Clone Read LE_HBa0027D09_SP6_137237

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0027D09_SP6_137237
Primer
SP6
ID from Seq. Facility
LE_HBa_027_D09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
612 trimmed for vector and quality, 975 raw
Genbank Accession
Sequence
>LE_HBa0027D09_SP6_137237 (raw untrimmed)
AATTACTTCCCCATTAACATATTTTAATGGGGCCTACAAACCTCCTTACCTTTTAGAGAAGCTAATACCTCATTATATTGTTTCAACCACCTTTTAAGCA
TGTGAATAGGTAAGATATACTACAGAGCTCCCAATTGTGATCAATTATCAAACTAAACACTATCCTGACCTTCTCTTGGTTCCTACCAAATTTCTTGATC
AAAATAATGTGTAGCTTGAAGCACAACCTTCCATACCTGTGAACCACTATTCCATTAAACTACTTGAGATCTATGTCTCTTACAATATTTGTTCCACTGA
AATTAGCCCATAAATAATAAGAAGTCCTAAACTTCCGCTAAAGTTTTGCGAAAAGTATTTGGACACATCAAATAAAGATCTAAACCCCTTACCTCCCTCA
CACTTTGGAACATAGATATCATCCCAAGCACTCGAGTGAGTAGCTGCCATCCTCCTTAAAGTTCCAAAATAATTTAACAAAAATCCTATGAATATCATAA
CAAACACATTTCAGAGGGCTAAGTGCAGATAAAGGGTAAATAGGCACAATTTGCAACACATGATTTATCATCGGCCGACTCAAAATAGTAACTATTATGC
ATACAGTAATAGTGATTAATGTGCATTGATTAATAATGTGAAGTTCTATATGTACTTTATTGTGTGATTGTGTGACTTGGTTGTGTGTCTTGGATAATCT
ATGTGTTCTTTGTGAATGGTATGGAATTTAGAGACCATGAAATTTATAATATTGAACCCTCTCAATCAAAGTAATTCCTTGACTAAAGAAAACATGATGA
AATTATTGGTTAAAGATTTGAACGGTGGTGATAATAAGGTGATTAATTAACTATATTTTTTTTGGATCTGGGGGGTCCCGTTCCGACATGTTATTAATTG
GAAAAGGATTTCCGTATTGAAAAATGTATTTTAATAAGGGGCGTACCTTTACAAATACTTATTTTTGTTATGTGT
>LE_HBa0027D09_SP6_137237 (trimmed for quality and cloning vector)
CCTACAAACCTCCTTACCTTTTAGAGAAGCTAATACCTCATTATATTGTTTCAACCACCTTTTAAGCATGTGAATAGGTAAGATATACTACAGAGCTCCC
AATTGTGATCAATTATCAAACTAAACACTATCCTGACCTTCTCTTGGTTCCTACCAAATTTCTTGATCAAAATAATGTGTAGCTTGAAGCACAACCTTCC
ATACCTGTGAACCACTATTCCATTAAACTACTTGAGATCTATGTCTCTTACAATATTTGTTCCACTGAAATTAGCCCATAAATAATAAGAAGTCCTAAAC
TTCCGCTAAAGTTTTGCGAAAAGTATTTGGACACATCAAATAAAGATCTAAACCCCTTACCTCCCTCACACTTTGGAACATAGATATCATCCCAAGCACT
CGAGTGAGTAGCTGCCATCCTCCTTAAAGTTCCAAAATAATTTAACAAAAATCCTATGAATATCATAACAAACACATTTCAGAGGGCTAAGTGCAGATAA
AGGGTAAATAGGCACAATTTGCAACACATGATTTATCATCGGCCGACTCAAAATAGTAACTATTATGCATACAGTAATAGTGATTAATGTGCATTGATTA
ATAATGTGAAGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.948097
Expected error %
0.7917
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0027D09
Clone
Clone name
hba-27d9
LE_HBa0027D09
C08HBa0027D09
P027D09
Clone type
BAC
Contamination
none
Estimated length
109,858
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found