Clone Read LE_HBa0101F11_T7_56709

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0101F11_T7_56709
Primer
T7
ID from Seq. Facility
LE_HBa_101_F11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
732 trimmed for vector and quality, 835 raw
Genbank Accession
DU080510
Sequence
>LE_HBa0101F11_T7_56709 (raw untrimmed)
CTCGGGTCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGAAACCCTTTGAGCCACTGCCACCAATGACCCACTTCAAGAATGGCAAGAG
AACTCCTGCCATATCCAGGATAGAGGTGAAAGTATTCTCCAAAATGAGCCCAGCTACCTACATTAGTGAAAGAAAACTAGGATTTGAATGTCAAAAAACC
ATATCCAGGATAGAGGTGAAAGTATTCTCCAAAATGAGCCCCGCAACCTACGATAGTGAAAGAAAACTAGGATTTGAATGTCAAAACACATGTACAAGTT
ACACACCTTGGAACAGAAAAGTTTGGAATAAAACCCGGAAAGATAAAGACACAGAACAGAAAGAAACAAAAAAGAGGTTCATATAGATTCCCCTAAACAA
AATAGACAGACTCTATTCTATGCAGCTTGACCCAGAACATGCTTAATCAACTATACGTAATTGGCAGTGGGAAAACCTCAAAAATAAACTGATCACCTCA
CACATCAAACAGGAAAATCATAAACAAGGAACTTGAATATCAAACAAGAAAACCATAATCAAGGAATATCAATTTGTAGATCATCTAAGAAACGCGGGAA
TCAAGGCATATCAATTTGTGGATCATCTAAGAAACGCGGGATCAACTGATGAATACTAATATAATTACCAAATCTAGATCGTTGGGTCACTCACATCAAA
CCATGGAACTGCATTAAGGGAGATTTTTTTCACTTGGCATGTGGAATTAATGATTTCTGTAATACAAATAAAGATTCTGTTGAACATCCGACCACTATTA
CTTTCTTTTCAAAACCAAACCTCTTCTTGGTTGCC
>LE_HBa0101F11_T7_56709 (trimmed for quality and cloning vector)
AGCTTGAAACCCTTTGAGCCACTGCCACCAATGACCCACTTCAAGAATGGCAAGAGAACTCCTGCCATATCCAGGATAGAGGTGAAAGTATTCTCCAAAA
TGAGCCCAGCTACCTACATTAGTGAAAGAAAACTAGGATTTGAATGTCAAAAAACCATATCCAGGATAGAGGTGAAAGTATTCTCCAAAATGAGCCCCGC
AACCTACGATAGTGAAAGAAAACTAGGATTTGAATGTCAAAACACATGTACAAGTTACACACCTTGGAACAGAAAAGTTTGGAATAAAACCCGGAAAGAT
AAAGACACAGAACAGAAAGAAACAAAAAAGAGGTTCATATAGATTCCCCTAAACAAAATAGACAGACTCTATTCTATGCAGCTTGACCCAGAACATGCTT
AATCAACTATACGTAATTGGCAGTGGGAAAACCTCAAAAATAAACTGATCACCTCACACATCAAACAGGAAAATCATAAACAAGGAACTTGAATATCAAA
CAAGAAAACCATAATCAAGGAATATCAATTTGTAGATCATCTAAGAAACGCGGGAATCAAGGCATATCAATTTGTGGATCATCTAAGAAACGCGGGATCA
ACTGATGAATACTAATATAATTACCAAATCTAGATCGTTGGGTCACTCACATCAAACCATGGAACTGCATTAAGGGAGATTTTTTTCACTTGGCATGTGG
AATTAATGATTTCTGTAATACAAATAAAGATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.937746
Expected error %
0.52175
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At5g20520.1 Score 65 E Value 3e-11 Identity 27.90% Align. Length 110bp (15.03%) Frame 1
68418.m02438 expressed protein
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0101F11
Clone
Clone name
hba-101f11
LE_HBa0101F11
P101F11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found