Clone Read LE_HBa0011K19_SP6_121209

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0011K19_SP6_121209
Primer
SP6
ID from Seq. Facility
LE_HBa_011_K19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
683 trimmed for vector and quality, 963 raw
Genbank Accession
Sequence
>LE_HBa0011K19_SP6_121209 (raw untrimmed)
AAAAAATAAATTGTCTTCTTCCCCTAATTGNANANNNNNNNNNNNNNCNNNNNANNCNANTNCNNNGNNNNGCCNCANCAACATTNACATTNNAAAATNC
AAACATTGTCACCATAACNACAAACAACACANCAATAACCTTATTGNATCCCATTTTTCTTTTTGATAATTTTTTTTTTGTGCGACACAATTAAGTGAGA
ATATTATTGTTTGAATTAAATATAATGTGTTTATGTTAGTTTGAATGTTCATTGGCATTTATAGAGTTATGTAATCGTTATAGCCTTTGAGGCTTTAATT
AATTTTAGGTTTAATTTGTGGAGAGGAGACGATTGTGCTTATTGAGAATGGGTTTATTCATAGGTTATCTTTAATTATTGGTTTAATCGAGGCATGATTG
TGTATCGATTTAATTAGACCGTTCATTTATTTTATTGGAAATTTTACTTATGAAGGGATTATACTAATTTAAAGTTTTTTGAACAATCTTATTATGATAT
TAAAAAGAAACTTTATGAGGTGCGTCAAGTAGGACACACATTGATGGTCTTAAAAAGGCAATAACAAGCTAATTCTTTATACAAATATTAATTGATAAAC
TTAGATAATTATTTTAAAATATAGAAAAACTTAATTTGTAATATAATTAGAAATATTTGTTTAATTAGATAGTTATTTCAAAAAATAGGTAACTAACACG
TATTGAATTCAGCATATTATAAAGCCCTTCATAGTAACATTTTTCTTCTGATAATAAGATAAACATTGTGGGAGCACGATATAATAATAGAAGTCCATTA
ATGATGCGTCGTACTTCGAAAATAAATAATTAAATATGCAAAGCAATGAATTAGGTCATGACATTTTTTGGTAAATCTTAATCTTAATTCTGTTTAAACT
TGAATTTCATGTAAAATTAAAAAAAAAAAAAAAGTCAATAATCTATATGATTTGAATCTTTTT
>LE_HBa0011K19_SP6_121209 (trimmed for quality and cloning vector)
CAAACATTGTCACCATAACNACAAACAACACANCAATAACCTTATTGNATCCCATTTTTCTTTTTGATAATTTTTTTTTTGTGCGACACAATTAAGTGAG
AATATTATTGTTTGAATTAAATATAATGTGTTTATGTTAGTTTGAATGTTCATTGGCATTTATAGAGTTATGTAATCGTTATAGCCTTTGAGGCTTTAAT
TAATTTTAGGTTTAATTTGTGGAGAGGAGACGATTGTGCTTATTGAGAATGGGTTTATTCATAGGTTATCTTTAATTATTGGTTTAATCGAGGCATGATT
GTGTATCGATTTAATTAGACCGTTCATTTATTTTATTGGAAATTTTACTTATGAAGGGATTATACTAATTTAAAGTTTTTTGAACAATCTTATTATGATA
TTAAAAAGAAACTTTATGAGGTGCGTCAAGTAGGACACACATTGATGGTCTTAAAAAGGCAATAACAAGCTAATTCTTTATACAAATATTAATTGATAAA
CTTAGATAATTATTTTAAAATATAGAAAAACTTAATTTGTAATATAATTAGAAATATTTGTTTAATTAGATAGTTATTTCAAAAAATAGGTAACTAACAC
GTATTGAATTCAGCATATTATAAAGCCCTTCATAGTAACATTTTTCTTCTGATAATAAGATAAACATTGTGGGAGCACGATAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.906033
Expected error %
1.132
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0011K19
Clone
Clone name
hba-11k19
LE_HBa0011K19
P011K19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found