Notice: If you try to use Google Chrome to access the SGN FTP site, please check this link to resolve connection issues.

Clone Read LE_HBa0071F03_SP6_15988

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0071F03_SP6_15988
Primer
SP6
ID from Seq. Facility
LE_HBa_071_F03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
198 trimmed for vector and quality, 803 raw
Sequence
>LE_HBa0071F03_SP6_15988 (raw untrimmed)
TTATCTCACACACACAATATCCGTGAGACCCCTTTTCATATGCTCTAACTTTTCCAATGATGACAATATTCACGTATTTATATTCATATCCAACAATTAG
ATAGTG
GACCTTTTTTATCCTAGTTTCGAGGGGGGAAAGTTATTTTTCTTCAAATAATACTAGATTGTAAATTTAATACATAATTTGGGATATTTTCGTT
TAGATAATTGATAAAGTATGTTTCATACCCTCAACTTCAATAAAGTGTTCAAATTAGACAATTTTGGAATTTTTTTCTAAAAAAAAATTGTGTGCTTTAA
CTTATCTATTGAACAGCTAAGTAAACTATACAAAACATAACATTTTAATTAAAATCATATACACTAATCTCAAGTAAAATTGTCTAAAGGTTTAGTTTAC
TTGTTATATCGAATATATATCAACTAAAGTGAACGATACATTTATGCGATCATCTTTATTGCTTACCACATTAAAACAATGAAAACACACGGGCAAAAAC
GTCTAGTCATTTTATGTGATTAGCCTTACTACCTCCACATGACACGAAGGAGATCAGATGGGATATACTTACTCTTAACCTAGATGCCTTTAGAATATTG
TTAGGCACTGGCCATTTCATATTAATCTCATCCTGAAATATAGCTTATTCTCGTACACTAATCTGAACAATAGATCTTACCTTCTATCGCGGATCTCCAT
CAGCCATGTTATGTGCAAACATACTTCTTAATCTCACAACAGAATAATCACTATGTCTTCAGAATTCTTCCCGCACCACTCTCCTCTGCTTCACTCATTC
TGC
>LE_HBa0071F03_SP6_15988 (trimmed for quality and cloning vector)
GACCTTTTTTATCCTAGTTTCGAGGGGGGAAAGTTATTTTTCTTCAAATAATACTAGATTGTAAATTTAATACATAATTTGGGATATTTTCGTTTAGATA
ATTGATAAAGTATGTTTCATACCCTCAACTTCAATAAAGTGTTCAAATTAGACAATTTTGGAATTTTTTTCTAAAAAAAAATTGTGTGCTTTAACTTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.882546
Expected error %
2.05458
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0071F03
Clone
Clone name
hba-71f3
LE_HBa0071F03
P071F03
Clone type
BAC
Contamination
none
Estimated length
97,767
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found