Clone Read LE_HBa0211K01_T7_372949

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0211K01_T7_372949
Primer
T7
ID from Seq. Facility
LE_HBa_211_K01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
18 trimmed for vector and quality, 899 raw
Sequence
>LE_HBa0211K01_T7_372949 (raw untrimmed)
NGGTCCCGACGGACGGGGATCTNAGAGTGACCTGCAGGCATGCAAGCTTGCAAACTGAGAAATGTTTGCCCCGTAAAGGGAACAACAACTGTAGGGGCGG
GGTTGGGGTAACATTTGGGGGATATGCATATGTTTGAGATGACGTATAGCCAACTTCATGACATAAATATACTTGATATTTTAACATTTACAAAGACCAC
TTATTTTACTTCATAATAAATGGCACACCAACTTTAATCTCCAGCCATGCTTTTGAGGCTCTTAGCACCTTGAGTCATTTGAGAAGGTACATTCATCAAT
TATCATGCACAGTTGCATATGGATAAATATCAAGAATGAAGCCTGGTCCGTATTAGGCCTTCCTAGAGATATGCATAACAGTGACATTCTAACCTCTTTC
CTTTGCTGTAGCAGATTTTCTATCAAGACAAGATCTCTGGTCGAGCAATTAACAAGTCATTGCCTTTCGAAGATTTTCGTTATACCACCATTTATACTTG
CTTGGGAGATTAATCACATCACATTTAAGGATACAAATTTTTTTATGTATAGAAAACGAAAAGCTTCCAATCTGAGAGACATGCAATTTCAAACACAAAA
CCCCACTATAGACATAGCATAAGAAAGAGTTTCGTTAACAATTTAATACCTCCTTATCGTCATGACGTAATACGGCATCACCTCGATATCCCTGCTGATC
AACAGGGCGTCTACCGCACGACACTTTTCCCTACTTCTACACGCACACCCTCGCAATTGCCCATTATTTACCTTCTAGCGCCAATTCTTCGCCCCAAAAT
CCGAACATTTTTCGGATCAACCCTTAGAATTAATGACCCAAAACCAAATGGCGGGGAAATCCCACAAAAAACCTTCGAGGTGCTGGAGGATTCAATCCC
>LE_HBa0211K01_T7_372949 (trimmed for quality and cloning vector)
CCTGCAGGCATGCAAGCT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.348051
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0211K01
Clone
Clone name
hba-211k1
LE_HBa0211K01
P211K01
Clone type
BAC
Contamination
none
Estimated length
131,127
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found