencing Status
complete
Sequencing Organization
Uploaded by account 'spain'
Full Sequence
128,047 bp
C09SLm0018D02.2
AC233063.2 (GenBank)
[View]
[Download fasta]
[Download full submission] (123.81 MB)
End Sequences
Warnings
  • sequence is not finished to HTGS3
FTP
Chromosome Assembly   
Restriction Fragments
HindIII in vitro (27)
1046, 1136, 1186, 1291, 1387, 1507, 1718, 1853, 1973, 2206, 2801, 2924, 3122, 3270, 3506, 3608, 3714, 4586, 5242, 5768, 5846, 6212, 6465, 6787, 7568, 8532, 9073
HindIII in silico (36)
1040, 1117, 1135, 1186, 1271, 1377, 1454, 1495, 1710, 1820, 1848, 1943, 2198, 2814, 2909, 2933, 3083, 3119, 3127, 3175, 3205, 3275, 3302, 3511, 3608, 3620, 3745, 4557, 4578, 5790, 5905, 6169, 6357, 6686, 6775, 8821
Fragment Lengths Match Score
0.87
Annotations  
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SL_MboI0018D02 has no browsable sequence annotations
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