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Clone Read LE_HBa0104D04_SP6_33558

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0104D04_SP6_33558
Primer
SP6
ID from Seq. Facility
LE_HBa_104_D04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
771 trimmed for vector and quality, 871 raw
Genbank Accession
Sequence
>LE_HBa0104D04_SP6_33558 (raw untrimmed)
GGCCCGATGATTTTTAATGGATTAGGCAAGCTATCGAAGTGGAATAATTTGCTTAATTTATGTCAAGCTTATTAATGAAGTGAACGTACACTATCATAAA
CTTATATTGGTTATTAAAGACTGTCAATATTATTAAATGTCATTGTCATATTTCATTATTTTTATATTATTCATGTCATCAACATACAAGATAACAATAA
CAATAAAAATAAAAATTATAGCATATCGTCAATTTATACCTACAAGTGAAACCAAATATAATAGGCATAAATTCGATAAACTCTACTATTTTACTTCAAA
CCTTATATTTATATTAAACGTTCTAATTTTATAAACTGAAAATTCTAATTTATCTCCGATAAAGACATCATCATTTATATTTGATTCTTTCCCATTAGCA
CTAAATTCCACTAAATCTTCTTTTAATTTATAAAACTGGAAATTTTAAAAACCTTCAGGGAATATTATTATTTTTCCTTTTTGTAAACAGTGTGAATGAA
AGTTTTATTTCTGTGGTAGAGAATAAAATAAGCAGTTCATTATCAATCATTCTATATTTGATTAGAAAATAACGTATTATTTATCATTATTACACTAAAA
TAAGTCAATTGTTCCCCACCACCACCTCCTCAAATGATTCCAAATAAATGGTCTCAATTAGGTTCTTCCTATTCTTTACTTAATCATATATACTATGCTA
GTACGAACATTCTATCTGTCTACAACACCCTAAATTTACATCAGTAATCAAATATTTTTCTTTACAAAATAATAAATAATCATAATTACAAATCTTAAAT
GTATTTGAAAGTTCTACATGAATAATTTGTTGTTGATTAATGATAAAAATCTTGCCTAGTGGCATTCTTTN
>LE_HBa0104D04_SP6_33558 (trimmed for quality and cloning vector)
GGCAAGCTATCGAAGTGGAATAATTTGCTTAATTTATGTCAAGCTTATTAATGAAGTGAACGTACACTATCATAAACTTATATTGGTTATTAAAGACTGT
CAATATTATTAAATGTCATTGTCATATTTCATTATTTTTATATTATTCATGTCATCAACATACAAGATAACAATAACAATAAAAATAAAAATTATAGCAT
ATCGTCAATTTATACCTACAAGTGAAACCAAATATAATAGGCATAAATTCGATAAACTCTACTATTTTACTTCAAACCTTATATTTATATTAAACGTTCT
AATTTTATAAACTGAAAATTCTAATTTATCTCCGATAAAGACATCATCATTTATATTTGATTCTTTCCCATTAGCACTAAATTCCACTAAATCTTCTTTT
AATTTATAAAACTGGAAATTTTAAAAACCTTCAGGGAATATTATTATTTTTCCTTTTTGTAAACAGTGTGAATGAAAGTTTTATTTCTGTGGTAGAGAAT
AAAATAAGCAGTTCATTATCAATCATTCTATATTTGATTAGAAAATAACGTATTATTTATCATTATTACACTAAAATAAGTCAATTGTTCCCCACCACCA
CCTCCTCAAATGATTCCAAATAAATGGTCTCAATTAGGTTCTTCCTATTCTTTACTTAATCATATATACTATGCTAGTACGAACATTCTATCTGTCTACA
ACACCCTAAATTTACATCAGTAATCAAATATTTTTCTTTACAAAATAATAAATAATCATAATTACAAATCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.888463
Expected error %
0.250743
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0104D04
Clone
Clone name
hba-104d4
LE_HBa0104D04
P104D04
Clone type
BAC
Contamination
none
Estimated length
135,095
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found