Clone Read LE_HBa0048E10_T7_63571

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0048E10_T7_63571
Primer
T7
ID from Seq. Facility
LE_HBa_048_E10-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
159 trimmed for vector and quality, 845 raw
Sequence
>LE_HBa0048E10_T7_63571 (raw untrimmed)
GCGGTTTGGGTCCGTTTGTTACTGGTCAGAAAACCTTGGTGAGTTGTTCCCTTTCCGAACTGTCTCCCTCCTGTAAGATGATGTACTGCACCTGTCACCG
CAGTGTTTTCATAATAAACTTGAGAACTGAGAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAATTGGGTTCCCCCGGCCCCCAGGCTTTTCCCTTTTGGGGGGGGTTATTTTTGGTTGGGCCGGGGCCGCCTTTTTAAACCGCC
GGGCGGGGAAAACCCCGGGGGTTCCCCACTTTATTCCCTTGGGAGCCCTCCCCCTTTTCCCCCGTGGGGGTAAAACCAAAAGGGCCCCCCCCGTTCCCCC
TCCCCAACATTTCCCCCCCCTGAGGGGCAAAGGGGACCCCCCCGGTACGGGCCCTTTAAGCGGGGGGGGGGGGGGGGTTCCCCCCAGGGGGCCCCCATCT
TTTGCCGGGGCCCTAGGCCCCCCCTCCTTTTCTTTTTTTCCTTTCTTTTCCGTCCTGTTTCCCGGGTTTTCCCCTTAAGGCCTTTATTGGGGGGGCCCCC
TTTGGGGTTCCGATTTAGGGTTTTTGTGGCTCTTTTCCCCAAATATCTTTGTTGGGGGTGTTGTTCTCCATGGGGGGCCTTCCCCCCTTAAAAACGGTTT
TTTCCCCTTTGGCGGTGGAGCTCCCGTTTTTTTTTAAGTGTGGGCTTGGGCTCCACAGCTGGACCCACCTCCCCCCCCTACCCTCGCTCTTTTTTTTTGG
GTTCAATGGGGTTTTGTGCCCTATTTCGGCGCTCCTGGTTGAAAA
>LE_HBa0048E10_T7_63571 (trimmed for quality and cloning vector)
CTGTCTCCCTCCTGTAAGATGATGTACTGCACCTGTCACCGCAGTGTTTTCATAATAAACTTGAGAACTGAGAAAAACAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

This is probably not a useful sequence.

Problems:
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.649637
Expected error %
0.984565
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0048E10
Clone
Clone name
hba-48e10
LE_HBa0048E10
P048E10
Clone type
BAC
Contamination
none
Estimated length
109,245
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found