Clone Read LE_HBa0223D16_T7_400295

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0223D16_T7_400295
Primer
T7
ID from Seq. Facility
LE_HBa_223_D16-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
16 trimmed for vector and quality, 1070 raw
Sequence
>LE_HBa0223D16_T7_400295 (raw untrimmed)
TCTTCTTTAGTGACCTGCAGGCATGCAAGCTTATTTATGGGCAGGGTGTTGAACCCCTTTCATGAAGTATGTTGGATACCAGATATGTGCTAATGAAACT
TCAAATGTATGTGATTTAGTGAGGGATTTGTTATTTTAAGCAGTCCTAGTGTTAATTTTCTAGAATGAATGAACGTATTAAGGTTTTTATCCATGTTCTA
AACTAAATAGTTCAATGTTACAAAGGATTAGATGCAGATAAATGTTCCAAGATCACTAGGTACAATGATATGTAGTATAGGCTATGTTTCAAGTGTGATA
TTTAAGGGCTTGCCTGATACTAATGAAATATCTTTAGGAAAATGGTATTATGACTTTTACCGTAATATGAGGGTTGTATGAATAAGCAAATGTACATGCG
AATGACTTAGGGTGAGTATACTAATAATCATAGATACGGCCAAGAACTCCCATATTTGTTCCGATCGATAAGCTCCTAAATTTACATATGGAACTTTGCA
TTATCACTTTCAACTGACACCAATATTAGATATTTAATCAATGCTGTAATGTTTTCATTTAAGTGGGATAGAATTTTCCCATGCTTATTATATACTATAT
GTACAAAAGTAACTTGTTCGCCGCCGATTTACTATTACTTTTTAATTTTATAAGAAATTCTCGAATTTAAAATAAATTCTTTGTCTCTCAAACAAGTCTT
TGTAAATCTTTCTCTCGATTATGCCTTCACAATGTAAAGAAGTATATGTTCTTCTGGTCCATAACATGAATTAGCTCGCTTAGATTCTATATTAGTCTCT
CTAATAGTTTACAAGCAATTTTCTTTTTATTTACGTAACCAAGATGATATATTGGTGGCATGTATTTCTGACCATCTGATAAGAGGCTCTTTAGCATATT
GAAACTCAGGGAGTTTCATTCCATCTTTAAAGATTTTCTCCATCCTTACGATTATTTTACTCCCTATTATGTACCTTATTTGGATCCTTATGTGTTATAT
GGTTCTCTTCAGTAAGGCTCTTTCTTGACATTTTGAGGAGACTCGCCTACTCACTTTAATGGTTTTCTTA
>LE_HBa0223D16_T7_400295 (trimmed for quality and cloning vector)
CATGCAAGCTTATTTA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.628164
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0223D16
Clone
Clone name
hba-223d16
LE_HBa0223D16
P223D16
Clone type
BAC
Contamination
none
Estimated length
88,826
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found