Clone Read LE_HBa0184C04_T7_258848

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0184C04_T7_258848
Primer
T7
ID from Seq. Facility
LE_HBa_184_C04-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
737 trimmed for vector and quality, 882 raw
Sequence
>LE_HBa0184C04_T7_258848 (raw untrimmed)
CATCGACGGGGATCTNAGAGTCGACCTGCAGGCATGCAAGCTTTTGCACCTCCAAAGATTTTGATTTTGCTGAAAGAATGAGATGAATATAAATAGACCA
AAATGAAGCAGAGTCACCTCCTGAGTCTCGTGATGTTAATTGAAACGGAAAAAGTAACTTTGTTGGTATTACAAGAAACGTGAAAAGCAAAATTTGTTTG
GCATTTTGTTTATCATTCAATTTTCAGCGAAAAATCGTTTCTTTCTTTGGATTTATCGCCAGCAAAATTTGAAGTTTTTGACAGTCATGGCCTCAAATAC
CCAATCAGATACCGTTCATCTTCTTTAAGAAGAAAAACTAAATATTTAACACCAATAAAACATAATTTCAAGAAAAGTGATAAAAGCTCTGATCTTAATA
TTCAAAATTAACGGATTAAAATTAATTATTATTCTAATTGAGTCAATTGTAGAACTTAGATTCCTGGTAATGCGTAACATATTTAAAATTCAAACTAGTT
CAAGCAAATCTTTCAAAATCCTTAACTCTGCTTCAAAATTTGGTAATTTGGAAGAAGATACATCATGAACATTAAGACATTTTGGAGTATGATGTTTAAA
GTAAATTACGAACAATAAAAAAGCGATAAAATCGTTGTTGGAAACAATATTTCTTTTATGAATCTGAAATCGAAGCTGAATTATAAATTGATGAGTTGGA
AAAAAAAATAGACATCAGATAGATACATCGTAAAACTGTCTCCAGATACATTAAAATGTAAAGAATTCNTATACATAACCAAATAACTAGAATCACAATG
AAAGTTGGTAGCCTTTTTTCAAATAATAGCAATAGGTGTATGAATCGGGTATTAAAAATAATGGAAAGTGTCATGGTTATGA
>LE_HBa0184C04_T7_258848 (trimmed for quality and cloning vector)
CTGCAGGCATGCAAGCTTTTGCACCTCCAAAGATTTTGATTTTGCTGAAAGAATGAGATGAATATAAATAGACCAAAATGAAGCAGAGTCACCTCCTGAG
TCTCGTGATGTTAATTGAAACGGAAAAAGTAACTTTGTTGGTATTACAAGAAACGTGAAAAGCAAAATTTGTTTGGCATTTTGTTTATCATTCAATTTTC
AGCGAAAAATCGTTTCTTTCTTTGGATTTATCGCCAGCAAAATTTGAAGTTTTTGACAGTCATGGCCTCAAATACCCAATCAGATACCGTTCATCTTCTT
TAAGAAGAAAAACTAAATATTTAACACCAATAAAACATAATTTCAAGAAAAGTGATAAAAGCTCTGATCTTAATATTCAAAATTAACGGATTAAAATTAA
TTATTATTCTAATTGAGTCAATTGTAGAACTTAGATTCCTGGTAATGCGTAACATATTTAAAATTCAAACTAGTTCAAGCAAATCTTTCAAAATCCTTAA
CTCTGCTTCAAAATTTGGTAATTTGGAAGAAGATACATCATGAACATTAAGACATTTTGGAGTATGATGTTTAAAGTAAATTACGAACAATAAAAAAGCG
ATAAAATCGTTGTTGGAAACAATATTTCTTTTATGAATCTGAAATCGAAGCTGAATTATAAATTGATGAGTTGGAAAAAAAAATAGACATCAGATAGATA
CATCGTAAAACTGTCTCCAGATACATTAAAATGTAAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.920914
Expected error %
0.0399615
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0184C04
Clone
Clone name
hba-184c4
LE_HBa0184C04
C08HBa0184C04
P184C04
Clone type
BAC
Contamination
none
Estimated length
114,367
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found