Clone Read LE_HBa0185E03_SP6_277750

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0185E03_SP6_277750
Primer
SP6
ID from Seq. Facility
LE_HBa_185_E03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
599 trimmed for vector and quality, 962 raw
Sequence
>LE_HBa0185E03_SP6_277750 (raw untrimmed)
TTCCAGTTTTTTTATTGGTTGAGAGGAATTTAGGAGAGTGATATGTTTGGGTTCTTGGGAAATAGGAGAATGGTTTTTTAGTAGGTCGATGAAGGACTTA
CAAAATTATATAGATCATAGGATTGAAGCTAAAACGACATAATATAGGCTGAAAACATTTAGGAAAAGACTCAAAAGACCTTCAGTTATACCTACAGATC
ATACATATTTCTATGGCTGATCTTTCTACAGAAACGTAAACTAAGTATGGGAACCTAAAAATCAGCCAACGTTTTACGATACCCTTCTACGGTCTGTATG
ACTTCTACGACCAACCTACGAGACCCGTATATGACTCATAGGCCATTTGACAAAATGTCCTCGTCAACCGTAGGATAGGGTACTGGACTTGATTTCAAAA
ATTATTTTCTCATATCTATGAGACTGGTGATGACCTGTAGAAATTTCTATGAACCATAGAATGGTCTTGTAGACCTAAACCAATAGTGAAAATTCATGCA
ACCTATTCCCTTATCGAAGTCTAAGGTGTTAGACATGCCTCTTGTCACTCTTTCTGCTTGGGTTGAGAGTTGATTCAATATTGTGGTTATTTCACGTTCC
AGGTTGATGCTAATGATCTGAGTCTGTTATGTCTAGTTTGAGGTTGTTATTTCCCTTTTGAGGTTGATGCTAATGGCTCCTGGCACAGAACTCCTATTAA
GAGGCTTTTCCTTTGTGGTTTTGAGGGTTTGCGTATCTCTTTTTTATACATTGGATTAGAGGGAACTTCACTTTCATTCTGTTTAACGTAATTCATGTTC
TCATAAGGTTTATAGGCATTTTATATATTTGGTTTAGAAATTACACATATCGTTGTCTTTCATGTTTTTTTGGTGTTGTTTTATGTTTTTAACTGTAATA
ATTATTGATTTTTACTCTCGACTATGCGGGTCGGACTATTGTATAAGTTTATGCATGATTAC
>LE_HBa0185E03_SP6_277750 (trimmed for quality and cloning vector)
GGAGAGTGATATGTTTGGGTTCTTGGGAAATAGGAGAATGGTTTTTTAGTAGGTCGATGAAGGACTTACAAAATTATATAGATCATAGGATTGAAGCTAA
AACGACATAATATAGGCTGAAAACATTTAGGAAAAGACTCAAAAGACCTTCAGTTATACCTACAGATCATACATATTTCTATGGCTGATCTTTCTACAGA
AACGTAAACTAAGTATGGGAACCTAAAAATCAGCCAACGTTTTACGATACCCTTCTACGGTCTGTATGACTTCTACGACCAACCTACGAGACCCGTATAT
GACTCATAGGCCATTTGACAAAATGTCCTCGTCAACCGTAGGATAGGGTACTGGACTTGATTTCAAAAATTATTTTCTCATATCTATGAGACTGGTGATG
ACCTGTAGAAATTTCTATGAACCATAGAATGGTCTTGTAGACCTAAACCAATAGTGAAAATTCATGCAACCTATTCCCTTATCGAAGTCTAAGGTGTTAG
ACATGCCTCTTGTCACTCTTTCTGCTTGGGTTGAGAGTTGATTCAATATTGTGGTTATTTCACGTTCCAGGTTGATGCTAATGATCTGAGTCTGTTATG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.968083
Expected error %
0.104699
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0185E03
Clone
Clone name
hba-185e3
LE_HBa0185E03
P185E03
Clone type
BAC
Contamination
none
Estimated length
101,034
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found