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Clone Read LE_HBa0177F14_SP6_264142

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0177F14_SP6_264142
Primer
SP6
ID from Seq. Facility
LE_HBa_177_F14-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
651 trimmed for vector and quality, 949 raw
Sequence
>LE_HBa0177F14_SP6_264142 (raw untrimmed)
CAATGATCTCAGCTTACAAGTGCAATGCTCATGTGAAGTCCTATAACCCCACACAACCAAGTAAAGAAGATATGAGATCACAAGTAATCCTCTACTTCAT
ACAACATTTCATCATAGGTAGCCATCATCACAAATAACAATTTAGATCAATAACATCTTTATTAATATAGTCAACATCATTAAGAGTATCATCATATAAA
GCTAACATTTCATAATACATGATTTCATAATACATAATAATCATAAGGTTAACCCAATAGGACTTCACTCAATGAAAACTAGTGCAATGCATAGGTAGAG
TCCCATACCCCTACCTACACTAAGTCAAACCCATTAAGTCACCCTTGTTAGTGTTCACTTTATTACTTTATTTTACTTTCGGGAATAATTGTCTTAGCCG
ACATAGACCACATGAGATAAAAGTGGAATTTTGTTCCATGAAATCTTACACCGAAAGAAGGCGGTCTACTTGATAAGATACAACCAAAACATGAACATAG
CATTCTAGGTGGATCCACTAGATAGTCTTCCTATGGGGGCAACATAGTTCAAGAACTAGGAGATATACTTGAGACCTATTTATGCACATTGCATTATTCT
CTCTATCTCATGAGTACAATGGTGAATTTACATATCATCATCATCATATCATAGTAAGGCACATTCCCAATCAACCTTATATCATCATACCTTAATCATA
ATCTCATAGTTCCTATACTGAACACATTTTCATTAGAATTCATCAAACCATCACCTACTTAATCTAAATCCCTGTGAATACTACAATTTGGACATTGGTT
TCAAGTACAAACCCATTACAATGGAAGTGGATCTAAAGGGGCTTAACAATTTCCCCATCAAAAAGCCCCCCCTTAAGGGGGTTTACCAATCAAACCAAAA
CATAATTCCCTCTCTCCAAGAGGGCCTTTTAAATACCTCCAACGAATTG
>LE_HBa0177F14_SP6_264142 (trimmed for quality and cloning vector)
TCAGCTTACAAGTGCAATGCTCATGTGAAGTCCTATAACCCCACACAACCAAGTAAAGAAGATATGAGATCACAAGTAATCCTCTACTTCATACAACATT
TCATCATAGGTAGCCATCATCACAAATAACAATTTAGATCAATAACATCTTTATTAATATAGTCAACATCATTAAGAGTATCATCATATAAAGCTAACAT
TTCATAATACATGATTTCATAATACATAATAATCATAAGGTTAACCCAATAGGACTTCACTCAATGAAAACTAGTGCAATGCATAGGTAGAGTCCCATAC
CCCTACCTACACTAAGTCAAACCCATTAAGTCACCCTTGTTAGTGTTCACTTTATTACTTTATTTTACTTTCGGGAATAATTGTCTTAGCCGACATAGAC
CACATGAGATAAAAGTGGAATTTTGTTCCATGAAATCTTACACCGAAAGAAGGCGGTCTACTTGATAAGATACAACCAAAACATGAACATAGCATTCTAG
GTGGATCCACTAGATAGTCTTCCTATGGGGGCAACATAGTTCAAGAACTAGGAGATATACTTGAGACCTATTTATGCACATTGCATTATTCTCTCTATCT
CATGAGTACAATGGTGAATTTACATATCATCATCATCATATCATAGTAAGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.939502
Expected error %
0.0993091
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0177F14
Clone
Clone name
hba-177f14
LE_HBa0177F14
C10HBa0177F14
P177F14
Clone type
BAC
Contamination
none
Estimated length
77,255
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found