Clone Read LE_HBa0101D04_T7_56599

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0101D04_T7_56599
Primer
T7
ID from Seq. Facility
LE_HBa_101_D04-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
723 trimmed for vector and quality, 781 raw
Genbank Accession
DU080416
Sequence
>LE_HBa0101D04_T7_56599 (raw untrimmed)
CCCGGGTACCGCGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTAAAGAATGGGAGCATATAATGTGGCTAAAAGCAAATATAGAATGGTTTGA
TGGGCTAAATTTTGACAGTGAAATGTGAGGTAGTTTCTGTTGCAGACAGTATGATTTAACCAGCTCAGTGAGACAATGTGAAGCATGAAATTCTGGAAAT
ACTGGTTTCTCTAGGTATACAACTTTTCTGAATCTTCAAGATTTCATTAGACATTGAGGATGTCAAGTTACATCATCACTACTGTTCTATTTGGGTGACT
ATATTATCTGAGACTAGTGGTTTCTTGTTGCCACTTAACTTGTTTTCCATTTAGTGCATGGGAGCACAAGCCCCAGTGGTGCTTGTAGCTTTGATCCATG
TGTAACTGTATATATGCCTTCACTGGATGTAAGTGTTTTTAGTTGGTCATCTCCTAAAAGGAATCAATGCTGTTTCTTATTTCTGACGGAATTTCTGATT
GTCCAGACCTCCAGGACTCCAGTTGCGGTTCCGTGAACCCCCCCAAGGGTTCTTTAAACATGGACAGAAAGGAGGACACTTTGTTGCCTGAGATCTCCCC
AACTGCTTCTCCTCAGCCCTTTCTCCCTCTTTTGGCACCTTCTCCGTGGGCACCTTTTACAAACAGCACTTTACCAAAATTATCGGGTCTGGTTCAGTAT
TTAATTAAAAATGAAAATCTCTTAGGTCTGAGCAAAAAACAAATTTTAAAAGTTGGGGGCTACTTCAATTTTTAGAGCAAT
>LE_HBa0101D04_T7_56599 (trimmed for quality and cloning vector)
AGCTTTAAAGAATGGGAGCATATAATGTGGCTAAAAGCAAATATAGAATGGTTTGATGGGCTAAATTTTGACAGTGAAATGTGAGGTAGTTTCTGTTGCA
GACAGTATGATTTAACCAGCTCAGTGAGACAATGTGAAGCATGAAATTCTGGAAATACTGGTTTCTCTAGGTATACAACTTTTCTGAATCTTCAAGATTT
CATTAGACATTGAGGATGTCAAGTTACATCATCACTACTGTTCTATTTGGGTGACTATATTATCTGAGACTAGTGGTTTCTTGTTGCCACTTAACTTGTT
TTCCATTTAGTGCATGGGAGCACAAGCCCCAGTGGTGCTTGTAGCTTTGATCCATGTGTAACTGTATATATGCCTTCACTGGATGTAAGTGTTTTTAGTT
GGTCATCTCCTAAAAGGAATCAATGCTGTTTCTTATTTCTGACGGAATTTCTGATTGTCCAGACCTCCAGGACTCCAGTTGCGGTTCCGTGAACCCCCCC
AAGGGTTCTTTAAACATGGACAGAAAGGAGGACACTTTGTTGCCTGAGATCTCCCCAACTGCTTCTCCTCAGCCCTTTCTCCCTCTTTTGGCACCTTCTC
CGTGGGCACCTTTTACAAACAGCACTTTACCAAAATTATCGGGTCTGGTTCAGTATTTAATTAAAAATGAAAATCTCTTAGGTCTGAGCAAAAAACAAAT
TTTAAAAGTTGGGGGCTACTTCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.960711
Expected error %
0.857241
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At1g61900.1 Score 66 E Value 2e-11 Identity 21.30% Align. Length 140bp (19.36%) Frame 1
68414.m06983 expressed protein contains similarity to glutamic acid/alanine-rich protein GI:6707830 from [Trypanosoma congolense]
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At1g61900.2 Score 66 E Value 2e-11 Identity 21.30% Align. Length 140bp (19.36%) Frame 1
68414.m06984 expressed protein contains similarity to glutamic acid/alanine-rich protein GI:6707830 from [Trypanosoma congolense]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0101D04
Clone
Clone name
hba-101d4
LE_HBa0101D04
P101D04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found