Clone Read LE_HBa0080M07_SP6_20940

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0080M07_SP6_20940
Primer
SP6
ID from Seq. Facility
LE_HBa_080_M07-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
581 trimmed for vector and quality, 801 raw
Genbank Accession
Sequence
>LE_HBa0080M07_SP6_20940 (raw untrimmed)
AAAAAGCCGCGGCCATATCAAATACATTTTTCCCTTTGTGTTGGGTAGTAATCCTCCAACAAATATCGATTTATCCGTAAAATATAAACGAGTAACTCAA
TAATTCACTTAATATGATAAAAATTTCATCAATTATTTGACTAAAACAATAAAAATTTACATTCAATGTCATTATCATAATTGTCTCGCGCAACTTTGAT
TGAATGAGTACTTGCAACTTTCAACACACCAGTCGAACTAGACTTCACCAAGTTGTTGGGTTGCGGCTTTTTAGGAGCCGATAAGAGGCCACCATTTTTT
GGTGGCGAGGACCTACCTTGCTTTATCTATAGAAAATATTTCGAATTAAAATATATATTAGACAAAGCTTCAGAGGTAAAATTACAATTTAAAAAAGTTT
TTATGATTTTTACATAACTAGCATGTGAATCAAACGATTCATAAAAGTACTACTAACCATTGAAGCATAGGTAATTTTTGGAGCCTCGTTCTCAACGATG
GCGGGCCCCACAGGGTCCTTCTTTTTTTGTTCTCGTTCTTTTGGGCTTGAAGGCTTCTGGTCAACTTTATCATTAACATTGTTTTCAGCTTTGCTCTGAA
CGTTGTTTTCAGCTTTGCTCTGAACATTGTTTTCAGCTTTACTCTGAAACGTAATTTTCAGCTTTGCTCTGAACGTTGTTTTCAGCATTGGTCTGAATAA
CTAAAAATCCAAATGGAAAACAAATCCTATACAGTTTAAAATTCCTTGCGCTAACCAAAAAAAAATTTTATACAAACCGGGTCACGCGAATTTATAAGAC
A
>LE_HBa0080M07_SP6_20940 (trimmed for quality and cloning vector)
GGTAGTAATCCTCCAACAAATATCGATTTATCCGTAAAATATAAACGAGTAACTCAATAATTCACTTAATATGATAAAAATTTCATCAATTATTTGACTA
AAACAATAAAAATTTACATTCAATGTCATTATCATAATTGTCTCGCGCAACTTTGATTGAATGAGTACTTGCAACTTTCAACACACCAGTCGAACTAGAC
TTCACCAAGTTGTTGGGTTGCGGCTTTTTAGGAGCCGATAAGAGGCCACCATTTTTTGGTGGCGAGGACCTACCTTGCTTTATCTATAGAAAATATTTCG
AATTAAAATATATATTAGACAAAGCTTCAGAGGTAAAATTACAATTTAAAAAAGTTTTTATGATTTTTACATAACTAGCATGTGAATCAAACGATTCATA
AAAGTACTACTAACCATTGAAGCATAGGTAATTTTTGGAGCCTCGTTCTCAACGATGGCGGGCCCCACAGGGTCCTTCTTTTTTTGTTCTCGTTCTTTTG
GGCTTGAAGGCTTCTGGTCAACTTTATCATTAACATTGTTTTCAGCTTTGCTCTGAACGTTGTTTTCAGCTTTGCTCTGAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.955272
Expected error %
0.14013
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0080M07
Clone
Clone name
hba-80m7
LE_HBa0080M07
P080M07
Clone type
BAC
Contamination
none
Estimated length
75,035
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found