Clone Read LE_HBa0218D16_T7_394328

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0218D16_T7_394328
Primer
T7
ID from Seq. Facility
LE_HBa_218_D16-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
659 trimmed for vector and quality, 877 raw
Sequence
>LE_HBa0218D16_T7_394328 (raw untrimmed)
GGTCGGGGTCTCTGAGTCGACTGCAGGCATGCAGCTTTGTATGGTGAAAATCGGAAGTGCAGACCTAAGTGAAAATGCTACTAGCAGTCCAGGCAATAGG
ATGTCACCAAAGCCGATAATGCTGTAACCACCCCATGGATCAAATAGTCGTGGAATCTTCAGCAGCATTGGAATACCATCTTCTCCACTTTTATCACCAC
GAGCTACCTTCAAAGACATGGAAAATTCAAATTTACTGACTTATATCTAAAAACAACTCCTATCGTCCAGTAATCCTAAATGAATAACTACCACAATCCT
CACACTTTCATGGAAGAAACTCTGAAAAGCAAATACCCAAAATATGTCCTAAATGAAGGCGCAACCCAAAAGAACTGAACCAACCTGATATTTAATACTA
GTTAATATTTATATGAGATGACAAGATCATAGTAAAATCTGTGCTGTAAAAGAGACACGTCAGTAGAGTGAGCATCAATATGCGGCAATTAAGATAATAA
ACACCCGAAGCAGTGACCTTCGAACAACTGAAGAAGAAAATCTCTCAAAAAAATTTTGTTGATTTTTTATAAACAAACTTGCCCACTATTTCTAGTATCA
ATCCTTGAACTACGGTTGAAAAATAAACATTTTGTTAATGTAATAACAATGCTTGCTTCTGTGTGTGTATGTTCTTTGTGCCACTACAAAGAATATGCAA
CTTACGATAACAAGTAAAAAGAAGTCACCCACTTTAAACAAGCCTGGCGGTGAGATAAATTACAAGATGAGATCAACTGAACCTATTCCTGCCCGGGAAA
AAAAACCCGTCCCCTTAAATTTTGGGTGGTGAGAATGTTCCCCTCGCCATAAGAATCCGCCCCAATTTCTAAAAGGA
>LE_HBa0218D16_T7_394328 (trimmed for quality and cloning vector)
CTGCAGGCATGCAGCTTTGTATGGTGAAAATCGGAAGTGCAGACCTAAGTGAAAATGCTACTAGCAGTCCAGGCAATAGGATGTCACCAAAGCCGATAAT
GCTGTAACCACCCCATGGATCAAATAGTCGTGGAATCTTCAGCAGCATTGGAATACCATCTTCTCCACTTTTATCACCACGAGCTACCTTCAAAGACATG
GAAAATTCAAATTTACTGACTTATATCTAAAAACAACTCCTATCGTCCAGTAATCCTAAATGAATAACTACCACAATCCTCACACTTTCATGGAAGAAAC
TCTGAAAAGCAAATACCCAAAATATGTCCTAAATGAAGGCGCAACCCAAAAGAACTGAACCAACCTGATATTTAATACTAGTTAATATTTATATGAGATG
ACAAGATCATAGTAAAATCTGTGCTGTAAAAGAGACACGTCAGTAGAGTGAGCATCAATATGCGGCAATTAAGATAATAAACACCCGAAGCAGTGACCTT
CGAACAACTGAAGAAGAAAATCTCTCAAAAAAATTTTGTTGATTTTTTATAAACAAACTTGCCCACTATTTCTAGTATCAATCCTTGAACTACGGTTGAA
AAATAAACATTTTGTTAATGTAATAACAATGCTTGCTTCTGTGTGTGTATGTTCTTTGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.954894
Expected error %
1.58586
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0218D16
Clone
Clone name
hba-218d16
LE_HBa0218D16
C08HBa0218D16
P218D16
Clone type
BAC
Contamination
none
Estimated length
102,335
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found