Clone Read LE_HBa0064K06_SP6_49258

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0064K06_SP6_49258
Primer
SP6
ID from Seq. Facility
LE_HBa_064_K06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
732 trimmed for vector and quality, 849 raw
Sequence
>LE_HBa0064K06_SP6_49258 (raw untrimmed)
AAATTCCGGGCTTCCNNTTTTNNGNCTATNGCGAAGAATGGTGAGCAGCAACATGATTATTTTATTAGTCGTGTTAAAAAAACTCACTAATATTTTTAAG
GAAATATCTCATAATATTGATGTGCAAAGATCTAAGAAGACTTCACAACCTTTGAAATGTAGGAGGTTGAAAAATCTATTTCTCAAACACTTTCTACGAT
TATTGAGAAGAAAGAAAAGGAGAAGAAGAAAAAGGAGGAGAAGGAGAAGGAGTAGAAGGAAAAAGAAAAGAATGAGGAAAAGGAGAAGAAGTCAAATGAG
GAGAAGGAGAGGGAGAAGAAGGCAAATGAAGAGAAGGAGAAGGAGAAGAAGGCAAAACAGGAGAAGGAGAAGGAGAATAAGAATAAGGCAAAGGAGATGG
AGATGGAGAGCAGAAGGAAAAGGAGAAGGAGAAGGAGAAGCAGAAAGAAAAAGCGAAAGAGAAAAAGAAAGGGAAGAAGTTTGAAGTTGTCAGTTGTGAT
GTGAAGCGATGATATCAATTTGAAGGTTTTAACATTGACGGTGAGGGTCCAACTAAACTAATGTCATCCTTCTCGCAATGGGTAAAAGAGGGTCTTTACA
AGAATCATGAAAAAGTAAGTAAAGTAAAGCAAGTAAAGTCGTTCAACTATTATTAGAATTTCTTCTTGTTGTCCATTATATAATGATTTATAATGATTAC
ACAATTGCAGAGGAAACAAGGAGGATCACTACTTAGCCAATTGCTCAAAATTTAAATTTGACGAACTTGATTTAGTAGTTGCATTTTTCATGAATAGGGA
CTGGTTCTACGTATTGTCTCATTCCAATAGGTGTTGGAATGATGAAGGT
>LE_HBa0064K06_SP6_49258 (trimmed for quality and cloning vector)
AGCAGCAACATGATTATTTTATTAGTCGTGTTAAAAAAACTCACTAATATTTTTAAGGAAATATCTCATAATATTGATGTGCAAAGATCTAAGAAGACTT
CACAACCTTTGAAATGTAGGAGGTTGAAAAATCTATTTCTCAAACACTTTCTACGATTATTGAGAAGAAAGAAAAGGAGAAGAAGAAAAAGGAGGAGAAG
GAGAAGGAGTAGAAGGAAAAAGAAAAGAATGAGGAAAAGGAGAAGAAGTCAAATGAGGAGAAGGAGAGGGAGAAGAAGGCAAATGAAGAGAAGGAGAAGG
AGAAGAAGGCAAAACAGGAGAAGGAGAAGGAGAATAAGAATAAGGCAAAGGAGATGGAGATGGAGAGCAGAAGGAAAAGGAGAAGGAGAAGGAGAAGCAG
AAAGAAAAAGCGAAAGAGAAAAAGAAAGGGAAGAAGTTTGAAGTTGTCAGTTGTGATGTGAAGCGATGATATCAATTTGAAGGTTTTAACATTGACGGTG
AGGGTCCAACTAAACTAATGTCATCCTTCTCGCAATGGGTAAAAGAGGGTCTTTACAAGAATCATGAAAAAGTAAGTAAAGTAAAGCAAGTAAAGTCGTT
CAACTATTATTAGAATTTCTTCTTGTTGTCCATTATATAATGATTTATAATGATTACACAATTGCAGAGGAAACAAGGAGGATCACTACTTAGCCAATTG
CTCAAAATTTAAATTTGACGAACTTGATTTAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.897754
Expected error %
0.167554
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0064K06
Clone
Clone name
hba-64k6
LE_HBa0064K06
P064K06
Clone type
BAC
Contamination
none
Estimated length
110,289
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found