Clone slm-143i9

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Clone
Clone name
slm-143i9
SL_MboI0143I09
C09SLm0143I09
Clone type
BAC
Contamination
none
Estimated length
104,859
Library
Name
Tomato MboI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
MboI
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this?None
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches)Not on Physical Map
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 9 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 9
HTGS phase
2 - fragmented, ordered
Sequencing Status
none
Sequencing Organization
Uploaded by account 'spain'
Full Sequence
120,727 bp
C09SLm0143I09.1
AC225330.1 (GenBank)
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[Download fasta]
[Download full submission] (250.13 MB)
End Sequences
Warnings
  • sequence is not finished to HTGS3
FTP
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (26)
1067, 1232, 1258, 1520, 1695, 1849, 2236, 2405, 2616, 2827, 3026, 3216, 3533, 3742, 3866, 3960, 4258, 4395, 4861, 5193, 5754, 6248, 6819, 7757, 9291, 10235
HindIII in silico (30)
1144, 1164, 1245, 1369, 1376, 1424, 1559, 1585, 1775, 1787, 1820, 1907, 2001, 2596, 2690, 2956, 2991, 3075, 3167, 3247, 3771, 3956, 4238, 5184, 5648, 5817, 6094, 8716, 13140, 18561
Fragment Lengths Match Score
0.89
Annotations  
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SL_MboI0143I09 has no browsable sequence annotations
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