Clone Read LE_HBa0005J17_T7_2001

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0005J17_T7_2001
Primer
T7
ID from Seq. Facility
LE_HBa_005_J17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
794 trimmed for vector and quality, 929 raw
Genbank Accession
Sequence
>LE_HBa0005J17_T7_2001 (raw untrimmed)
CTCGGTACCCGGGGTTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAGCATCCAAGGGAGTGGCCTAGTCCCTTGTGAGGTGGTTGATAACCTGAGGT
CTCAGTTCAGAACTCCTTGGAGACAAAAAAAAACTAGGTGATTCTTCCCATCTGTCCTAGCCTTGATGGACTTACCTGGTACCTGTTGGTGGTGGTAGGT
AGTAGGTATCCCGTGGAATTAGTTGAGGTGCGCGAAAGCTGGCCCGGACACCACGTTCATAAAAAAAAATATTATCCAAGCTTACAAGATGAGAGAAAAA
GACAAGGAAGAGCAAAAAATACTTAACTCTAACTTCCCAATGATTAATATATTATCATAGAATATAATAGGAGTAGGCTCCAAAGGATCCCTTAAGAGAT
TCCAATCATTCAAACAACAATTTCAAATCCCTCTGATATGTTTGCAAGAACCAATGGTAGATAATGGGAAGATTCAAAAATACAAAAGAAAACTGGGTAT
GCCTCAATGTTTTTTCAACTGCTCCAATAAAATCTAGATAATTGGACCTCCGAAGTAGATCTATCATTCAAGATAGAGAGCAGCATGTCCTGATCAAGGC
TAACTACCTCAACAACCCTCCAATACGTCAACCATTGTCTATGCTAAAGTTTATGCTAAAAGCACAGAGGAACAAAGAAGGGAGCTTTGGCTAGATCTTA
AAGAAAGAGCCAATAACATTCAAGGAGCTTGGGGACCGATTGGTGATTTTAAGGTAATTACTTCCAGTGATGAAAAAAAAGGAGAAAAAAGGTATAGACC
GGAAGAAAATCTATACTTTCAAGAATGCCTCAATGATAGTGGTCTTTCAAAATGCAGGATACCCAAAATTTTTCTTTTTACTTTGGTGTGAACCACCCGA
AAAATCCTTCCCCATTCACCTTTTTTCAA
>LE_HBa0005J17_T7_2001 (trimmed for quality and cloning vector)
AGCTTAGCATCCAAGGGAGTGGCCTAGTCCCTTGTGAGGTGGTTGATAACCTGAGGTCTCAGTTCAGAACTCCTTGGAGACAAAAAAAAACTAGGTGATT
CTTCCCATCTGTCCTAGCCTTGATGGACTTACCTGGTACCTGTTGGTGGTGGTAGGTAGTAGGTATCCCGTGGAATTAGTTGAGGTGCGCGAAAGCTGGC
CCGGACACCACGTTCATAAAAAAAAATATTATCCAAGCTTACAAGATGAGAGAAAAAGACAAGGAAGAGCAAAAAATACTTAACTCTAACTTCCCAATGA
TTAATATATTATCATAGAATATAATAGGAGTAGGCTCCAAAGGATCCCTTAAGAGATTCCAATCATTCAAACAACAATTTCAAATCCCTCTGATATGTTT
GCAAGAACCAATGGTAGATAATGGGAAGATTCAAAAATACAAAAGAAAACTGGGTATGCCTCAATGTTTTTTCAACTGCTCCAATAAAATCTAGATAATT
GGACCTCCGAAGTAGATCTATCATTCAAGATAGAGAGCAGCATGTCCTGATCAAGGCTAACTACCTCAACAACCCTCCAATACGTCAACCATTGTCTATG
CTAAAGTTTATGCTAAAAGCACAGAGGAACAAAGAAGGGAGCTTTGGCTAGATCTTAAAGAAAGAGCCAATAACATTCAAGGAGCTTGGGGACCGATTGG
TGATTTTAAGGTAATTACTTCCAGTGATGAAAAAAAAGGAGAAAAAAGGTATAGACCGGAAGAAAATCTATACTTTCAAGAATGCCTCAATGAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.956859
Expected error %
0.862141
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0005J17
Clone
Clone name
hba-5j17
LE_HBa0005J17
P005J17
Clone type
BAC
Contamination
none
Estimated length
108,010
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found