Clone Read LE_HBa0158P24_T7_103295

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0158P24_T7_103295
Primer
T7
ID from Seq. Facility
LE_HBa_158_P24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
439 trimmed for vector and quality, 768 raw
Genbank Accession
DU093663
Sequence
>LE_HBa0158P24_T7_103295 (raw untrimmed)
TGGGACCCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTATGCCAAATTCTCCAAGTGTGACTTTTGGCTAGATTCAGTGTCCTTCTTGGG
GCATGTGGTTTCCCTGGATGGAGTGATGGTGGATCCTACCAAGATTGAAGCAGTGAAGAATTGGGTAAGACCTATTAATGTTACAGAGGTAAGGAGCTTT
GTTGGTTTAGCTAGCTACTACCCTCGATTTGTCAAGGGATTTTCTTCTGTTGCTTCCCAACTGACAAATTGGACTAAGCAGAGTGTCCCAATTGTATGGT
CGGAAGAGTGTGAAGAAAGCTTTCAGAAACTCAAGACCTTATTGACTACTGCACCAATTCTTACCCTGCCAGTGGAAGGTAAGAATTTCATTGTTTATTG
TGATGCATCCTATTCTGGTTTGGTGCAGTGCTAATGCAAGAGAAGAATGTAATTGCTTATGCTTCGAGGAAATTAAAGGTGCATGAACGTTATTTATCCG
ACCCATGATTTGTGAGTTGGCTTCTATTACTTTTCGCTTAATACAATGGATATTTCTTCCTTCTTTGCTCTCTATTTGAATTCTAACTCAGACTCTTGGA
CCTTATATTTAGAGGATGTATCATGAAGTTGTTAATTTAACGTCTTTACGAGGTGCTACTTTTATAACTAGCTGGCCTCTATAGCACGAATACTATGCTT
CCGCCCGGGCCAGTGTCTGGCACGCTTGATTTCTCTCTCCTTCATTTTTACTAATATATTTTGTTTTC
>LE_HBa0158P24_T7_103295 (trimmed for quality and cloning vector)
AGCTTTATGCCAAATTCTCCAAGTGTGACTTTTGGCTAGATTCAGTGTCCTTCTTGGGGCATGTGGTTTCCCTGGATGGAGTGATGGTGGATCCTACCAA
GATTGAAGCAGTGAAGAATTGGGTAAGACCTATTAATGTTACAGAGGTAAGGAGCTTTGTTGGTTTAGCTAGCTACTACCCTCGATTTGTCAAGGGATTT
TCTTCTGTTGCTTCCCAACTGACAAATTGGACTAAGCAGAGTGTCCCAATTGTATGGTCGGAAGAGTGTGAAGAAAGCTTTCAGAAACTCAAGACCTTAT
TGACTACTGCACCAATTCTTACCCTGCCAGTGGAAGGTAAGAATTTCATTGTTTATTGTGATGCATCCTATTCTGGTTTGGTGCAGTGCTAATGCAAGAG
AAGAATGTAATTGCTTATGCTTCGAGGAAATTAAAGGTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.955413
Expected error %
0.511396
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT66771.1| Score 162 E Value 2e-42 Identity 61.10% Align. Length 436bp (99.32%) Frame 1
putative polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38745.1| Score 161 E Value 4e-42 Identity 61.10% Align. Length 436bp (99.32%) Frame 1
putative polyprotein, 3'-partial [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0158P24
Clone
Clone name
hba-158p24
LE_HBa0158P24
P158P24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found