Clone Read LE_HBa0006N17_T7_2961

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0006N17_T7_2961
Primer
T7
ID from Seq. Facility
LE_HBa_006_N17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
818 trimmed for vector and quality, 979 raw
Genbank Accession
Sequence
>LE_HBa0006N17_T7_2961 (raw untrimmed)
CCTAACTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTAAGTTACCAAGCCAAATTGCAACTTTTCTTTTTCTGTTTCTAGTCA
ATAGGACACTGATGAGAACATCCATGTGAATTTTTTTTTCTTAGACTTCCTTGCAGTATCATCGTAAGCTGATTATGAATAGCATGCTGAAAATATGTCT
ATCGTATTTTAAGAACACCTCACCTAAAAACAATGAAAATTGGCCAAAAATGGTGAAAGTCGAGACAACAGGGTTGTGGAAGGTTTGTTTCTCAAGAAAG
AAAATATTACATGCCGTAAAAGATGCCCTCTGTATGATACCACGTGGAAACAGTTGCAATCTGAGGCGAAGGCAGAACAATGGGAAATTACAAAGTGAGA
AAAATATCATTTCATTGTCAACTAATCTGTTGAAGAGTCTGTTAGAACTGAAAAATTCAATATCAGATTCAGTAAGATGTGCAATAAACATTATAATACG
ACAGGTACTTGAGAAAAGGGCTGGAATCTACAAATTTACAATTTAAGTCAGATTGGTACGACTATATCGACTATGTATGTACAGAAGGGGCATGGACAAG
CAACTAAATAATGCTCAAGTACAAGATATCAATGAGTAAAGACAGTACTGATCACCCATTCAATTCACTTGCACCTCTTGACAGTCGAGCTACAAATATT
ATGGAGCGGGTATCATTGTGATGGTGTGCAATTGAATCGAACAGAAACACATTCCACGTAGCATACATGTATATTTAGATGAAACCACGAACTCTGCAAA
ATGACAGTGGACACCAGGTGGAGTTTGGAGGCTCTTCTGCTGCTATGAAAGAGGTTGGTACATATGGTGGGAGGGGATACATGTGTGCGTTTTTCCTATT
ATAATATGGAGAGAGGTTAGTAAACAATTTCACTTATTGAGATATACAGCATCTAGAAGCCGGGAAACTCCGCCCTCTG
>LE_HBa0006N17_T7_2961 (trimmed for quality and cloning vector)
AGCTTTAAGTTACCAAGCCAAATTGCAACTTTTCTTTTTCTGTTTCTAGTCAATAGGACACTGATGAGAACATCCATGTGAATTTTTTTTTCTTAGACTT
CCTTGCAGTATCATCGTAAGCTGATTATGAATAGCATGCTGAAAATATGTCTATCGTATTTTAAGAACACCTCACCTAAAAACAATGAAAATTGGCCAAA
AATGGTGAAAGTCGAGACAACAGGGTTGTGGAAGGTTTGTTTCTCAAGAAAGAAAATATTACATGCCGTAAAAGATGCCCTCTGTATGATACCACGTGGA
AACAGTTGCAATCTGAGGCGAAGGCAGAACAATGGGAAATTACAAAGTGAGAAAAATATCATTTCATTGTCAACTAATCTGTTGAAGAGTCTGTTAGAAC
TGAAAAATTCAATATCAGATTCAGTAAGATGTGCAATAAACATTATAATACGACAGGTACTTGAGAAAAGGGCTGGAATCTACAAATTTACAATTTAAGT
CAGATTGGTACGACTATATCGACTATGTATGTACAGAAGGGGCATGGACAAGCAACTAAATAATGCTCAAGTACAAGATATCAATGAGTAAAGACAGTAC
TGATCACCCATTCAATTCACTTGCACCTCTTGACAGTCGAGCTACAAATATTATGGAGCGGGTATCATTGTGATGGTGTGCAATTGAATCGAACAGAAAC
ACATTCCACGTAGCATACATGTATATTTAGATGAAACCACGAACTCTGCAAAATGACAGTGGACACCAGGTGGAGTTTGGAGGCTCTTCTGCTGCTATGA
AAGAGGTTGGTACATATG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.964821
Expected error %
0.168122
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0006N17
Clone
Clone name
hba-6n17
LE_HBa0006N17
P006N17
Clone type
BAC
Contamination
none
Estimated length
45,832
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found