Clone hba-80d1

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Clone
Clone name
hba-80d1
LE_HBa0080D01
C09HBa0080D01
P080D01
Clone type
BAC
Contamination
none
Estimated length
92,795
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this?None
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches)Not on Physical Map
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 9 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 9
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
not recorded
Full Sequence
102,374 bp
C09HBa0080D01.1
AC214463.1 (GenBank)
[View]
[Download fasta]
[Download full submission] (280.42 MB)
End Sequences
Warnings
none
FTP
Chromosome Assembly   
Restriction Fragments
HindIII in vitro (27)
1536, 1555, 1653, 1653, 1763, 1912, 1977, 2230, 2230, 2382, 2382, 2659, 2659, 3063, 3240, 3278, 3507, 3579, 3684, 3715, 4297, 4426, 4693, 5125, 6101, 8000, 9496
HindIII in silico (28)
1131, 1159, 1187, 1491, 1536, 1555, 1644, 1649, 1742, 1879, 1925, 2239, 2379, 2683, 3061, 3172, 3268, 3702, 3745, 4243, 4299, 4371, 4428, 4555, 4896, 5807, 7818, 9320
Fragment Lengths Match Score
0.96
Annotations  
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LE_HBa0080D01 has no browsable sequence annotations
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