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Clone Read LE_HBa0211D08_T7_372627

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0211D08_T7_372627
Primer
T7
ID from Seq. Facility
LE_HBa_211_D08-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1800 raw
Sequence
>LE_HBa0211D08_T7_372627 (raw untrimmed)
TATATGAGAGGTGTGTGGATAAATATAGTGTCAGTTTGTGATAATGTAAAAGTGTTATTTTATATATGATGTGAATCGGTTTGTTATGTAGATAAGTATA
GTATGTATATATAGATAATTAATGTATATATTAATTTATGGTAATAATGGGAGGTGATAATTGTAAGTCATATGTTAAAGTGTAGTAAGTAGTATAGTTG
TGTATATATTATATGAAGAATTGAGAAATTGAAGTAAAGAATATAGAATAGTAGTTATGAATGTGAGAAAGAGATGATAGTTTCGGGATATGAATGAAAA
TAGCTTGTTATGATAGACATATGATTAATATATATTTGTATAATAGAAGAGGATATGTTAGGTAACATAATGTATGTGAGTGTATAGTAAAAAAGAGAAT
GGAGATATGGTATAATAGAATGATAGTTAGAGTAAAGTTGTATTATGTATATTTGAGTGAGTAGATTGTGTTCGTTTATTTGTCTAGTAGTGTATACATA
TGTAGTGGTATGTTATTGAAGTATATTAGATTTTGAATTTATGTTAAATAGATAAATTTAGATTAGTGTTGTATAATTGTGTGTATATATGTAATAGGAG
GTAAAATGGTAATAAGGATAAGATGTTAATGAATTTGAATAAAGTGTGAGGTATGTACATTTATTTTAAATGAAATGATAAGATGATGGTTAGAATGGGT
GTATATGTAAATGGAATTTTGAGGTAATATTAAGGATGAATATATAAGTATTAGTAAGTATTTAGGAATTATATATAATGGATGGTTTTTTTTACAATGA
TTGTATTATATGATTAATATATTAGTGAAATATGATTGTATTTTTAATTATGTTAGTGTTTTATGGATTGTGATTAAATATTTGTATGTTTATTATGTAT
AATGTGTTATTAACCCGCGATGAGTGATGTTATAGCATTGTACAGTATGTAATTTTTGATAATATAATAATAAAAGAATAATTATGGTGTATAGGATTAA
TATGATTATGATGTACATGTGTGTATACATATGAAATGTTATATTTATTGGTATGAATGAGATAATAGTATTGTTTATAGAAATAAGGTTGAATATTTTA
ATTAATTATAGTTTGATATATTAGATAGTGTATGTGTGGAGATAATAGATTAAATGATTGATTGTTTGTGGATATAATAGGTAGTTGAAAAGTTGTTTAT
GAGATGATTGGTGAGAAGTGACATATGATTGTATATATAAAATAATGTATATAAGAAATATAGATTGAATAATGTAATATTGAGATAAATTAGAAGAGAT
GATGATTATTAATAGATGTAATTGAATGTAAAGTATAAATATATATGTGTATATGTATATATTTTGTATATATAGAATAGATGGTTGTATAATTATAGTA
ATGATGTATGACTATAATGTTAGTGAATAAGAGTAATGGATTTGTCAGAAGATGATAATATATTGGTTATGATGTATTGTGGATAATGATTATAATTATT
GTTAATGTGTAATATATATTATTTATCAGTTAATTATAGTATGAGTTGTATAAAATATTGTGTGGTTAGATATTGTTAATTATAGATTGATTTGATACTA
TTATGTATATGTGTGAGTTATGTAATGTGTATATAGATGTATATAATTAGGATATGATAATAGTGTTATATATGATTNGAGTTGTGGAGATAGTGTTTAG
TAAATGATTACGATTAATATGATGTATATATTATATTGGATTATTGTTGAATATAATTAGGTATTTGAATGAATGTAGATAGAATAGATTGGAGATTGGA
>LE_HBa0211D08_T7_372627 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0211D08
Clone
Clone name
hba-211d8
LE_HBa0211D08
C12HBa0211D08
P211D08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found