Clone Read LE_HBa0059C19_SP6_46596

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0059C19_SP6_46596
Primer
SP6
ID from Seq. Facility
LE_HBa_059_C19-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
655 trimmed for vector and quality, 838 raw
Sequence
>LE_HBa0059C19_SP6_46596 (raw untrimmed)
CTTTTTTATACGTACATNCAATNCTTNNCGTTCTTCTCTTGTATCTAGGAATACGGGCATAACAAATGCACCCGAAAATTCTAAAATGATCAACATTAGG
ATTTCGACCATTCCAAGCCACCTCCGGTGTCATATTTTGAACAGATAATGTAGGACTTCTATTCAAAATATGAATGCGCCAGTTAACAGCTTCAGGCCAG
AAAGCTTTTGGAACACTGCTTTTTGTCAAGAGACTGCGCACCATATTCATTATAGTATGATTTTTGAGCTCACAGACACCGTTTTGTTGGGGCGTATAGG
CTGTTGTCAGTTGCCTTTTAATGCCATTGCTTTCACAAAAATTAGCAAATTCTTGTGAACTGTATTCCCATCTCGATTTGTGCGAAGTACTTTGATTTGG
CTTCCTGCTTCTTTCTCCACCATAATTTTAAAGCTTTTGAAAGTTTCAAAAGCATCAGATTTGTCCTGCAAAAAAATAGACCCATGTATACCGACTAAAA
TCATCAATGAAGGTGATTATGTATCGTTTACCTCCATTTGAAGATGGATTAATTGGGCTGCAAAGATCAGAATGCACCAGCTCCAACACATTTTTGGCTC
TCCATGACTTTCCCTTAGGAAATTGATTACGTTGCTGCTTGCCAACTGCACATTCCTCACATACTTGAGAAGGAGCTGCAATTTGATGGAGGCCACTGAC
CATGTTATTTCGTTGCAAAGTGCTTAAGCCACCAAAGATCAAGTGGCCATAATGAAAATTCCATAACCCCCATGTATCTGGTTACTTTGGCGAAGAAGCA
AGGAAGATTTCCAAACTCTGCAACTGAAGGTGGAAACA
>LE_HBa0059C19_SP6_46596 (trimmed for quality and cloning vector)
GGAATACGGGCATAACAAATGCACCCGAAAATTCTAAAATGATCAACATTAGGATTTCGACCATTCCAAGCCACCTCCGGTGTCATATTTTGAACAGATA
ATGTAGGACTTCTATTCAAAATATGAATGCGCCAGTTAACAGCTTCAGGCCAGAAAGCTTTTGGAACACTGCTTTTTGTCAAGAGACTGCGCACCATATT
CATTATAGTATGATTTTTGAGCTCACAGACACCGTTTTGTTGGGGCGTATAGGCTGTTGTCAGTTGCCTTTTAATGCCATTGCTTTCACAAAAATTAGCA
AATTCTTGTGAACTGTATTCCCATCTCGATTTGTGCGAAGTACTTTGATTTGGCTTCCTGCTTCTTTCTCCACCATAATTTTAAAGCTTTTGAAAGTTTC
AAAAGCATCAGATTTGTCCTGCAAAAAAATAGACCCATGTATACCGACTAAAATCATCAATGAAGGTGATTATGTATCGTTTACCTCCATTTGAAGATGG
ATTAATTGGGCTGCAAAGATCAGAATGCACCAGCTCCAACACATTTTTGGCTCTCCATGACTTTCCCTTAGGAAATTGATTACGTTGCTGCTTGCCAACT
GCACATTCCTCACATACTTGAGAAGGAGCTGCAATTTGATGGAGGCCACTGACCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.967483
Expected error %
0.141896
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
emb|CAB75932.1| Score 223 E Value 3e-57 Identity 17.10% Align. Length 650bp (99.24%) Frame 1
putative protein [Arabidopsis thaliana] pir||T47841 hypothetical protein T2O9.150 - Arabidopsis thaliana
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF25964.2| Score 207 E Value 2e-52 Identity 15.90% Align. Length 614bp (93.74%) Frame 1
F6N18.1 [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0059C19
Clone
Clone name
hba-59c19
LE_HBa0059C19
C04HBa0059C19
P059C19
Clone type
BAC
Contamination
none
Estimated length
108,160
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found