Clone hba-34a2

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Clone
Clone name
hba-34a2
LE_HBa0034A02
C03HBa0034A02
P034A02
Clone type
BAC
Contamination
none
Estimated length
121,565
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this?None
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches)Not on Physical Map
FISH mapNot on FISH map
FISH imagesNone
IL Mapping 
Assigned to project
China
IL-mapped to chromosome
3
IL-mapped to IL segment
-
IL mapping notes
-
Sequencing  
This clone is being sequenced by the Chromosome 3 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 3
HTGS phase
2 - fragmented, ordered
Sequencing Status
complete
Sequencing Organization
Uploaded by account 'jianfeng-ren'
Full Sequence
143,702 bp
C03HBa0034A02.1
AC238562.1 (GenBank)
[View]
[Download fasta]
[Download full submission] (193.33 MB)
End Sequences
Warnings
  • sequence is not finished to HTGS3
FTP
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (24)
2211, 2409, 2488, 2488, 2635, 2635, 2680, 2860, 3464, 3652, 4028, 4219, 4238, 4296, 4296, 4443, 4443, 5607, 6084, 7513, 8160, 8514, 13083, 15119
HindIII in silico (28)
1163, 1361, 1459, 1512, 2219, 2424, 2500, 2508, 2646, 2647, 2667, 2857, 3516, 3691, 4085, 4213, 4254, 4312, 4386, 4453, 5324, 5842, 7513, 8422, 11198, 12222, 12812, 14679
Fragment Lengths Match Score
0.89
Annotations  
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LE_HBa0034A02 has no browsable sequence annotations
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