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Clone Read LE_HBa0206B16_SP6_369474

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0206B16_SP6_369474
Primer
SP6
ID from Seq. Facility
LE_HBa_206_B16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
15 trimmed for vector and quality, 952 raw
Sequence
>LE_HBa0206B16_SP6_369474 (raw untrimmed)
ATAAATTTTGTCTTCACATATGTGATTGAAACATTCCTCTTGTGTCTGGGAGTTGGCAAGTTATGATAATTTTTCATACATTAGAAAACTAACATGTAAA
ATGATTCGCCAAATGCATCCTTTACGCGTTTGATATTGTTTGTTGGTTAAAAAACTGATTTTCTTTTATATTAAAAAAAAGAAGGAACTAAAGACAAAAA
AGATGATAGATTTTGCAAAGATTAATCCAGAATAAATTATATTAGTAATATGCCCATTATGTGTGTAGACACACTCAATGTTGCATTCATGCAACACAAG
CCAATCAAATTTTTCCTAACCAAGTCATGTTGTGATTAGAAAATTCTTTTAAAAAAAATGGTTTATCGATATCATCCGACATATTTTTTGAAATATTAAT
ATTTCTGTCGTTTAAAAATCAACATATATATATTACTTACTCAGCGAAAGATTAAATAAAATCACATGACACAATTATATCAAGTCCATATTTAATAAAT
AACGATCGACAAATAAAATTATGATACGTATATATACGTTATTCTTTAGAGTATTTCAAAACAATCTTTTCTTTCGAAATGAAAAATTATATGTCCAGAC
TCTATAATTTTATCATGAGCATAAAATAAATTATTTATCTCCAACATCCAACCTGTTTTCTGAAAATTGTAAAGGCTTATGGCAACCCCCCAATTCTGCT
GGATATAAAAACCTTTGCCCCCCTGTATACTTCAATGGCTACAAATTCCAAAAAAAAAATTTTATTTGGGGAACAAAACTGCCAGAAGGATAAAAAGGCG
GGGGGAATGTGATTACCAATAAATTTTTTGGTTGAATAAAAAAATCCCCCCTCCACATAAAATTTTAAAAATATATATTATCTCTCTAATTCTAAGTGTT
TTATAATATTTCTTTTATTTTTAAATCCCCAGGGGTGATCCTGGTCATTAAC
>LE_HBa0206B16_SP6_369474 (trimmed for quality and cloning vector)
GAAAACTAACATGTA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.409831
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0206B16
Clone
Clone name
hba-206b16
LE_HBa0206B16
C10HBa0206B16
P206B16
Clone type
BAC
Contamination
none
Estimated length
118,023
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found