Clone Read LE_HBa0053J02_SP6_43826

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0053J02_SP6_43826
Primer
SP6
ID from Seq. Facility
LE_HBa_053_J02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
692 trimmed for vector and quality, 907 raw
Sequence
>LE_HBa0053J02_SP6_43826 (raw untrimmed)
TGGGGCTAGCTTTCCCCCCCATGTTATCCACCCTGTTTTTTTCCATGTAGCATGCACTTAATGTTGCTTCTGCCATTTGCGGCTTTGACCTACTAAATTG
CAGAACGAAATATCTTTCCTAGCCTTAAATTTTGTTCCACCTTGCCTGAGCTTTGTAAGAACAGCCTGTCTTACGTCTTTGACTTTAATTTAATCAAACT
TCTGTACTTAGCATCTGCAGTTCTTTATGTATCCATAAAAGTAGTATCTATAGCTATTAGAAGCAATGGATGATATCCCCTCTAGTATAAATGAACTGAC
ACTTGAGCATGTTCAGCAACCGATGGTGTTTTTGTTGTTTGAGGGATGCATGTAATTACAGTGATTCTGAAACGTTCTCTGTTCTTTGCATTCATTTAGC
ATGATGTCATATGTCTTTCAATGCAACAGCTAGTACACCATCCCAAACTTGTTGGCGTCTGTTCGATGAATCCTCTATGTCCCCTCCCCTCCCCTCTGTT
TGAACCTATTTTACCCTGGTGTGATGTTTCTTTTGATAAACGGTGAACTCTCTATAGAAGAAATTTCAGTTTTTTTTCATAATGAGTGGTGTTTTTTTAT
TCAGATGGTCTTCCTTTCGAGTTCAGAGCCCTTGAGCTTGTTTTGGAGCTAACTTGCTTGTCTCTTGATGCTCAGGTATGCAAAAGACTCTTTTGGTGGC
AGATTGATAACTCTTTTGTGTAATAGACTAGAATATTTGCTGTCCATTGTAGGCATAATATACTAGCTCCAATATGTGTGCCATTATTGCATAATGTGAT
AAATATCTTAAGTCTAGTAGTCTATTAATTGTGTTGAGGGAACAGATGTCTCAGGTTCAAACCCTTTACTTCTTTCCGAACCCTTGGAGGGAAAAGTTAC
CTGGTAG
>LE_HBa0053J02_SP6_43826 (trimmed for quality and cloning vector)
GTTTTTTTCCATGTAGCATGCACTTAATGTTGCTTCTGCCATTTGCGGCTTTGACCTACTAAATTGCAGAACGAAATATCTTTCCTAGCCTTAAATTTTG
TTCCACCTTGCCTGAGCTTTGTAAGAACAGCCTGTCTTACGTCTTTGACTTTAATTTAATCAAACTTCTGTACTTAGCATCTGCAGTTCTTTATGTATCC
ATAAAAGTAGTATCTATAGCTATTAGAAGCAATGGATGATATCCCCTCTAGTATAAATGAACTGACACTTGAGCATGTTCAGCAACCGATGGTGTTTTTG
TTGTTTGAGGGATGCATGTAATTACAGTGATTCTGAAACGTTCTCTGTTCTTTGCATTCATTTAGCATGATGTCATATGTCTTTCAATGCAACAGCTAGT
ACACCATCCCAAACTTGTTGGCGTCTGTTCGATGAATCCTCTATGTCCCCTCCCCTCCCCTCTGTTTGAACCTATTTTACCCTGGTGTGATGTTTCTTTT
GATAAACGGTGAACTCTCTATAGAAGAAATTTCAGTTTTTTTTCATAATGAGTGGTGTTTTTTTATTCAGATGGTCTTCCTTTCGAGTTCAGAGCCCTTG
AGCTTGTTTTGGAGCTAACTTGCTTGTCTCTTGATGCTCAGGTATGCAAAAGACTCTTTTGGTGGCAGATTGATAACTCTTTTGTGTAATAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.951844
Expected error %
0.406218
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0053J02
Clone
Clone name
hba-53j2
LE_HBa0053J02
P053J02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found