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Clone Read LE_HBa0239H21_SP6_400274

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0239H21_SP6_400274
Primer
SP6
ID from Seq. Facility
LE_HBa_239_H21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
353 trimmed for vector and quality, 993 raw
Sequence
>LE_HBa0239H21_SP6_400274 (raw untrimmed)
GGTGAAATCCACTAATCTTTAATGAACGCTTGGAACCTTCTTCTTTTTACTCTCTTGAATTTTTCCCTAACTTTTAAATGTTTTCTTATGAATGAAAACT
TATCTCAATCAGTTTATACCCCTATTTGGTGAGAAAATTCTTACACTTAGTGGGGGTAAGGAAAATACCAAAATATCTCTCCTTAAAATGGATGAACAAA
TAGAGAGTCTACACTCTAACAAACATAACTCCTTCATCCAAATTTGAAATATAGAAAACTCAGTGGTGTTTCAAAGAGGACTCAACGACCTTCGATTTGA
TACCTTGTGTGCTACCTAATATTTTATATGCTAAAATTTATGGTTGTTTAAAATTGACCCAAAACTAAAAACTGATGTTGAGGTTGTGTGAATCCTTAGT
TGACTTTTCAAAGTACGAGATGTTACTAATCTCCTACTTCCATGAGCTTATTAAAAGCTCCTGCAGCTATAACTGGGTGTTTTCGGGAGGCATGGGAATG
TTGAATTTTGTGAAAATTGGACCTTAAAACCCGTATTCTTTTTTGGCCAAACCTTTCTCCGGTGCCTTCCCTCCCTGGCAAAAAGGTACATGAAGTAGAC
TTTTGTTTCCCAAATTTTTGTTGAAATATAACCCCCCTATTCCTTTTTAAGGGGGGAAGGGAAAATACCCCTTTATTGGATACAAACTATCCCCTCTTTT
TCCTTTTGATTTCCCCGTTTCTTAAAAGGCCCATATTTTCTAAACTTATATCAGGGGCAGTTATCTCAAAAAATTTCCCAATTTCCTCGAAAAAATTTTT
TTCTAACCAAATAAAAGGTAATTTTTTAAAGGTTTCCTGGGTTTGGGGATTTTTCAATTTGACAAATATATTTATTTTCTTCTATCTAAAGATTGTACCA
TCTAAGTCCATTATCATAATATGTTTTTTGTTTTTTCCAGTTTAAAATATTCCTGATATTAAAATATTAATTCTCCTCGTTGTAAGGTAGGTA
>LE_HBa0239H21_SP6_400274 (trimmed for quality and cloning vector)
CCACTAATCTTTAATGAACGCTTGGAACCTTCTTCTTTTTACTCTCTTGAATTTTTCCCTAACTTTTAAATGTTTTCTTATGAATGAAAACTTATCTCAA
TCAGTTTATACCCCTATTTGGTGAGAAAATTCTTACACTTAGTGGGGGTAAGGAAAATACCAAAATATCTCTCCTTAAAATGGATGAACAAATAGAGAGT
CTACACTCTAACAAACATAACTCCTTCATCCAAATTTGAAATATAGAAAACTCAGTGGTGTTTCAAAGAGGACTCAACGACCTTCGATTTGATACCTTGT
GTGCTACCTAATATTTTATATGCTAAAATTTATGGTTGTTTAAAATTGACCCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.924899
Expected error %
0.367737
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0239H21
Clone
Clone name
hba-239h21
LE_HBa0239H21
P239H21
Clone type
BAC
Contamination
none
Estimated length
114,560
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found