Clone Read LE_HBa0231M08_SP6_407443

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0231M08_SP6_407443
Primer
SP6
ID from Seq. Facility
LE_HBa_231_M08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
818 trimmed for vector and quality, 858 raw
Sequence
>LE_HBa0231M08_SP6_407443 (raw untrimmed)
GCCNNCCATACGGNTNNGNTTGNTGATCAATTNGGGNCTGCCTATTAATTTAGTCTCGCTAACATCAAACCAACCAACAGGTGATCTGCACTTCCTCCCA
TATAAGGCCTCGTACGGTGCCATCTGGATACTAGAATGGTAGCTATTATTATAGGCAAACTCAATGAGCGGCAAGTGGTCATCCCAACTACCTTTGAAGT
CAATAATACAGGCCCTCAACATATCTTCTAGTGTCTGAATAGTACGCTCAGCCTGCCCATCCGTCTAAGGGTGAAATGTTGTGCTAAGGTTGACCTGTGT
CCCCAATCCCTTCTGAAACAATCAAAAGTTGGCTGTAAATTGAGCTCCTCTGTCTGATATAATGGACATAGGAACCCCATGAAGTCTCACTATCTCCCTA
ACATATAACCTCGCATAATCTTTAGCCGAATAAGTAGTCCTGACTGGAAGAAAATGGTCTGATTTCGTCAGCCTATCTACAATAACCCATATAGAGTCAT
ACTTCCGTTGAGTGCGAGGTAAGCCTGTAATGAAGTCCATATTAATCATCTCCCATTTCCAAGTCGGGATCTCTATCTCCTGTAATAATCCACCAGGCTT
TTGATGTTCGATCGTGACTTGTTGACAATTCGGGCACTGAGCAACAAACTCCGCAATGTCCTTTTTCATGCCATCCTACCAATATAAGCATCTGAGGTCA
TGATACATTTTTGTTGACCCTGGGTGAATAGAATAAGGGGCAGAGTGTGCCTCTCCCATAACCTGCCGTCGTAGCCCCGCAGTATCGGGTACACACAATC
TGCCTTCATATCGTAACACTCCGTCAGGTGTAACCTTAAATGGGGTCTTTTCCTTTTT
>LE_HBa0231M08_SP6_407443 (trimmed for quality and cloning vector)
CTGCCTATTAATTTAGTCTCGCTAACATCAAACCAACCAACAGGTGATCTGCACTTCCTCCCATATAAGGCCTCGTACGGTGCCATCTGGATACTAGAAT
GGTAGCTATTATTATAGGCAAACTCAATGAGCGGCAAGTGGTCATCCCAACTACCTTTGAAGTCAATAATACAGGCCCTCAACATATCTTCTAGTGTCTG
AATAGTACGCTCAGCCTGCCCATCCGTCTAAGGGTGAAATGTTGTGCTAAGGTTGACCTGTGTCCCCAATCCCTTCTGAAACAATCAAAAGTTGGCTGTA
AATTGAGCTCCTCTGTCTGATATAATGGACATAGGAACCCCATGAAGTCTCACTATCTCCCTAACATATAACCTCGCATAATCTTTAGCCGAATAAGTAG
TCCTGACTGGAAGAAAATGGTCTGATTTCGTCAGCCTATCTACAATAACCCATATAGAGTCATACTTCCGTTGAGTGCGAGGTAAGCCTGTAATGAAGTC
CATATTAATCATCTCCCATTTCCAAGTCGGGATCTCTATCTCCTGTAATAATCCACCAGGCTTTTGATGTTCGATCGTGACTTGTTGACAATTCGGGCAC
TGAGCAACAAACTCCGCAATGTCCTTTTTCATGCCATCCTACCAATATAAGCATCTGAGGTCATGATACATTTTTGTTGACCCTGGGTGAATAGAATAAG
GGGCAGAGTGTGCCTCTCCCATAACCTGCCGTCGTAGCCCCGCAGTATCGGGTACACACAATCTGCCTTCATATCGTAACACTCCGTCAGGTGTAACCTT
AAATGGGGTCTTTTCCTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.980555
Expected error %
0.0992401
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0231M08
Clone
Clone name
hba-231m8
LE_HBa0231M08
P231M08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found