Clone Read LE_HBa0223A12_SP6_399968

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0223A12_SP6_399968
Primer
SP6
ID from Seq. Facility
LE_HBa_223_A12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
658 trimmed for vector and quality, 957 raw
Sequence
>LE_HBa0223A12_SP6_399968 (raw untrimmed)
NGGGCAGTTTTTTCCTCTTTATAAAGATGATCTCATTAATTTATGCTAAGGCAAATTTGCAGTAGCTTTATAGCGAGCATTAAAATGTAGCTACTGTTCT
GTAGTCTTCTGCAAAGTGGCTATTTGTCCATTTTTCCCTCTATCTAGTGTTCGTAGGAAGAAGAGATGTTTGCATATCCCTCGTCAAGGATGATAATATC
CTTTGATCTTTACCTGTTACCTGACCAGTCCATCCATTCATTGGTTACATTGTGCCCCTGGTTTCAGAATCAGATACTCAACCCTTTTGAATGTCTGAGT
TCATCACTGACCATTTTACATCTTTTAGTATAACCCAGCATAATGTTCAACATACGCATTTTATGCTTGTTTGTCGTTTCTTTTTTCAGCTGACTAATTT
GTAATTCTATGCAGGCATGTTTTGAAGGCAATCCATTTAAAACGATACCGGGGCCTTTCAAGCTATTCTGGCGGTGCATGCGTTCTAAGCCTGGGTAAGC
TTCAAGACTTCAATTATTATTCCGTAGATCAGCTGTGAAATAATTGACATTGAAATAATTAGTCTTATCTCATTATATGTCATCAAACACAGCCTTACAG
CAAACCATCTTCTAATAGATATTACAGTTTAAATAAAATGATTGATGAAAACATCTCTTGTTACTCTAAGTTATGTGTTGGCTTACGTTTTCTTTTGATT
TATCTATAAGAGGTATTCGCTTACATTTTCTATTGATTTATCTACTAGAGGTACTGTAGTAAAGTTGAACATCTTAAACAATTAGTCTTTATAGAAATCC
CAATAATCGGCTACTTTTATCTAAAAATACATACTCCTGAAGGACTACACCCACATAATACCAAAAGGGTTTCAAAATTGGGAGCCCACCCCAAGTTTTC
AGGTTTTGAAAATGGATGAACTTCGTTTGTTCCTTTCTGACCTTTAAAGTGGACAAA
>LE_HBa0223A12_SP6_399968 (trimmed for quality and cloning vector)
AAAGATGATCTCATTAATTTATGCTAAGGCAAATTTGCAGTAGCTTTATAGCGAGCATTAAAATGTAGCTACTGTTCTGTAGTCTTCTGCAAAGTGGCTA
TTTGTCCATTTTTCCCTCTATCTAGTGTTCGTAGGAAGAAGAGATGTTTGCATATCCCTCGTCAAGGATGATAATATCCTTTGATCTTTACCTGTTACCT
GACCAGTCCATCCATTCATTGGTTACATTGTGCCCCTGGTTTCAGAATCAGATACTCAACCCTTTTGAATGTCTGAGTTCATCACTGACCATTTTACATC
TTTTAGTATAACCCAGCATAATGTTCAACATACGCATTTTATGCTTGTTTGTCGTTTCTTTTTTCAGCTGACTAATTTGTAATTCTATGCAGGCATGTTT
TGAAGGCAATCCATTTAAAACGATACCGGGGCCTTTCAAGCTATTCTGGCGGTGCATGCGTTCTAAGCCTGGGTAAGCTTCAAGACTTCAATTATTATTC
CGTAGATCAGCTGTGAAATAATTGACATTGAAATAATTAGTCTTATCTCATTATATGTCATCAAACACAGCCTTACAGCAAACCATCTTCTAATAGATAT
TACAGTTTAAATAAAATGATTGATGAAAACATCTCTTGTTACTCTAAGTTATGTGTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957492
Expected error %
0.489739
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0223A12
Clone
Clone name
hba-223a12
LE_HBa0223A12
C07HBa0223A12
P223A12
Clone type
BAC
Contamination
none
Estimated length
81,276
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found